These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14299#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2169 fasta sequence [GGTGCTCGCCGTGTCCGTGGCGTGGCAGGGCTCCACCATGGCCGCCGACTACTGGCTCGCCTACCAGACCTCCGGCGACGCGTTCCGGCCCGCCCTCTTCATCAAGGTGTACGCCATCATCGCCGCCGTGTCCGTGGTGATCGTCACGGTGAGGTCCCTCCTCGTCGCCACCATCGGCCTCGACACCGCCAACATCTTCTTCAGGCAGGTCCTCAGCACCATCCTCCACGCCCCCATGTCCTTCTTCGACACCACCCCCTCCGGCAGGATCCTCACCAGGGCGTCATCGGACCAGACGAACGTGGATCTGTTGTTGCCGTTCTTCGTGTGGATGAGCGTTTCCATGTACATCACGGTGATAGGCGTGGTGATCATGACGTGTCAGGTGGCCTGGCCTTCGGTCGTCCTCGTCGTACCCTTGCTCATGCTCAACCTCTGGTTCCGGAAATACTACATCTCGACGTCGAGGGAGCTGACCAGGCTGGAGTCGATCACCAAGGCTCCCGTGATCCACCACTTCTCGGAGACGGTGCAGGGCGTCATGGTGATCAGGTGCTTCCAGAAGCAGGACAACTTCTTCCACGAGAACCTCAGCCGCCTCAACGCCAGCCTCAAGATGGACTTCCACAACAATGCAGCCAACGAGTGGCTCGGCCTGCGGCTGGAGCTCATCGGAAGCCTTGTCCTCTGCGTCACCGCCTTGCTCATGGTCACGTTGCCGTCCAACATCGTCCTTCCAGAGTATGTCGGTTTGTCGCTCTCGTATGGCCTGTCACTTAACTCGGTGATGTTCTGGGCCATTTGGTTGAGTTGCAATATTGAAAACAAAATGGTCTCAGTTG-AGAGGATAAAGC-AGTTCACGAACATCCCATCTGAGGCAGAATGGAGGATCAAGGAGACTGCTCCCTCTGCAAACTGGCCACACAAAGGCGACATCGATATCATTGATCTCAAGTTTCGGTACAGGCACAACACTCCCCTAGTGCTGAAGGGCATCACGCTAAGCATACACGGAGGGGAGAAGATTGGTGTGGTTGGGAGAACTGGCAGTGGGAAATCGACGCTGATCCAGGCATTGTTCAGAATAGTTGAGCCTTCTGAGGGGAAGATAATCATCGACGGCATCGACATCTGCACGCTAGGGCTCCATGATCTGAGGTCTCGGNTCGGCATTATCCCTCAGGAGCCTGTCCTCTTCGAAGGGACGATTCGAAGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCGAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAA-TTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAGATGAGCTGATTTTTGACTCAGAATTTGGGAGGAAATAAGGGCGACGGATGGCCACCCAAGCTGATCTAGTGCTCTCTCCACACTGTGAGATGCTTTTCAATTTTTATGAGCAGTGAGCCTGTGAGTAGTAAGTAGCGTGAGAAGGCACCAGGAAAAGAAATACG-AAAAAAAAAACGCAGGTTTCGGTGTATTGTTTAGCACGTGTTCAGCGCGTGCACTGTGAAAGCTATGATGCTTTGTGTAACAACGATGAGATGAAGTTAATTCAATTAATATATTGTTACCGTGGAAAATTTTCAGTCAA---AATTAAAGGAGACTTCATAAATCCCTAGACCGTGTTGGAGAAAAAAAAATCCCTAGACCGATGCATAAATAATCATAAGGTTTAGGCTTGTAACTTGTTAGTCTTGAATATATATGTCCACCCAAACCATATTGATAAATCTATTGAAGATTTGAAGGCGAGTTATTTGCAAGGTAAAAAAAAAAAGA] [+] EMBL CB639331 [GGTGCTCGCCGTGTCCGTGGCGTGGCAGGGCTCCACCATGGCCGCCGACTACTGGCTCGCCTACCAGACCTCCGGCGACGCGTTCCGGCCCGCCCTCTTCATCAAGGTGTACGCCATCATCGCCGCCGTGTCCGTGGTGATCGTCACGGTGAGGTCCCTCCTCGTCGCCACCATCGGCCTCGACACCGCCAACATCTTCTTCAGGCAGGTCCTCAGCACCATCCTCCACGCCCCCATGTCCTTCTTCGACACCACCCCCTCCGGCAGGATCCTCACCAGGGCGTCATCGGACCAGACGAACGTGGATCTGTTGTTGCCGTTCTTCGTGTGGATGAGCGTTTCCATGTACATCACGGTGATAGGCGTGGTGATCATGACGTGTCAGGTGGCCTGGCCTTCGGTCGTCCTCGTCGTACCCTTGCTCATGCTCAACCTCTGGTTCCGGAAATACTACATCTCGACGTCGAGGGAGCTGACCAGGCTGGAGTCGATCACCAAGGCTCCCGTGATCCACCACTTCTCGGAGACGGTGCAGGGCGT ] [+] EMBL CB641161 [ GGCCGCCAACTACTGGCTGGCCTACCAGACCTCCTGAGACGCGTTACGGCCCGCCCTCTTCATCAAGGTGAACACCATTATCGCCGCCATGTCCGTGGTGATCGTCACGGTGAGGTGGGTGCTCGTCGCCACCATAGGCCTTGACACCGCCAACATCTTCTTCAGGCAGGTCCTCAGCACCATCCTCCACGCCCCCATGTCCTTCTTCGACACCACCCCCTCCGGCAGGATCCTCACCAGGGCGTCATCGGACCAGACGAACGTGGATCTGTTGTTGCCGTTCTTCGTGTGGATGAGCGTTTCCATGTACATCACGGTGATAGGCGTGGTGATCATGACGTGTCAGGTGGCCTGGCCTTCAGTCGTCCTCGTCGTACCCTTGCTCATGCTCAACCTCTGGTTCCGGAAATACTACATCTCGACGTCGAGGGAGCTGACCAGGCTGGAGTCGATCACCAAGGCTC ] [+] EMBL CB656063 [ CGGACCAGACGAACGTGGATCTGTTGTTGCCGTTCTTCGTGTGGATGAGCGTTTCCATGTACATCACGGTGATAGGCGTGGTGATCATGACGTGTCAGGTGGCCTGGCCTTCGGTCGTCCTCGTCGTACCCTTGCTCATGCTCAACCTCTGGTTCCGGAAATACTACATCTCGACGTCGAGGGAGCTGACCAGGCTGGAGTCGATCACCAAGGCTCCCGTGATCCACCACTTCTCGGAGACGGTGCAGGGCGTCATGGTGATCAGGTGCTTCCAGAAGCAGGACAACTTCTTCCACGAGAACCTCAGCCGCCTCAACGCCAGCCTCAAGATGGACTTCCACAACAATGCAGCCAACGAGTGGCTCGGCCTGCGGCTGGAGCTCATCGGAAGCCTTGTCCTCTGCGTCACCGCCTTGCTCATGGTCACGTTGCCGTCCAACATCGTCCTTCCAGAGTATGTCGGTTTGTCGCTCTCGTATGGCCTGTCACTTAACTCGGTGATGTTCTGGGCCATTTGGTTGAGTTGCAATATTGAAAACAAAATGGTCTCAGTTG AGAGGATAAAGC AGTTCACGAACATCCCATCTGAGGCAGAATGGAGGATCAAGGAGACTGCTCCCTCTGCAAACTGGCCACACAAAGGCGACATCGATATCATTGATCTCAAGTTTCGGTACAGGCACAACACTCCCCTAGTGCTGAAGGGCATCACGCTAAGCATACACGGAGGGGAGAAGATTGGTGTGGTTGGGAGAACTGGCAGTGGGAAATCGACGCTGATCCAGGCATTGTTCAGAATAGT ] [+] EMBL CB679504 [ CCCTTGCTCATGCTCAACCTCTGGTTCCGGAAATACTACATCTCGACGTCGAGGGAGCTGACCAGGCTGGAGTCGATCACCAAGGCTCCCGTGATCCACCACTTCTCGGAGACGGTGCAGGGCGTCATGGTGATCAGGTGCTTCCAGAAGCAGGACAACTTCTTCCACGAGAACCTCAGCCGCCTCAACGCCAGCCTCAAGATGGACTTCCACAACAATGCAGCCAACGAGTGGCTCGGCCTGCGGCTGGAGCTCATCGGAAGCCTTGTCCTCTGCGTCACCGCCTTGCTCATGGTCACGTTGCCGTCCAACATCGTCCTTCCAGAGTATGTCGGTTTGTCGCTCTCGTATGGCCTGTCACTTAACTCGGTGATGTTCTGGGCCATTTGGTTGAGTTGCAATATTGAAAACAAAATGGTCTCAGTTG AGAGGATAAAGC AGTTCACGAACATCCCATCTGAGGCAGAATGGAGGATCAAGGAGACTGCTCCCTCTGCAAACTGGCCACACAAAGGCGACATCGATATCATTGATCTCAAGTTTCGGTACAGGCACAACACTCCCCTAGTGCTGAAGGGCATCACGCTAAGCATACACGGAGGGGAGAAGATTGGTGTGGTTGGGAGAACTGGCAGTGGGAAATCGACGCTGATCCAGGCATTGTTCAGAATAGTTGAGCCTTCTGAGGGGAAGATAATCATCGACGGCATCGACATCTGCACGCTAGGGCTCCATGATCTGAGGTCTCGGNTCG ] [+] EMBL OSS4649A [ GCTGACCAGGCTGGAGTCGATCACCAAGGCTCCCGTGATCCACCACTTCTCGGAGACGGTGCAGGGCGTCATGGTGATCAGGTGCTTCCAGAAGCAGGACAACTTCTTCCACGAGAACCTCAGCCGCCTCAACGCCAGCCTCAAGATGGACTTCCACAACAATGCAGCCAACGAGTGGCTCGGCCTGCGGCTGGAGCTCATCGGAAGCCTTGTCCTCTGCGTCACCGCCTTGCTCATGGTCACGTTGCCGTCCAACATCGTCCTTCCAGAGTATGTCGGTTTGTCGCTCTCGTATGGCCTGTCACTTAACTCGGTGATGTTCTGGGGCATTTGGTTGAGTTGCAATATTGAAAACAAAATGGTCTCAGTTGAAGAGGATAAAGCAAGTTCACGGANATCCCATCTGAG ] [+] EMBL CA753997 [ TTTCGGTACAGGCACAACACTCCCCTAGTGCTGAAGGGCATCACGCTAAGCATACTCGGAGGGGAGAAGATTGGTGTGGTTGGGAGAACTGGCAGTGGGAAATCGACGCTGATCCAGGCATTGTTCAGAATAGTTGAGCCTTCTGAGGGGAAGATAATCATCGACGGCATCGACATCTGCACGCTAGGGCTCCATGATCTGAGGTCTCGGTTCGGCATTATCCCTCAGGAGCCTGTCCTCTTCGAAGGGACGATTCGAAGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCAACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCAAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCTTCGCGCACAGGATACCGACGGGCATGGACTGCGACAGAGTCCTGGGCATCGATGCCGGCCTAACGAAGGAATTTTGA AGCCCTGCCAACCTGATCGAAAGGCCATCACTGGTT ] [-] EMBL CB655629 [ CAGGAGCCTGTCCTCTTCGAAGGGACGATTTGAAGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCGAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTTTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAA TTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAGATGAGCTGATTTTTGACTCAGAATTTGGGAGGAAATAAGGGCGACGGATGGCCACCCAAGCTGATCTAGTGCTCTCTCCACACTGTGAGATGCTTTTCAATTTTTATGAGCAGTGAGCCTGTGAGTAGTAAGTAGCGTGAGAAGGCACCAGGAAAAGAAATACG AAAAAAAAAACGCAGGTTTCGGTGTATTGTTTAGCACGTGTTCAGCGCGTGCACTGTGAAAGCTATGATGCTTTGTGTAACAACGATGAGATGAAGTTAATTCAATTAATATATTG ] [-] EMBL CB633976 [ CGGAGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCAAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAA TTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAGATGAGCTGATTTTTGACTCAGAATTTGGGAGGAAATAAGGGCGACGGATGGCCACCCAAGCTGATCTAGTGCTCTCTCCACACTGTGAGATGCTTTTCAATTTTTATGAGCAGTGAGCCTGTGAGTAGTAAGTAGCGTGAGAAGGCACCAGGAAAAGAAATACG AAAAAAAAACGCAGGTTTCGGTGTATTGTTTAGCACGTGTTCAGCGCGTGCACTGTGAAAGCTATGATGCTTTGTGTAACAACGATGAGATGAAGTTAATTCAATTAATATATTGTTACCGTGGAAAA ] [-] EMBL CB679505 [ GAAGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCGAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAA TTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAGATGAGCTGATTTTTGACTCAGAATTTGGGAGGAAATAAGGGCGACGGATGGCCACCCAAGCTGATCTAGTGCTCTCTCCACACTGTGAGATGCTTTTCAATTTTTATGAGCAGTGAGCCTGTGAGTAGTAAGTAGCGTGAGAAGGCACCAGGAAAAGAAATACG AAAAAAAAAACGCAGGTTTCGGTGTATTGTTTAGCACGTGTTCAGCGCGTGCACTGTGAAAGCTATGATGCTTTGTGTAACAACGATGAGATGAAGTTAATACGATTAATATATTGTTACCGTGGAAAATTTTCAGT ] [+] EMBL CB000976 [ AGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCGAACCGATGTCTTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAA TTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAGATGAGCT ] [-] EMBL CB633904 [ GACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCAAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAA TTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAGATGAGCTGATTTTTGACTCAGAATTTGGGAGGAAATAAGGGCGACGGATGGCCACCCAAGCTGATCTAGTGCTCTCTCCACACTGTGAGATGCTTTTCAATTTTTATGAGCAGTGAGCCTGTGAGTAGTAAGTAGCGTGAGAAGGCACCAGGAAAAGAAATACG AAAAAAAAACGCAGATTTCGGTGTATTGTTTAGCGAGAGTTCAGCGCGTGCACTGTGAAAGCTATGATGCTTTGTGTAACAACGATGAGATGAAGTTAATTCAAAGGATATATTGTTACCGTGGAAAATTTTCAGTCAA AATTAAAGG ] [-] EMBL CF325919 [ TGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCCCGAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAA TTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAGATGAGCTGATTTTTGACTCAGAATTTGGGAGGAAATAAGGGCGACGGATGGCCACCCAAGCTGATCTAGTGCTCTCTCCACACTGTGAGATGCTTTTCAATTTTTATGAGCAGTGAGCCTGTGAGTAGTAAGTAGCGTGAGAAGGCACCAGGAAAAGAAATACG AAAAAAAAAACGCAGGTTTCGGTGTATTGTTTAGCACGTGTTCAGCGCGTGCACTGTGAAAGCTATGATGCTTTGTGTAACAACGATGAGATGAAGTTAATTCAATTAATATATTGTTACCGTGGAAAAaa ] [-] EMBL CB656064 [ GATCATCCGGGAAGAGTTCTCAGCCTGCACCATCATCAGCATGGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATCGATGCCGGCCTAGCGAAGGAA TTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACTGTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAGATGAGCTGATTTTTGACTCAGAATTTGGGAGGAAATAAGGGCGACGGATGGCCACCCAAGCTGATTTAGTGCTCTCTCCACACTGTGAGATGCTTTTCAATTTTTATGAGCAGTGAGCCTGTGAGTAGTAAGTAGCGTGAGAAGGCACCAGGAAAAGAAATACGAAAAAAAAAAACGCAGGTTTCGGTGTATTGTTTAGCACGTGTTCAGCGCGTGCACTGTGAAAGCTATGATGCTTTGTGTAACAACGATGAGATGAAGTTAATTCAATTAATATATTGTTACCGTGGAAAATTTTCAGTCAAGGGCAGTAA AGACTTCATAAATCCCTAGACCGTGTTGGAGAAAAAAAAATCCCTAGACCGATGCATAAATAATCATAAGGTTTAGGCTTGTAACTTGTTAGTCTTGAATATATATGTCCACCCAAACCATATTGATAAATCTATTGAAGATTTGAAGGCGAGTTATTTGCAAGGTAAAAAAAAAAAGA] consensusID : consensus_14299#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 947 fasta sequence [CGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCNNAAACCCCCACCACCCCCACGCCTCCGTCATGTACTGCCTGTACACCGTGAAGCTCACGTGCCCGCTCGCCCGCTCCTCCGCCTTGATCAGCCGCGACGACGCCTTCGCCGTCTTGATGTCGCCGTTCGACGACGCGCTCTCCCTCTCCTTGGGCGCGGACGACGGCTGGCGGGAGAGCGGCAGGTTGCCCGCGGGCGACGGCGAAGGACCGGGCGCGGCGCTCTCGACGAGCTCCATGGAGGACTCGTGGGCCGCGACGAGCGCGGCGAAGTCGGTGCCGGTGCGGAGGAGGTCGTGGTAGCGGCCGGACTGGGCGACGGCGCCGTCGCGCATGACGTAGATGGCGTGGGCGTTGCGGAGGAAGTCGAGCTGGTGAGTGACGAGGAGGACGGTCTTGTCCCTGAGGGCGCCGCGGACGCAGTCGCGGAAGATGTCGGAGCCGGTGTGGGCGTCGACGGCGCTAAAGACGTCGTCGAGGAGGTAGACGTCGGCGTCCTGGTAGACGGCGCGGGCGAGCTGGATGCGCTGCTTCTGCCCGCCGCTCAGGTTGATGCCGCGCTCCCCGATCTCCGTCTGGTCCCCGAACTCCATCATCTCCAGGTCCTTGTCCAGGGAGCACACCCGGATCGCCTCCCTGTACCGCTCCCGCTGCATCCCCCGCCCGAACAGGATGTTCTCCTCGATCGTCCCGTTCTGGATCCACGCCGTCTGCGCGGCACGAGG] [-] EMBL CB633975 [CGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCAGGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGCATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGGCCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGATTCNNAAACCCCCACCACCCCCACGCCTCCGTCATGTACTGCCTGTACACCGTGAAGCTCACGTGCCCGCTCGCCCGCTCCTCCGCCTTGATCAGCCGCGACGACGCCTTCGCCGTCTTGATGTCGCCGTTCGACGACGCGCTCTCCCTCTCCTTGGGCGCGGACGACGGCTGGCGGGAGAGCGGCAGGTTGCCCGCGGGCGACGGCGAAGGACCGGGCGCGGCGCTCTCGACGAGCTCCATGGAGGACTCGTGGGCCGCGACGAGCGCGGCGAAGTCGGTGCCGGTGCGGAGGAGGTCGTGGTAGCGGCCGGACTGGGCGACGGCGCCGTCGCGCATGACGTAGATGGCGTGGGCGTTGCGGAGGAAGTCGAGCTGGTGAGTGACGAGGAGGACGGTCTTGTCCCTGAGGGCGCCGCGGACGCAGTCGCGGAAGATGTCGGAGCCGGTGTGGGCGTCGACGGCGCTAAAGACGTCGTCGAGGAGGTAGACGTCGGCGTCCTGGTAGACGGCGCG ] [-] EMBL CB633903 [ CCTGTACACCGTGAAGCTCACGTGCCCGCTCGCCCGCTCCTCCGCCTTGATCAGCCGCGACGACGCCTTCGCCGTCTTGATGTCGCCGTTCGACGACGCGCTCTCCCTCTCCTTGGGCGCGGACGACGGCTGGCGGGAGAGCGGCAGGTTGCCCGCGGGCGACGGCGAAGGACCGGGCGCGGCGCTCTCGACGAGCTCCATGGAGGACTCGTGGGCCGCGACGAGCGCGGCGAAGTCGGTGCCGGTGCGGAGGAGGTCGTGGTAGCGGCCGGACTGGGCGACGGCGCCGTCGCGCATGACGTAGATGGCGTGGGCGTTGCGGAGGAAGTCGAGCTGGTGAGTGACGAGGAGGACGGTCTTGTCCCTGAGGGCGCCGCGGACGCAGTCGCGGAAGATGTCGGAGCCGGTGTGGGCGTCGACGGCGCTAAAGACGTCGTCGAGGAGGTAGACGTCGGCGTCCTGGTAGACGGCGCGGGCGAGCTGGATGCGCTGCTTCTGCCCGCCGCTCAGGTTGATGCCGCGCTCCCCGATCTCCGTCTGGTCCCCGAACTCCATCATCTCCAGGTCCTTGTCCAGGGAGCACACCCGGATCGCCTCCCTGTACCGCTCCCGCTGCATCCCCCGCCCGAACAGGATGTTCTCCTCGATCGTCCCGTTCTGGATCCACGCCGTCTGCGCGGCACGAGG] consensusID : consensus_14299#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 208 fasta sequence [GCCAAGTGAAAAGACTTTCAATAGAATGCCACTGAGACACAGTGTTGCGGAGAAAAAAAAGAATGCCCCTGAGACACAGATGGCAATGAAATGAATCATGAAGGGTTTGAGGGCTTGTAACTTGTTAGTCTTGAATATATATGTCCAACCCAAACCATATTGATAAATCTATTGAAGATTTGAAGGCGAGTTATTTGCAAAAAAAAAA] [+] EMBL BI810433 [GCCAAGTGAAAAGACTTTCAATAGAATGCCACTGAGACACAGTGTTGCGGAGAAAAAAAAGAATGCCCCTGAGACACAGATGGCAATGAAATGAATCATGAAGGGTTTGAGGGCTTGTAACTTGTTAGTCTTGAATATATATGTCCAACCCAAACCATATTGATAAATCTATTGAAGATTTGAAGGCGAGTTATTTGCAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14299#0 GGTGCTCGCCGTGTCCGTGGCGTGGCAGGGCTCCACCATGGCCGCCGACTACTGGCTCGC 60 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CTACCAGACCTCCGGCGACGCGTTCCGGCCCGCCCTCTTCATCAAGGTGTACGCCATCAT 120 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CGCCGCCGTGTCCGTGGTGATCGTCACGGTGAGGTCCCTCCTCGTCGCCACCATCGGCCT 180 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CGACACCGCCAACATCTTCTTCAGGCAGGTCCTCAGCACCATCCTCCACGCCCCCATGTC 240 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CTTCTTCGACACCACCCCCTCCGGCAGGATCCTCACCAGGGCGTCATCGGACCAGACGAA 300 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CGTGGATCTGTTGTTGCCGTTCTTCGTGTGGATGAGCGTTTCCATGTACATCACGGTGAT 360 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 AGGCGTGGTGATCATGACGTGTCAGGTGGCCTGGCCTTCGGTCGTCCTCGTCGTACCCTT 420 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 GCTCATGCTCAACCTCTGGTTCCGGAAATACTACATCTCGACGTCGAGGGAGCTGACCAG 480 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 GCTGGAGTCGATCACCAAGGCTCCCGTGATCCACCACTTCTCGGAGACGGTGCAGGGCGT 540 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CATGGTGATCAGGTGCTTCCAGAAGCAGGACAACTTCTTCCACGAGAACCTCAGCCGCCT 600 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CAACGCCAGCCTCAAGATGGACTTCCACAACAATGCAGCCAACGAGTGGCTCGGCCTGCG 660 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 GCTGGAGCTCATCGGAAGCCTTGTCCTCTGCGTCACCGCCTTGCTCATGGTCACGTTGCC 720 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 GTCCAACATCGTCCTTCCAGAGTATGTCGGTTTGTCGCTCTCGTATGGCCTGTCACTTAA 780 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CTCGGTGATGTTCTGGGCCATTTGGTTGAGTTGCAATATTGAAAACAAAATGGTCTCAGT 840 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 