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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14267#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1690 fasta sequence
[ACCACAACACCGTCGACTCGAGGCGCACGCAAACGCCGGTAGCGAGGAGAAGGATTGCTTCTTCTTTTTTTTTT-TGTGTGTGTGCTGTGTTCTTGGGTTTCTTGGCAATGGTGATTGGGGCCGAGATCAAGGACGAGATGGAGGAGGCGCCGCCGCTGCTGCTCGACGAGGCCGCGCGCCCTCGCCGCGTCGCGCTCTTCGTCGAGCCGTCTCCGTTCGCTTACATCTCTGGGTACAAGAACCGGTTTCAGAACTTCATCAAGCACTTGCGCGAAATGGGGGATGAGGTGATTGTTGTGACCAACCATGAGGGGGTTCCCCAAGAATTCCATGGTGCCAAGGTTATTGGTTCATGGAGCTTTCCCTGTCCAATGTATGGAAAAGTTCCTCTCTCGCTGGCACTCAGTCCTAGGATTATTTCGGAGGTTGCAAAGTTCAAGCCTGACATCATTCATGCATCCTCACCTGGAATTATGGTTTTTGGGGCACTTGCTATTGCTAAACTGCTCGGTGTCCCTCTAGTGATGTCCTATCACACCCATGTCCCAGTATACATTCCAAGATATACATTTAGCTGGCTTGTAGAGCCAATGTGGCAAGTCATAAGGTTCCTTCATAGAGCTGCTGATCTAACATTAGTGCCATCTGTTGCTATCAGCAAAGATTTTGAAACTGCCC-ATGTTATATCAGCTAATAGAATACGCCTTTGGAACAAAGGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACGGTGAGCCTGAAAAACCATTGATAAT-CCATGTAGGACGCTTTGGGCGTGAAAAGAACTTGGATTTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGAG-AAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTATCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGAT-CAGGAAGGGAAGACCAGCTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGATCTGGTACTGGAGG-AAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTTCCTACCAGCACCTGAGGTCAACAGAATCACACAACAC-TGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGACAATGTGTTGCCTTGTTGGGACATGATGTGATGAACTGTATTTGATTATAATCCACGGCATCAACACATCAAGATGCTATTGTGCACGCAATGAAAAGTTTGGTATCAACTCT]
[+] EMBL AK072289 [ACCACAACACCGTCGACTCGAGGCGCACGCAAACGCCGGTAGCGAGGAGAAGGATTGCTTCTTCTTTTTTTTTT TGTGTGTGTGCTGTGTTCTTGGGTTTCTTGGCAATGGTGATTGGGGCCGAGATCAAGGACGAGATGGAGGAGGCGCCGCCGCTGCTGCTCGACGAGGCCGCGCGCCCTCGCCGCGTCGCGCTCTTCGTCGAGCCGTCTCCGTTCGCTTACATCTCTGGGTACAAGAACCGGTTTCAGAACTTCATCAAGCACTTGCGCGAAATGGGGGATGAGGTGATTGTTGTGACCAACCATGAGGGGGTTCCCCAAGAATTCCATGGTGCCAAGGTTATTGGTTCATGGAGCTTTCCCTGTCCAATGTATGGAAAAGTTCCTCTCTCGCTGGCACTCAGTCCTAGGATTATTTCGGAGGTTGCAAAGTTCAAGCCTGACATCATTCATGCATCCTCACCTGGAATTATGGTTTTTGGGGCACTTGCTATTGCTAAACTGCTCGGTGTCCCTCTAGTGATGTCCTATCACACCCATGTCCCAGTATACATTCCAAGATATACATTTAGCTGGCTTGTAGAGCCAATGTGGCAAGTCATAAGGTTCCTTCATAGAGCTGCTGATCTAACATTAGTGCCATCTGTTGCTATCAGCAAAGATTTTGAAACTGCCC ATGTTATATCAGCTAATAGAATACGCCTTTGGAACAAAGGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACGGTGAGCCTGAAAAACCATTGATAAT CCATGTAGGACGCTTTGGGCGTGAAAAGAACTTGGATTTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGAG AAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTATCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGAT CAGGAAGGGAAGACCAGCTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGATCTGGTACTGGAGG AAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTTCCTACCAGCACCTGAGGTCAACAGAATCACACAACAC TGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGACAATGTGTTG ]
