These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14248#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 3091 fasta sequence [CCAAACCTCTCCTCCTCGTCGTGGACCTGCCGGTGGCGACGCCGACGAGCTCCCCTCCCCACCGCCGCCGATCCGAGAGCCTCCACGTCCCCCTTGCCGGCGCGGCTCGAGCCCGGGAGCGGAGGAGGGCAAGCGTCCCCGGCGGCGTCCTCTGGTATGGTGGCGTGGTGATCCGGCCGGAGGAGCCTGGATGAAGGAGAGGAACCCGGCGGTTGCATCCTCCGCGCTGGCCCGGATCCTCGCCGCCTGCGCGTCCCAGGCAAAAGATTATGGGAGGTGCATAGCAGAAAAGGTCCCTGAGATTGAACAAAATATGTGTGCTAAGGAGTTTCTAGCACTCAGATCATGCATGCAGACTGTGGTCAAGCGCAAGGCTTGAAGTTCTGGAGTTAAAGCTTTCGGAATTTGATATTTGTTGCTTTCAGTGTCTTCATTGCTGTTCTCAGGCAATCAGATGCAAGGAGGTTTGGGTAGCCCTGGTGCTCTGTCTCATGCTTATGTACAACATCCTCCTCTACGATGTGACA-TACCAGACATACGTGGGCTGTTTTATGATGATGCTAATAAGTTCCTTATCGCTCCAACTGCGGATGGGATATTATACTGGAAGAATAGTTCCATCTACTCCAGCTGGACCTCCGAACTCTGATCCTGTAAATGATGGACCTGTTTTATCAGTTCGATATTCCCTGGATCTGAAAGCCATAGGGATACAACGATCCAATCATGAGGTTGAATTTATAAATAGGGAAACAGGACAAACCTGTAATAAAAAGTGCAGAGCTGATTCTGAAACTATACTTGGCTTTTTTTGGACAGACTGCCCCACTTGTGATGTCATAATAATAAAAACAAGTGGCCTGGATCTGTTTGCTTATGAACCTCAATCAAATGCTCTTCACTTGGTAGACTCAAAGAAGATCAATGTGAGCTGGTATTTTTACACTCATGAAAGTAGGTTGATTCTTCTTGCTTCAGGAATGCAATGCACACTATTTACTGGATATCAGTTTTCTGCTGGTGGGATTGTCAAATTGCCTAAGTTTGAGATGACAATGACTAAAAGTGAAGCAAACAACAAACCTGTTCTAGCTGCTGATGATGTTCATACCGTAACAGTCTATGGTAGGATTTATTGCTTGCAGCTTGACAGAGTTAGTATGACATTGAACTTGTATCGTTTCTACCGTGATGCTGTTGTACAACAGGGTACTCTGCCAACTTATTCAAGTAGAATTGCAGTTAGTGCGGTTGACAACATAATCATGGTTCACCAAATAGATGCAAAGGTTGTCATACTATATGATGTTTTTATGGACTCTTATGCACCAATTTCTGCACCACTCCCGCTGCTTGTGAGGGGGCTGCCTAGCAATAATAAGCAATCAGCTCAACCTCCAGATAGCCAATCTAGTGCATATGGTGGGACTCTCTATGGAGAAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGTGATGTTGAGAACGGGCTCTTATGGAAACTTCATTTAGACCTAGAGGCTATTGCCGCTAGTACATCTGATGCTCCTTTGATTCTGGAATTCCTTCAGAGACGAAAGTCTGACCCTAGCATGGTTAAGACTCTAAGCCTTGCTATAGTCCGGACTATCATCCTGGAGAGGAGACCAATTACTATGGTTGCAAAGGCAATGGATGTTGTTCTTGATTCCTATTCTCGTCTGATGAAAATGGGAGGTGGTCTTCCTGCAGTTAGGAGAACATCTGAGCAAAACCAACAGCCCGGTGTTCAGCCCGGTGTGAACCCAGATTCAGCAAGTGGGGATGGAAATAGACCTGTGCAGTCAAATTCAGAAGTTGAGCATGGAATTGCTAACCTGGCAGAACATGTAGATAGGACACTGTTAAATACATCATCTGATTCTGATGATATTATCGATGCATCAGGAGCATCTGATGCTCCTGACAGAAAACCACAAGTTTTGGGGCAGGATAGCAGACCATTGGCTTCTGGTACATCAACGCAGCATGGATCACATGTTGCTAGTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCAACAACACTCTCCGACAAGGAAG-CTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAGACAGTGAGGATTGTGATGAACGAATTCGAGTTTCTGCGAGCCTTTCGACACTACGACCGAACAGAACTGCTGGGAAATCCATGACTTGCAATGTGGTGGGTCTTTTTTCTGAAAGCTTATCGTATTTATTGTGGAAATTCTGAAAACTCTTCATGTGAAATTCCTCACTTGGATGGGGTATGAGATCAAGTGTCCCTGGCATGTAGGTCCAAGCCAAGTATGCAGAAGAGGTCACTGTCGGATGGGGTGAGGAGTGGGGAATGTTTAATTTAGGTGTTTTTTTTCTTTTTTTGCAGGGTTTTTTTTCTTTTTATAAAGACTCTCATTTATTGCCTATATTTACTAATAAGATAAA] [+] EMBL