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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14313#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 923 fasta sequence
[CTTCTCCCTCCCTCCCTCCTCGATCCCATTCCCCCCCCCCCTCTTATCTCTCTCCCCAATCTCCTCCACACAGCAATGGCGAAGCCGAGGCTGCTCGCCCTCCTCCTCCTCGCCGCCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCGTGCTCCCCCCGACCGACCCCAACTCGCCGCCGGCGCACTGACCGCCGCCGACCACCGTCGATCTACGGTCTCCTTCCACCCCGGTCAGCCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTAATTTGGACGATTAATTGTTACTAGAACGTATACACGTGCGTGTGTGTAATGTTGATGTGTCTTGCATTTCGTCCCCGTTGTATCACAACCGATCCATGTAATTTGCAATAAAATCATCAATAATAATGTGTCATTGTTGGATGTAAAAAAAAAAAAAAAAAAAAAAAAACTCG]
[+] EMBL CF336740 [CTTCTCCCTCCCTCCCTCCTCGATCCCATTCCCCCCCCCCCTCTTATCTCTCTCCCCAATCTCCTCCACACAGCAATGGCGAAGCCGAGGCTGCTCGCCCTCCTCCTCCTCGCCGCCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCGTGCTCCCCCCGACCGACCCCAACTCGCCGCCGGCGCACTGACCGCCGCCGACCACCGTCGATCTACGGTCTCCTTCCACCCCGGTCAGCCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTACTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTACAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGG ]
[+] EMBL CA755114 [ CATTCCCCCCCCCCCTCTTATCTCTCTCCCCAATCTCCTCCACACAGCAATGGCGAAGCCGAGGCTGCTCGCCCTCCTCCTCCTCGCCGCCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCGTGCTCCCCCCGACCGACCCCAACTCGCCGCCGGCGCACTGACCGCCGCCGACCACCGTCGATCTACGGTCTCCTTCCACCCCGGTCAGCCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCc ]
[+] EMBL CB668783 [ ATTCCCCCCCCCCCTCTTATCTCTCTCCCCAATCTCCTCCACACAGCAATGGCGAAGCCGAGGCTGCTCGCCCTCCTCCTCCTCGCCGCCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCGTGCTCCCCCCGACCGACCCCAACTCGCCGCCGGCGCACTGACCGCCGCCGACCACCGGCGATCTACGGTCTCCTTCCACCCCGGTCAGCCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTAATTTGGACGATTAATTGTTACTAGAACGTATACACGTGCGTGTGTGTA ]
[+] EMBL AK073672 [ CCACACAGCAATGGCGAAGCCGAGGCTGCTCGCCCTCCTCCTCCTCGCCGCCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCGTGCTCCCCCCGACCGACCCCAACTCGCCGCCGGCGCACTGACCGCCGCCGACCACCGTCGATCTACGGTCTCCTTCCACCCCGGTCAGCCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAAT ]
[+] EMBL CB000353 [ CTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCGTGCTCCCCCCGACCGACCCCAACTCGCCGCCGGCGCACTGACCGCCGCCGACCACCGTCGATCTACGGTCTCCTTCCACCCCGGTCAGCCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTT ]
[-] EMBL CB668784 [ CGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCGTGCTCCCCCCGACCGACCCCAACTCGCCGCCGGCGCACTGACCGCCGCCGACCACCGTCGATCTACGGTCTCCTTCCACCCCGGTCAGCCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTAATTTGGACGATTAATTGTTACTAGAACGTATTCAGGAGCGTGTGTGTAATGTTGATGTGTCTTGCATTTCGTCCCCGTTGTATCACAACCGATCCATGTAATTTAAAGGAAAATCATCAATAATAATGTGTCATTG ]
