These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14078#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 747 fasta sequence [AGCCATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG-GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA-GGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGG-AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTGTCACTCCTTAA-GGTGTGTTCGGAACTCCAAATTCCCAAATG-CTGTAATAAAACGATCAAGAGGAATCCTGCATGGCTGCCTCTTGCTTCCTTTGTGT-ACAGCTTGAC-AGCTTCTGTATATGTACTATGTTCGGTCATAAATATTTAACTTCTATAATATTATTTAGTCAAAATTTTAAAACTAAAAAAAAAAAA] [+] EMBL CF291196 [AGCCATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCCCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGG AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTGTCACTCCTTAA GGTGTGTTCGGAACTCCAAATTCCCAAATG CTGTA ] [+] EMBL AK064264 [ GCCATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGG AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTGTCACTCCTTAA GGTGTGTTCGGAACTCCAAATTCCCAAATG CTGTAATAAAACGATCAAGAGGAATCCTGCATGGCTGCCTCTTGCTT ] [+] EMBL CF292014 [ GCCATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATAT ] [+] EMBL CF339114 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGG AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTGTCACTCCTTAA GGTGTGTTCGGAACTCCAAATTCCCAAATGCCTGT ATAAAACGATCAAGAGGAATCCTGCATGGCTGCCTCTTGCTTCCTTTGTGT caa ] [+] EMBL CF340589 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTAGGGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGNGGG AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTGTCACTCCTTAAGGGTGTGTTCGGAACTCCAAATTCCCAAATG CTGTA ] [+] EMBL CF339563 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGG AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTGTCACTCCTTAA GGTGTGTTCGGAACTCCAAATTCCCAAATG CTGTA ] [+] EMBL CF339178 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATGNGCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGG AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTG ] [+] EMBL CF340730 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTAGGGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGGAAGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTG ] [+] EMBL CF339304 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACTC ] [+] EMBL CF338892 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACT ] [+] EMBL CF338326 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATAA GGACGTGTTCCATCTAGCTAAAAACT ] [+] EMBL CF292226 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGG AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTGTCACTCCTTAA GGTGTGTTCGGAACTCCAAATTCCCAAATG CTGTAATAAAACGATCAAGAGGAATCCTGCATGGCTGCCTCTTGCTTCCTTTGTGT ACAGCTTGAC AGCTTCTG ] [+] EMBL CF340274 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTT ] [+] EMBL CF339719 [ ATTGAGTGTGCCCACTGCGCAGTCTACACACTGCACAGCAACACACATG GCCTCCATCAAACTCTCCCTCGCATGTGTCCTCCTAATCTCAGGCCTCGTGATGCTGGAGAGGATCGAGCACACTGAAGCGGTCTGCACACTGTTCTGCGCTAAAGGGACGTACATCACCTGCAGCAACCATCCATACGAGCAGCTCTACGGGTGCGCCTGCAGATGCGCGCCGCCGGATGGCGTCGACTGCGTCGTCCATCTCGCCGACGGCTCCACGCAGCAGTGCTGATCGGAAAACGCAGGGAAAGGATGGTG ] [-] EMBL CF292225 [ GGAAAGGATGGTGTCGTCGTCGCTCTTCCACTTGCACGTTCTTGTGTGTGTCACTGTATGTGAATTACTTCATCTGTCCTAAAATATAAAGACTTTTAATTGGATGCGATATATTTCAGTACTACGAATCTGAATATACTCGTAGTATTA GGACGTGTTCCATCTAGCTAAAAACTCTTATATTCTAGGACGGGGGG AGTAAGTGGCTGCACGAAACCTGTGTGAGTCGTGTGGCCATACGTGTGCCTCCTTTGTGTCACTCCTTAA GGTGTGTTCGGAACTCCAAATTCCCAAATG CTGTAATAAAACGATCAAGAGGAATCCTGCATGGCTGCCTCTTGCTTCCTTTGTGTCACAGCTTGACAAGCTTCTGTATATGTACTATGTTCGGTCATAAATATTTAACTTCTATAATATTATTTAGTCAAAATTTTAAAACTAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||