Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14341 cluster # 14341       Sequences # 16       consensus # 6

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14341#0 length = 2065 sequences # 10  
consensus_14341#1 length = 652 sequences # 1  
consensus_14341#2 length = 474 sequences # 1  
 consensus_14341#3 length = 472 sequences # 1  
consensus_14341#4 length = 472 sequences # 2  
consensus_14341#5 length = 307 sequences # 1  
consensusID : consensus_14341#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 2065
fasta sequence 
                              [CGCCGCTGCCGCTGCCGTTGCTACGCGTCCCCCGACAACGTGCACTCCCTCTTCTCCTCTCCTCTCCAATTCGTCTCCTCCTCCTCACCACGCTTGCTTCGCCATCCCGCCTCCGCATCACCCGCCGCCGCCGCCGCCTCCTGCTCGTGGTCGCGGCTGCGTTGCCGGTGCTGCAGGAGGTGCTTCGGGGGGGAGATCTCGGTGGGGTTTGCTGCTTGCTGCTTGAGGTGGTGGCAGTTGAGGAGGAGGAGGAGGTTGCTGTGGTTGGCGAGGTGGGGTGGGGCTTGGAGTAAGCGGAGGGGGAGGAGGAGGGGGGTGGGGAGGTGGTGGTCGTCGGGCAGGTGGGGAGGATGTACGTGCCCCCGTCCCGCGGCGGCGGGGGAGGCGCGGCTGGCGGCGGCGAGCAGCCTAGGGTTTACCAAGTTTGGCGGGGAAGCAACGAGTTTTTCTTGCAAGGCCGGTTCATTTTTGGACCAGATGTGAGATCTTTGTTTCTCACTATATTCCTCATTCTTGCACCAGTATTAGTCTTCTGTATATTTGTGGCTAGACATCTGATCAATGACTTCCCTGATCACTGGGGAGTTTCAGTTATGGTCGTAGTGGTCGTCTTCACAATATATGATTTGACATTGCTGCTTCTTACCTCTGGTAGAGATCCTGGTATAGTACCACGTAATACTCACCCACCTGAGCCTGAATCGATTGATGGAGGCAGTGATATGGGAAATGGACAGACTCCACAACAACTACGTTTACCACGCACGAAGGATGTTTTCGTTAATGGAGTAATTGTGAAGGTCAAATACTGTGATACCTGCATGCTGTACCGGCCACCTCGATGCTCTCACTGTTCTATATGTAATAACTGTGTGGAGCGTTTTGATCATCACTGCCCTTGGGTTGGGCAATGCATTGGAAGGCGAAATTACCGATTCTTCTACATGTTTGTATTCTCAACCACATTGCTGTGCCTCTATGTCTTTGGCTTCTGTTGGGTGTACATTGTTAAAATAAGAGATGCTGAAAATTCAACGATATGGAAAGCAATGTTAAAGACACCGGCATCAATTGTCCTGATCATCTACTGCTTTATTTGCGTGTGGTTCGTTGGTGGTCTGTCTGTCTTTCATTTCTACCTGATGAGCACCAATCAGACAACCTATGAGAACTTTAGGTATCGGTACGATCGGCGGGCTAACCCATATAACAGAGGTATGGTGAACAACTTTCTGGAGATCTTCTGCACTGCAATTCCTCCTTCCAAGAACAATTTTCGAGCTAGGGTCCCAGTGGATCAAGGTTTACAACAAACACGCACGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACG-CTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGC-TTTTCACCTTA-GGA-TATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCTGTTCTA--GTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTTGGATTATCTATCTGTATATATCGAGTCTGTAAGCAAGGTTGTCGTGTTTGGTTTGGTTTGGTTTTCGACGTTCTGTAACTGTACCATGCTGCTCGACTCTTACTCAAGAAATACTACTACCCAAATCATCCTCTTTTTCTAAAAAAAAAA]

