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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14205#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2285 fasta sequence
[CACGCCCCACTCAGCTCAGCTGCATGCTGCTGAGTGGCTGGGTGGGGTAGTGAAAAAAATCATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCATCCATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGCCGGAGCCTCCTCTCG-TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCCTTAATTTGAGCTGATCAGGCGCTGTAATTATAACGGAACAGGTCCTGGATACATACTTGTAGCATTAATAAAA]
[+] EMBL AK068874 [CACGCCCCACTCAGCTCAGCTGCATGCTGCTGAGTGGCTGGGTGGGGTAGTGAAAAAAATCATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCATCCATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGCCGGAGCCTCCTCTCGCTCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCCTTAATTTGAGCTGATCAGGCGCTGTA ]
[+] EMBL CA754026 [ CTGCATGCTGCTGAGTGGCTGGGTGGGGTAGTGAAAAAAATCATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCATCCATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGCCGGAGCCTCCTCTCG TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCATGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCG ]
[+] EMBL AK099922 [ TAGTGAAAAAAATCATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCATCCATTCAAGAACGTACGTAGGTGCGACGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGCCGGAGCCTCCTCTCG TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCCGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCCTTAATTTGAGCTGATCAGG ]
[+] EMBL CB667192 [ AGCTCGCTTCATACATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGGGCGGAGCCTCCTCTCG TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGACGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGGCGCTCCATGGACGACGACGACGACTCCGCCGTGTCGCTCATGGGCGAGAAGGACTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAATAAGCTAGCAGCTGAAGAGAGGGAACACAGTGAGTTCGACATCTATCTG ]
[+] EMBL AB096012 [ GGCGGCCGGAGCCTCCTCTCG TCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGCCGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGTGCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCCGTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGACGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGCTTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTTCGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTG ]
[+] EMBL CF196850 [ AGCCATGTCCTTTACCATCCAGAATTCAGCTCTACATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGCTTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAACCCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCNNNNGNNNNGAGACANNNGNNCAGNNNNNTACAGATTCTTA ]
[+] EMBL CB661071 [ ACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGG AACCCCGGTCGATGCAGGAT ]
[+] EMBL CB662432 [ ACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCAGAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCGTTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGANAACCCGGAAACCCCGGTCGATGCAGGAT ]
[+] EMBL BE229362 [ cgaGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAG TCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTTTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATKGCGAGCCGAAGACGSTACATRTCATCGGGGRCATGTTTGGGCTTTCCAAGGAGA GDTCAAGCAGCTGCAGAACCSGGCGCTGGAGAAGCTCAAGAGGAGTGCAT ]
[-] EMBL CB623895 [ TTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAAT ]
[-] EMBL CB661072 [ AAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAaaaaaaaga ]
[-] EMBL CB680934 [ GGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTGTACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCGTTAATTTGAGCTGATCAGGCGCTGTAATTAT ]
[-] EMBL CB667193 [ CGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCCCCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCCCCGGTTCGGGATCCCCGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCTGTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGCATCCTTGCAGGGGTTTGATGTTTACTTTGATTTGCTACCCTGAAGAAGAAAGGCCAAGCAGCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATACCCCCTGTAGCTTTTTAGCCCTATTATACATATATACTACCCCCCCAGTGACACGTACTGTACAAGTATAGTGCTAGATTTGCAGAAAGAAATGTGGTACCCGGATTCAGAGTTTCAGATGGCATCCTTTTTTGCTTATGTAAGGAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTTTGCAATGCAAAGCAACCCTCAAAG GATTAAGGA ]
[+] EMBL CF335917 [ CTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACTGATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACATTTTTTTACCCTTAATTTGAGCTGATCAGGCGCTGTAATTATAACGGAACAGGTCCTGGATACATACTTGTAGCATTAATAAAA]
consensusID : consensus_14205#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 826 fasta sequence
[GCTCATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAACTCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATGTGATGATCCCATCAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGA]
[+] EMBL CB623896 [GCTCATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAAAGAGAACTCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCTAAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAAAATACAGATGTGATGATCCCATCAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACTAGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAGCAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCGATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACATCCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCCCAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAAGTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAGAAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAACGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCGGAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGATCACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCAGCAGGTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14205#0 CACGCCCCACTCAGCTCAGCTGCATGCTGCTGAGTGGCTGGGTGGGGTAGTGAAAAAAAT 60
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 CATCGCGCGCGCGACGAAGCAGCAGCGACGTCTCGGTGAGTGACGGTGAGCTCGATCCAT 120
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 CCATTCAAGAACGTACGTAGGTGCGGCGGCGGAGGCGGCGGAGCTGATGAATTCCGGCGG 180