[+] EMBL CB622917 [ AACACCGTCGACTCGAGGCGCACGCAAACGCCGGTAGCGAGGAGAAGGATTGCTTCTTCTTTTTTTTTTGTGTGTGTGTGCTGTGTTCTTGGGTTTCTTGGCAATGGTGATTGGGGCCGAGATCAAGGACGAGATGGAGGAGGCGCCGCCGCTGCTGCTCGACGAGGCCGCGCGCCCTCGCCGCGTCGCGCTCTTCGTCGAGCCGTCTCCGTTCGCTTACATCTCTGGGTACAAGAACCGGTTTCAGAACTTCATCAAGCACTTGCGCGAAATGGGGGATGAGGTGATTGTTGTGACCAACCATGAGGGGGTTCCCCAAGAATTCCATGGTGCCAAGGTTATTGGTTCATGGAGCTTTCCCTGTCCAATGTATGGAAAAGTTCCTCTCTCGCTGGCACTCAGTCCTAGGATTATTTCGGAGGTTGCAAAGTTCAAGCCTGACATCATTCATGCATCCTCACCTGGAATTATGGTTTTTGGGGCACTTGCTATTGCTAAACTGCTCGGTGTCCCTCTAGTGATGTCCTATCACACCCATGTCCCAGTATACATTCCAAGATATACATTTAGCTGGCTTGTAGAGCCAATGTGGCAAGTCATAAGGTTCCTTCATAGAGCTGCTGATCTAACATTAGTGCCATCTGTTGCTATCAGCAAAGATTTTGAAACTGCCC ATGTTATATCAGCTAATAGAATACGCCTTTGGAACAAAGGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACGGTGAGCCTGGAAAACCATTGATAATCCCATGTA GACGCTTTGGGCGTGAAAAGA ]
[+] EMBL CB622881 [ AACACCGTCGACTCGAGGCGCACGCAAACGCCGGTAGCGAGGAGAAGGATTGCTTCTTCTTTTTTTTTTGTGTGTGTGTGCTGTGTTCTTGGGTTTCTTGGCAATGGTGATTGGGGCCGAGATCAAGGACGAGATGGAGGAGGCGCCGCCGCTGCTGCTCGACGAGGCCGCGCGCCCTCGCCGCGTCGCGCTCTTCGTCGAGCCGTCTCCGTTCGCTTACATCTCTGGGTACAAGAACCGGTTTCAGAACTTCATCAAGCACTTGCGCGAAATGGGGGATGAGGTGATTGTTGTGACCAACCATGAGGGGGTTCCCCAAGAATTCCATGGTGCCAAGGTTATTGGTTCATGGAGCTTTCCCTGTCCAATGTATGGAAAAGTTCCTCTCTCGCTGGCACTCAGTCCTAGGATTATTTCGGAGGTTGCAAAGTTCAAGCCTGACATCATTCATGCATCCTCACCTGGAATTATGGTTTTTGGGGCACTTGCTATTGCTAAACTGCTCGGTGTCCCTCTAGTGATGTCCTATCACACCCATGTCCCAGTATACATTCCAAGATATACATTTAGCTGGCTTGTAGAGCCAATGTGGCAAGTCATAAGGTTCCTTCATAGAGCTGCTGATCTAACATTAGTGCCATCTGTTGCTATCAGCAAAGATTTTGAAACTGCCC ATGTTATATCAGCTAATAGAATACGCCTTTGGAACAAAGGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACGGTGAGCCTG AAAACCATTGAT AT CCATGTANGACG ]
[+] EMBL AK060202 [ TGTGTGTGCTGTGTTCTTGGGTTTCTTGGCAATGGTGATTGGGGCCGAGATCAAGGACGAGATGGAGGAGGCGCCGCCGCTGCTGCTCGACGAGGCCGCGCGCCCTCGCCGCGTCGCGCTCTTCGTCGAGCCGTCTCCGTTCGCTTACATCTCTGGGTACAAGAACCGGTTTCAGAACTTCATCAAGCACTTGCGCGAAATGGGGGATGAGGTGATTGTTGTGACCAACCATGAGGGGGTTCCCCAAGAATTCCATGGTGCCAAGGTTATTGGTTCATGGAGCTTTCCCTGTCCAATGTATGGAAAAGTTCCTCTCTCGCTGGCACTCAGTCCTAGGATTATTTCGGAGGTTGCAAAGTTCAAGCCTGACATCATTCATGCATCCTCACCTGGAATTATGGTTTTTGGGGCACTTGCTATTGCTAAACTGCTCGGTGTCCCTCTAGTGATGTCCTATCACACCCATGTCCCAGTATACATTCCAAGATATACATTTAGCTGGCTTGTAGAGCCAATGTGGCAAGTCATAAGGTTCCTTCATAGAGCTGCTGATCTAACATTAGTGCCATCTGTTGCTATCAGCAAAGATTTTGAAACTGCCC ATGTTATATCAGCTAATAGAATACGCCTTTGGAACAAAGGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACGGTGAGCCTGAAAAACCATTGATAAT CCATGTAGGACGCTTTGGGCGTGAAAAGAACTTGGATTTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGAG AAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTATCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGAT CAGGAAGGGAAGACCAGCTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGATCTGGTACTGGAGG AAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTTCCTACCAGCACCTGAGGTCAACAGAATCACACAACAC TGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGACAATGTGTTGCCTTGTTGGGACATGATGTGATGAACTGTATTTGATTATAATCCACGGCATCAACACATCAAGATGCTATTGTGCACGCAATGAAAAGTTTGGTATCAACTCT]