[+] EMBL AK121806             [CGCCGCTGCCGCTGCCGTTGCTACGCGTCCCCCGACAACGTGCACTCCCTCTTCTCCTCTCCTCTCCAATTCGTCTCCTCCTCCTCACCACGCTTGCTTCGCCATCCCGCCTCCGCATCACCCGCCGCCGCCGCCGCCTCCTGCTCGTGGTCGCGGCTGCGTTGCCGGTGCTGCAGGAGGTGCTTCGGGGGGGAGATCTCGGTGGGGTTTGCTGCTTGCTGCTTGAGGTGGTGGCAGTTGAGGAGGAGGAGGAGGTTGCTGTGGTTGGCGAGGTGGGGTGGGGCTTGGAGTAAGCGGAGGGGGAGGAGGAGGGGGGTGGGGAGGTGGTGGTCGTCGGGCAGGTGGGGAGGATGTACGTGCCCCCGTCCCGCGGCGGCGGGGGAGGCGCGGCTGGCGGCGGCGAGCAGCCTAGGGTTTACCAAGTTTGGCGGGGAAGCAACGAGTTTTTCTTGCAAGGCCGGTTCATTTTTGGACCAGATGTGAGATCTTTGTTTCTCACTATATTCCTCATTCTTGCACCAGTATTAGTCTTCTGTATATTTGTGGCTAGACATCTGATCAATGACTTCCCTGATCACTGGGGAGTTTCAGTTATGGTCGTAGTGGTCGTCTTCACAATATATGATTTGACATTGCTGCTTCTTACCTCTGGTAGAGATCCTGGTATAGTACCACGTAATACTCACCCACCTGAGCCTGAATCGATTGATGGAGGCAGTGATATGGGAAATGGACAGACTCCACAACAACTACGTTTACCACGCACGAAGGATGTTTTCGTTAATGGAGTAATTGTGAAGGTCAAATACTGTGATACCTGCATGCTGTACCGGCCACCTCGATGCTCTCACTGTTCTATATGTAATAACTGTGTGGAGCGTTTTGATCATCACTGCCCTTGGGTTGGGCAATGCATTGGAAGGCGAAATTACCGATTCTTCTACATGTTTGTATTCTCAACCACATTGCTGTGCCTCTATGTCTTTGGCTTCTGTTGGGTGTACATTGTTAAAATAAGAGATGCTGAAAATTCAACGATATGGAAAGCAATGTTAAAGACACCGGCATCAATTGTCCTGATCATCTACTGCTTTATTTGCGTGTGGTTCGTTGGTGGTCTGTCTGTCTTTCATTTCTACCTGATGAGCACCAATCAGACAACCTATGAGAACTTTAGGTATCGGTACGATCGGCGGGCTAACCCATATAACAGAGGTATGGTGAACAACTTTCTGGAGATCTTCTGCACTGCAATTCCTCCTTCCAAGAACAATTTTCGAGCTAGGGTCCCAGTGGATCAAGGTTTACAACAAACACGCACGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACG CTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGC TTTTCACCTTA GGA TATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCTGTTCTA  GTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTTGGATTATCTATCTGTATATATCGAGTCTGTAAGCAAGGTTGTCGTGTTTGGTTTGGTTTGGTTTTCGACGTTCTGTAACTGTACCATGCTGCTCGACTCTTACTCAAGAAATACTACTACCCAAATCATCCTCTT               ]
[+] EMBL CB646642             [                                                                                      ACCACGCTTGCTTCGCCATCCCGCCTCCGCATCACCCGCCGCCGCCGCCGCCTCCTGCTCGTGGTCGCGGCTGCGTTGCCGGTGCTGCAGGAGGTGCTTCGGGGGGGAGATCTCGGTGGGGTTTGCTGCTTGCTGCTTGAGGTGGTGGCAGTTGAGGAGGAGGAGGAGGTTGCTGTGGTTGGCGAGGTGGGGTGGGGCTTGGAGTAAGCGGAGGGGGAGGAGGAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB680221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTGACCTTCTACTGCTTTATTTGCGTGTGGTTCGTTGGTGGTCTGTCTGTCTTTCATTTCTACCTGATGAGCACCAATCAGACAACCTATGAGAACTTTAGGTATCGGTACGATCGGCGGGCTAACCCATATAACAGAGGTATGGTGAACAACTTTCTGGAGATCTTCTGCACTGCAATTCCTCCTTCCAAGAACAATTTTCGAGCTAGGGTCCCAGTGGATCAAGGTTTACAACAAACACGCACGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACG CTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGC TTTTCACCTTA NGA TATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCTGTTCTA  GTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTTGGgat                                                                                                                                                 ]
[-] EMBL CB680222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAGGTATCGGTACGATCGGCGGGCTAACCCATATAACAGAGGTATGGTGAACAACTTTCTGGAGATCTTCTGCACTGCAATTCCTCCTTCCAAGAACAATTTTCGAGCTAGGGTCCCAGTGGATCAAGGTTTACAACAAACACGCACGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACG CTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGC TTTTCACCTTA GGA TATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCTGTTCTA  GTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTGGGATTATCTATCTGTATATATCGAGTCTGTAAG                                                                                                                     ]
[-] EMBL CB669762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGAACAACTTTCTGGAGATCTTCTGCACTGCAATTCCTCCTTCCAAGAACAA TTTCGAGCTAGGGTCCCAGTGGATCAAGGTTTACAACAAACACGCACGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACG CTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGC TTTTCACCTTA GGA TATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCTGTTCTA  GTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTTGGATTATCTATCTGTATATATCGAGTCTGTAAGCAAGGTTGTCGTGTTTGGTTTGGTTTGGTTTTCGACGTTCTGTAACTGTACCATGCTGCTCGACTCTTACTCAAGAAATACTACTcc                              ]
[+] EMBL BP184741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTCCTCCTTCCAAGAACAATTTTCGAGCTAGGGTCCCAGTGGATCAAGGTTTACAACAAACACGCACGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACG CTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGC TTTTCACCTTA GGA TATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCT                                                                                                                                                                                                                                           ]
[-] EMBL CB646643             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TGGATCAAGGTTTACAACAAACACGCACGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACG CTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGC TTTTCACCTTA GGA TATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCTGTTCTA  GTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTTGGATTATCTATCTGTATATATCGAGTCTGTAAGCAAGGTTGTCGTGTTTGGTTTGGTTTGGTTTTCGACGTTCTGTAACTGTACCATGCTGCTCGACTCTTACTCAAGAAATA                                     ]
[+] EMBL OSC30811             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gtcnAGCAGATATCAGAGATTTGGAAGTTGGCCTNTGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCNCAGATCTTTCTCNTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCNAGACGATCAAGTTGGGGTCACAGAAGCNGAACCTCAGAGTCGANGGACAGCATCGCTGTGCAAATNGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGC                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF195752             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACG CTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGC TTTTCACCTTA GGA TATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCTGTTCTAGTGTGTCTTTAAGCAAAAATNACAGNNNNTCTTTAACTCAATGCGTGGCTTGGATTATCTATCTNNNTATATCGAGTNTNTNNNNNNNNNTGTCGNNTTTGGTTTGGTTTGGTnnnnnnnn                                                                                ]
[+] EMBL BI812563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gcGCCAT GTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACGCCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTTCACCTTAGGGATTATATACACAGTGCTTTCTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCTGTTCTAGTGTGTCTTTAAGCCAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTTGGATTATCTATCTGTATATATCGAGTCTGTAAGCAAGGTTGTCGTGTTTGGTTTGGTTTGGTTTTCGACGTTCTGTAACTGTACCATGCTGCTCGACTCTTACTCAAGAAATACTACTACCCAAATCATCCTCTTTTTCTAAAAAAAAAA]




>consensus_14341#0
CGCCGCTGCCGCTGCCGTTGCTACGCGTCCCCCGACAACGTGCACTCCCTCTTCTCCTCT
CCTCTCCAATTCGTCTCCTCCTCCTCACCACGCTTGCTTCGCCATCCCGCCTCCGCATCA
CCCGCCGCCGCCGCCGCCTCCTGCTCGTGGTCGCGGCTGCGTTGCCGGTGCTGCAGGAGG
TGCTTCGGGGGGGAGATCTCGGTGGGGTTTGCTGCTTGCTGCTTGAGGTGGTGGCAGTTG
AGGAGGAGGAGGAGGTTGCTGTGGTTGGCGAGGTGGGGTGGGGCTTGGAGTAAGCGGAGG
GGGAGGAGGAGGGGGGTGGGGAGGTGGTGGTCGTCGGGCAGGTGGGGAGGATGTACGTGC
CCCCGTCCCGCGGCGGCGGGGGAGGCGCGGCTGGCGGCGGCGAGCAGCCTAGGGTTTACC
AAGTTTGGCGGGGAAGCAACGAGTTTTTCTTGCAAGGCCGGTTCATTTTTGGACCAGATG
TGAGATCTTTGTTTCTCACTATATTCCTCATTCTTGCACCAGTATTAGTCTTCTGTATAT
TTGTGGCTAGACATCTGATCAATGACTTCCCTGATCACTGGGGAGTTTCAGTTATGGTCG
TAGTGGTCGTCTTCACAATATATGATTTGACATTGCTGCTTCTTACCTCTGGTAGAGATC
CTGGTATAGTACCACGTAATACTCACCCACCTGAGCCTGAATCGATTGATGGAGGCAGTG
ATATGGGAAATGGACAGACTCCACAACAACTACGTTTACCACGCACGAAGGATGTTTTCG
TTAATGGAGTAATTGTGAAGGTCAAATACTGTGATACCTGCATGCTGTACCGGCCACCTC
GATGCTCTCACTGTTCTATATGTAATAACTGTGTGGAGCGTTTTGATCATCACTGCCCTT
GGGTTGGGCAATGCATTGGAAGGCGAAATTACCGATTCTTCTACATGTTTGTATTCTCAA
CCACATTGCTGTGCCTCTATGTCTTTGGCTTCTGTTGGGTGTACATTGTTAAAATAAGAG
ATGCTGAAAATTCAACGATATGGAAAGCAATGTTAAAGACACCGGCATCAATTGTCCTGA
TCATCTACTGCTTTATTTGCGTGTGGTTCGTTGGTGGTCTGTCTGTCTTTCATTTCTACC
TGATGAGCACCAATCAGACAACCTATGAGAACTTTAGGTATCGGTACGATCGGCGGGCTA
ACCCATATAACAGAGGTATGGTGAACAACTTTCTGGAGATCTTCTGCACTGCAATTCCTC
CTTCCAAGAACAATTTTCGAGCTAGGGTCCCAGTGGATCAAGGTTTACAACAAACACGCA
CGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGG
GTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAG
TTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATC
TTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTT
GGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCG
AAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACA
CATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAAC
CATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTCACCTTAGGATATATACACAGTGCTTT
CTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCT
GTTCTAGTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTTGGATT
ATCTATCTGTATATATCGAGTCTGTAAGCAAGGTTGTCGTGTTTGGTTTGGTTTGGTTTT
CGACGTTCTGTAACTGTACCATGCTGCTCGACTCTTACTCAAGAAATACTACTACCCAAA
TCATCCTCTTTTTCTAAAAAAAAAA