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 CCGGAGCCTCCTCTCGTCCCCGCTCTTCGCCAGCTCTTCCCCGGCCTTCCGCGGCGGCGC 240
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 CGCCGCCGCCTCCTGCTCCTCGTCTTCCTCCCCGTCCTCCTCCTCCCGCGCCACTGTGGT 300
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 GCCCATGGTGCACGACACCGGCGGCGGGCGAGCGTCGTCGACGGCGTGCCACTACTCGCC 360
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 GTCGCTGGTGGCGGCGGAGCCGGAGGAGCACGTCCACGGCCGCTCCAAGGACGACGACGA 420
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 CGACGCCGCCGTGTCGCTCATGGGCGAGAAGGCCTTGCTGGAGCTGCTCCTCGACATGGC 480
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 TTTGGAACAACACGCACCAGGGAAGAAGCTACCAGCTGAAGAGAGGGAAGAGAGTGAGTT 540
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 CGACATCTATCTGAGAGATGATAAAAGCCATGTCCTTTACCATCCAGAATTCAGCTCTAC 600
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 ATCTGTGAGTTCTTCACCATTGTCCGTAAAATCTAGCGAAAGATCGGATCTTGGTACAGC 660
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 TTCAGCGGTTCTGACGAAGGACGTGGCATTATTAGCAGAAGAAACAGACATTTTAGCAAC 720
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 CCAACTGAAAGCATCGCAACTTTACAGTGTGGATTCGAGCAAGTCAAATGAAGAACTGCA 780
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 GAGCAAGGGTCAGGTGTTCGTTAGATCGACGAGGTTACTCGAGAGGAGATCCAAGCGGCG 840
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 TTATGCTCCTCGAGCATCGATCGCTGATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAA 900
consensus_14205#1 ----------------------GCTCATGTTTCCTGCAGCGCTGACAATTCGAAGAAGAA 38
*** **********************************
consensus_14205#0 AGAGAAATCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCT 960
consensus_14205#1 AGAGAACTCAAAGAAGTATGGCAGAGTTCTTGAACCAGATGAGCCTTTCAAGCTGTTCCT 98
****** *****************************************************
consensus_14205#0 AAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAA 1020
consensus_14205#1 AAGAGATCGGGAGACGACGGAATTCCTGACAGCAAAAGAGGAGAGACATTTGTTCAGTAA 158
************************************************************
consensus_14205#0 AATACAGAT------------------TCTTATGAAAATAGAGGAGGCTCACCGGAAACT 1062
consensus_14205#1 AATACAGATGTGATGATCCCATCAGATTCTTATGAAAATAGAGGAGGCTCACCGGAAACT 218
********* *********************************
consensus_14205#0 AGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAG 1122
consensus_14205#1 AGAAGTTCAATGCGGCCGTGAGCCGACATTGGCAGAGTGGGCTGAGGCTGTAGGGATGAG 278
************************************************************
consensus_14205#0 CAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCG 1182
consensus_14205#1 CAGCAAGGAGCTGCAGTCCTCTATTCGCACCGGAAGACGGTGCCGGGAGAAGATGGCTCG 338
************************************************************
consensus_14205#0 ATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACAT 1242
consensus_14205#1 ATCGAACTTCAGGCTTGTGATTCATGTAGCTAGGAAGTATGAAGGATATGGTCTTGACAT 398
************************************************************
consensus_14205#0 CCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCC 1302
consensus_14205#1 CCAGGACCTTGTTCAGGATGGATGCAGTGGGTTGATGAAGACCTTTGAGAAGTTCAATCC 458
************************************************************
consensus_14205#0 CAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAA 1362
consensus_14205#1 CAGCAAGGGGTGTCGATTCCCGACCTACGCATATTGGTGGATACGCCAATCAATTAAGAA 518
************************************************************
consensus_14205#0 GTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAG 1422
consensus_14205#1 GTCAATCTTCAAGAACTCAAGACTAATCCGGTTACCGGAGAGTGTGTATGCGCTTCTGAG 578
************************************************************
consensus_14205#0 AAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAA 1482
consensus_14205#1 AAAGGTGGGCAAGGCAAGGATGGAATGCATCATGGAAGGGGAGCAACCCACCAACGCGAA 638
************************************************************
consensus_14205#0 CGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCG 1542
consensus_14205#1 CGTAGCGAGGCGCGCCGGCATCACCATCGAGAAGCTTGCGAAGCTCCGAGCGAAAACCCG 698
************************************************************
consensus_14205#0 GAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGAT 1602
consensus_14205#1 GAAACCCCGGTCGATGCAGGATCATGTCTGGTCAGATGAGGGTGTCACCTTCCAGGAGAT 758
************************************************************
consensus_14205#0 CACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCA 1662
consensus_14205#1 CACAGAAGACCCAAATGTGGAGCCACCTGACCTGAGTGTGGACAGGATGATGATGAGGCA 818
************************************************************
consensus_14205#0 GCAGGTGAGGGACTTCCTGGGGATCCTGAGCCCCAGGGAGAAGGAGATCATCGAGCACCG 1722
consensus_14205#1 GCAGGTGA---------------------------------------------------- 826
********
consensus_14205#0 GTTCGGGATCCACGATGGCGAGCCGAAGACGCTACATGTCATCGGGGACATGTTTGGGCT 1782
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 GTCCAAGGAGAGGATCAGGCAGCTGCAGAACCGGGCGCTGGAGAAGCTCAAGAGGAGTGC 1842
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 ATCCTTGCAGGGGTTTGATGTCTACTTTGATTTGCTAACCTGAAGAAGAAAGGCCAAGCA 1902
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 GCTCATTTGGTTTCAGAAACTTTCAGTCAAGTTGTCCATACAAAACAGCAGAAACACATA 1962
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 CACACTGTAGCTTTCTAGACCTATTATACATATATACTACACACCCAGTGACACGTACTG 2022
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 TACAAGTATAGTGCTAGATCTGCAGAAAGAAATGTGGTACACGGATTCAGAGTTTCAGAT 2082
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 GGCATCCTTTTTTGCTTATGTAAGTAAATTTCCCAGCAAGCTGCTGTTGGTGCTTATACT 2142
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 GATACTGCAAGTCTGCAATGCAAAGCAACCCTCATTGTAATTAAGGATAATCATGTACAT 2202
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 TTTTTTACCCTTAATTTGAGCTGATCAGGCGCTGTAATTATAACGGAACAGGTCCTGGAT 2262
consensus_14205#1 ------------------------------------------------------------
consensus_14205#0 ACATACTTGTAGCATTAATAAAA 2285
consensus_14205#1 -----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||