cluster # 14168

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Oryza sativa
cluster # 14168 cluster # 14168 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14168#0 length = 652 sequences # 12
consensus_14168#1 length = 607 sequences # 1

consensus_14168#2 length = 464 sequences # 1
consensus_14168#3 length = 220 sequences # 1

consensusID : consensus_14168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 652
fasta sequence

                              [CTGCTCCTCAAACGAGACCAAGAAATCAATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCG-GCGGCGCTCGCCGTG-CTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGG-CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA-GGA-CGCTGACGGCG-CACACCGATTACATCTACA-CCCAGCAGCATCACAA-CTAATTAATCTTA-TCGATC-AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATT-AAAACT-GCAAAT-CCGTC-ATG-CATG-CATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCC-TGTTGATAAACAGTTCTTGATCGATGAGAGCTAGCTTTCGTTTTGTTTTGATTTGTTGGTTGGTTGGTTGATTTGAGAGTTGAGACAGATCGATCTCTGCTTGAATGGTACCTGTCCCAAAAA]

[+] EMBL AK063647             [CTGCTCCTCAAACGAGACCAAGAAATCAATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCG GCGGCGCTCGCCGTG CTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGAGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATT AAAACT GCAAAT CCGTC ATG CATG CATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCC TGTTGATAAACAGTTCTTGATCGATGAGAGCTAGCTTTCG                                                                                   ]
[+] EMBL OSA276693            [          AACGAGACCAAGAAATCAATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCG GCGGCGCTCGCCGTG CTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATT AAAACT GCAAAT CCGTC ATG CATG CATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCC TGTTGATAAACAGTTCTTGATCGATGAGAGCTAGCTTTCGTTTTGTTTTGATTTGTTGGTTGGTTGGTTGATTTGAGAGTTGAGACAGATCGATCTCTGCTTGAATGGTACCTGTCCCAAAAA]
[+] EMBL AU068854             [          AACGAGACCAAGAAATCAATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCG GCGGCGCTCGCCGTG CTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATT AAAA                                                                                                                                                                                                                                                           ]
[+] EMBL OSC879               [           ACGAGACCAAGAAATCAATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCG GCGGCGCTCGCCGTG CTGCTGATTTNNGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGG CAACGNCTACNACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGNTC AATCAATANTCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTTGTATATAATTAAAAACT GCAAATCCCGTCAATG CATG CATGGTATGCCCATCGATCCA                                                                                                                                                                                                             ]
[+] EMBL AU063107             [               GACCAAGAAATCAATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCG GCGGCGCTCG CGTGNCTGCTGATTTTCGCNGCCTCGTCGG GACCGTNGCCATGGCCGGCCGG CAACGCCTACGATGTCTCTCGACGAGGAAGCGG TTCAGGCGGCGGCGNAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTTCCTCGCGAGGAGGGACCGTTGACGGCG CACACCGATTACATCTACA CCCAGAAGCATCACAA CTAATTAATCTTATTCGATCAAATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATT GNATATAATT AAAATT GAAAAT C                                                                                                                                                                                                                                                ]
[+] EMBL BI799509             [                                  CCAACGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGT GCGGTGGCGCGCGGCGCTCCACGTG CTGCTGATTTTCCCCGCCTCGTCGGCGACCGTGCCCATGCCCGCCCGCCCAACGCCTACGACGTCTCTCGACGAGGAAGCGGCCTCAGGC GCGGCCCAGTCGGAGATC GCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTCCCTCGCGAGGA GGACCCCTGACGGCGCCACACCGATTACATCTACACCCCAGCAGCATCACAACCTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATT AAAACTCGCAAAT CCGTC ATGCCATGCCATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAAC AACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTGT GCCGCCCCCCTTGTTGATAAACAGTTCTTGATCGAaaaa                                                                                               ]
[+] EMBL BI799097             [                                     aCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGT GC GT GC  GCGGCGCTC CCGTG CTGCTGATTTTC CCGCCTCGTCGGCGACCGT GCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACC ATACTAGTATTGGTATATAATT AAAACT GCAAAT CCGTC ATG CATG CATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAAC AACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTGTGGCCGCCCCCCTTGTTGATAAACAGTTCTTGATCGAaaaa                                                                                               ]
[+] EMBL C27547               [                                              AAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCG GCGGCGCTCGCCGTG CTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGG CAACGCCTACNACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGNNGGTGCANGGAAGGGGAAGGGGAGGAGGANTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA NCCAG                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OS0743A              [                                                           AGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCG GCGGCGCTCG CGTG CTGCTGATTTTCGCCGCCTCGTCGG GACCGTGGCCATNGCCGGCCGG CAACGCCTACGACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATC                                                                                                                                                                                                                                                                                           ]
[+] EMBL C98125               [                                                             GAATCCATGGCGGCGAGGACGGTGGCGGTGGCG GCGGCGCTCGCCGTG CTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATT AAAACT GCAAAT CCGTC ATG CATG CATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCC TGTTGATAAACAGTTCTTGATCGATGAGAGCTAaanaaaa                                                                                   ]
[+] EMBL AU068855             [                                                                                                            TG CTGCTGATTTTCGCCGCNTCGTCGGNGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGG CTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACGGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATT AAAACT GCAAAT CCGTC ATG CATG CATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCC TGTTGATAAACAGTTCTTGATCGATGAGAGCTAGCTTTCGTTTTGTTTTGATTTGTTGGTTGGTTGGTTGATTTGAGAGTTGAGACAGATCGATCTCTGCTTGAATGGTACCTGTCCCAAAAA]
[+] EMBL CB664294             [                                                                                                                       TTTCTCCTCCTCATCTGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGATGTCTCTCTACGATGAATCGG CTCAGGCGGCGGCGCAGTCGGATATCAGCGGCGGGTGCAAGGAAGGGGAAGGGGAGGAGGAGTGCCTCGCGAGGA GGA CGCTGACTGCG CACACCGATTACATCTACA CCCAGCAGCATCACAA CTAATTAATCTTA TCGATC AATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATT AAAACT GCAAAT CCGTC ATG CATG CATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCC TGTTGATAAACAG                                                                                                              ]




