These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14107#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2337 fasta sequence [CCTCACCCTCCTTCCTCTTCACTCTCACGAGACAGCTTCCCACGCAGCGCAGCGCAACCGCAGCAATGGCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC-GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG-ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTGGAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTTATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATTACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATT--GA-CATT-CTC-TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT-GTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCG-TTGT-ACAGTGAACCCG-TTAAGATTAATTAGATCAT-CAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTGAGCTTGTCTAATTCTCTTTTGTGACAAAGCTTTGTATCTCACTGCATATGTACAATGCCGTTGGCAGTAAAGATATGCAAATGTGATAC] [+] EMBL AY341850 [CCTCACCCTCCTTCCTCTTCACTCTCACGAGACAGCTTCCCACGCAGCGCAGCGCAACCGCAGCAATGGCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTGGAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTTATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATTACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATT CCAATGCTTCGTATT GA CATT CTC TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT GTGGG ] [+] EMBL AK070537 [ GAGACAGCTTCCCACGCAGCGCAGCGCAACCGCAGCAATGGCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTGGAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTTATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATTACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATT GA CATT CTC TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT GTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCG TTGT ACAGTGAACCCG TTAAGATTAATTAGATCAT CAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTGAGCTTGTCTAATTCTCTTTTGTGACAAAGCTTTGTATCTCACTGCATATGTACAATGCCGTTGGCAGTAAAGATATGCAAATGTGATAC] [+] EMBL CB639821 [ GCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATGNATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTC ] [+] EMBL CB639823 [ GCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGTCGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGGGCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGAC GGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGC ] [+] EMBL OSS3329A [ gcgcgGCGGGAG CCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTGCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGNNACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTNCGNCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGNCTCATCTGAATTCATCCTCTCAATC ] [+] EMBL OSS2838A [ gcgcgGCGGGAG CCTGCNTCACCATCCCCGCGGGCTTNAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAATCGACGGGNTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCCTGAATA ] [+] EMBL OSS3271A [ ncgcgGCGGGAG CCTGCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCACCAACTTCAAGGTTGAACCCTCTCCGACANCTGGTACTCTGAGCATGGCTGCANTTATGAACAAGAGTGCAAATCCAGACATACTTCCTTCGACTAGGGATAAAACATCTGGTAGCACCCATGAAGATGGTGGCTCTCGAGATTT ] [+] EMBL CB672946 [ ATGAAAAATGAAAGCCTGAATACTGCCCTGTCATCTGACGATATG ATGATCGACAATATACCTCTATGTTCTCGTGAGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTTTAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTGGAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTTATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATTACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACAT ] [+] EMBL CB681461 [ ATTGGACCGTTCGCTTGATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTANGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCA ] [+] EMBL AY324393 [ GATGGTCAGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGAGGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAACTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTGGTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGAGACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAATGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTGTAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATGGCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAGGATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAA ] [-] EMBL CB672947 [ ATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATANCCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATT GA CATT CTC TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT GTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCG TTGT ACAGTGAACCCG TTAAGATTAATTAGATCAT CAGAATTTGGTTTTC ] [+] EMBL CA998226 [ AATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATT GA CATT CTC TTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCT GTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCG TTGT ACAGTGAACCCG TTAAGATTAATTAGATCAT CAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTG ] [+] EMBL D42861 [ tggcntcCGTATTTGGANCATTNCCCTTTCAGAAAGATGCTCCTATCATTGACACCTCAGTTGAACCGGAGGCGAGAGCTGTACCTGGTGGGCTCCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGAATTTGGCACTGGCCCTANNACCGTTTGTAACAGTGAACCCGTTTAAGATTAATTAGATCATACAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTT ] consensusID : consensus_14107#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 814 fasta sequence [ATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATTGACATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTAAGGATTAATTAGATCATCAGAATTTGGTTTTCTTCTTAAAGGAA] [-] EMBL CB681462 [ATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAACATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGTCCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTGGCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAAGTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAAACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAGTATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTAGCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACACCGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATTGACATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTAAGGATTAATTAGATCATCAGAATTTGGTTTTCTTCTTAAAGGAA] consensusID : consensus_14107#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 380 fasta sequence [CCGGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAGTGCTTCGTATTGACATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTTAAGATTAATTAGATCATCAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTGAGCTAAAAAAAAAA] [+] EMBL BM418897 [CCGGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGTGAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAGTGCTTCGTATTGACATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTGTACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAGGCCTTGTTGTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTTAAGATTAATTAGATCATCAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAACATGGATTATGGTTGATTTGGTTTTGTGAGCTAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14107#0 CCTCACCCTCCTTCCTCTTCACTCTCACGAGACAGCTTCCCACGCAGCGCAGCGCAACCG 60 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 CAGCAATGGCCGATTCGCCAAACCCTAGCTCCGGTGACCACCCCGCGGGCGTCGGCGGGT 120 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 CGCCGGAGAAGCAGCCCCCGGTGGATCGGCGCGTCGCGGCGCTCGCCGCGGGCGCGGCGG 180 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GCGCGGGGGCGAGGTACAAGGCGATGTCCCCCGCGCGGCTGCCGATCTCGCGGGAGCCCT 240 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GCCTCACCATCCCCGCGGGCTTCAGCCCCTCGGCTCTCCTCGAGTCCCCCGTCCTCCTCA 300 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 CCAACTTCAAGGTTGAACCCTCTCCGACAACTGGTACTCTGAGCATGGCTGCAATTATGA 360 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 ACAAGAGTGCAAATCCAGACATACTTCCTTCGCCTAGGGATAAAACATCTGGTAGCACCC 420 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 ATGAAGATGGTGGCTCTCGAGATTTTGAATTCAAGCCTCATCTGAATTCATCCTCTCAAT 480 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 CGACGGCTTCTGCTATCAATGATCCCAAAAAGCATGAAACTTCTATGAAAAATGAAAGCC 540 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 TGAATACTGCCCTGTCATCTGACGATATGATGATCGACAATATACCTCTATGTTCTCGTG 600 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 AGTCAACTCTCGCAGTCAATATTTCAAGTGCCCCGAGCCAACTGGTTGGAATGGTTGGTT 660 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 TAACTGACAGCTCACCTGCTGAAGTTGGTACATCTGAGTTGCATCAGATGAATAGCTCTG 720 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GAAATGCTATGCAGGAGTCACAGCCTGAAAGTGTGGCTGAAAAGTCTGCAGAGGATGGTT 780 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 ATAACTGGCGCAAATATGGGCAAAAGCATGTTAAGGGAAGTGAGAACCCGAGAAGCTATT 840 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 ACAAGTGCACACATCCTAACTGTGATGTAAAAAAGCTATTGGAGCGTTCGCTTGATGGTC 900 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 AGATTACTGAAGTGGTTTATAAAGGGCGTCACAATCACCCTAAGCCCCAACCCAATAGGA 960 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GGCTGTCTGCCGGTGCAGTTCCTCCAATCCAGGGTGAAGAAAGATATGATGGTGTGGCAA 1020 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 CTACTGATGACAAATCTTCAAATGTTCTTAGCATTCTTGGTAATGCAGTACATACAGCTG 1080 