[+] EMBL AU056833 [ GGTTTCTTGGCAATGGTGATTGGGGCCGAGATCAAGGACGAGATGGAGGAGGCGCCGCCGCTGCTGCTCGACGAGGCCGCGCGCCCTCGCCGCGTCGCGCTCTTCGTCGAGCCGTCTCCGTTCGCTTACATCTCTGGGTACAAGAACCGGTTTCAGAACTTCATCAAGCACTTGCGCGAAATGGGGGATGAGGTGATTGTTGTGACCAACCATGAGGGGGTTCCCCAAGAATTCCATGGTGCCAAGGTTATTGGTTCATGGAGCTTTCCCTGTCCAATGTATGGAAAAGTTCCTCTCTCGCTGGCACTCAGTCCTAGGATTATTTCGGAGGTTGCAAAGTTCAAGCCTGACATCATTCATGCATCCTCACCTGGAATTATGGTTTTTGGGGCACTTGCTATTGCTAAACTGCTCGGTGTCCCTCTAGTGATGTCCTATCACACCCATGTCCCAGTATACATTCCAAGATATACATTTAGCTGGCTTGTAGAGCCAATGTGGCAAGTCATAAGGTTCCTTCATAGAGCTGCTGATCTAACATTAGTGCCATCTGTTGCTATCAGCAAAGATTTTGAAACTGCCCAATGTTATATCAGCTAATAGAATACGCCTTTGGAACAAAGGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAG GACGctttgg ]
[-] EMBL CB622918 [ GATAAT CCATGTAGGACGCTTTGGGCG GAAAAGAACTTGGA TTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGAG AAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTCTCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGAT CAGGAAGGGAAGACCAGCTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCCATCTGGTACTGGAGG AAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTTCCTACCAGCACCTGAGGCCAACAGAATCACACAACAC TGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGACAATGTGTTGCCTTGTTGGGACATGATGTGATGAACTGTA ]
[-] EMBL CB622882 [ ATGTAGGACGCTTTGGGCGTGAAAAGAACTTGGATTTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGAG AAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTCTCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGAT CAGGAAGGGAAGACCAGCTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCCATCTGGTACTGGAGG AAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTTCCTACCAGCACCTGAGGCCAACAGAATCACACAACAC TGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGACAATGTGTTGCAAGGTTGGGACATGATGTGATGAACTGTATTTGATTA ]
[-] EMBL CB623290 [ GGATAGGTTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGTTGGAG AAGATATTTGAGGGGATGCCTGCCGTGTTCTCTGGAATGATGCAAGGTGAAGAGCTCTCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCGGAAACATTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGTTGGTGGTGTTCTTGATATAATTCCAGAAGAT CAGGAAGGGAAGACCAGCTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTTTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGCCGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCTGCAAAGAGTTCTACAATGCTGCCATCTGGTAATGGAGG AAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGTTGGCGCAGATGTTCCTACCAGCACCTGAGGCCAACAGAATCACACAACAC TGAAGCTTCATGGGGATGCTTTTGCAGCCATGATCCGGTCCTTGTAAATTTGTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTGGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGACAATGTGTTGCCTTGTTGGGACATGATGTGATGAACTGTATT ]
[+] EMBL AU056834 [ TGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGNGAAAGATGTTTGAGGGGATCCCTGCCGTGTTCACTGGAATGATGCAAGCCGAAGAGCTATCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGATCCAGGAAGGGAAGACCAGCTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGATCTGGTACTGGAGG AAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTTCCTACCAGCACCTGAGGTCAACAGAATCACACAACAC TGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAaaaaaa ]
[+] EMBL OSC4571 [ GCTGGAG AAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTATCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGAT CAGGAAGGGAAGACCAGCTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGATCTGGTACTGGAGGAAAGAA CGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTT CTACCAGCACCTGAGGTCAACAGAATCACACAACACTTGAA CCTCAAGGGGATGCTTCTGCAGCCAT ]
