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Oryza sativa
cluster # 14255 cluster # 14255       Sequences # 15       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14255#0 length = 2120 sequences # 13  
 consensus_14255#1 length = 472 sequences # 1  
consensus_14255#2 length = 235 sequences # 1  
consensusID : consensus_14255#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 2120
fasta sequence 
                              [AAGTCCGATGCAAAGCGGCGGCACTTCGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGTCTCCGCCTCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGCTCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCAACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCGGCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCGAGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGCTTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTGAAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTCTGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAAACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAAGTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCATCGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTACCTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTGGAATTTTCAATGGCTTAAAAAGTGAGGTACATGTGTTTATTCGGCAGAAGAAAGTTTTAAGAGGGTTTGATGAAGAGGTCAGAGATTTCATCGCTGAACAGATGTCTCTAAGGGGCATCACATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCA-GGCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT-GGCATTCACCCAACATC-TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTAAAAATCAGCCTAATCTGAATTTTACATCATATCTGTGCTAGCATTTCCTAATATGTTGAAATTTTGCGGCAAAAGATGCATATTTCTTTTTGAGTAAAAAAAAAAAAAGA]

[+] EMBL CB635804             [AAGTCCGATGCAAAGCGGCGGCACTTCGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGTCTCCGCCTCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGCTCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCAACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCGGCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCGAGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGCTTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTGAAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTCTGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAAACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAAGTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCATCGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTACCTTCANAACCTGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB646067             [                                                              TTCTCCTGCCCCCCAACACTCCAAACCCTAACGCGCACCATCCCCCTCCGCGTCCGCCTCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGCTCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCAACGGCGCGCCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCGGCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCGAGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGCTTCGTGGGTGTGCTCCAAAGAAATCATTAGTGTATGGATCCAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK103418             [                                                                                                                                         CTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGCTCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCAACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCGGCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCGAGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGCTTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTGAAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTCTGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAAACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAAGTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCATCGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTACCTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTGGAATTTTCAATGGCTTAAAAAGTGAGGTACATGTGTTTATTCGGCAGAAGAAAGTTTTAAGAGGGTTTGATGAAGAGGTCAGAGATTTCATCGCTGAACAGATGTCTCTAAGGGGCATCACATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCA GGCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACCCAACATC TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAA TTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTACAACTCAGCCTAATCTGAATTTTACATCATATCTGTGC                                                                        ]
[-] EMBL CA305667             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTCTGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAAACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAAGTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCATCGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTACCTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTGGAATTTTCAATGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AA751995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    cacgAGAGA TTCATCGCTGAACAGATGTCTCTAAGGGGCATCACATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTANAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGANATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAANGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCANATTACAGANCTGTNCCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAAAACA NGCTATTGANGANTATGGANATGTTGATATCTATACANCAAACTTCANGCCACTTANGGCAACTCTCTCTGGATTACCTGATCGCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF308656             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCA GGCTATTGAGGAGTATGGATATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF308352             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTCTGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTAAACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAGCAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATGTTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAACAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCTCCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCA GGCTATTGAGGAGTATGGATATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB635805             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTCTTACTGAAGAGCA GGCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACCCAACATC TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAA TTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATATACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAGTATTATTTTGGTAGTACAACTCAGCCTAATCTGAATTTTACATCATATCTGTGCTAGCATTTCCTAATATGTTGAAATTTTGCGGCAAAAGATGCATATTTCTTTTTGAGTAAAAAAAAAAAAAGA]
[-] EMBL CB646068             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TACTGAAGAGCAGGGCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTGAGGGCAACTTTCTGTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACCCAACATC TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGGGGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTA                                                                                                                         ]
[+] EMBL OSC8601              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTATTGAGGAGTATGGAGATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTGATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTNNTGCCACTATTNGGCATTCACCCANCATCTTGCAGAGGAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CF308657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACATGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGCTGACAAAGCAAGATTTTGATGCCACTATT GGCATTCACCCAACATC TGCAGAGGAATTTGTCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTAAAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGCTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTAAAGACATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTAAAAAa                                                                                                         ]
[-] EMBL CF308353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCCAACATT TGCACAGGAATTTGTCACAATGAGCAATGCAACTAGCAAAGTTTGCAGAAGCACAACAGATGAGGTAGAATCTAAACATGAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCTACTTCCGAGCAGTTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATATATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTAAAAAa                                                                                                         ]
[+] EMBL AU091603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGACTGGCATTCTCTGATCCCCTTNTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTANGAAAAAAAAGAAATATTATTTTGGTAGTAAAAA                                                                                                          ]




