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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14109#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1955 fasta sequence
[GCAGCAGACGCAGAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG-TT-GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCAGAATGGGAACACGTGAATACGTGATGCGTGTGCTGGAACA-ACAAGTAGGAGGAATAAAAC-CCATGGATTA]
[+] EMBL CB672157 [GCAGCAGACGCAGAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TTGGGTCTCATTGGCCCTGATCTTCCATTCACGAACACCTACGGTGTGTGGGA ]
[+] EMBL CB659138 [ ACGCCTAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGG ]
[+] EMBL AK072015 [ AGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTT GGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCA ]
[+] EMBL AK066182 [ TCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCGGAATGGGAACACGTGAATACGTGATGCGTGTGCTGGAACA ACAAGTAGGAGGAATAAAAC CCATGGATTA]
[+] EMBL CB636454 [ TCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATTCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTG ]
[+] EMBL CB636426 [ TCCTCCTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGTCGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGGAGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGATGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGGAGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACGTGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGCCCATACCCGATGAAAATTCAATTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCTTATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATG TT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGT ]
[+] EMBL CB653161 [ GCTTCTCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATGATT GGTCTCATTGGCCCTGATCTTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGAGCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAATGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGACGATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTCCTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCATTGTTGCATCTGGGGCAGCATCTGGTAAGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTGTTTGTGTGCAGACTGCATATGGTGTCAAAGTCAAGGTGGAAAACAATCCATATGATCCCAGCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGCAAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAAGAAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGG ]
[-] EMBL CB659139 [ TTGACCTCCTTAAAAAGCGGTTGATGTCTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCAGAATGGGAACACGTG ]
[-] EMBL CB672158 [ CGAAAAGTATACGAGGAGGAATGGTCNTACATTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCGGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGACCGGTTCAACGATGATCAAGCCTTCCCTGCCCTTGTAAAACCATTTCAGCAGTGTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATACCATAGTGAGACCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAGCAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCAGAATGGGAACACGTGAATACGTGATGCGTGTGTTGGAACATCCAAGTAGGGGGAATAAAACTCCATG ]
[-] EMBL CB653162 [ AGCAAGTATGGTGCATCCTGCAACCGGATAGTCGGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGATATCTTGAGAAACGGTGTCTACCCTGGAGAATATTTGCGTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAAGGTCTACGATCATTTTTCCTTTTTGGGCTGGGTTTGATAATCCACATGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGATTTGTTCAGTGGATCTCATACTTTTTGCATTCTTCATGTTCACAATTGCGCCGAACCAAATGTGAATGACCCTTGTCAGACATGTCCTATCTGATCCGACCGGTTCAAGGATGATCAAGACATACTTGCCCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATG TTTAACAACAAAACATTGCAAGGATTTTATGCATGAATTT ]
[-] EMBL CB636427 [ GATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTATGCAGAATGG ]
[-] EMBL CB636455 [ CCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATTTCATACTCTTTGCATTTTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATTTCCTCTCTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCA ]
[+] EMBL CB682375 [ ATGACCTTGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAGAATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATA ]
consensusID : consensus_14109#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 685 fasta sequence
[CCTACATTCCTGTGNGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCAGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGACATCTTGAGAAACCGTGTCTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAAAGAATACTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAAAAAAAAAAAA]