>consensus_14168#0
CTGCTCCTCAAACGAGACCAAGAAATCAATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGA
GGAATCCATGGCGGCGAGGACGGTGGCGGTGGCGGCGGCGCTCGCCGTGCTGCTGATTTT
CGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGA
CGAGGAAGCGGCTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGA
AGGGGAGGAGGAGTGCCTCGCGAGGAGGACGCTGACGGCGCACACCGATTACATCTACAC
CCAGCAGCATCACAACTAATTAATCTTATCGATCAATCAATAATCAATCAATCAATCAGT
CGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATTAAAACTGCAAATCCGTC
ATGCATGCATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACA
AACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCCTGTTGATAAAC
AGTTCTTGATCGATGAGAGCTAGCTTTCGTTTTGTTTTGATTTGTTGGTTGGTTGGTTGA
TTTGAGAGTTGAGACAGATCGATCTCTGCTTGAATGGTACCTGTCCCAAAAA

consensusID : consensus_14168#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 607
fasta sequence

                              [ATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCGGCGGCGCTCGCCGTGCTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGGCTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGGAGGAGGAGTGCCTCGCGAGGAGGACGCTGACGGCGCACACCGATTACATCTACACCCAGCAGCATCACAACTAATTAATCTTATCGATCAATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATTAAAACTGCAAATCCGTCATGCATGCATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCCTGTTGATNAACAGTTCTTGATCGATGAGAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]

[+] EMBL CA754385             [ATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCGGTGGCGGCGGCGCTCGCCGTGCTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATGGCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGGCTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGGAGGAGGAGTGCCTCGCGAGGAGGACGCTGACGGCGCACACCGATTACATCTACACCCAGCAGCATCACAACTAATTAATCTTATCGATCAATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATTAAAACTGCAAATCCGTCATGCATGCATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCCTGTTGATNAACAGTTCTTGATCGATGAGAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN]




>consensus_14168#1
ATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGAGGAATCCATGGCGGCGAGGACGGTGGCG
GTGGCGGCGGCGCTCGCCGTGCTGCTGATTTTCGCCGCCTCGTCGGCGACCGTGGCCATG
GCCGGCCGGCCAACGCCTACGACGTCTCTCGACGAGGAAGCGGCTCAGGCGGCGGCGCAG
TCGGAGATCGGCGGCGGGTGCAAGGAAGGGGAAGGGGGAGGAGGAGTGCCTCGCGAGGAG
GACGCTGACGGCGCACACCGATTACATCTACACCCAGCAGCATCACAACTAATTAATCTT
ATCGATCAATCAATAATCAATCAATCAATCAGTCGCTTCCTCTTCGATCTACCAATACTA
GTATTGGTATATAATTAAAACTGCAAATCCGTCATGCATGCATGGTATGCCCATCGATCC
ATCCATGATTATCTCTAGTTAGATGTAGTAACAAACTGCATGCGCGTGTTGTGCTCATCA
GTGTTAATTTTGGCCGCCCCCCTGTTGATNAACAGTTCTTGATCGATGAGAGCTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNN

consensusID : consensus_14168#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 464
fasta sequence