[-] EMBL CB964628 [ CCTGAGGTCAACAGAATCACACAACAC TGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGACANTGTGTTGCCTTGTTGGGACATGATGTGATGAACTGTATTTGATTATAATCCACGGCAT ]
[-] EMBL BU673389 [ CCTGAGGTCAACAGAATCACACAACAC TGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGACAATGTGTTGCCTTGTTGGGACATGATGTGATGAACTGTATTTGATTATAATCCACGGCAT ]
consensusID : consensus_14267#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 694 fasta sequence
[ATGCCACCGNTAATGTTTTCGTNATGCCCTCGGAAGTCCGAAACACTTGGCCAAGTAGTCCTGGAGTCCATGTCATCTGAAGTCCCGGTCGTTCCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGNTCAGGAAGGGAAGACCAGCTTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGNCAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGATCTGGTACTGGAGGAAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTTCCTACCAGCACCTGAGGTCAACAGAATCACACAACACTGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGNCAATGTGTTGCCTTGTTGGGACATGATGTGATGAACTGTATTTGATTATAATCCACGGCATCAACACATCAAGATGCTATTGTGCACGCAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU108181 [ATGCCACCGNTAATGTTTTCGTNATGCCCTCGGAAGTCCGAAACACTTGGCCAAGTAGTCCTGGAGTCCATGTCATCTGAAGTCCCGGTCGTTCCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGNTCAGGAAGGGAAGACCAGCTTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTGGCAAGATTCAGCTATTGCTGACGGACAAGGAATTCAGAGNCAACATGGGGATGACGGCTAGAGCCGAGATGGAGAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGATCTGGTACTGGAGGAAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGATGTTCCTACCAGCACCTGAGGTCAACAGAATCACACAACACTGAAGCCTCAAGGGGATGCTTCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGTCAATAGGTGAGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTTGTTGCCTGTATTGTTGTAGTGGNCAATGTGTTGCCTTGTTGGGACATGATGTGATGAACTGTATTTGATTATAATCCACGGCATCAACACATCAAGATGCTATTGTGCACGCAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_14267#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 513 fasta sequence
[GGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACGGCGAGCCTGAAAAACCATTGATAATCCATGTAGGACGCTTTGGGCGTGAAAAGAACTTGGATTTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGAGAAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTCTCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGNNNGTGCTGGTGGTGTTCCTGATATANTNNNNNAAGATCANNNNNGGAAGACCAGCNNCCTGTTCACCCNNNNAGANNNNNNANNCTNTCTTGGCANNNNNNNNNNATTGNCTGACGGACAAGNNNNNNNNNNNNNNNTG]
[+] EMBL CF196703 [GGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACGGCGAGCCTGAAAAACCATTGATAATCCATGTAGGACGCTTTGGGCGTGAAAAGAACTTGGATTTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGAGAAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTCTCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGNNNGTGCTGGTGGTGTTCCTGATATANTNNNNNAAGATCANNNNNGGAAGACCAGCNNCCTGTTCACCCNNNNAGANNNNNNANNCTNTCTTGGCANNNNNNNNNNATTGNCTGACGGACAAGNNNNNNNNNNNNNNNTG]