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GTATGATTGAGCCTGTTCCAGGCTCAGCTAGTGATGATGACAATGATGCCGGAGGAGGGA 1140 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GACCTTACCCTGGAGATGATGCTGTTGAGGATGATGATTTAGAGTCAAAACGAAGGAAAA 1200 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 TGGAATCTGCTGCTATTGATGCTGCTTTGATGGGCAAGCCTAACCGTGAGCCTCGTGTTG 1260 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 TAGTACAAACGGTTAGTGAGGTTGACATCTTGGATGATGGGTACCGCTGGCGCAAGTATG 1320 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GCCAGAAAGTAGTTAAAGGAAACCCCAATCCACGGAGTTACTACAAGTGCACAAATACAG 1380 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAA 1440 consensus_14107#1 -ATGCCCAGTCAGGAAGCATGTTGAGAGAGCATCACATGATCCAAAATCAGTCATAACAA 59 consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 CATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGT 1500 consensus_14107#1 CATATGAAGGAAAACATAACCATGAAGTCCCTGCGTCGAGGAATGCGAGCCATGAGATGT 119 consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 CCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTG 1560 consensus_14107#1 CCACTCCCCCCATGAAGCCTGTTGTCCATCCAATTAACAGCAATATGCAGGGCCTTGGTG 179 consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAA 1620 consensus_14107#1 GCATGATGAGAGCATGTGAACCTAGGACATTTCCAAACCAATATTCTCAAGCAGCTGAAA 239 consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAA 1680 consensus_14107#1 GTGACACCATCAGCCTTGATCTTGGTGTTGGAATCAGCCCGAACCACAGCGATGCCACAA 299 consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 ACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAG 1740 consensus_14107#1 ACCAATTGCAGTCCTCAGTTTCTGATCAGATGCAGTATCAAATGCAGCCCATGGGTTCAG 359 consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 TATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTA 1800 consensus_14107#1 TATACAGTAATATGGGACTTCCAGCAATGGCAATGCCGACTATGGCTGGCAATGCAGCTA 419 consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 GCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACAC 1860 consensus_14107#1 GCAATATATATGGTTCGAGAGAAGAAAAACCTAGTGAAGGTTTTACTTTCAAAGCCACAC 479 consensus_14107#2 ------------------------------------------------------------ consensus_14107#0 CGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGT 1920 consensus_14107#1 CGATGGACCATTCGGCTAACTTATGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGT 539 consensus_14107#2 ---------------------CCGGCTACAGTACCGCCGGCAATTTAGTCATGGGTCCGT 39 ************************************ consensus_14107#0 GAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATTGAC 1980 consensus_14107#1 GAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAATGCTTCGTATTGAC 599 consensus_14107#2 GAGAGTCTATACTAATGCTTATAGCTCGAGAATCATATATTACCAGTGCTTCGTATTGAC 99 ********************************************* ************** consensus_14107#0 ATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTG 2040 consensus_14107#1 ATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTG 659 consensus_14107#2 ATTCTCTTCAGAAAGATGCTCCTATCATTGACACATCAGTTGAACCGGAGGCGAGAGCTG 159 ************************************************************ consensus_14107#0 TACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTT 2100 consensus_14107#1 TACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAAAGGCCTTGTT 719 consensus_14107#2 TACCTGTGGGCTGCAGCAAAATACACCACATGGGTCTTCTGGAGCGGCAA-GGCCTTGTT 218 ************************************************** ********* consensus_14107#0 GTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTTAAGATTAAT 2160 consensus_14107#1 GTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTAAGGATTAAT 779 consensus_14107#2 GTATACTTGTATGTGGCACTGGCCCTATATTCGTTGTACAGTGAACCCGTTAAGATTAAT 278 ************************************************** * ******* consensus_14107#0 TAGATCATCAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAA 2220 consensus_14107#1 TAGATCATCAGAATTTGGTTTTCTTCTTAAAGGAA------------------------- 814 consensus_14107#2 TAGATCATCAGAATTTGGTTTTCTTTAACTATCTTCGCCTTCAGTGGAATGTGGATAGAA 338 ************************* * consensus_14107#0 CATGGATTATGGTTGATTTGGTTTTGTGAGCTTGTCTAATTCTCTTTTGTGACAAAGCTT 2280 consensus_14107#1 ------------------------------------------------------------ consensus_14107#2 CATGGATTATGGTTGATTTGGTTTTGTGAGCTAAAAAAAAAA------------------ 380 consensus_14107#0 TGTATCTCACTGCATATGTACAATGCCGTTGGCAGTAAAGATATGCAAATGTGATAC 2337 consensus_14107#1 --------------------------------------------------------- consensus_14107#2 --------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||