These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14205#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2285 fasta sequence [CACGCCCCACTCAGCTCAGCTGCATGCTGCTGAGTGGCTGGGTGGGGTAGTGAAAAAAATCATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCATCCATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGCCGGAGCCTCCTCTCG-TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCCTTAATTTGAGCTGATCAGGCGCTGTAATTATAACGGAACAGGTCCTGGATACATACTTGTAGCATTAATAAAA] [+] EMBL AK068874 [CACGCCCCACTCAGCTCAGCTGCATGCTGCTGAGTGGCTGGGTGGGGTAGTGAAAAAAATCATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCATCCATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGCCGGAGCCTCCTCTCGCTCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCCTTAATTTGAGCTGATCAGGCGCTGTA ] [+] EMBL CA754026 [ CTGCATGCTGCTGAGTGGCTGGGTGGGGTAGTGAAAAAAATCATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCATCCATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGCCGGAGCCTCCTCTCG TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCATGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCG ] [+] EMBL AK099922 [ TAGTGAAAAAAATCATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCATCCATTCAAGAACGTACGTAGGTGCGACGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGCCGGAGCCTCCTCTCG TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCCGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCCTTAATTTGAGCTGATCAGG ] [+] EMBL CB667192 [ AGCTCGCTTCATACATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGGCGGAGCCTCCTCTCG TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGACGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGGCGCTCCATGGACGACGACGACGACTCCGCCGTGTCGCTCATGGGCGAGAAGGACTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAATAAGCTAGCAGCTGAAGAGAGGGAACACAGTGAGTTCGACATCTATCTG ] [+] EMBL AB096012 [ GGCGGCCGGAGCCTCCTCTCG TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTG ] [+] EMBL CF196850 [ AGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCNNNNGNNNNGAGACANNNGNNCAGNNNNNTACAGATTCTTA ] [+] EMBL CB661071 [ ACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGG AACCCCGGTCGATGCAGGAT ] [+] EMBL CB662432 [ ACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGANAACCCGGAAACCCCGGTCGATGCAGGAT ] [+] EMBL BE229362 [ cgaGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAG TCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTTTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATKGCGAGCCGAAGACGSTACATRTCATCGGGGRCATGTTTGGGCTTTCCAAGGAGA GDTCAAGCAGCTGCAGAACCSGGCGCTGGAGAAGCTCAAGAGGAGTGCAT ] [-] EMBL CB623895 [ TTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAAT ] [-] EMBL CB661072 [ AAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAaaaaaaaga ] [-] EMBL CB680934 [ GGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCGTTAATTTGAGCTGATCAGGCGCTGTAATTAT ] [-] EMBL CB667193 [ CGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCCCCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCCCCGGTTCGGGATCCCCGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTTTACTTTGATTTGCTACCCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACCCCCTGTAGCTTTTTAGCCCTATTATACATATATACTACCCCCCCAGTGACACGTACTGTACAAGTATAGTGCTAGATTTGCAGAAAGAAATGTGGTACCCGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGGAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTTTGCAATGCAAAGCAACCCTCAAAG GATTAAGGA ] [+] EMBL CF335917 [ CTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCCTTAATTTGAGCTGATCAGGCGCTGTAATTATAACGGAACAGGTCCTGGATACATACTTGTAGCATTAATAAAA] consensusID : consensus_14205#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 826 fasta sequence [GCTCATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAACTCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATGTGATGATCCCATCAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGA] [+] EMBL CB623896 [GCTCATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAACTCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATGTGATGATCCCATCAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14205#0 CACGCCCCACTCAGCTCAGCTGCATGCTGCTGAGTGGCTGGGTGGGGTAGTGAAAAAAAT 60 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 CATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCAT 120 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 CCATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGG 180 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 CCGGAGCCTCCTCTCGTCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGC 240 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 CGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGT 300 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 GCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCC 360 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 GTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGA 420 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 CGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGC 480 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 TTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTT 540 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 CGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTAC 600 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 ATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGC 660 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 TTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAAC 720 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 CCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCA 780 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 GAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCG 840 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 TTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAA 900 consensus_14205#1 ----------------------GCTCATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAA 38 *** ********************************** consensus_14205#0 AGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCT 960 consensus_14205#1 AGAGAACTCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCT 98 ****** ***************************************************** consensus_14205#0 AAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAA 1020 consensus_14205#1 AAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAA 158 ************************************************************ consensus_14205#0 AATACAGAT------------------TCTTATGAAAATAGAGGAGGCTCACCGGAAACT 1062 consensus_14205#1 AATACAGATGTGATGATCCCATCAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACT 218 ********* ********************************* consensus_14205#0 AGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAG 1122 consensus_14205#1 AGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAG 278 ************************************************************ consensus_14205#0 CAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCG 1182 consensus_14205#1 CAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCG 338 ************************************************************ consensus_14205#0 ATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACAT 1242 consensus_14205#1 ATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACAT 398 ************************************************************ consensus_14205#0 CCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCC 1302 consensus_14205#1 CCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCC 458 ************************************************************ consensus_14205#0 CAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAA 1362 consensus_14205#1 CAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAA 518 ************************************************************ consensus_14205#0 GTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAG 1422 consensus_14205#1 GTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAG 578 ************************************************************ consensus_14205#0 AAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAA 1482 consensus_14205#1 AAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAA 638 ************************************************************ consensus_14205#0 CGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCG 1542 consensus_14205#1 CGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCG 698 ************************************************************ consensus_14205#0 GAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGAT 1602 consensus_14205#1 GAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGAT 758 ************************************************************ consensus_14205#0 CACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCA 1662 consensus_14205#1 CACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCA 818 ************************************************************ consensus_14205#0 GCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCG 1722 consensus_14205#1 GCAGGTGA---------------------------------------------------- 826 ******** consensus_14205#0 GTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCT 1782 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 GTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGC 1842 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 ATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCA 1902 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 GCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATA 1962 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 CACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTG 2022 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 TACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGAT 2082 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 GGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACT 2142 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 GATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACAT 2202 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 TTTTTTACCCTTAATTTGAGCTGATCAGGCGCTGTAATTATAACGGAACAGGTCCTGGAT 2262 consensus_14205#1 ------------------------------------------------------------ consensus_14205#0 ACATACTTGTAGCATTAATAAAA 2285 consensus_14205#1 ----------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||