[-] EMBL CF325464 [ CTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTAATTTGGACGATTAATTGTTACTAGAACGTATACACGTGCGTGTGTGTAATGTTGATGTGTCTTGCATTTCGTCCCCGTTGTATCACAACCGATCCATGTAATTTGCAATAAAATCATCAATAATAATGTGTCATTGTTGGATGTAAAAAAAAAAAAAAAAAAAAAAAAACTCG]
[-] EMBL CF336739 [ AATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTAATTTGGACGATTAATTGTTACTAGAACGTATACACGTGCGTGTGTGTAATGTTGATGTGTCTTGCATTTCGTCCCCGTTGTATCACAACCGATCCATGTAATTTGCAATAAAATCATCAATAATAATGTGTCATTGTTGGATGTAAAAAA ]
consensusID : consensus_14313#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 600 fasta sequence
[GCAGAGGATTCGGCACGAGGCTTTTTGTCCTTTCTCCATCCTTCTTCTCCTCTCTCTGTCTGTCTGCGGCGGCGGGAGGGGCGTGGATGGGAGGTGCGGCGGGGGTGGACGGCGTGGAGGCGGCAGGTGGGCCTCCAACAGATCCGATGGCGTGGAGGCAGCTGTTGGCCCGGCGGGGGTGGGAGGGTCTTTTCTTACTTTCACTTATTCTCTCTCATATCCATATACCTTCGACATACTCACTACTTCTTCCATCCCAACCCTCAACTATCTGTTTACTACTCTCTCCTTCCCCTCTCTCTTAAATACTTTTCCCCCTATATTCCATCAATCTCCCATTATTTACAACTCACTTTCTCTCAATCTCTACCTTTCTTTTTCATATAACTATTCACCCCTTACTTCATCCCTTTCTACTTCTCTTCTTTACGATCAACTCCTCTATTACTCTTCTCTACCCGTTCCTCTTTCCTCACTTCATCGTCATTAGTATTCTTTCTCTTACGTTCTTCATACTTATATCTTAATTCTCTCACCTCCTCTATTTCTATCTTCTCTTCTACTCTCTTCCATCTTCCTATCCTTATCTCTATTCACTAA]
[+] EMBL CA756516 [GCAGAGGATTCGGCACGAGGCTTTTTGTCCTTTCTCCATCCTTCTTCTCCTCTCTCTGTCTGTCTGCGGCGGCGGGAGGGGCGTGGATGGGAGGTGCGGCGGGGGTGGACGGCGTGGAGGCGGCAGGTGGGCCTCCAACAGATCCGATGGCGTGGAGGCAGCTGTTGGCCCGGCGGGGGTGGGAGGGTCTTTTCTTACTTTCACTTATTCTCTCTCATATCCATATACCTTCGACATACTCACTACTTCTTCCATCCCAACCCTCAACTATCTGTTTACTACTCTCTCCTTCCCCTCTCTCTTAAATACTTTTCCCCCTATATTCCATCAATCTCCCATTATTTACAACTCACTTTCTCTCAATCTCTACCTTTCTTTTTCATATAACTATTCACCCCTTACTTCATCCCTTTCTACTTCTCTTCTTTACGATCAACTCCTCTATTACTCTTCTCTACCCGTTCCTCTTTCCTCACTTCATCGTCATTAGTATTCTTTCTCTTACGTTCTTCATACTTATATCTTAATTCTCTCACCTCCTCTATTTCTATCTTCTCTTCTACTCTCTTCCATCTTCCTATCCTTATCTCTATTCACTAA]
consensusID : consensus_14313#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 582 fasta sequence
[CACTGACCCCCCG-ACCACCGTCGATCTACGTTC-TCCTTCCACCCCGGTCA-CCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGA--ACATGTTTTGTTTGATTAATTTGGACGATTAATTGTTACTAGAACGTATACACGTGCGTGTGTGTAATGTTGATGTGTCCTGCATTTCGTCCCCGTTGTATCACACCGATCCATGTTATTTGCAATAAAATCATCATAATAATGTGTCATTGTTGGATGTAAAAA]
[+] EMBL BI798534 [CACTGACCCCCCG ACCACCGTCGATCTACGTTC TCCTTCCACCCCGGTCA CCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGA ACATGTTTTGTTTGATTAATTTGGACGATTAATTGTTACTAGAACGTATACACGTGCGTGTGTGTAATGTTGATGTGTCCTGCATTTCGTCCCCGTTGTATCACACCGATCCATGTTATTTGCAATAAAATCATCATAATAATGTGTCATTGTTGGATGTAAAAA]