[+] EMBL CF196631 [GGTGTTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACGGCGAGCCTGAAAAACCATTGATAATCCATGTAGGACGCTTTGGGCGTGAAAAGAACTTGGATTTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAGATGGACCATACAGGAGTGAGCTGGAGAAGATGTTTGAGGGGATGCCTGCCGTGTTCACTGGAATGATGCAAGGCGAAGAGCTCTCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGCCCTCGGAGTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCGGTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGANGATCANNNNNGGAAGACCAGCTTCCTGTTCACCCCANNNNNNNTNNNNNNNNGTCTTGGCANNNNNcn ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14267#0 ACCACAACACCGTCGACTCGAGGCGCACGCAAACGCCGGTAGCGAGGAGAAGGATTGCTT 60
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 CTTCTTTTTTTTTTTGTGTGTGTGCTGTGTTCTTGGGTTTCTTGGCAATGGTGATTGGGG 120
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 CCGAGATCAAGGACGAGATGGAGGAGGCGCCGCCGCTGCTGCTCGACGAGGCCGCGCGCC 180
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 CTCGCCGCGTCGCGCTCTTCGTCGAGCCGTCTCCGTTCGCTTACATCTCTGGGTACAAGA 240
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 ACCGGTTTCAGAACTTCATCAAGCACTTGCGCGAAATGGGGGATGAGGTGATTGTTGTGA 300
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 CCAACCATGAGGGGGTTCCCCAAGAATTCCATGGTGCCAAGGTTATTGGTTCATGGAGCT 360
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 TTCCCTGTCCAATGTATGGAAAAGTTCCTCTCTCGCTGGCACTCAGTCCTAGGATTATTT 420
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 CGGAGGTTGCAAAGTTCAAGCCTGACATCATTCATGCATCCTCACCTGGAATTATGGTTT 480
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 TTGGGGCACTTGCTATTGCTAAACTGCTCGGTGTCCCTCTAGTGATGTCCTATCACACCC 540
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 ATGTCCCAGTATACATTCCAAGATATACATTTAGCTGGCTTGTAGAGCCAATGTGGCAAG 600
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 TCATAAGGTTCCTTCATAGAGCTGCTGATCTAACATTAGTGCCATCTGTTGCTATCAGCA 660
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 AAGATTTTGAAACTGCCCATGTTATATCAGCTAATAGAATACGCCTTTGGAACAAAGGTG 720
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 TTGATTCAGCCAGTTTCCATCCCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTG 780
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 ACGGTGAGCCTGAAAAACCATTGATAATCCATGTAGGACGCTTTGGGCGTGAAAAGAACT 840
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 TGGATTTTCTGAAAACGGTAATGGATAGGCTGCCTGGAGTAAGAATTGCATTTATTGGAG 900
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 ATGGACCATACAGGAGTGAGCTGGAGAAGATGTTTGAGGGGATGCCTGCCGTGTTCACTG 960
consensus_14267#1 ------------------------------------------------------------
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 GAATGATGCAAGGCGAAGAGCTATCACAGGCATATGCCAGCGGTGATGTTTTCGTGATGC 1020
consensus_14267#1 ---------------------------------ATGCCACCGNTAATGTTTTCGTNATGC 27
consensus_14267#2 ----------------------------------------------------GGTGTTGA 8
** **
consensus_14267#0 CCTCGGA-GTCCGAAACACTTGGTCAAGTAGTCCTGGAGTCCATGTCATCTGGAGTCCCG 1079
consensus_14267#1 CCTCGGAAGTCCGAAACACTTGGCCAAGTAGTCCTGGAGTCCATGTCATCTGAAGTCCCG 87
consensus_14267#2 TTCAGCCAGTTTCCATC-CCAAGTTCCGCAGTCACGAAATGCGAGTTAGACTAAGTGACG 67