                              [CCGGTTACAGTATTTCAAGATTTCCCGGAGTCNGTGNGACCGANGCCTCCCCGAGTGAGGAATTCGCTNCNTGTAGNGACGACGGANTGCCCGANTCNCNNAGCAAGAAACNTGTTTAGACGAGGTACCCTAGCGNCGTAGTNCCCGGGCGGNGNACACNTGATNACATGCACACCCAGCGGCATCATNCTGATTNGTCNGATGGATCAGTCAATAATCAATCAATCAATCAGTAGCTTNCTCTTCNATCACCCNANACTAGANATGGTATNTATNTNAATCNGNAAATCNGTCATGCATGATGGNATGCCCATCGATCAATCGATNNTTATNTGNNGTTNGATATANNAACANAGTGCATGANCGTGNTGTGNTCATNNGTGTTAATGGNGTCCGCCCCCCTTGTTGATAAACAGTTCTTGATCGATGAGAGCTAGCTTTCGNTTTGTTTAANAAAAAAAANA]

[-] EMBL AA752160             [CCGGTTACAGTATTTCAAGATTTCCCGGAGTCNGTGNGACCGANGCCTCCCCGAGTGAGGAATTCGCTNCNTGTAGNGACGACGGANTGCCCGANTCNCNNAGCAAGAAACNTGTTTAGACGAGGTACCCTAGCGNCGTAGTNCCCGGGCGGNGNACACNTGATNACATGCACACCCAGCGGCATCATNCTGATTNGTCNGATGGATCAGTCAATAATCAATCAATCAATCAGTAGCTTNCTCTTCNATCACCCNANACTAGANATGGTATNTATNTNAATCNGNAAATCNGTCATGCATGATGGNATGCCCATCGATCAATCGATNNTTATNTGNNGTTNGATATANNAACANAGTGCATGANCGTGNTGTGNTCATNNGTGTTAATGGNGTCCGCCCCCCTTGTTGATAAACAGTTCTTGATCGATGAGAGCTAGCTTTCGNTTTGTTTAANAAAAAAAANA]




>consensus_14168#2
CCGGTTACAGTATTTCAAGATTTCCCGGAGTCNGTGNGACCGANGCCTCCCCGAGTGAGG
AATTCGCTNCNTGTAGNGACGACGGANTGCCCGANTCNCNNAGCAAGAAACNTGTTTAGA
CGAGGTACCCTAGCGNCGTAGTNCCCGGGCGGNGNACACNTGATNACATGCACACCCAGC
GGCATCATNCTGATTNGTCNGATGGATCAGTCAATAATCAATCAATCAATCAGTAGCTTN
CTCTTCNATCACCCNANACTAGANATGGTATNTATNTNAATCNGNAAATCNGTCATGCAT
GATGGNATGCCCATCGATCAATCGATNNTTATNTGNNGTTNGATATANNAACANAGTGCA
TGANCGTGNTGTGNTCATNNGTGTTAATGGNGTCCGCCCCCCTTGTTGATAAACAGTTCT
TGATCGATGAGAGCTAGCTTTCGNTTTGTTTAANAAAAAAAANA

consensusID : consensus_14168#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 220
fasta sequence

                              [GGTANATAATTAAAACTGCAAATCCGTCATGCATGCATGGTATGCCCATCGATCCANCCATGATTATNTNTAGTTANATGTAGTAACAAACTGCATGGGNGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCCTGTTNATAAACAGTTTTTGATCGATGANAGCTAGCTTTNGTTTTNTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU181770             [GGTANATAATTAAAACTGCAAATCCGTCATGCATGCATGGTATGCCCATCGATCCANCCATGATTATNTNTAGTTANATGTAGTAACAAACTGCATGGGNGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCCTGTTNATAAACAGTTTTTGATCGATGANAGCTAGCTTTNGTTTTNTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14168#3
GGTANATAATTAAAACTGCAAATCCGTCATGCATGCATGGTATGCCCATCGATCCANCCA
TGATTATNTNTAGTTANATGTAGTAACAAACTGCATGGGNGTGTTGTGCTCATCAGTGTT
AATTTTGGCCGCCCCCCTGTTNATAAACAGTTTTTGATCGATGANAGCTAGCTTTNGTTT
TNTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14168#0      CTGCTCCTCAAACGAGACCAAGAAATCAATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGA 60
consensus_14168#1      ----------------------------ATCGTTCCAGCGAAGAAGAAGAAGAAGAAGGA 32
consensus_14168#3      ------------------------------------------------------------
consensus_14168#2      ------------------------------------------------------------
                                                                                   

consensus_14168#0      GGAATCCATGGCGGCGAGGACGGTGGCGGTGGCGGCGGCGCTCGCCGTGCTGCTGATTTT 120
consensus_14168#1      GGAATCCATGGCGGCGAGGACGGTGGCGGTGGCGGCGGCGCTCGCCGTGCTGCTGATTTT 92
consensus_14168#3      ------------------------------------------------------------
consensus_14168#2      ------------------------------------------------------------
                                                                                   