[+] EMBL BI810989 [ CCGCCGTACCACCGTCGATCTACGGTCGTCCTTCCACCCCGGTCATCCGGCGACGTATCTGCGTAT AATACACTATATATACTGTACTACCGTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTAAGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAATAAGCTGACGGCGTTCTTCTCCTTGGGCATATACGGT CAGTGACCGTATACATGTACGCGTACATACGTATACATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCCATTATTGAAGTAGACCTAGCTAGACTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACACATGTTTTGTTTGATTAATTTGGACGATTAATTGTTACTAGAAaaaa ]
consensusID : consensus_14313#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence
[GGATGCTTGCCCTCCTCCTCCTCGCCGCCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCTACGGAGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCCGGCCGGGCGCGGCGCCCTCGCGTCTGCCAGATCTGGCGGTGGGAAGGGAGGCGGCGCGCCCCAACGGCGGGACGAGAGGCAGCGACGCCCTCCCTCCGGCGGATCGGGAGGGGGGGCATGCGGCGGCGGTCCAGCGGCAAGAGGTGGTGGTGGCCCGACGGCGGCGCTGGTGACTGGTAGTGGTGGCGCCCTCCCTCCGTCGGATCTGGAGGTGGTGCATGCGGCAGTGGTCCGGCAGCAGGAGGTGGTGGTGACCCGGCGGCGGCAGTGGTGACCGGCAGTGGTGGCGCCCTCCTTTGATTTTTCTTGATTTTTGTTATTAGTGAAAGATTGAAGCTGACGCATCGAGCCATCTTTTATGTAGTTTGTGAAT]
[+] EMBL CB643059 [GGATGCTTGCCCTCCTCCTCCTCGCCGCCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCTACGGAGGCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCCGGCCGGGCGCGGCGCCCTCGCGTCTGCCAGATCTGGCGGTGGGAAGGGAGGCGGCGCGCCCCAACGGCGGGACGAGAGGCAGCGACGCCCTCCCTCCGGCGGATCGGGAGGGGGGGCATGCGGCGGCGGTCCAGCGGCAAGAGGTGGTGGTGGCCCGACGGCGGCGCTGGTGACTGGTAGTGGTGGCGCCCTCCCTCCGTCGGATCTGGAGGTGGTGCATGCGGCAGTGGTCCGGCAGCAGGAGGTGGTGGTGACCCGGCGGCGGCAGTGGTGACCGGCAGTGGTGGCGCCCTCCTTTGATTTTTCTTGATTTTTGTTATTAGTGAAAGATTGAAGCTGACGCATCGAGCCATCTTTTATGTAGTTTGTGAAT]
consensusID : consensus_14313#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 523 fasta sequence
[TCTGCGGCGGCGGGAGGGGCGTGGATGGGAGGTGCGGCGGGGGTGGACGGCGTGGAGGCGGCAGGTGGGCCTCCGCCAGATCCGATGGCGTGGAGGCAGCTGTGGCCCGGCGGGGGTGGGAGGGGCGGCCGGCCGGGCGCGGCGCCCTCCCGTCTGCCAGATCTGGCGGCGGGAAGGGAGGCGGCGCGCCCCGACGGCGGGACGAGAGGCAGCGACGCCCTCCCTCCGTCAGATCTGGAGGGGGGGCATGCGGCGGCGGTCCAGCGGCAGGAGGTGGTGGTGGCCCGACGGCGGCGCTGGTGACTGGTAGTGGTGGCGCCCTCCCTCCGTCGGATCTGGAGGTGGTGCATGCGGCAGTGGTCCGGCAGCAGGAGGTGGTGGTGACCCGGCGGCGGCAGTGGTGACCGGCAGTGGTGGCGCCCTCCTTTGATTTTTCTTGATTTTTGTTATTAGTGAAAGATTGAAGCTGACGCATCGAGCCATCTTTTATGTAGTTTGTGAATGATTTTTGTGAAAGATTCGA]
[+] EMBL AK063590 [TCTGCGGCGGCGGGAGGGGCGTGGATGGGAGGTGCGGCGGGGGTGGACGGCGTGGAGGCGGCAGGTGGGCCTCCGCCAGATCCGATGGCGTGGAGGCAGCTGTGGCCCGGCGGGGGTGGGAGGGGCGGCCGGCCGGGCGCGGCGCCCTCCCGTCTGCCAGATCTGGCGGCGGGAAGGGAGGCGGCGCGCCCCGACGGCGGGACGAGAGGCAGCGACGCCCTCCCTCCGTCAGATCTGGAGGGGGGGCATGCGGCGGCGGTCCAGCGGCAGGAGGTGGTGGTGGCCCGACGGCGGCGCTGGTGACTGGTAGTGGTGGCGCCCTCCCTCCGTCGGATCTGGAGGTGGTGCATGCGGCAGTGGTCCGGCAGCAGGAGGTGGTGGTGACCCGGCGGCGGCAGTGGTGACCGGCAGTGGTGGCGCCCTCCTTTGATTTTTCTTGATTTTTGTTATTAGTGAAAGATTGAAGCTGACGCATCGAGCCATCTTTTATGTAGTTTGTGAATGATTTTTGTGAAAGATTC ]