* ** * * * * * **** * * * * ** * *** **
consensus_14267#0 GTCGTTGCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGATCAGGAAGGGAAG 1139
consensus_14267#1 GTCGTTCCAGCTCGTGCTGGTGGTGTTCCTGATATAATTCCAGAAGNTCAGGAAGGGAAG 147
consensus_14267#2 GCGAGCCTGA--AAAACCATTGATAATCCATGTAGGACGCTTTGGGCGTGAAAAG---AA 122
* * ** * *** ** * * * *** *
consensus_14267#0 ACCAGCTT-CCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTG-GCAAGATT--CAGCT 1195
consensus_14267#1 ACCAGCTTTCCTGTTCACCCCAGGAGACCTCGAAGACTGTCTTG-GCAAGATT--CAGCT 204
consensus_14267#2 CTTGGATTTTCTGAAAACGGTAATGGAT-----AGGCTGCCTGGAGTAAGAATTGCATTT 177
* ** *** ** * ** ** *** ** * * **** * ** *
consensus_14267#0 ATTGCTGACGGACAAGGAATTCAGAGACAACATGGGGATGACGGCTAGAGCCGAGATGGA 1255
consensus_14267#1 ATTGCTGACGGACAAGGAATTCAGAGNCAACATGGGGATGACGGCTAGAGCCGAGATGGA 264
consensus_14267#2 ATTGGAGATGGACCA----TACAGGAGTGAGCTGGAGAAGATGTTTGAGGGGATGCCTGC 233
**** ** **** * * *** * *** ** ** * * * * *
consensus_14267#0 GAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGAT 1315
consensus_14267#1 GAAGTGCGACTGGAGAGCAGCTTCCAAGAAGATCCGCAACGAGTTCTACAATGCTGCGAT 324
consensus_14267#2 CGTGTTC-ACTGGAATGATGCAAGGCGAAGAGCTCTCACAGGCATATGCCA-GCGGTGAT 291
** * ****** * ** * * ** * * * * * ** * ***
consensus_14267#0 CTGGTACTGGAGGAAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGAT 1375
consensus_14267#1 CTGGTACTGGAGGAAGAAGCGCGCAGAATTGATCAAACCGTTGCAGTGGCTGGCGCAGAT 384
consensus_14267#2 GTTTTCGTG-------ATGCCCTCGGAGTC---CGAAACACTTGGTCAAGTAGTCCTGGA 341
* * ** * ** * * ** * * ** * * * * * *
consensus_14267#0 GTTCCTACCAGCACCTGAGGTCAACAGAATCACACAACACTGAAGCCTCAAGGGGATGCT 1435
consensus_14267#1 GTTCCTACCAGCACCTGAGGTCAACAGAATCACACAACACTGAAGCCTCAAGGGGATGCT 444
consensus_14267#2 GTCCATGTCA---TCTGGAGTCCCGGTCGTTGCAGNNNGT----GCT----GGTGGTGTT 390
** * * ** *** *** * ** ** ** * ** *
consensus_14267#0 TCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGT-CAATAGGTG 1494
consensus_14267#1 TCTGCAGCCATGATCCGGTCCTTGTAAATTTCTGATCTATAGTGCAGTGT-CAATAGGTG 503
consensus_14267#2 CCTGATATANTNNNNNAAG----ATCANNNNNGGAAGACCAGCNNCCTGTTCACCCNNNN 446
*** * * * ** ** *** **
consensus_14267#0 AGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTT 1554
consensus_14267#1 AGATAGTTCCTCTTTTTTTTGTATGGAATTGGAATTGTGAATGGTATGGCAAAGCCATTT 563
consensus_14267#2 AGANNNNNNANNCTNTCTTGGCANNNNNNNNNNATTGN--CTGACG-GACAAGNNNNNNN 503
*** * * ** * * **** ** * ***
consensus_14267#0 GTTGCCTGTATTGTTGTAGTGGACAATGTGTTGCCTTGTTGGGACATGATGTGATGAACT 1614
consensus_14267#1 GTTGCCTGTATTGTTGTAGTGGNCAATGTGTTGCCTTGTTGGGACATGATGTGATGAACT 623
consensus_14267#2 NNNNNNNNTG-------------------------------------------------- 513
*
consensus_14267#0 GTATTTGATTATAATCCACGGCATCAACACATCAAGATGCTATTGTGCACGCAATGAAAA 1674
consensus_14267#1 GTATTTGATTATAATCCACGGCATCAACACATCAAGATGCTATTGTGCACGCAAAAAAAA 683
consensus_14267#2 ------------------------------------------------------------
consensus_14267#0 GTTTGGTATCAACTCT 1690
consensus_14267#1 AAAAAAAAAAA----- 694
consensus_14267#2 ----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||