[-] EMBL CA763005 [CCTACATTCCTGTGNGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAGCAAGTATGGTGCATCCTGCAACCGGATACTCAGTGGTTAGATCATTGTCTGAAGCTCCAAGATATGCATCTGTGATATCTGACATCTTGAGAAACCGTGTCTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAAAGAATACTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCATGAATTTGGCAAAAAAAAAAAAA]
consensusID : consensus_14109#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence
[CATTTGGTCGGCCACCAAGTTTGTTGCATCTCGCAACCCGGATACTCAGTGGGTTAGATCATTGTCTGAAGCTCCCAAGATATGAATTTGTGATATTTGCCATCTTGAGAAACCCTGTTTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTTTTCAGTGGATTTCATACTCTTTGCATTCCACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATTTCCTTTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAGAGAATACTTGGAAATGTCCAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGGGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACCCTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTGTGCAGAATGGGACCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA763004 [CATTTGGTCGGCCACCAAGTTTGTTGCATCTCGCAACCCGGATACTCAGTGGGTTAGATCATTGTCTGAAGCTCCCAAGATATGAATTTGTGATATTTGCCATCTTGAGAAACCCTGTTTACCCTGGACAATATTTGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCCAAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGAATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGCGAGGATTCCTTGGTTCGACGCTTTTTTCAGTGGATTTCATACTCTTTGCATTCCACATGTTCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATTTCCTTTTTGATCCGACCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAGAGAATACTTGGAAATGTCCAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGGGGATATGGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACCCTGCAAGAATTTTATGCATGAATTTGGCAAATGGAATAGATTGTGCAGAATGGGACCAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14109#0 GCAGCAGACGCAGAGACCAGTAGCTTTCGCAGAGGCGGCAGCCACCACCGCCTCCTCCTC 60
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 CTCCTCCTCATCCGACGGTGTGCAACCAAGCGATGGAGTTCTCCGGCGGCGCGACCGTGT 120
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 CGGCGCCGTTCGGTTGCTGCCGTGCGGCGTGGGGCGCCGCGGCGGCGGGTGCGGGGGCGG 180
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 AGGGAAGGAGCAGGAGGGTTGTGCCGCGCGCGGTGGAGCCGCGGCGGCGCGGGCGGTGGA 240
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 TGGTGAGGTGCGTGGCGACGGAGAAGCACAAGGACGCGGCGGCGCGGCGCGGCGGCGTGG 300
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 AGGTGGAGTTCGCCGACGAGGAGGACTACGTCAAGGGCGGCGGCGGCGAGCTTCTCTACG 360
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 TGCAAATGCAGGCGTCCAAGTCCATGGACAGCCAGTCCAAGATCTCCTCCAAGCTGCTGC 420
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 CCATACCCGATGAAAATTCAGTTCTTGATTTGGTCATCATTGGCTGCGGTCCAGCTGGCT 480
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 TATCCCTAGCAGCAGAGTCAGCTAAGAAAGGGCTCAATGTTGGTCTCATTGGCCCTGATC 540
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 TTCCATTCACGAACAACTACGGTGTGTGGGAGGATGAATTCAAAGACCTGGGCCTGGAGA 600
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 GCTGCATTGAACATGTCTGGAAGGATACTATCGTGTACCTAGACGGTAACAAGCCAATAA 660
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 TGATTGGCCGTGCGTATGGCAGGGTTCACAGGGACTTGCTGCACGAGGAGTTGCTGAGAC 720
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 GATGCTATGACGCTGGCGTCACATACCTCAGCTCGAAGGTGGACAAGATCATGGAATCTC 780
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 CTGATGGACATCGGGTAGTCTGTTGTGAAGGGGATCGTGAGGTACTTTGCAGGCTTGCCA 840
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 TTGTTGCATCTGGGGCAGCATCTGGTAGGCTTCTAGAGTACGAGGTTGGTGGTCCGCGTG 900
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 TTTGTGTGCAGACTGCATATGGTGTCGAAGTCGAGGTGGAAAACAATCCATATGATCCCA 960
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 GCTTAATGGTTTTCATGGACTACAGAGATTGCTTCAAAGACAAATTCTCACATCCTGAGC 1020
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 AAGGAAATCCAACGTTCCTCTATGCCATGCCCATGTCATCCACACGAATTTTCTTTGAGG 1080
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 AAACATGCCTAGCTTCTAAAGAAGCAATGCCCTTTGACCTCCTTAAAAAGCGGTTGATGT 1140
consensus_14109#1 ------------------------------------------------------------