consensusID : consensus_14341#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 652
fasta sequence 
                              [TGAGCCGGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCGGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTTTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGAGGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGTTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAATTCACTAGCACACATCAGTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTTTTTTTTCCTGTGCTGCTTTTCACGTTAGGATATATACACAGTGCTTTCTTCCTCCGGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATTTATTGATGCACATCCTGTTTTAGTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGGGTGGCTTGGATTATCTATCGGTATATATGGAGTCGTAAGCAAGGTTGTCGTGTTTGGTCCTCCCCACCCCCCTCCTCCTCCC]

[-] EMBL CB669761             [TGAGCCGGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCGGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTTTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGAGGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGTTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAATTCACTAGCACACATCAGTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTTTTTTTTCCTGTGCTGCTTTTCACGTTAGGATATATACACAGTGCTTTCTTCCTCCGGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATTTATTGATGCACATCCTGTTTTAGTGTCTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGGGTGGCTTGGATTATCTATCGGTATATATGGAGTCGTAAGCAAGGTTGTCGTGTTTGGTCCTCCCCACCCCCCTCCTCCTCCC]




>consensus_14341#1
TGAGCCGGAACATGGGTAAACCAGTTGGAGATCTTGAATTGGGTAGGAAACCGGTATCAT
GGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAGTTGGCCTTGGGGGTCTTT
TGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTTTCTTCCGGGTGAGC
TTGTGGAAGGTAGGGCTGGTATGCATTCGAGAGGATCAAGTTGGGGTCACAGAAGCGGAA
CCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGTTAACTGGGGTTCAA
TCAGCAGCGGCCATGGTACCACCAGTTCAATTCACTAGCACACATCAGTGCATTTCTGAC
GCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTTTTTTT
TCCTGTGCTGCTTTTCACGTTAGGATATATACACAGTGCTTTCTTCCTCCGGTCCTCTGT
TGTTGTTCCATCCTGGAATGGGCATTTATTGATGCACATCCTGTTTTAGTGTCTTTAAGC
AAAAATAACAGAAGATCTTTAACTCAATGGGTGGCTTGGATTATCTATCGGTATATATGG
AGTCGTAAGCAAGGTTGTCGTGTTTGGTCCTCCCCACCCCCCTCCTCCTCCC

consensusID : consensus_14341#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 474
fasta sequence 
                              [TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCNGNNNNACTCACTAGCACACATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCNATCTCATGAATGANNNACCATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNACCNNNNNATATATACACAGTGCTTTCTTCCTCCCGTCCTCTNNNNNNGTTCCNNCCTNNNATGGGCATCTATTGATGCACATCCTGTTCTAGTGTGTCTTTAAGCAAAAATAACAGNNNATCTTTAACTCNNTGCGTNGCTTGGATTATCTATC]