>consensus_14255#0
AAGTCCGATGCAAAGCGGCGGCACTTCGCGAGAGAGGCATGGCGACGACCGCGACCCTCC
CCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGTCTCCGCC
TCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGC
TCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCA
ACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCG
GCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCG
AGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGC
TTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTG
AAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTC
TGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAA
ACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAA
GTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCAT
CGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTAC
CTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTG
GAATTTTCAATGGCTTAAAAAGTGAGGTACATGTGTTTATTCGGCAGAAGAAAGTTTTAA
GAGGGTTTGATGAAGAGGTCAGAGATTTCATCGCTGAACAGATGTCTCTAAGGGGCATCA
CATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTC
TGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTA
AACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAG
CAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATG
TTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAA
CAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCT
CCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCAGGCTATTGAGGAGTATGGAG
ATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTG
ATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACA
TGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGC
TGACAAAGCAAGATTTTGATGCCACTATTGGCATTCACCCAACATCTGCAGAGGAATTTG
TCACAATGAGAAATGCAACTAGAAAAGTTCGGAGAAGCACAACAGATGAGGTAGAATCTA
AAGATAAGGTTGTTACTCAGAACTAGTACAGATAGGAGGCATTCTCAGAGGGACTTCTCT
ACTTCCGAGCAGCTGATTTACACTGGGCGGACAATTTTTTTTTTGTAGCGGTATCCACGG
AAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCT
GATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTT
CCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTA
AGAAAAAAAAGAAATATTATTTTGGTAGTAAAAATCAGCCTAATCTGAATTTTACATCAT
ATCTGTGCTAGCATTTCCTAATATGTTGAAATTTTGCGGCAAAAGATGCATATTTCTTTT
TGAGTAAAAAAAAAAAAAGA

consensusID : consensus_14255#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 472
fasta sequence 
                              [GNCAGAGGAATTTGTCACAATGAGAAATGCAACTTGGCAAAGTTCNGGAGAAGCCACCAACCAGATGAGGTAGAATCTTAAAGGATTAAGGTTGTTACCTCCAGAACTTAGTTACCAGATTAGGAGGCCATTCCTCCAGGAGGGACTTCTCCTACCTCCGAAGCAAGCTTGATTTACCACTGGGCGGACCAATTTTTTTTTGTAGCCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTACAACTCAGCCTAATCTGAATTTTACATCAAAAAAAAAAAAAAAA]

[+] EMBL AU096824             [GNCAGAGGAATTTGTCACAATGAGAAATGCAACTTGGCAAAGTTCNGGAGAAGCCACCAACCAGATGAGGTAGAATCTTAAAGGATTAAGGTTGTTACCTCCAGAACTTAGTTACCAGATTAGGAGGCCATTCCTCCAGGAGGGACTTCTCCTACCTCCGAAGCAAGCTTGATTTACCACTGGGCGGACCAATTTTTTTTTGTAGCCGGTATCCACGGAAAGGAAACCCATGACAGGAAGCCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTACAACTCAGCCTAATCTGAATTTTACATCAAAAAAAAAAAAAAAA]




>consensus_14255#1
GNCAGAGGAATTTGTCACAATGAGAAATGCAACTTGGCAAAGTTCNGGAGAAGCCACCAA
CCAGATGAGGTAGAATCTTAAAGGATTAAGGTTGTTACCTCCAGAACTTAGTTACCAGAT
TAGGAGGCCATTCCTCCAGGAGGGACTTCTCCTACCTCCGAAGCAAGCTTGATTTACCAC
TGGGCGGACCAATTTTTTTTTGTAGCCGGTATCCACGGAAAGGAAACCCATGACAGGAAG
CCAGCAAACTTGTATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTG
TAGCTTGAACACGGTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGT
GCTGCACCATGTGAGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTT
TGGTAGTACAACTCAGCCTAATCTGAATTTTACATCAAAAAAAAAAAAAAAA

consensusID : consensus_14255#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 235
fasta sequence 
                              [CACATCATCGCCTTCGCTTCTCCTCTCTCCGCCCCACACTGTCGGAAGTCGGAAGCAAAGCGTCGGCACCGGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGNCTCCGCCTCCACCGNNGTCGCTTCCTCCACCACCTCCCCTNNCTCGCTGNCCTCCCGAGGCTCCCGNTCCCGCGACCT]