AK072620 [CCAAACCTCTCCTCCTCGTCGTGGACCTGCCGGTGGCGACGCCGACGAGCTCCCCTCCCCACCGCCGCCGATCCGAGAGCCTCCACGTCCCCCTTGCCGGCGCGGCTCGAGCCCGGGAGCGGAGGAGGGCAAGCGTCCCCGGCGGCGTCCTCTGGTATGGTGGCGTGGTGATCCGGCCGGAGGAGCCTGGATGAAGGAGAGGAACCCGGCGGTTGCATCCTCCGCGCTGGCCCGGATCCTCGCCGCCTGCGCGTCCCAGGCAAAAGATTATGGGAGGTGCATAGCAGAAAAGGTCCCTGAGATTGAACAAAATATGTGTGCTAAGGAGTTTCTAGCACTCAGATCATGCATGCAGACTGTGGTCAAGCGCAAGGCTTGAAGTTCTGGAGTTAAAGCTTTCGGAATTTGATATTTGTTGCTTTCAGTGTCTTCATTGCTGTTCTCAGGCAATCAGATGCAAGGAGGTTTGGGTAGCCCTGGTGCTCTGTCTCATGCTTATGTACAACATCCTCCTCTACGATGTGACATTACCAGACATACGTGGGCTGTTTTATGATGATGCTAATAAGTTCCTTATCGCTCCAACTGCGGATGGGATATTATACTGGAAGAATAGTTCCATCTACTCCAGCTGGACCTCCGAACTCTGATCCTGTAAATGATGGACCTGTTTTATCAGTTCGATATTCCCTGGATCTGAAAGCCATAGGGATACAACGATCCAATCATGAGGTTGAATTTATAAATAGGGAAACAGGACAAACCTGTAATAAAAAGTGCAGAGCTGATTCTGAAACTATACTTGGCTTTTTTTGGACAGACTGCCCCACTTGTGATGTCATAATAATAAAAACAAGTGGCCTGGATCTGTTTGCTTATGAACCTCAATCAAATGCTCTTCACTTGGTAGACTCAAAGAAGATCAATGTGAGCTGGTATTTTTACACTCATGAAAGTAGGTTGATTCTTCTTGCTTCAGGAATGCAATGCACACTATTTACTGGATATCAGTTTTCTGCTGGTGGGATTGTCAAATTGCCTAAGTTTGAGATGACAATGACTAAAAGTGAAGCAAACAACAAACCTGTTCTAGCTGCTGATGATGTTCATACCGTAACAGTCTATGGTAGGATTTATTGCTTGCAGCTTGACAGAGTTAGTATGACATTGAACTTGTATCGTTTCTACCGTGATGCTGTTGTACAACAGGGTACTCTGCCAACTTATTCAAGTAGAATTGCAGTTAGTGCGGTTGACAACATAATCATGGTTCACCAAATAGATGCAAAGGTTGTCATACTATATGATGTTTTTATGGACTCTTATGCACCAATTTCTGCACCACTCCCGCTGCTTGTGAGGGGGCTGCCTAGCAATAATAAGCAATCAGCTCAACCTCCAGATAGCCAATCTAGTGCATATGGTGGGACTCTCTATGGAGAAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGTGATGTTGAGAACGGGCTCTTATGGAAACTTCATTTAGACCTAGAGGCTATTGCCGCTAGTACATCTGATGCTCCTTTGATTCTGGAATTCCTTCAGAGACGAAAGTCTGACCCTAGCATGGTTAAGACTCTAAGCCTTGCTATAGTCCGGACTATCATCCTGGAGAGGAGACCAATTACTATGGTTGCAAAGGCAATGGATGTTGTTCTTGATTCCTATTCTCGTCTGATGAAAATGGGAGGTGGTCTTCCTGCAGTTAGGAGAACATCTGAGCAAAACCAACAGCCCGGTGTTCAGCCCGGTGTGAACCCAGATTCAGCAAGTGGGGATGGAAATAGACCTGTGCAGTCAAATTCAGAAGTTGAGCATGGAATTGCTAACCTGGCAGAACATGTAGATAGGACACTGTTAAATACATCATCTGATTCTGATGATATTATCGATGCATCAGGAGCATCTGATGCTCCTGACAGAAAACCACAAGTTTTGGGGCAGGATAGCAGACCATTGGCTTCTGGTACATCAACGCAGCATGGATCACATGTTGCTAGTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCAACAACACTCTCCGACAAGGAAG CTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAGACAGTGAGGATTGTGATGAACGAATTCGAGTTTCTGCGAGCCTTTCGACACTACGACCGAACAGAACTGCTGGGAAATCCATGACTTGCAATGTGGTGGGTCTTTTTTCTGAAAGCTTATCGTATTTATTGTGGAAATTCTGAAAACTCTTCATGTGAAATTCCTCACTTGGATGGGGTATGAGATCAAGTGTCCCTGGCATGTAGGTCCAAGCCAAGTATGCAGAAGAGGTCACTGTCGGATGGGGTGAGGAGTGGGGAATGTTTAATTTAGGTGTTTTTTTTCTTTTTTTGCAGGGTTTTTTTTCTTTTTATAAAGACTCTCATTTATTGCCTATATTTACTAATAAGATAAA] [+] EMBL