TGAGAGGATAAAGCAGTTCACGAACATCCCATCTGAGGCAGAATGGAGGATCAAGGAGAC 900 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 TGCTCCCTCTGCAAACTGGCCACACAAAGGCGACATCGATATCATTGATCTCAAGTTTCG 960 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 GTACAGGCACAACACTCCCCTAGTGCTGAAGGGCATCACGCTAAGCATACACGGAGGGGA 1020 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 GAAGATTGGTGTGGTTGGGAGAACTGGCAGTGGGAAATCGACGCTGATCCAGGCATTGTT 1080 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 CAGAATAGTTGAGCCTTCTGAGGGGAAGATAATCATCGACGGCATCGACATCTGCACGCT 1140 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 AGGGCTCCATGATCTGAGGTCTCGGNTCGGCATTATCCCTCAGGAGCCTGTCCTCTTCGA 1200 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ------------------------------------------------------------ consensus_14299#0 AGGGACGATTCGAAGCAACATCGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCA 1260 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ---------------------CGACCCGCTTCAGCTGTACTCTGATGATGAAATTTGGCA 39 consensus_14299#0 GGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGC 1320 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 GGCCTTGGAACGTTGTCAGCTGAAAGATGCAGTGACTTCAAAACCCGAGAAGCTTGATGC 99 consensus_14299#0 ATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGG 1380 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 ATCAGTTGTCGACAACGGCGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTGTGCCTTGG 159 consensus_14299#0 CCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGA 1440 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 CCGAGTGATGCTGAAGCACAGCAGGATACTGTTCATGGACGAGGCCACTGCTTCAGTGGA 219 consensus_14299#0 TTCCCGAACCGATGCCGTGATTCAGAAGATCATCCGGGAAGAGTTCTCAGCCTGCACCAT 1500 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 TTCNNAAACCCCCACCACC-CCCACGCCTCCGTCATGTACTGCCTGTACACCGTGAAGCT 278 consensus_14299#0 CATCAGCATCGCGCACAGGATACCGACGGTCATGGACTGCGACAGAGTCCTGGTCATC-- 1558 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 CACGTGCCCGCTCGCCCGCTCCTCCGCCTTGATCAGCCGCGACGACGCCTTCGCCGTCTT 338 consensus_14299#0 GATGCCGGC-CTAGCGAAGGAATTTGACAGTCCTGCAAACCTGATCGAAAGGCCATCACT 1617 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 GATGTCGCCGTTCGACGACGCGCTCTCCCTCTCCTTGGGCGCGGACGACGGCTGGCGGGA 398 consensus_14299#0 GTTTGGAGCATTGGTTCAAGAGTACGCAACCCGGTCATCCGATATATAACTAATGATGAG 