[-] EMBL CB643060 [ GGACGAGAGGCAGCGACGCCCTCCCTCCGTCAGATTTGGAGGGGGGGCATGCGGCGGCGGTCCAGCGGCAGGAGGTGGTGGTGGCCCGACGGCGGCGCTGGTGACTGGTAGTGGTGGCGCCCTCCCTCCGTCGGATTTGGAGGTGGTGCATGCGGCAGTGGTCCGGCAGCAGGAGGTGGTGGTGACCCGGCGGCGGCAGTGGTGACCGGCAGTGGTGGCGCCCTCCTTTGATTTTTCTTGATTTTTGTTATTAGTGAAAGATTGAAGCTGACGCATCGAGCCATCTTTTATGTAGTTTGTGAATGATTTTTGTGAAAaaaaaga]
consensusID : consensus_14313#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 315 fasta sequence
[CCCCCCCCTCTTATCTCTCTCCCCAATCTCCTCCACACAGCAATGGCGAACGANGNGCTGCTCGCCCTCCTCCTCCTCGCCGNCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAANGCCAACACCAANCCNGGGNGGNGGCGTGCTNNCGTGGACCGACCCTAACTCGTCGNCGGGNACTGANCGNNGNNGACCAACGTNGAT]
[+] EMBL OS0472A [CCCCCCCCTCTTATCTCTCTCCCCAATCTCCTCCACACAGCAATGGCGAACGANGNGCTGCTCGCCCTCCTCCTCCTCGCCGNCCTCCTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCGCGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTGGCGGACTACTCCGATCCCAANGCCAACACCAANCCNGGGNGGNGGCGTGCTNNCGTGGACCGACCCTAACTCGTCGNCGGGNACTGANCGNNGNNGACCAACGTNGAT]
consensusID : consensus_14313#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 254 fasta sequence
[GCTNACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGCCCGTATACATGTACGCGTACATACGTATACATGTACGCGTNTACGTATGCGCGGCGTACNCACTAGCCAATTATTGAAGTAGACCTAGNTAGANTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTAAAAAAAAAAAAAAAA]
[+] EMBL C98052 [GCTNACGGCGTTCTTCTCCTTGGGCATATACGGTGCAGTGCCCGTATACATGTACGCGTACATACGTATACATGTACGCGTNTACGTATGCGCGGCGTACNCACTAGCCAATTATTGAAGTAGACCTAGNTAGANTTGTGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCGTGTCTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14313#2 ------------------------------------------------------------
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 CTTCTCCCTCCCTCCCTCCTCGATCCCATTCCCCCCCCCCCTCTTATCTCTCTCCCCAAT 60
consensus_14313#5 ------------------------------------------------------------
consensus_14313#3 ------------------------------------------------------------
consensus_14313#4 ------------------------------------------------------------
consensus_14313#1 ------------------------------------------------------------
consensus_14313#2 ------------------------------------------------------------
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 CTCCTCCACACAGCAATGGCGAAGCCGAGGCTGCTCGCCCTCCTCCTCCTCGCCGCCCTC 120
consensus_14313#5 ------------------------------------------------------------
consensus_14313#3 ------------------------------------------------------------
consensus_14313#4 ------------------------------------------------------------
consensus_14313#1 ------------------------------------------------------------
