cluster # 143

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 143 cluster # 143 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_143#0 length = 2498 sequences # 2
consensusID : consensus_143#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2498
fasta sequence
                              [TCTCCTCCACATCCGGACTCTCGCTATCAAATTTACGTAAGCACAGTGAGAAAAATAATTAGCAGGGCCACCAGCATACTGTTGGCGTACAGCTGCAAATACCTGTCGAGCTAATCTTGGTTAAAATGTTGGTTTAGATTCTGTTGCTTAATTGCTGGTGAGGAGGAGCACTCACTATATAGCTCAATCCATCTTCCTCTGCAAAACGTACGCACGACACTCTGGTTGCGATCGATTATCACTCCCTGATCGCGAGTTCTTGGTCTGCGAGCGTCTGCAATTAAGGGAAGAGTTCCTCTTTGTTTTGACGAGGATCGAGGATTGTTTGGACGAACCAGCAGCAGCGTACGTGCCAATTTCATTGATAGTCGCTGTATCTGATTTACAGGAAAAATACATACAACAGTGTGTGGTAAAGTATACTACTATTACTGGAGTACTAATTAATGGAAGAGACCCCTCTGCCATCCGGGAAGAACTTCAGGAGCCAGCTTGCTGCTGCAGCGAGGAGCATCAATTGGACGTATGCCATATTTTGGTCCATTTCAACCAGCCGCCCAGGAGTTCTGACTTGGAAGGACGGCTTCTACAACGGCGAGATAAAGACGAGGAAGATCACGAACTCCATGAACCTCACGGCCGACGAGCTGGTCCTGCAGAGAAGCGAGCAGCTGAGGGAGCTCTACGACTCTCTCCTCTCCGGCGAGTGCGGCCACCGAGCGAGGAGGCCCGTCGCTGCGCTGTTGCCGGAAGATCTCGGGGACACGGAATGGTACTACGTCGTCTGCATGACCTACGCCTTCGGCCCCGGCCAAGGGTTGCCAGGCAAAAGCTTCGCAAGCAATGAATTTGTTTGGCTGACAAACGCTCAGTCTGCAGATAGAAAACTATTCCATCGCGCGCTTATAGCAAAGAGTGCATCTATTAAGACAATCGTCTGCGTGCCATTTATCATGCATGGTGTCCTTGAGCTCGGGACCACTGATCCGATTTCGGAGGACCCGGCTCTCGTCGACCGTATCGCGGCGTCGTTCTGGGATACGCCGCCCCGCGCGGCGTTCTCGTCGGAGGCGGGAGACGCCGACATCGTCGTCTTCGAAGACCTCGACCATGGCAACGCCGCCGTCGAAGCGACGACGACGACGGTCCCGGGGGAGCCACACGCGGTAGCCGGCGGCGAGGTCGCCGAGTGCGAGCCCAACGCCGACAACGACCTCGAGCAGATCACCATGGACGACATCGGCGAGCTCTACAGCCTCTGCGAAGAGCTGGACGTCGTGCGCCCTCTCGACGACGACAGTAGCAGCTGGGCGGTCGCGGATCCCTGGTCGTCCTTTCAGCTAGTTCTGACGTCTTCTCCGGCGCCGGATCAGGCGCCGGCGGCGGAAGCTACTGACGTCGACGACGTCGTCGTCGCCGCTTTAGACGGTAGCTCCATTGATGGATCTTGCAGGCCGTCGCCGTCGAGTTTTGTGGCGTGGAAGAGGACGGCGGACTCGGACGAGGTGCAGGCCGTGCCGCTCATCAGCGGAGAGCCGCCACAGAAGTTGCTGAAGAAAGCTGTCGCCGGAGCCGGTGCCTGGATGAACAATGGTGACAGCAGCGCGGCGGCGATGACGACTCAAGAAAGCAGCATCAAGAACCATGTCATGTCAGAGAGAAGGCGCCGGGAGAAGCTCAACGAGATGTTCCTGATTCTCAAATCAGTTGTCCCGTCCATTCACAAGGTGGACAAAGCATCCATTCTCGCAGAAACGATAGCCTACCTCAAAGAGCTGGAGAAAAGAGTGGAAGAGCTGGAATCCAGCAGCCAACCATCGCCATGTCCATTGGAAACAAGAAGCAGGCGAAAGTGCCGTGAGATCACTGGGAAGAAGGTTTCTGCAGGAGCGAAGAGAAAGGCGCCGGCGCCGGAGGTGGCCAGCGACGACGACACCGACGGGGAGCGGCGCCATTGTGTGAGCAACGTGAACGTCACCATCATGGACAACAAGGAGGTTCTCCTCGAGCTGCAATGCCAGTGGAAGGAATTGCTGATGACGAGAGTGTTCGACGCGATCAAGGGAGTCTCCCTGGATGTCCTCTCGGTGCAGGCATCAACATCGGATGGTCTCCTTGGACTGAAGATACAGGCCAAGTTTGCCTCATCTGCTGCCGTCGAACCTGGGATGATTACAGAAGCTCTCCGGAAAGCTATAGCAAGCTAGCTAGCTAGAAGGTTGAGATCAGTATCGTCTTGGTCATTTGCTCTCATCTTGTTTAGGAGGTACCGGGAAATAAATCTTGTCGCTCTGATCAGTGCCTCCTTACTAGTCTCGTGATCTGTTGCAAGTAATAGTTAGACATGCATATATATCATACAACAACGTTTGATCTTGCATGGTAGGATATATATGTACACCACATTTCTTATATCTTTACTCCTTTAAAATTCAGTGAGGATGGTAAGTGATGAATCTGCCACCCCATCACCAACTCCCTAAAATTCTGAAAAAAAA]

[+] EMBL OS39860              [TCTCCTCCACATCCGGACTCTCGCTATCAAATTTACGTAAGCACAGTGAGAAAAATAATTAGCAGGGCCACCAGCATACTGTTGGCGTACAGCTGCAAATACCTGTCGAGCTAATCTTGGTTAAAATGTTGGTTTAGATTCTGTTGCTTAATTGCTGGTGAGGAGGAGCACTCACTATATAGCTCAATCCATCTTCCTCTGCAAAACGTACGCACGACACTCTGGTTGCGATCGATTATCACTCCCTGATCGCGAGTTCTTGGTCTGCGAGCGTCTGCAATTAAGGGAAGAGTTCCTCTTTGTTTTGACGAGGATCGAGGATTGTTTGGACGAACCAGCAGCAGCGTACGTGCCAATTTCATTGATAGTCGCTGTATCTGATTTACAGGAAAAATACATACAACAGTGTGTGGTAAAGTATACTACTATTACTGGAGTACTAATTAATGGAAGAGACCCCTCTGCCATCCGGGAAGAACTTCAGGAGCCAGCTTGCTGCTGCAGCGAGGAGCATCAATTGGACGTATGCCATATTTTGGTCCATTTCAACCAGCCGCCCAGGAGTTCTGACTTGGAAGGACGGCTTCTACAACGGCGAGATAAAGACGAGGAAGATCACGAACTCCATGAACCTCACGGCCGACGAGCTGGTCCTGCAGAGAAGCGAGCAGCTGAGGGAGCTCTACGACTCTCTCCTCTCCGGCGAGTGCGGCCACCGAGCGAGGAGGCCCGTCGCTGCGCTGTTGCCGGAAGATCTCGGGGACACGGAATGGTACTACGTCGTCTGCATGACCTACGCCTTCGGCCCCGGCCAAGGGTTGCCAGGCAAAAGCTTCGCAAGCAATGAATTTGTTTGGCTGACAAACGCTCAGTCTGCAGATAGAAAACTATTCCATCGCGCGCTTATAGCAAAGAGTGCATCTATTAAGACAATCGTCTGCGTGCCATTTATCATGCATGGTGTCCTTGAGCTCGGGACCACTGATCCGATTTCGGAGGACCCGGCTCTCGTCGACCGTATCGCGGCGTCGTTCTGGGATACGCCGCCCCGCGCGGCGTTCTCGTCGGAGGCGGGAGACGCCGACATCGTCGTCTTCGAAGACCTCGACCATGGCAACGCCGCCGTCGAAGCGACGACGACGACGGTCCCGGGGGAGCCACACGCGGTAGCCGGCGGCGAGGTCGCCGAGTGCGAGCCCAACGCCGACAACGACCTCGAGCAGATCACCATGGACGACATCGGCGAGCTCTACAGCCTCTGCGAAGAGCTGGACGTCGTGCGCCCTCTCGACGACGACAGTAGCAGCTGGGCGGTCGCGGATCCCTGGTCGTCCTTTCAGCTAGTTCTGACGTCTTCTCCGGCGCCGGATCAGGCGCCGGCGGCGGAAGCTACTGACGTCGACGACGTCGTCGTCGCCGCTTTAGACGGTAGCTCCATTGATGGATCTTGCAGGCCGTCGCCGTCGAGTTTTGTGGCGTGGAAGAGGACGGCGGACTCGGACGAGGTGCAGGCCGTGCCGCTCATCAGCGGAGAGCCGCCACAGAAGTTGCTGAAGAAAGCTGTCGCCGGAGCCGGTGCCTGGATGAACAATGGTGACAGCAGCGCGGCGGCGATGACGACTCAAGAAAGCAGCATCAAGAACCATGTCATGTCAGAGAGAAGGCGCCGGGAGAAGCTCAACGAGATGTTCCTGATTCTCAAATCAGTTGTCCCGTCCATTCACAAGGTGGACAAAGCATCCATTCTCGCAGAAACGATAGCCTACCTCAAAGAGCTGGAGAAAAGAGTGGAAGAGCTGGAATCCAGCAGCCAACCATCGCCATGTCCATTGGAAACAAGAAGCAGGCGAAAGTGCCGTGAGATCACTGGGAAGAAGGTTTCTGCAGGAGCGAAGAGAAAGGCGCCGGCGCCGGAGGTGGCCAGCGACGACGACACCGACGGGGAGCGGCGCCATTGTGTGAGCAACGTGAACGTCACCATCATGGACAACAAGGAGGTTCTCCTCGAGCTGCAATGCCAGTGGAAGGAATTGCTGATGACGAGAGTGTTCGACGCGATCAAGGGAGTCTCCCTGGATGTCCTCTCGGTGCAGGCATCAACATCGGATGGTCTCCTTGGACTGAAGATACAGGCCAAGTTTGCCTCATCTGCTGCCGTCGAACCTGGGATGATTACAGAAGCTCTCCGGAAAGCTATAGCAAGCTAGCTAGCTAGAAGGTTGAGATCAGTATCGTCTTGGTCATTTGCTCTCATCTTGTTTAGGAGGTACCGGGAAATAAATCTTGTCGCTCTGATCAGTGCCTCCTTACTAGTCTCGTGATCTGTTGCAAGTAATAGTTAGACATGCATATATATCATACAACAACGTTTGATCTTGCATGGTAGGATATATATGTACACCACATTTCTTATATCTTTACTCCTTTAAAATTCAGTGAGGATGGTAAGTGATGAATCTGCCACCCCATCACCAACTCCCTAAAATTCTGAAAAAAAA]
[+] EMBL AB021079             [                                                                                                                                                                                                                               GGTTGCGATCGATTATCACTCCCTGATCGCGAGTTCTTGGTCTGCGAGCGTCTGCAATTAAGGGAAGAGTTCCTCTTTGTTTTGACGAGGATCGAGGATTGTTTGGACGAACCAGCAGCAGCGTACGTGCCAATTTCATTGATAGTCGCTGTATCTGATTTACAGGAAAAATACATACAACAGTGTGTGGTAAAGTATACTACTATTACTGGAGTACTAATTAATGGAAGAGACCCCTCTGCCATCCGGGAAGAACTTCAGGAGCCAGCTTGCTGCTGCAGCGAGGAGCATCAATTGGACGTATGCCATATTTTGGTCCATTTCAACCAGCCGCCCAGGAGTTCTGACTTGGAAGGACGGCTTCTACAACGGCGAGATAAAGACGAGGAAGATCACGAACTCCATGAACCTCACGGCCGACGAGCTGGTCCTGCAGAGAAGCGAGCAGCTGAGGGAGCTCTACGACTCTCTCCTCTCCGGCGAGTGCGGCCACCGAGCGAGGAGGCCCGTCGCTGCACTGTTGCCGGAAGATCTCGCGGACACGGAATGGTACTACGTCGTCTGCATGACCTACGCCTTCGGCCCCCGCCAAGGGTTGCCAGGCAAAAGCTTCGCAAGCAATGAATTTGTTTGGCTGACAAACGCTCAGTCTGCAGATAGAAAACTATTCCATCGCGCGCTTATAGCAAAGAGTGCATCTATTAAGACAATCGTCTGCGTGCCATTTATCATGCATGGTGTCCTTGAGCTCGGGACCACTGATCCGATTTCGGAGGACCCGGCTCTCGTCGACCGTATCGCGGCGTCGTTCTGGGATACGCCGCCCCGCGCGGCGTTCTCGTCGGAGGCGGGAGACGCCGACATCGTCGTCTTCGAAGACCTCGACCATGGCAACGCCGCCGTCGAAGCGACGACGACGACGGTCCCGGGGGAGCCACACGCGGTAGCCGGCGGCGAGGTCGCCGAGTGCGAGCCCAACTCCGACAACGACCTCGAGCAGATCACCATGGACGACATCGGCGAGCTCTACAGCCTCTGCGAGGAGCTGGACGTCGTGCGCCCTCTCGACGACGACAGTAGCAGCTGGGCGGTCGCGGATCCCTGGTCGTCCTTTCAGCTAGTTCCGACGTCTTCTCCGGCGCCGGATCAGGCGCCGGCGGCGGAAGCTACTGACGTCGACGACGTCGTCGTCGCCGCTTTAGACAGTAGCTCCATTGATGGATCTTGCAGGCCGTCGCCGTCGAGTTTTGTGGCGTGGAAGAGGACGGCGGACTCGGACGAGGTGCAGGCCGTGCCGCTCATCAGCGGAGAGCCGCCACAGAAGTTGCTGAAGAAAGCTGTCGCCGGAGCCGGTGCCTGGATGAACAATGGTGACAGCAGCGCGGCGGCGATGACGACTCAAGGAAGCAGCATCAAGAACCATGTCATGTCAGAGAGAAGGCGCCGGGAGAAGCTCAACGAGATGTTCCTGATTCTCAAATCAGTTGTCCCGTCCATTCACAGGGTGGACAAAGCATCCATTCTCGCAGAAACGATAGCCTACCTCAAAGAGCTGGAGAAAAGAGTGGAAGAGCTGGAATCCAGCAGCCAACCATCGCCATGTCCATTGGAAACAAGAAGCAGGCGAAAGTGCCGTGAGATCACTGGGAAGAAGGTTTCTGCAGGAGCGAAGAGAAAGGCGCCGGCGCCGGAGGTGGCCAGCGACGACGACACCGACGGGGAGCGGCGCCATTGTGTGAGCAACGTGAACGTCACCATCATGGACAACAAGGAGGTTCTCCTCGAGCTGCAATGCCAGTGGAAGGAATTGCTGATGACGAGAGTGTTCGACGCGATCAAGGGAGTCTCCCTGGA  TCCTCTCGGTGCAGGCATCAACATCGGATGGTCTCCTTGGACTGAAGATACAAGCCAAGTTTGCCTCATCTGCTGCCGTCGAACCTGGGATGATTACAGAAGCTCTCCGGAAAGCTATAGCAAGCTAGCTAGCTAGAAGGTTGAGATCAGTATCGTCTTGGTCATTTGCTCTCATCTTGTTTAGGAGGTACCGGGAAATAAATCTTGTCGCTCTGATCAGTGCCTCCTTACTAGTCTCGTGATCTGTTGTAAGTAATAGTTAGACATGCATATATATCATACAACAACGTTTGAT                                                                                                                            ]




>consensus_143#0
TCTCCTCCACATCCGGACTCTCGCTATCAAATTTACGTAAGCACAGTGAGAAAAATAATT
AGCAGGGCCACCAGCATACTGTTGGCGTACAGCTGCAAATACCTGTCGAGCTAATCTTGG
TTAAAATGTTGGTTTAGATTCTGTTGCTTAATTGCTGGTGAGGAGGAGCACTCACTATAT
AGCTCAATCCATCTTCCTCTGCAAAACGTACGCACGACACTCTGGTTGCGATCGATTATC
ACTCCCTGATCGCGAGTTCTTGGTCTGCGAGCGTCTGCAATTAAGGGAAGAGTTCCTCTT
TGTTTTGACGAGGATCGAGGATTGTTTGGACGAACCAGCAGCAGCGTACGTGCCAATTTC
ATTGATAGTCGCTGTATCTGATTTACAGGAAAAATACATACAACAGTGTGTGGTAAAGTA
TACTACTATTACTGGAGTACTAATTAATGGAAGAGACCCCTCTGCCATCCGGGAAGAACT