CB639125 [ gCCTCTCCTCCTCGTCGTGGACCTGCCGGTGGCGACGCCGACGAGCTCCCCTCCCCACCGCCGCCGATCCGAGAGCCTCCACGTCCCCCTTGCCGGCGCGGCTCGAGCCCGGGAGCGGAGGAGGGCAAGCGTCCCCGGCGGCGTCCTCTGGTATGGTGGCGTGGTGATCCGGCCGGAGGAGCCTGGATGAAGGAGAGGAACCCGGCGGTTGCATCCTCCGCGCTGGCCCGGATCCTCGCCGCCTGCGCGTCCCAGGCAAAAGATTATGGGAGGTGCATAGCAGAAAAGGTCCCTGAGATTGAACAAAATATGTGTGCTAAGGAGTTTCTAGCACTCAGATCATGCATGCAGACTGTGGTCAAGCGCAAGGCTTGAAGTTCTGGAGTTAAAGCTTTCGGAATTTGATATTTGTTGCTTTCAGTGTCTTCATTGCTGTTCTCAGGCAATCAGATGCAAGGAGGTTTGGGTAGCCCTGGTGCTCTGTCTCATGCTTATGTACAACATCCTCCTCTACGATGTGACA TACCAGACATACGTGGGCTGTTTTATGATGATGCTAATAAGTTCCTTATCGCTCC ] [+] EMBL CB635290 [ CTCCTCCTCGTCGTGGACCTGCCGGTGGCGACGCCGACGAGCTCCCCTCCCCACCGCCGCCGATCCGAGAGCCTCCACGTCCCCCTTGCCGGCGCGGCTCGAGCCCGGGAGCGGAGGAGGGCAAGCGTCCCCGGCGGCGTCCTCTGGTATGGTGGCGTGGTGATCCGGCCGGAGGAGCCTGGATGAAGGAGAGGAACCCGGCGGTTGCATCCTCCGCGCTGACCCGGATCCTCGCCGCCTGCGCGTCCCAGGCAAAAGATTATGGGAGGTGCATAGCAGAAAAGGTCCCTGAGATTGAACAAAATATGTGTGCTAAGGAGTTTCTAGCACTCAGATCATGCATGCAGACTGTGGTCAAGCGCAAGGCTTGAAGTTCTGGAGTTAAAGCTTTCGGAATTTGATATTTGTTGCTTTCAGTGTCTTCATTGCTGTTCTCAGGCAATCAGATGCAAGGAGGTTTGGGTAGCCCTGGTGCTCTGTCTCATGCTTATGTACAACATCCTCCTCTACGATGTGACA TACCAGACATACGTGGGCTGTTTTATGATGATGCTAATAAGTTCCTTATCGCTCCAACTGCTGATCGGATATTATACTGGAAG ATAGTTCCATCTACTCCAGCTGGACCTCCGAACTCTGATCCTGTAAATGATGGACCTGTTTTATCAGTTCGATATTCCCTGGATCTGAAAGCCATAGGGATACAACGATCCAATCATGAGGTTGAATTTATAAATAGGGAAACAGGACAAACCTGTAATAAAAAGTGCAGAGCTGATTCTGAAACTATACTTGGCNTTTTTT ] [+] EMBL CF304444 [ TTGACAGAGTTAGTATGACATTGAACTTGTATCGTTTCTACCGTGATGCTGTTGTACAACAGGGTACTCTGCCAACTTATTCAAGTAGAATTGCAGTTAGTGCGGTTGACAACATAATCATGGTTCACCAAATAGATGCAAAGGTTGTCATACTATATGATGTTTTTATGGACTCTTATGCACCAATTTCTGCACCACTCCCGCTGCTTGTGAGGGGGCTGCCTAGCAATAATAAGCAATCAGCTCAACCTCCAGATAGCCAATCTAGTGCATATGGTGGGACTCTCTATGGAGAAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGTGATGTTGAGAACGGGCTCTTATGGAAACTTCATTTAGACCTAGAGGCTATTGCCGCTAGTACATCTGATGCTCCTTTGATTCTGGAATTCCTTCAGAGACGAAAGTCTGACCCTAGCATGGTTAAGACTCTAAGCCTTGCTATAGTCCGGACTATCATCCTGGAGAGGAGACCAATTACTATGGTTGCAAAGGCAATGGATGTTGTTCTTGATTCCTATTCTCGT ] [+] EMBL CB665817 [ GTTTTTATGGACTCTTATGCACCAATTTCTGCACCACTCCCGCTGCTTGTGAGGGGGCTGCCTAGCAATAATAAGCAATCAGCTCAACCTCCAGATAGCCAATCTAGTGCATATGGTGGGACTCTCTATGGAGAAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGTGATGTTGAGAACGGGCTCTTATGGAAACTTCATTTAGACCTAGAGGCTATTGCCGCTAGTACATCTGATGCTCCTTTGATTCTGGAATTCCTTCAGAGACGAAAGTCTGACCCTAGCATGGTTAAGACTCTAAGCCTTGCTATAGTCCGGACTATCATCCTGGAGAGGAGACCAATTACTATGGTTGCAAAGGCAATGGATGTTGTTCTTGATTCCTATTCTCGTCTGATGAAAATGGGAGGTGGTCTTCCTGCAGTTAGGAGAACATCTGAGCAAAACCAACAGCCCGGTGTTCAGCCCGGTGTGAACCCAGATTCAGCAAGTGGGGATGGAAATAGACCTGTGCAGTCAAATTCAGAAGTTGAGCATGGAATTGCTAACCTGGCAGAACATGTAGATAGGACACTGTTAAATACATCATCTGATTCTGATGATATTATCGATGCATCAGGAGCATCTGATGCTCCTGACAGAAAACCACAAGTTTTGGGGCAGGATAGCAGACCATTGGCTTCTGGTACATCAACGCAGCATGGATCACATGTTGCTAGTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTT ] [+] EMBL AK062191 [ GCACCAATTTCTGCACCACTCCCGCTGCTTGTGAGGGGGCTGCCTAGCAATAATAAGCAATCAGCTCAACCTCCAGATAGCCAATCTAGTGCATATGGTGGGACTCTCTATGGAGAAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGTGATGTTGAGAACGGGCTCTTATGGAAACTTCATTTAGACCTAGAGGCTATTGCCGCTAGTACATCTGATGCTCCTTTGATTCTGGAATTCCTTCAGAGACGAAAGTCTGACCCTAGCATGGTTAAGACTCTAAGCCTTGCTATAGTCCGGACTATCATCCTGGAGAGGAGACCAATTACTATGGTTGCAAAGGCAATGGATGTTGTTCTTGATTCCTATTCTCGTCTGATGAAAATGGGAGGTGGTCTTCCTGCAGTTAGGAGAACATCTGAGCAAAACCAACAGCCCGGTGTTCAGCCCGGTGTGAACCCAGATTCAGCAAGTGGGGATGGAAATAGACCTGTGCAGTCAAATTCAGAAGTTGAGCATGGAATTGCTAACCTGGCAGAACATGTAGATAGGACACTGTTAAATACATCATCTGATTCTGATGATATTATCGATGCATCAGGAGCATCTGATGCTCCTGACAGAAAACCACAAGTTTTGGGGCAGGATAGCAGACCATTGGCTTCTGGTACATCAACGCAGCATGGGTCACATGTTGCTAGTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCAACAACACTCTCCGACAAGGAAG CTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAGACAGTGAGGATTGTGATGAACGAATTCGAGTTTCTGCGAGCCTTTCGACACTACGACCGAACAGAACTGCTGGGAAATCCATGACTTGCAATGTGGTGGGT ] [+] EMBL CB618826 [ GGGCTGCCTAGCAATAATAAGCAATCAGCTCAACCTCCAGATAGCCAATCTAGTGCATATGGTGGGACTCTCTATGGAGAAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGTGATGTTGAGAACGGGCTCTTATGGAAACTTCATTTAGACCTAGAGGCTATTGCCGCTAGTACATCTGATGCTCCTTCGATTCTGGAATTCCTTCAGAGACGAAAGTCTGACCCTAGCATGGTTAAGACTCTAAGCCTTGCTATAGTCCGGACTATCATCCTGGAGAGGAGACCAATTACTATGGTTGCAAAGGCAATGGATGTTGTTCTTGATTCCTATTCTCGTCTGATGAAAATGGGAGGTGGTCTTCCTGCAGTTAGGAGAACATCTGAGCAAAACCAACAGCCCGGTGTTCAGCCCGGTGTGAACCCAGATTCAGCAAGTGGGGATGGAAATAGACCTGTGCAGTCAAATTCAGAAGTTGAGCATGGAATTGCTAACCTGGCAGAACATGTAGATAGGACACTGTTAAATACATCATCTGATTCTGATGATATTATCGATGCATCAGGAGCATCTGATGCTCCTGACAGAAAACCACAAGTTTTGGGGCAGGATAGCAGACCATTGGCTTCTGGTACATCAACGCAGCATGGATCACATGTTGCTAGTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACCAAATGATGGCTGATCCTGCGT ] [-] EMBL CB626837 [ GCATCTGATGCTCCTGACAGAAAACCACAAGTTTTGGGGCAGGATAGCAGACCATTGGCTTCTGGTACATCAACGCAGCATGGATCACATGTTGCTAGTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCGACAACACTCTCCGACAAGGAAG CTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGAC GGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAGACAGTGAGGATTGT ] [-] EMBL CB665818 [ GCATGGATCACATGTTGGTAGTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCAACAACACTCTCCGACAAGGAAG CTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAGTTGAACAAATGGAACGAGGTTGCTCAGTGAGCCAaaaaaagga ] [+] EMBL OS0961A [ GTGTGGCAGTTTCACCAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCAACAACACTCTCCGACAAGGAAG CTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTNACTGCGTTACTTCAAGACGGATACCACCTGGAGGCTCTTNG TACGNTAGAAAATACAAGGTAATAA ] [-] EMBL CB635291 [ ATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCGACAACACTCTCCGACAAGGAAG CTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGAC GGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAGACAGTGAGGATTGTGATGAACGAATTGGAGTTTCTGCGAGCCTTTCGACACTACGACCGAACAGAACTGCTGGGAAATCCATGACTTGCAATGTGGTAAGTCTTTTTTCTGAAAGCTTA ] [-] EMBL CB639126 [ CCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCAACAACACTCTCCGACAAGGAAG CTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTATTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGT ] [+] EMBL BI812944 [ TGTATCC ACAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCGAC ACACTCTCCGACAAGGAAGTCTGGGCGTGGACATGCTGAGAGA CGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAAC AATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCACGTTTTATGC AATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGAC ATTTAAGTATAATTGAACCAATGGAACGAGGTTGCTCAGTGAGACcaaaaaa ] consensusID : consensus_14248#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 741 fasta sequence [GTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATTAAATTCAGCGTGGGCACCGGATTTCCGCTAACCTCGATTACTAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCGACAACACTCTCCGACAAGGAAGCTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGAC--GGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAAAAAAAAAGG] [-] EMBL CB618827 [GTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTGCGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGGCTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTGAAATAGCCTTGTTTGTATCCAACAAGATTAAATTCAGCGTGGGCACCGGATTTCCGCTAACCTCGATTACTAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAGGTCGACAACACTCTCCGACAAGGAAGCTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGCACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACGCTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGAC GGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAAAAAAAAAGG] [+] EMBL C98177 [ CTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCATAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCTTCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAAATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTACAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACAAATGGAACGAGGTTGCTCAGTGAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14248#0 