[+] EMBL CF195813             [TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCNGNNNNACTCACTAGCACACATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCNATCTCATGAATGANNNACCATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNACCNNNNNATATATACACAGTGCTTTCTTCCTCCCGTCCTCTNNNNNNGTTCCNNCCTNNNATGGGCATCTATTGATGCACATCCTGTTCTAGTGTGTCTTTAAGCAAAAATAACAGNNNATCTTTAACTCNNTGCGTNGCTTGGATTATCTATC]




>consensus_14341#2
TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTG
AGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCG
GAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTT
CAATCAGCAGCGGCCATGGTACCACCNGNNNNACTCACTAGCACACATCACTGCATTTCT
GACGCTGCATCTGCATCTATTGGATCNATCTCATGAATGANNNACCATGTGTGTACTCTC
TTCTCCTGTGCTGCTTTTNACCNNNNNATATATACACAGTGCTTTCTTCCTCCCGTCCTC
TNNNNNNGTTCCNNCCTNNNATGGGCATCTATTGATGCACATCCTGTTCTAGTGTGTCTT
TAAGCAAAAATAACAGNNNATCTTTAACTCNNTGCGTNGCTTGGATTATCTATC

consensusID : consensus_14341#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 472
fasta sequence 
                              [TTTTGGATGNGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAANNACCATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNNNNNTNNNATATATACACAGTGCTTTCTTCCTCCCGTCCTNNNTTGTTGTTCCATCCTGGAATGGGCATCNATTGATGCACATCCTGTTCTANNNTGTCTTNNNNNAAAAATAACAGAAGNTNTTTAACTCNNNNNGTNNNTNNNATTATNNN]

[+] EMBL CF195790             [TTTTGGATGNGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAANNACCATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNNNNNTNNNATATATACACAGTGCTTTCTTCCTCCCGTCCTNNNTTGTTGTTCCATCCTGGAATGGGCATCNATTGATGCACATCCTGTTCTANNNTGTCTTNNNNNAAAAATAACAGAAGNTNTTTAACTCNNNNNGTNNNTNNNATTATNNN]




>consensus_14341#3
TTTTGGATGNGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTG
AGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCG
GAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTT
CAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCT
GACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAANNACCATGTGTGTACTCTC
TTCTCCTGTGCTGCTTTTNNNNNTNNNATATATACACAGTGCTTTCTTCCTCCCGTCCTN
NNTTGTTGTTCCATCCTGGAATGGGCATCNATTGATGCACATCCTGTTCTANNNTGTCTT
NNNNNAAAAATAACAGAAGNTNTTTAACTCNNNNNGTNNNTNNNATTATNNN

consensusID : consensus_14341#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 472
fasta sequence 
                              [TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNACCTTAGGATATATACACAGTGCTTTCTTCCTCCNNNCCTCTGTTGTTGNNNNNNNNNNNNATGGGCATCTATTGANGNNNATCCTGTTCTAGTGTGTCTTTAANNNNNNNTAACAGANNNTCTTTAANTNAATGCNTNNNNNNNNNNATCTA]

[+] EMBL CF195817             [TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNACCTTAGGATATATACACAGTGCTTTCTTCCTCCNNNCCTCTGTTGTTGNNNNNNNNNNNNATGGGCATCTATTGANGNNNATCCTGTTCTAGTGTGTCTTTAANNNNNNNTAACAGANNNTCTTTAANTNAATGCNTNNNNNNNNNNATCTA]
[+] EMBL CF195866             [TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTAC                                                                                                                                                                                                                                                                              ]




