These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14239#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 904 fasta sequence [AACTAGTTTCCAAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT-TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG-CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG-TTGGTGAAGAT-GAGACGGACCGGAAAGTGCCAAGCTTTGC-GGAGACGACAGAAAAGAA-TGAA-GAGGAGGAAACAG-TAACGAAACCA-TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGTTCGACGGCAACGGGGAGAAGAAGATCCGACCGTACGCTCGCAAGGACGACTTCCTCCTCCCGGGCGTCGTGGAGGTCATCATCAAGTCGGTCTCGTCGCCGGCCATCGCGCCGGCCTGCACGCGGACCCACAACGTCCCGGCGGTGGTCTTCTCCGTGGCCGGATACACCGACAACTTCTTCCACGACAACACGGACGTGAT] [+] EMBL CB637739 [AACTAGTTGCCAAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TATAACAAAAACTTGTATATGTTAGGTGCTAACTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAG ] [+] EMBL CB640769 [ AGTTTCCAAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGATGACGATAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGC ] [+] EMBL CB652835 [ GTTTCCAAGGAGCGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAACAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCANAGGAGAAAACCATGTTCTTCGTAAA ] [+] EMBL OSS12884A [ AAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGNTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGGCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGGACCAACTGCGTCGA TNAGCAGAACCCTGTTCTTGGTNAACAACAGAGC ] [+] EMBL OSS13104A [ AAGGAGAGCAATCATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGAAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCG TCTCCTNA CTACATCTCCTTTTCCCG CTTTTNG CATCTACTNG CGGTTTTCGAGAG ACG NCTTGGTGATGAAG ACG ACCA CTGGGTNGAtt ] [+] EMBL CB639988 [ ATCGCCTACATGTTACACTCGGCTCGTCATGTGCGGATTTAAGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCATGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTT ] [+] EMBL CB673173 [ TGCGGATCCTTGCCT TAGAACAAAAACTTGTATATGTTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTACTCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGGTCCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGT ] [+] EMBL CB627352 [ TAAGCCTCTATAACAAAAACTTGTATATGCTAGGTGCTAGCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCGCCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACTACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGCAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGTTCGACGGCAACGGGGAGAAGAAGATCCGACCGTACGCTCGCAAGGACGACTTCCTCCTCCCGGGCGTCGTGGAGGTCATCATCAAGTCGGTCTCGTCGCCGGCCATCGCGCCGGCCTGCACGCGGACCCACAACGTCCCGGCGGTGGTCTTCTCCGTGGCCGGATACACCGACA ] [+] EMBL CB627940 [ GTGCTCTCTGGTGATCGCAGCTGGTTGGTACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCGCCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACTACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGCAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGTTCGACGGCAACGGGGAGAAGAAGATCCGACCGTACGCTCGCAAGGACGACTTCCTCCTCCCGGGCGTCGTGGAGGTCATCATCAAGTCGGTCTCGTCGCCGGCCATCGCGCCGGCCTGCACGCGGACCCACAACGTCCCGGCGGTGGTCTTCTCCGTGGCCGGATACACCGACAACTTCTTCCACGACAACACGGACGTGAT] [+] EMBL CB674912 [ ACCTCTGGGCTAAGCTTCTCTCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGTCCAGCGCCGGCGCGTTCGACGGCAACGGGGAGAAGAAGATCCGACCGTACGCTCGCAAGGACGACTTCCTCCTCCCGGGCGTCGTGGAGGTCATCATCAAGTCGGTCTCGTCGCCGGCCATCGCGCCGGCCTGCACGCGGACCCACAACGTCCCGGCGGTGGTCTTCTCCGTGGCCGGATACACCGACAACTTCTTCCACGACAACACGGACGTGA ] [+] EMBL OSR27771A [ TCAGGAGTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGNCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGNAGGNTCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGNACCACCTGCGTCGACT ] [+] EMBL OSS4248A [ GTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTTC GGAGACGNCAGAAAAGAA TNAAGGAGGAGGNAACAG TAACGGAANCA TTCGGGGACGGAGCTNAAGCC ] [+] EMBL OSS3537A [ GTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCACCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGGCAGGATCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTTCGGGAGACGNCAGAAAAGAA TGAA GAGGNGGAAACAG TAACGGAACCA TTCGGGGACGAAGCTNAGGCCAC ATNTTCTGCGTTNAGAACGGCGTT ATNAGGGGTTTCCATATTCG ] [+] EMBL OSS4545A [ GTCCTTGCGTGATGTCGTCGACGGCGTACACGCGG CCGTCCAAGCCANCAGGGCCGGCCGGAGAGCGGAGGCCTCCGCGGCTAGCCAAGGAGCTTGNNAGGNTCGAGCCCAAGAAGCTCGGGATTGGGCTGGTCGCCGGCTGCTGCCTCGCTCTCCTCACCTACATCTCCTTTGCCCGCCTTTTCGCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGTTCAACAACAGAGCAAAGAAGAGGACGAGAAANATGTTTGGTGAAGATNAAGACGGACCGGAAAGTGCCAAGNTTTTC GGAGACGACAGAAAAGAATTNAG GAGGAGGAAACAGTTACCGAAACCATTCCGGGGACGAAGntt ] [+] EMBL CA753695 [ GCCATCTACTCGCCGGTCTTCGAGAGCACGTCCTTGGTGATGAAGAACGCACCACCTGCGTCGACTCAGCAGAACCCTGTGCTGGCTCAACAACAGAGCAAAGAAGAGGACGAGAAAGATG TTGGTGAAGAT GAGACGGACCGGAAAGTGCCAAGCTTTGC GGAGACGACAGAAAAGAA TGAA GAGGAGGAAACAG TAACGAAACCA TCCGGGGACGAAGCTGAGGCCACAATCTCCTGCGATGAGAACGGCGTTGATGAGGGCTTCCCATATGCGCGGCCACCGGTCTGCGAGCTCACCGGCGATATCCGGATCAGCCCAAAGGAGAAAACCATGTTCTTCGTAAATCCGT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||