CCAAACCTCTCCTCCTCGTCGTGGACCTGCCGGTGGCGACGCCGACGAGCTCCCCTCCCC 60 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 ACCGCCGCCGATCCGAGAGCCTCCACGTCCCCCTTGCCGGCGCGGCTCGAGCCCGGGAGC 120 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 GGAGGAGGGCAAGCGTCCCCGGCGGCGTCCTCTGGTATGGTGGCGTGGTGATCCGGCCGG 180 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 AGGAGCCTGGATGAAGGAGAGGAACCCGGCGGTTGCATCCTCCGCGCTGGCCCGGATCCT 240 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 CGCCGCCTGCGCGTCCCAGGCAAAAGATTATGGGAGGTGCATAGCAGAAAAGGTCCCTGA 300 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 GATTGAACAAAATATGTGTGCTAAGGAGTTTCTAGCACTCAGATCATGCATGCAGACTGT 360 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 GGTCAAGCGCAAGGCTTGAAGTTCTGGAGTTAAAGCTTTCGGAATTTGATATTTGTTGCT 420 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TTCAGTGTCTTCATTGCTGTTCTCAGGCAATCAGATGCAAGGAGGTTTGGGTAGCCCTGG 480 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TGCTCTGTCTCATGCTTATGTACAACATCCTCCTCTACGATGTGACATACCAGACATACG 540 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TGGGCTGTTTTATGATGATGCTAATAAGTTCCTTATCGCTCCAACTGCGGATGGGATATT 600 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 ATACTGGAAGAATAGTTCCATCTACTCCAGCTGGACCTCCGAACTCTGATCCTGTAAATG 660 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 ATGGACCTGTTTTATCAGTTCGATATTCCCTGGATCTGAAAGCCATAGGGATACAACGAT 720 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 CCAATCATGAGGTTGAATTTATAAATAGGGAAACAGGACAAACCTGTAATAAAAAGTGCA 780 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 GAGCTGATTCTGAAACTATACTTGGCTTTTTTTGGACAGACTGCCCCACTTGTGATGTCA 840 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TAATAATAAAAACAAGTGGCCTGGATCTGTTTGCTTATGAACCTCAATCAAATGCTCTTC 900 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 ACTTGGTAGACTCAAAGAAGATCAATGTGAGCTGGTATTTTTACACTCATGAAAGTAGGT 960 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TGATTCTTCTTGCTTCAGGAATGCAATGCACACTATTTACTGGATATCAGTTTTCTGCTG 1020 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 GTGGGATTGTCAAATTGCCTAAGTTTGAGATGACAATGACTAAAAGTGAAGCAAACAACA 1080 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 AACCTGTTCTAGCTGCTGATGATGTTCATACCGTAACAGTCTATGGTAGGATTTATTGCT 1140 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TGCAGCTTGACAGAGTTAGTATGACATTGAACTTGTATCGTTTCTACCGTGATGCTGTTG 1200 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TACAACAGGGTACTCTGCCAACTTATTCAAGTAGAATTGCAGTTAGTGCGGTTGACAACA 1260 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TAATCATGGTTCACCAAATAGATGCAAAGGTTGTCATACTATATGATGTTTTTATGGACT 