1677 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 GAGCGGCAGGTTGCCCGCGGGCGACGGCGAAGGACCGGGCGCGGCGCTCTCGACGAGCTC 458 consensus_14299#0 ATGAGCTGATTTTTGACTCAGAATTTGGGAGGAAATAAGGGCGACGGATGGCCACCCAAG 1737 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 CATGGAGGACTCGTGGGCCGCGACGAGCGCGGCGAAGTCGGTGCCGGT--GCGGAGGAGG 516 consensus_14299#0 CTGATCTAGTGCTCTCTCCACACTGTGA-GATGCTTTTCAATTTTTATGAGCAGTGAGCC 1796 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 TCGTGGTAGCGGCCGGACTGGGCGACGGCGCCGTCGCGCATGACGTAGATGGCGTGGGCG 576 consensus_14299#0 TGTGAGTAGTAAGTAGCGTGAGAAGGCACCAGGAAAAGAAATACGAAAAAAAAAACGCAG 1856 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 TTGCGGAGGAAGTCGAGCTGGTGAGTGACGAGGAGGACGGTCTTGTCCCTGAGGGCGCCG 636 consensus_14299#0 --------GTTTCGGTGTATTGTTTAGCACGTGTTCAGCGCGTGCACTGTGAAAGCTATG 1908 consensus_14299#2 ------------------------------------------------------------ consensus_14299#1 CGGACGCAGTCGCGGAAGATGTCGGAGCCGGTGTGGGCGTCGACGGCGCTAAAGACGTCG 696 consensus_14299#0 ATGCTTTGTGTAACAACGATGAGATG--AAGTTAATTCAATTAATATATTGTTACCGTGG 1966 consensus_14299#2 ------------------GCCAAGTG--AAAAGACTT---TCAATAGAATGCCACTGAGA 37 consensus_14299#1 TCGAGGAGGTAGACGTCGGCGTCCTGGTAGACGGCGCGGGCGAGCTGGATGC-GCTGCTT 755 ** * * ** * * consensus_14299#0 AAAATTTTCAGTCAAAATTAAAGGAGACTTCATAAATCCCTAGACCGTGTTGGAGAAAAA 2026 consensus_14299#2 CACAGTGTTGCGGAGAAAAAAAAGA--------ATGCCCCT-----------GAGACACA 78 consensus_14299#1 CTGCCCGCCGCTCAGGTTGATGCCGCGCTCCCCGATCTCCGTCTGGTCCCCGAACTCCAT 815 * * ** * consensus_14299#0 AAAATCCCTAGACCGATGCATAAATAATCATAAGGTTTAGGCTTGTAACTTGTTAGTCTT 2086 consensus_14299#2 GATGGCAATGAAATGAATCATGAAGGGTT-TGAGG-----GCTTGTAACTTGTTAGTCTT 132 consensus_14299#1 CATCTCCAGGTCCTTGTCCAGGGAGCACACCCGGA-------TCGCCTCCCTGTACCGCT 868 * * ** * * * * * ** * consensus_14299#0 GAATATATATGTCCA-CCCAAACCATATTGATAAATCTATTGAA--GATTTGAAGGCGAG 2143 consensus_14299#2 GAATATATATGTCCAACCCAAACCATATTGATAAATCTATTGAA--GATTTGAAGGCGAG 190 consensus_14299#1 CCCGCTGCATCCCCCGCCCGAACAGGATGTTCTCCTCGATCGTCCCGTTCTGGATCCACG 928 * ** ** *** *** ** ** ** * * * ** * * * consensus_14299#0 TTATTTGCAAGGTAAAAAAAAAAAGA 2169 consensus_14299#2 TTATTTGCAAAAAAAAAA-------- 208 consensus_14299#1 CCGTCTGCGCGGCACGAGG------- 947 * *** * * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||