TCAGGAGCCAGCTTGCTGCTGCAGCGAGGAGCATCAATTGGACGTATGCCATATTTTGGT
CCATTTCAACCAGCCGCCCAGGAGTTCTGACTTGGAAGGACGGCTTCTACAACGGCGAGA
TAAAGACGAGGAAGATCACGAACTCCATGAACCTCACGGCCGACGAGCTGGTCCTGCAGA
GAAGCGAGCAGCTGAGGGAGCTCTACGACTCTCTCCTCTCCGGCGAGTGCGGCCACCGAG
CGAGGAGGCCCGTCGCTGCGCTGTTGCCGGAAGATCTCGGGGACACGGAATGGTACTACG
TCGTCTGCATGACCTACGCCTTCGGCCCCGGCCAAGGGTTGCCAGGCAAAAGCTTCGCAA
GCAATGAATTTGTTTGGCTGACAAACGCTCAGTCTGCAGATAGAAAACTATTCCATCGCG
CGCTTATAGCAAAGAGTGCATCTATTAAGACAATCGTCTGCGTGCCATTTATCATGCATG
GTGTCCTTGAGCTCGGGACCACTGATCCGATTTCGGAGGACCCGGCTCTCGTCGACCGTA
TCGCGGCGTCGTTCTGGGATACGCCGCCCCGCGCGGCGTTCTCGTCGGAGGCGGGAGACG
CCGACATCGTCGTCTTCGAAGACCTCGACCATGGCAACGCCGCCGTCGAAGCGACGACGA
CGACGGTCCCGGGGGAGCCACACGCGGTAGCCGGCGGCGAGGTCGCCGAGTGCGAGCCCA
ACGCCGACAACGACCTCGAGCAGATCACCATGGACGACATCGGCGAGCTCTACAGCCTCT
GCGAAGAGCTGGACGTCGTGCGCCCTCTCGACGACGACAGTAGCAGCTGGGCGGTCGCGG
ATCCCTGGTCGTCCTTTCAGCTAGTTCTGACGTCTTCTCCGGCGCCGGATCAGGCGCCGG
CGGCGGAAGCTACTGACGTCGACGACGTCGTCGTCGCCGCTTTAGACGGTAGCTCCATTG
ATGGATCTTGCAGGCCGTCGCCGTCGAGTTTTGTGGCGTGGAAGAGGACGGCGGACTCGG
ACGAGGTGCAGGCCGTGCCGCTCATCAGCGGAGAGCCGCCACAGAAGTTGCTGAAGAAAG
CTGTCGCCGGAGCCGGTGCCTGGATGAACAATGGTGACAGCAGCGCGGCGGCGATGACGA
CTCAAGAAAGCAGCATCAAGAACCATGTCATGTCAGAGAGAAGGCGCCGGGAGAAGCTCA
ACGAGATGTTCCTGATTCTCAAATCAGTTGTCCCGTCCATTCACAAGGTGGACAAAGCAT
CCATTCTCGCAGAAACGATAGCCTACCTCAAAGAGCTGGAGAAAAGAGTGGAAGAGCTGG
AATCCAGCAGCCAACCATCGCCATGTCCATTGGAAACAAGAAGCAGGCGAAAGTGCCGTG
AGATCACTGGGAAGAAGGTTTCTGCAGGAGCGAAGAGAAAGGCGCCGGCGCCGGAGGTGG
CCAGCGACGACGACACCGACGGGGAGCGGCGCCATTGTGTGAGCAACGTGAACGTCACCA
TCATGGACAACAAGGAGGTTCTCCTCGAGCTGCAATGCCAGTGGAAGGAATTGCTGATGA
CGAGAGTGTTCGACGCGATCAAGGGAGTCTCCCTGGATGTCCTCTCGGTGCAGGCATCAA
CATCGGATGGTCTCCTTGGACTGAAGATACAGGCCAAGTTTGCCTCATCTGCTGCCGTCG
AACCTGGGATGATTACAGAAGCTCTCCGGAAAGCTATAGCAAGCTAGCTAGCTAGAAGGT
TGAGATCAGTATCGTCTTGGTCATTTGCTCTCATCTTGTTTAGGAGGTACCGGGAAATAA
ATCTTGTCGCTCTGATCAGTGCCTCCTTACTAGTCTCGTGATCTGTTGCAAGTAATAGTT
AGACATGCATATATATCATACAACAACGTTTGATCTTGCATGGTAGGATATATATGTACA
CCACATTTCTTATATCTTTACTCCTTTAAAATTCAGTGAGGATGGTAAGTGATGAATCTG
CCACCCCATCACCAACTCCCTAAAATTCTGAAAAAAAA
clustalw multiple alignements is not computed in this case