1320 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 CTTATGCACCAATTTCTGCACCACTCCCGCTGCTTGTGAGGGGGCTGCCTAGCAATAATA 1380 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 AGCAATCAGCTCAACCTCCAGATAGCCAATCTAGTGCATATGGTGGGACTCTCTATGGAG 1440 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 AAGGTTGGAGCTTTCTCATTCCTGACCTCGTCTGTGATGTTGAGAACGGGCTCTTATGGA 1500 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 AACTTCATTTAGACCTAGAGGCTATTGCCGCTAGTACATCTGATGCTCCTTTGATTCTGG 1560 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 AATTCCTTCAGAGACGAAAGTCTGACCCTAGCATGGTTAAGACTCTAAGCCTTGCTATAG 1620 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TCCGGACTATCATCCTGGAGAGGAGACCAATTACTATGGTTGCAAAGGCAATGGATGTTG 1680 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TTCTTGATTCCTATTCTCGTCTGATGAAAATGGGAGGTGGTCTTCCTGCAGTTAGGAGAA 1740 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 CATCTGAGCAAAACCAACAGCCCGGTGTTCAGCCCGGTGTGAACCCAGATTCAGCAAGTG 1800 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 GGGATGGAAATAGACCTGTGCAGTCAAATTCAGAAGTTGAGCATGGAATTGCTAACCTGG 1860 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 CAGAACATGTAGATAGGACACTGTTAAATACATCATCTGATTCTGATGATATTATCGATG 1920 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 CATCAGGAGCATCTGATGCTCCTGACAGAAAACCACAAGTTTTGGGGCAGGATAGCAGAC 1980 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 CATTGGCTTCTGGTACATCAACGCAGCATGGATCACATGTTGCTAGTGTGGCAGTTTCAC 2040 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 CAAGTGAAATGTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTG 2100 consensus_14248#1 ----------GTTTGAGTCTGTGTTTGTACTTGTTGAAGACGAAATGATGGCTGATCCTG 50 ************************************************** consensus_14248#0 CGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGG 2160 consensus_14248#1 CGTATCTTATTTCTATCATCATGGAGTTTCTACGAAGTGTCTCAAGAGCTGGGTTGAAGG 110 ************************************************************ consensus_14248#0 CTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTG 2220 consensus_14248#1 CTCCTCCTAACCTTTTTGTGATGATGACAACACTGCTGGCCCGCAGCAACCGTTATCCTG 170 ************************************************************ consensus_14248#0 AAATAGCCTTGTTTGTATCCAACAAGAT-------------------------------- 2248 consensus_14248#1 AAATAGCCTTGTTTGTATCCAACAAGATTAAATTCAGCGTGGGCACCGGATTTCCGCTAA 230 **************************** consensus_14248#0 ----------------CCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAG 2292 consensus_14248#1 CCTCGATTACTAAGATCCTAGAACCCTCCAAGGAACTTGCGATGCAACTCATGGAATTAG 290 ******************************************** consensus_14248#0 