cluster # 1432

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Oryza sativa
cluster # 1432 cluster # 1432 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1432#0 length = 622 sequences # 2

consensusID : consensus_1432#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 622
fasta sequence

                              [CGTTAAATGTAGATATTTCATACTTAAGTATACGTTTATCTACATAGATTAACACACGACTATAATTTAAAAATA-ATTATGTATAATCAAGTACAAACAACTTGCCCCCGTCGATAAACCATGATGTCTTGGCAACACGCCACCGCCTACTGGCTACGTATGGATGTATGATGGAGCTATTTTCTTTTCCGGAATGGAGTTTGACGCAACTCAGCTATTGTGATTA-AGAAGGTTATCCAAGCAAAGCATCTGTTTTCACCTCGTATTAGCCAGATCTACTCGCATGTCCGGTAAAAGAAAAAAGAAAATGGGGGTAGGTCGCTGATCCGGCGGGCGTTAAGATGCCAAAGCTGCTAGCTGACAAATGACAAAGCAGGCACCTGTAAACTACTGTCACGATCACTGTGTATCATACTCCCACGGTCTCAAACCCTCAATTCTTCGGCGGCCATAACTGGCTACAACTGCATCTGCACACAGTAATAATTTTCCCGTTGGTTTGGGACGCACATGGAGTCACGTATTTCTCACATGACCTTGTGATGTTTTATGTATTCTATCAAGGCCATGTTTAAATTCTAACTTTTCTATCACATCGAACTTTTCTACAAATACAAACTTC]

[-] EMBL CB640043             [CGTTAAATGTAGATATTTCATACTTAAGTATACGTTTATCTACATAGATTAACACACGACTATAATTTAAAAATA ATTATGTATAATCAAGTACAAACAACTTGCCCCCGTCGATAAACCATGATGTCTTGGCAACACGCCACCGCCTACTGGCTACGTATGGATGTATGATGGAGCTATTTTCTTTTCCGGAATGGAGTTTGACGCAACTCAGCTATTGTGATTA AGAAGGTTATCCAAGCAAAGCATCTGTTTTCACCTCGTATTAGCCAGATCTACTCGCATGTCCGGTAAAAGAAAAAAGAAAATGGGGGTAGGTCGCTGATCCGGCGGGCGTTAAGATGCCAAAGCTGCTAGCTGACAAATGACAAAGCAGGCACCTGTAAAC                                                                                                                                                                                                                                          ]
[+] EMBL CB640192             [                                              cagTAACACACGACTATAATTTAAAAATATATTATGTGTAATCAAGTACAAACAACTTGCCCCCGTCGCTAAACCATGATGTCTTGGCAACACGCCACCGCCTACTGGCTACGTATGGATGTATGATGGAGCTATTTTCTTTTCCGGAATGGAGTTTGACGCAACTCAGCTATTGTGATTATTTTTTGTTATCCAAGCAAAGCATCTGTTTTCACCTCGTATTAGCCAGATCTACTCGCATGTCCGGTAAAAGAAAAAAGAAAATGGGGGTAGGTCGCTGATCCGGCGGGCGTTAAGATGCCAAAGCTGCTAGCTGACAAATGACAAAGCATGCACCTGTAAATTACTGTCACGATCACTGTGTATCATACTCCCACGGTCTCAAACCCTCAATTCTTCGGCGGCCATAACTGGCTACAACTGCATCTGCACACAGTAATAATTTTCCCGTTGGTTTGGGACGCACATGGAGTCACGTATTTCTCACATGACCTTGTGATGTTTTATGTATTCTATCAAGGCCATGTTTAAATTCTAACTTTTCTATCACATCGAACTTTTCTACAAATACAAACTTC]




>consensus_1432#0
CGTTAAATGTAGATATTTCATACTTAAGTATACGTTTATCTACATAGATTAACACACGAC
TATAATTTAAAAATAATTATGTATAATCAAGTACAAACAACTTGCCCCCGTCGATAAACC
ATGATGTCTTGGCAACACGCCACCGCCTACTGGCTACGTATGGATGTATGATGGAGCTAT
TTTCTTTTCCGGAATGGAGTTTGACGCAACTCAGCTATTGTGATTAAGAAGGTTATCCAA
GCAAAGCATCTGTTTTCACCTCGTATTAGCCAGATCTACTCGCATGTCCGGTAAAAGAAA
AAAGAAAATGGGGGTAGGTCGCTGATCCGGCGGGCGTTAAGATGCCAAAGCTGCTAGCTG
ACAAATGACAAAGCAGGCACCTGTAAACTACTGTCACGATCACTGTGTATCATACTCCCA
CGGTCTCAAACCCTCAATTCTTCGGCGGCCATAACTGGCTACAACTGCATCTGCACACAG
TAATAATTTTCCCGTTGGTTTGGGACGCACATGGAGTCACGTATTTCTCACATGACCTTG
TGATGTTTTATGTATTCTATCAAGGCCATGTTTAAATTCTAACTTTTCTATCACATCGAA
CTTTTCTACAAATACAAACTTC

clustalw multiple alignements is not computed in this case