consensus_14168#0      CGCCGCCTCGTCGGCGACCGTGGC-CATGGCCGGCCGGCCAACGCCTACGACGTCTCTCG 179
consensus_14168#1      CGCCGCCTCGTCGGCGACCGTGGC-CATGGCCGGCCGGCCAACGCCTACGACGTCTCTCG 151
consensus_14168#3      ------------------------------------------------------------
consensus_14168#2      ----------CCGGTTACAGTATTTCAAGATTTCCCGGAGTCNGTGNGACCGANGCCTCC 50
                                                                                   

consensus_14168#0      ACGAGGAAGCGGCTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGG 239
consensus_14168#1      ACGAGGAAGCGGCTCAGGCGGCGGCGCAGTCGGAGATCGGCGGCGGGTGCAAGGAAGGGG 211
consensus_14168#3      ------------------------------------------------------------
consensus_14168#2      CCGAGTGAGGAATTCGCTNCNTGTAGNGACGACGGANTGCCCGANTCNCNNAGCAAGAAA 110
                                                                                   

consensus_14168#0      AAGGGG-AGGAGGAGTGCCTC-GCGAGG-AGGACGCTGACGGCGCACACC-GATTACATC 295
consensus_14168#1      AAGGGGGAGGAGGAGTGCCTC-GCGAGG-AGGACGCTGACGGCGCACACC-GATTACATC 268
consensus_14168#3      ------------------------------------------------------------
consensus_14168#2      CNTGTTTAGACGAGGTACCCTAGCGNCGTAGTNCCCGGGCGGNGNACACNTGATNACATG 170
                                                                                   

consensus_14168#0      TACACCCAGCAGCATCACAACTAATTAATCTTATCGATCAATCAATAATCAATCAATCAA 355
consensus_14168#1      TACACCCAGCAGCATCACAACTAATTAATCTTATCGATCAATCAATAATCAATCAATCAA 328
consensus_14168#3      ------------------------------------------------------------
consensus_14168#2      CACACCCAGCGGCATCATN-CTGATTNGTCNGATGGATCAGTCAATAATCAATCAATCAA 229
                                                                                   

consensus_14168#0      TCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATTAAAACTGCAAAT 415
consensus_14168#1      TCAGTCGCTTCCTCTTCGATCTACCAATACTAGTATTGGTATATAATTAAAACTGCAAAT 388
consensus_14168#3      -------------------------------------GGTANATAATTAAAACTGCAAAT 23
consensus_14168#2      TCAGTAGCTTNCTCTTCNATCACCCNANACTAGANATGGTATNTATNTNAATCNGNAAAT 289
                                                            ****  **  * ** * * ****

consensus_14168#0      CCGTCATGCATGCATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAG 475
consensus_14168#1      CCGTCATGCATGCATGGTATGCCCATCGATCCATCCATGATTATCTCTAGTTAGATGTAG 448
consensus_14168#3      CCGTCATGCATGCATGGTATGCCCATCGATCCANCCATGATTATNTNTAGTTANATGTAG 83
consensus_14168#2      CNGTCATGCATG-ATGGNATGCCCATCGATCAATCGATNNTTATNTGNNGTTNGATATAN 348
                       * ********** **** ************* * * **  **** *   ***  ** ** 

consensus_14168#0      TAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCCT-GTTG 534
consensus_14168#1      TAACAAACTGCATGCGCGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCCT-GTTG 507
consensus_14168#3      TAACAAACTGCATGGGNGTGTTGTGCTCATCAGTGTTAATTTTGGCCGCCCCCCT-GTTN 142
consensus_14168#2      NAACANAGTGCATGANCGTGNTGTGNTCATNNGTGTTAATGGNGTCCGCCCCCCTTGTTG 408
                        **** * ******   *** **** ****  ********   * ********** *** 

consensus_14168#0      ATAAACAGTTCTTGATCGATGAGAGCTAGCTTTCGTTTTGTTTTGATTTGTTGGTTGGTT 594
consensus_14168#1      ATNAACAGTTCTTGATCGATGAGAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 567
consensus_14168#3      ATAAACAGTTTTTGATCGATGANAGCTAGCTTTNGTTTTNTTTTTAAAAAAAAAAAAAAA 202
consensus_14168#2      ATAAACAGTTCTTGATCGATGAGAGCTAGCTTTCGNTTTGTTTAANAAAAAAAANA---- 464
                       ** ******* *********** ****                                 

consensus_14168#0      GGTTGATTTGAGAGTTGAGACAGATCGATCTCTGCTTGAATGGTACCTGTCCCAAAAA 652
consensus_14168#1      NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------------------ 607
consensus_14168#3      AAAAAAAAAAAAAAAAAA---------------------------------------- 220
consensus_14168#2      ----------------------------------------------------------