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 CTCGGTTGGATGCAATGGGAGTTCATATTCGAAAAGTATACGAGGAGGAATGGTCCTACA 1200
consensus_14109#1 ------------------------------------------------------CCTACA 6
consensus_14109#2 ------------------------------------------------------------
consensus_14109#0 TTCCTGTTGGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAG 1260
consensus_14109#1 TTCCTGTGNGAGGGTCCTTACCAAATACAGACCAGAAAAATCTCGCATTTGGTGCGGCAG 66
consensus_14109#2 ---------------------------------------------CATTTGGTCGGCCAC 15
******** * **
consensus_14109#0 CAAGTATGGTGCATCCTGCAACC-GGATACTCGGTGG-TTAGATCATTGTCTGAAGCTCC 1318
consensus_14109#1 CAAGTATGGTGCATCCTGCAACC-GGATACTCAGTGG-TTAGATCATTGTCTGAAGCTCC 124
consensus_14109#2 CAAGTTTGTTGCATCTCGCAACCCGGATACTCAGTGGGTTAGATCATTGTCTGAAGCTCC 75
***** ** ****** ****** ******** **** **********************
consensus_14109#0 -AAGATATGCATCTGTGATATCTGATATCTTGAGAAACCGTGTCTACCCTGGAGAATATT 1377
consensus_14109#1 -AAGATATGCATCTGTGATATCTGACATCTTGAGAAACCGTGTCTACCCTGGACAATATT 183
consensus_14109#2 CAAGATATGAATTTGTGATATTTGCCATCTTGAGAAACCCTGTTTACCCTGGACAATATT 135
******** ** ******** ** ************* *** ********* ******
consensus_14109#0 TGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCC 1437
consensus_14109#1 TGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCC 243
consensus_14109#2 TGCCTGGAACCTCTCAAAGTTCCAGTCCATCAATGCTTGCATGGAGAACATTATGGCCCC 195
************************************************************
consensus_14109#0 AAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGA 1497
consensus_14109#1 AAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGA 303
consensus_14109#2 AAGAACGGAAACGTCAACGATCATTCTTCCTTTTTGGGCTGGCTTTGATAATCCAACTGA 255
************************************************************
consensus_14109#0 ATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGC 1557
consensus_14109#1 ATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGC 363
consensus_14109#2 ATAACGAAGGCATTCAGACATTCTTTGAAACCTTTTTCCGGTTGCCCAAATGGATGTGGC 315
************************************************************
consensus_14109#0 GAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGT 1617
consensus_14109#1 GAGGATTCCTTGGTTCGACGCTTTCTTCAGTGGATCTCATACTCTTTGCATTCTACATGT 423
consensus_14109#2 GAGGATTCCTTGGTTCGACGCTTTTTTCAGTGGATTTCATACTCTTTGCATTCCACATGT 375
************************ ********** ***************** ******
consensus_14109#0 TCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTCTGATCCGA 1677
consensus_14109#1 TCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATCTCCTCTTTGATCCGA 483
consensus_14109#2 TCACAATTGCGCCGAACCAAATGCGAATGAACCTTGTCAGACATTTCCTTTTTGATCCGA 435
******************************************** **** * ********
consensus_14109#0 CCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTCTACAAG 1737
consensus_14109#1 CCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAAAG 543
consensus_14109#2 CCGGCTCAACGATGATCAAGACCTACCTGACCTTGTAAAACCATTTCAGCAGTTTGAGAG 495
***************************************************** * **
consensus_14109#0 AATATTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATAT 1797
consensus_14109#1 AATACTAGGAAATGTACAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGAGGATAT 603
consensus_14109#2 AATACTTGGAAATGTCCAGTTTTGTAGTTTGTACATAACATAGTGAGAGCCAGGGGATAT 555
**** * ******** ************************************* ******
consensus_14109#0 GGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCAT 1857
consensus_14109#1 GGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACACTGCAAGAATTTTATGCAT 663
consensus_14109#2 GGGGGTTGGGGGGTTACTTATCATGCTAGAACAACAAAACCCTGCAAGAATTTTATGCAT 615
**************************************** *******************
consensus_14109#0 GAATTTGGCAAATGGAATAGATTATGCAGAATGGGAACACGTGAATACGTGATGCGTGTG 1917
consensus_14109#1 GAATTTGGCAAAAAAAAAAAAA-------------------------------------- 685
consensus_14109#2 GAATTTGGCAAATGGAATAGATTGTGCAGAATGGGACCAAAAAAAAAAAAAAAAAAAAAA 675
************ ** * *
consensus_14109#0 CTGGAACAACAAGTAGGAGGAATAAAACCCATGGATTA 1955
consensus_14109#1 --------------------------------------
consensus_14109#2 AAAAA--------------------------------- 680
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||