[+] EMBL C28420               [CACATCATCGCCTTCGCTTCTCCTCTCTCCGCCCCACACTGTCGGAAGTCGGAAGCAAAGCGTCGGCACCGGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGNCTCCGCCTCCACCGNNGTCGCTTCCTCCACCACCTCCCCTNNCTCGCTGNCCTCCCGAGGCTCCCGNTCCCGCGACCT]




>consensus_14255#2
CACATCATCGCCTTCGCTTCTCCTCTCTCCGCCCCACACTGTCGGAAGTCGGAAGCAAAG
CGTCGGCACCGGCGAGAGAGGCATGGCGACGACCGCGACCCTCCCCTTCTCCTGCTCCTC
CACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGNCTCCGCCTCCACCGNNGTCGCTT
CCTCCACCACCTCCCCTNNCTCGCTGNCCTCCCGAGGCTCCCGNTCCCGCGACCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14255#0      AAGTCCGATGCAAAGCGGCGGCACTTCGCGAGAGAGGCATGGCGACGACCGCGACCCTCC 60
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      CCTTCTCCTGCTCCTCCACCCTCCAAACCCTAACCCGCACCATCCCCCTCCGTCTCCGCC 120
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TCCACCGCCGCCGCTTCCTCCACCACCTCCCCTCCCTCGCTGCCCTCCCGAGGCTCCCGC 180
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TCCCGCGACCTCCCCTCCTCCCCCACGCGCGCCGCCACGTCTCGGCGTCCGCGGCGCCCA 240
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      ACGGCGCGTCCTCCGAGGGGGAGTACGACTACGACCTCTTCACCATCGGCGCCGGGAGCG 300
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      GCGGGGTCCGGGCCTCGCGCTTCGCCTCCACGCTCTACGGCGCCCGCGCCGCCGTCTGCG 360
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      AGATGCCCTTCGCCACCGTCGCCTCGGACGACCTCGGTGGAGTCGGCGGCACATGTGTGC 420
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TTCGTGGGTGTGTTCCAAAGAAATTATTAGTGTATGGATCCAAGTACTCTCATGAGTTTG 480
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      AAGAGTCTCATGGCTTTGGGTGGGTGTATGAAACTGATCCAAAGCATGACTGGAACACTC 540
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TGATTGCCAACAAAAATACAGAGCTGCAGCGCCTTGTTGGCATTTACAAGAATATTTTAA 600
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      ACAACTCAGGAGTTACTCTAATTGAAGGCCGTGGAAAGATAGTTGATCCACATACTGTAA 660
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      GTGTAGATGGAAAGCTCTACACTGCTAGGAACATACTTATAGCTGTTGGTGGGCGACCAT 720
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      CGATGCCAAATATCCCAGGAATAGAGCATGTTATAGATTCTGATGCTGCACTGGATCTAC 780
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      CTTCAAAACCTGAGAAAATTGCAATAGTGGGAGGTGGATATATTGCTCTGGAGTTTGCTG 840
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      GAATTTTCAATGGCTTAAAAAGTGAGGTACATGTGTTTATTCGGCAGAAGAAAGTTTTAA 900
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      GAGGGTTTGATGAAGAGGTCAGAGATTTCATCGCTGAACAGATGTCTCTAAGGGGCATCA 960
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      CATTTCATACTGAACAGAGTCCTCAAGCTATAACCAAATCAAATGATGGTTTGCTATCTC 1020
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TGAAGACAAACAAAGAAACTATTGGTGGGTTCTCACATGTTATGTTCGCAACAGGTCGTA 1080
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      AACCAAACACAAAGAACCTTGGACTAGAGGAGGTTGGGGTGAAATTGGACAAGAACGGAG 1140
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      CAATAATGGTTGATGAGTATTCTCGAACCTCAGTTGATTCAATTTGGGCAGTGGGAGATG 1200
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TTACTGATAGGGTCAACCTGACACCAGTTGCACTTATGGAAGGTGGTGCATTTGCAAAAA 1260
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      CAGTGTTTGGTGATGAACCTACCAAACCAGATTACAGAGCTGTACCATCTGCCGTTTTCT 1320
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      CCCAACCACCCATCGGACAAGTTGGTCTTACTGAAGAGCAGGCTATTGAGGAGTATGGAG 1380
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      ATGTTGATATCTATACAGCAAACTTCAGGCCACTTAGGGCAACTCTCTCTGGATTACCTG 1440
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      ATCGCATTTTCATGAAACTCATTGTGTGTGCTACAACAAACAAAGTTGTAGGAGTACACA 1500
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TGTGTGGTGAAGACGCACCTGAGATAATTCAGGGAGTTGCAATTGCTGTTAAAGCTGGGC 1560
consensus_14255#1      ------------------------------------------------------------
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TGACAAAGCAAGATTTTGATGCCACTATTGGCATTCACCCAACATCTGCAGAGGAATTTG 1620
consensus_14255#1      ----------------------------------------------GNCAGAGGAATTTG 14
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      TCACAATGAGAAATGCAACTAG--AAAAGTTCGGAGAAGC-ACAA--CAGATGAGGTAGA 1675
consensus_14255#1      TCACAATGAGAAATGCAACTTGGCAAAGTTCNGGAGAAGCCACCAACCAGATGAGGTAGA 74
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      ATCTAAAGA---TAAGGTTGTTACT--CAGAACT-AGTA--CAGAT-AGGAGGC-ATTCT 1725
consensus_14255#1      ATCTTAAAGGATTAAGGTTGTTACCTCCAGAACTTAGTTACCAGATTAGGAGGCCATTCC 134
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      C---AGAGGGACTTCTC-TACTTCCGA-GCAG--CTGATTTAC-ACTGGGCGGACAATTT 1777
consensus_14255#1      TCCAGGAGGGACTTCTCCTACCTCCGAAGCAAGCTTGATTTACCACTGGGCGGACCAATT 194
consensus_14255#2      --------------------------------------CACATCATCGCCTTCGCT-TCT 21
                                                                *  *  *      *    *