consensus_14313#2 ------------------------------------------------------------
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 CTCCTCGCCCTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCAGCTGGTGAAGCCGGCG 180
consensus_14313#5 ------------------------------------------------------------
consensus_14313#3 ------------------------------------------------------------
consensus_14313#4 ------------------------------------------------------------
consensus_14313#1 ------------------------------------------------------------
consensus_14313#2 ------------------------------------------------------------
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 CGCCGCTACGGGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCGACGGTG 240
consensus_14313#5 ------------------------------------------------------------
consensus_14313#3 ------------------------------------------------------------
consensus_14313#4 ------------------------------------------------------------
consensus_14313#1 ------------------------------------------------------------
consensus_14313#2 ------------------------------------------------------------
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 GCGGACTACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGCGTGCTCCCCCCGACC 300
consensus_14313#5 ------------------------------------------------------------
consensus_14313#3 ------------------------------------------------------------
consensus_14313#4 ------------------------------------------------------------
consensus_14313#1 ------------------------------------------------------------
consensus_14313#2 ---------------------CACTGACCCCC--CGACCACCGTCGATCTACGTTCTCCT 37
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 GACCCCAACTCGCCGCCGGCGCACTGACCGCCGCCGACCACCGTCGATCTACGGTCTCCT 360
consensus_14313#5 ------------------------------------------------------------
consensus_14313#3 -------------------GGATGCTTGCCCTCCTCCTCCTCGCCGCCCTCCTCCTCGCC 41
consensus_14313#4 ------------------------------------------------------------
consensus_14313#1 --------GCAGAGGATTCGGCACGAGGCTTTTTGTCCTTTCTCCATCCTTCTTCTCCTC 52
consensus_14313#2 TCCACCCCGGTCA-CCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACC 96
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 TCCACCCCGGTCAGCCGGCGACGTATCTGCGTATAAATACACTATATATACTGTACTACC 420
consensus_14313#5 ------------------------------------------------------------
consensus_14313#3 CTCTCCTTCTCGCACGGGGAAGCGAAGGACGTGCA--GCTGGTGAAGCCGGCGCGCCGCT 99
consensus_14313#4 ----------TCTGCGGCGGCGGGAGGGGCGTGGATGGGAGGTGCGGCGGGGGTGG-ACG 49
consensus_14313#1 TCTCTGTCTGTCTGCGGCGGCGGGAGGGGCGTGGATGGGAGGTGCGGCGGGGGTGG-ACG 111