GTCAACAACACTCTCCGACAAGGAAGCTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGC 2352 consensus_14248#1 GTCGACAACACTCTCCGACAAGGAAGCTGGGCGTGGACATGCTGAGAGAGCGGGGCTTGC 350 *** ******************************************************** consensus_14248#0 ACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACG 2412 consensus_14248#1 ACCATGACTACGTCACTGCGTTACTGCAAGACGGATACCACCTGGAGGCTCTTCGCTACG 410 ************************************************************ consensus_14248#0 CTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCA 2472 consensus_14248#1 CTAGAAAATACAAGGTAATAACTGTGCAGCCTGTCCTGTTCTTGGAGAAAGCTGTGGCCA 470 ************************************************************ consensus_14248#0 TAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCT 2532 consensus_14248#1 TAAACAGCGCGCAGAACCTCGCCGCCATGCTGAGCTTCTTCTCCGAGTTCACGCCGACCT 530 ************************************************************ consensus_14248#0 TCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAA 2592 consensus_14248#1 TCAAGACGACGTCGGACTACGGCAGATACCGGCATATCTTGTCTGAGATGATCTGAACAA 590 ************************************************************ consensus_14248#0 ATTTCAGTAGACAGGGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTA 2652 consensus_14248#1 ATTTCAGTAGAC--GGTGAACTGCCTGAAACGATTTGGCACGTTTTATGCAAATCCCGTA 648 ************ ********************************************** consensus_14248#0 CAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACA 2712 consensus_14248#1 CAGAAGAAACTTGATACGAGGAATGGTGTAAAGTTCAGACGATTTAAGTATAATTGAACA 708 ************************************************************ consensus_14248#0 AATGGAACGAGGTTGCTCAGTGAGACAGTGAGGATTGTGATGAACGAATTCGAGTTTCTG 2772 consensus_14248#1 AATGGAACGAGGTTGCTCAGTGAAAAAAAAAGG--------------------------- 741 *********************** * * *** consensus_14248#0 CGAGCCTTTCGACACTACGACCGAACAGAACTGCTGGGAAATCCATGACTTGCAATGTGG 2832 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TGGGTCTTTTTTCTGAAAGCTTATCGTATTTATTGTGGAAATTCTGAAAACTCTTCATGT 2892 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 GAAATTCCTCACTTGGATGGGGTATGAGATCAAGTGTCCCTGGCATGTAGGTCCAAGCCA 2952 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 AGTATGCAGAAGAGGTCACTGTCGGATGGGGTGAGGAGTGGGGAATGTTTAATTTAGGTG 3012 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TTTTTTTTCTTTTTTTGCAGGGTTTTTTTTCTTTTTATAAAGACTCTCATTTATTGCCTA 3072 consensus_14248#1 ------------------------------------------------------------ consensus_14248#0 TATTTACTAATAAGATAAA 3091 consensus_14248#1 ------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||