consensus_14255#0      TTTTTTTGTAGC-GGTATCCACGGAAAGGAAACCCATGACAG-GAAGCCAGCAAACTTGT 1835
consensus_14255#1      TTTTTTTGTAGCCGGTATCCACGGAAAGGAAACCCATGACAG-GAAGCCAGCAAACTTGT 253
consensus_14255#2      CCTCTCTCCGCCCCACACTGTCGGAAGTCGGAAGCAAAGCGTCGGCACCGGCGAG--AGA 79
                         * * *    *    *    *****     *  **   *   *   ** ** *    * 

consensus_14255#0      ATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACG 1895
consensus_14255#1      ATCATAGCGCTGACTGGCATTCTCTGATCCCCTTTTTGCATCTATTGTAGCTTGAACACG 313
consensus_14255#2      GGCATGGCGACGACCGCGACCCTCC---CCTTCTCCTGC-TCCTCCACCCTCCAAACCCT 135
                         *** ***  *** *  *  ***    **   *  *** **            *** * 

consensus_14255#0      GTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTG 1955
consensus_14255#1      GTGATACACTATTAGCTGCTGTTTTCCTTCTCTTGGTTGAAATAAGTGCTGCACCATGTG 373
consensus_14255#2      AACCCGCACCATCCCCCTCCGNCTCCGCCTCCACCGNNGTCGCT--TCCTCCACCACCT- 192
                             *** **   *  * *  * *     *   *  *       * ** *****  * 

consensus_14255#0      AGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTAAAAAT 2015
consensus_14255#1      AGTACCACAGCCTGGAAATTTTGTAAGAAAAAAAAGAAATATTATTTTGGTAGTACAACT 433
consensus_14255#2      ----CCCCTNNCTCGCTGNCCTCCCGAGGCTCCCGNTCCCGCGACCT------------- 235
                           ** *   ** *      *                     *  *             

consensus_14255#0      CAGCCTAATCTGAATTTTACATCATATCTGTGCTAGCATTTCCTAATATGTTGAAATTTT 2075
consensus_14255#1      CAGCCTAATCTGAATTTTACATCAAAAAAAAAAAAAAAA--------------------- 472
consensus_14255#2      ------------------------------------------------------------
                                                                                   

consensus_14255#0      GCGGCAAAAGATGCATATTTCTTTTTGAGTAAAAAAAAAAAAAGA 2120
consensus_14255#1      ---------------------------------------------
consensus_14255#2      ---------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)