consensus_14313#2 GTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAATTA 156
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 GTATAAATACCTAGTAGTAGTAAATACGGCGTATAAATTCGGAATACATGTGCGTAA--- 477
consensus_14313#5 ---------------------------------------------CCCCCCCCTCTTATC 15
consensus_14313#3 ACG-GGCGGTGGCGCTCGGCCCTCCAGGCCGGCGATGGGATGGTGTCTACGGAGGCGGAC 158
consensus_14313#4 GCGTGGAGGCGGCAGGTGGGCCTCC--GCCA--GATCCGATGGCGT----GGAGGCAG-- 99
consensus_14313#1 GCGTGGAGGCGGCAGGTGGGCCTCCA----ACAGATCCGATGGCGT----GGAGGCAG-- 161
consensus_14313#2 AGCGTAATTAAGTAGTAGAGGAAGAGGAAGGATCGGAAT-----AAGCTGACGGCGTT-- 209
consensus_14313#6 ----------------------------------------------GCTNACGGCGTT-- 12
consensus_14313#0 -------TTAAGTAGTAGAGGAAGAGGAAGGATCGGAAT-----AAGCTGACGGCGTT-- 523
consensus_14313#5 TCTCTCCCCAATCTCCTCCACACAGCAATGGCGAACGAN-----GNGCTGCTCGCCCT-- 68
consensus_14313#3 TACTCCGATCCCAAGCCCAACACCAACCCCCGCGGCGGC-----CGGCCGGGCGCGGCGC 213
consensus_14313#4 ---------CTGTGGCCCGGCGGGGGTGGGAGGGGCGGC-----CGGCCGGGCGCGGCGC 145
consensus_14313#1 --------CTGTTGGCCCGGCGGGGGTGGGAGGGTCTTTTCTTACTTTCACTTATTCT-C 212
consensus_14313#2 CTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACA-TGTACGCGTACATACGTATAC 268
consensus_14313#6 CTTCTCCTTGGGCATATACGGTGCAGTGCCCGTATACA-TGTACGCGTACATACGTATAC 71
consensus_14313#0 CTTCTCCTTGGGCATATACGGTGCAGTGACCGTATACA-TGTACGCGTACATACGTATAC 582
consensus_14313#5 CCTCCTCCTCGCCGNCCTCCTCCTCGCCCTCTCCTTCT-CGCACGGGGAAGCGAAGG-AC 126
consensus_14313#3 CCTCGCGTCTGCCAGATCTGGCGGTGGGAAGGGAGGCGGCGCGCCCCAACGGCGGGACGA 273
consensus_14313#4 CCTCCCGTCTGCCAGATCTGGCGGCGGGAAGGGAGGCGGCGCGCCCCGACGGCGGGACGA 205
consensus_14313#1 TCTCATATCCATATACCTTCGACATACTCACTACTTCT-TCCATCCCAACCCTCAACTAT 271
** * *
consensus_14313#2 ATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAA------TTATT--GAAGTAG 320
consensus_14313#6 ATGTACGCGTNTACGTATGCGCGGCGTACNCACTAGCCAA------TTATT--GAAGTAG 123
consensus_14313#0 ATGTACGCGTATACGTATGCGCGGCGTACACACTAGCCAA------TTATT--GAAGTAG 634
consensus_14313#5 GTGCAGCTGGTGAAGCCGGCGCGCCGC-TACGGGCGGTGG------CGCTC--G--GCCC 175
consensus_14313#3 GAGGCAGCGACGCCCTCCCTCCGGCGGATCGGGAGGGGGG------GCATGCGGCGGCGG 327
consensus_14313#4 GAGGCAGCGACGCCCTCCCTCCGTCAGATCTGGAGGGGGG------GCATGCGGCGGCGG 259
consensus_14313#1 CTGTTTACTACTCTCTCCTTCCCCTCTCTCTTAAATACTTTTCCCCCTATATTCCATCAA 331
* * *
consensus_14313#2 ACC--TAGCTAGACTTG-TGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCG-TGT 376
consensus_14313#6 ACC--TAGNTAGANTTG-TGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCG-TGT 179
consensus_14313#0 ACC--TAGCTAGACTTG-TGCTTGACTGTCTGTCATGTGTGTGTGTGATTATTGCG-TGT 690
consensus_14313#5 TCC--AGGCCGGCGATG-GGATGG--TGTCGACGGTGGCGGACTACTCCGATCCCA-ANG 229
consensus_14313#3 TCCAGCGGCAAGAGGTGGTGGTGGCCCGACGGCGGCGCTGGTGACTGGTAGTGGTGGCGC 387
consensus_14313#4 TCCAGCGGCAGGAGGTGGTGGTGGCCCGACGGCGGCGCTGGTGACTGGTAGTGGTGGCGC 319
consensus_14313#1 TCTCCCATTATTTACAACTCACTTTCTCTCAATCTCTACCTTTCTTTTTCATATAACTAT 391
* * *
consensus_14313#2 CTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACA-TGTTTTGTTTGATTA 435
consensus_14313#6 CTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTA 239
consensus_14313#0 CTGATGTTGATCGTCGTTGATTGATTATTATGAGATTCTGAACAATGTTTTGTTTGATTA 750
consensus_14313#5 CCAACACCAANCCNGGGNGGNGGCGTGCTNNCGTGGACCGACCC-TAACTCGTCGNCGGG 288
consensus_14313#3 CCTCCCTCCGTCGGATCTGGAGGTGGTGCATGCGGCAGTGGTCC-GGCAGCAGGAGGTGG 446
consensus_14313#4 CCTCCCTCCGTCGGATCTGGAGGTGGTGCATGCGGCAGTGGTCC-GGCAGCAGGAGGTGG 378
consensus_14313#1 TCACCCCTTACTTCATCCCTTTCTACTTCTCTTCTTTACGATCAACTCCTCTATTACTCT 451
* *
consensus_14313#2 ATTTGGACGATTAATTGTTACTAGAACGTATACACGTGCGTGTGTGTAATGTTGATGTGT 495
consensus_14313#6 AAAAAAAAAAAAAAA--------------------------------------------- 254
consensus_14313#0 ATTTGGACGATTAATTGTTACTAGAACGTATACACGTGCGTGTGTGTAATGTTGATGTGT 810
consensus_14313#5 NACTGANCGNNGNNGACCAACGTNGAT--------------------------------- 315
consensus_14313#3 TGGTGACCCGGCGGCGGCAGTGGTGACCGGCAGTGGTGGCGCCCTCCTTTGATTTTTCTT 506
consensus_14313#4 TGGTGACCCGGCGGCGGCAGTGGTGACCGGCAGTGGTGGCGCCCTCCTTTGATTTTTCTT 438
consensus_14313#1 TCTCTACCCGTTCCTCTTTCCTCACTTCATCGTCATTAGTATTCTTTCTCTTACGTTCTT 511
consensus_14313#2 CCTGCATTTCGTCCCCGTTGTATCACA-CCGATCCATGTTATTTGCAATAAAATCATCA- 553
consensus_14313#6 ------------------------------------------------------------
consensus_14313#0 CTTGCATTTCGTCCCCGTTGTATCACAACCGATCCATGTAATTTGCAATAAAATCATCAA 870
consensus_14313#5 ------------------------------------------------------------
consensus_14313#3 GATTTTTGTTATTAGTGAAAGATTGAAGCTGACGCATCGAGCCATCTTTTATGTAGTTTG 566
consensus_14313#4 GATTTTTGTTATTAGTGAAAGATTGAAGCTGACGCATCGAGCCATCTTTTATGTAGTTTG 498
consensus_14313#1 CATACTTATATCT--TAATTCTCTCACCTCCTCTATTTCTATCTTCTCTTCTACTCTCTT 569
consensus_14313#2 TAATAATGTGTCATTGTTGGATGTAAAAA------------------------ 582
consensus_14313#6 -----------------------------------------------------
consensus_14313#0 TAATAATGTGTCATTGTTGGATGTAAAAAAAAAAAAAAAAAAAAAAAAACTCG 923
consensus_14313#5 -----------------------------------------------------
consensus_14313#3 TGAAT------------------------------------------------ 571
consensus_14313#4 TGAATGATTTTTGTGAAAGATTCGA---------------------------- 523
consensus_14313#1 CCATCTTCCTATCCTTATCTCTATTCACTAA---------------------- 600
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||