>consensus_14341#4
TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTG
AGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTTGGGGTCACAGAAGCG
GAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCGAAGCTAACTGGGGTT
CAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACACATCACTGCATTTCT
GACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAACCATGTGTGTACTCTC
TTCTCCTGTGCTGCTTTTNACCTTAGGATATATACACAGTGCTTTCTTCCTCCNNNCCTC
TGTTGTTGNNNNNNNNNNNNATGGGCATCTATTGANGNNNATCCTGTTCTAGTGTGTCTT
TAANNNNNNNTAACAGANNNTCTTTAANTNAATGCNTNNNNNNNNNNATCTA

consensusID : consensus_14341#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 307
fasta sequence 
                              [TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCANTNNNGACGATCAAGTTGGGGTNNNNNANNCGGAACNTNAGANNNGATGGACAGCATCGCTGTGCAAATGGGAACCGNNNNTNNNNGGGGTTCAATCAGCAGCGNCNATGGTANNNNCNNNNNAACTNNNTNGNNNACATNNNTGCATTTCTGACGCTGCNNCNNNNNNTATTNNNNNNNNNTNATGANNNNNNNNNCNTNNNTGTNNNNNTCTTNNNN]

[+] EMBL CF195850             [TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCANTNNNGACGATCAAGTTGGGGTNNNNNANNCGGAACNTNAGANNNGATGGACAGCATCGCTGTGCAAATGGGAACCGNNNNTNNNNGGGGTTCAATCAGCAGCGNCNATGGTANNNNCNNNNNAACTNNNTNGNNNACATNNNTGCATTTCTGACGCTGCNNCNNNNNNTATTNNNNNNNNNTNATGANNNNNNNNNCNTNNNTGTNNNNNTCTTNNNN]




>consensus_14341#5
TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATCTTTCTCTTCCGGGTG
AGCTTGTGGAAGGTAGGGCTGGTATGCANTNNNGACGATCAAGTTGGGGTNNNNNANNCG
GAACNTNAGANNNGATGGACAGCATCGCTGTGCAAATGGGAACCGNNNNTNNNNGGGGTT
CAATCAGCAGCGNCNATGGTANNNNCNNNNNAACTNNNTNGNNNACATNNNTGCATTTCT
GACGCTGCNNCNNNNNNTATTNNNNNNNNNTNATGANNNNNNNNNCNTNNNTGTNNNNNT
CTTNNNN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14341#0      CGCCGCTGCCGCTGCCGTTGCTACGCGTCCCCCGACAACGTGCACTCCCTCTTCTCCTCT 60
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      CCTCTCCAATTCGTCTCCTCCTCCTCACCACGCTTGCTTCGCCATCCCGCCTCCGCATCA 120
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      CCCGCCGCCGCCGCCGCCTCCTGCTCGTGGTCGCGGCTGCGTTGCCGGTGCTGCAGGAGG 180
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TGCTTCGGGGGGGAGATCTCGGTGGGGTTTGCTGCTTGCTGCTTGAGGTGGTGGCAGTTG 240
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      AGGAGGAGGAGGAGGTTGCTGTGGTTGGCGAGGTGGGGTGGGGCTTGGAGTAAGCGGAGG 300
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      GGGAGGAGGAGGGGGGTGGGGAGGTGGTGGTCGTCGGGCAGGTGGGGAGGATGTACGTGC 360
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      CCCCGTCCCGCGGCGGCGGGGGAGGCGCGGCTGGCGGCGGCGAGCAGCCTAGGGTTTACC 420
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      AAGTTTGGCGGGGAAGCAACGAGTTTTTCTTGCAAGGCCGGTTCATTTTTGGACCAGATG 480
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TGAGATCTTTGTTTCTCACTATATTCCTCATTCTTGCACCAGTATTAGTCTTCTGTATAT 540
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TTGTGGCTAGACATCTGATCAATGACTTCCCTGATCACTGGGGAGTTTCAGTTATGGTCG 600
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TAGTGGTCGTCTTCACAATATATGATTTGACATTGCTGCTTCTTACCTCTGGTAGAGATC 660
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      CTGGTATAGTACCACGTAATACTCACCCACCTGAGCCTGAATCGATTGATGGAGGCAGTG 720
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      ATATGGGAAATGGACAGACTCCACAACAACTACGTTTACCACGCACGAAGGATGTTTTCG 780
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TTAATGGAGTAATTGTGAAGGTCAAATACTGTGATACCTGCATGCTGTACCGGCCACCTC 840
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      GATGCTCTCACTGTTCTATATGTAATAACTGTGTGGAGCGTTTTGATCATCACTGCCCTT 900
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      GGGTTGGGCAATGCATTGGAAGGCGAAATTACCGATTCTTCTACATGTTTGTATTCTCAA 960
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      CCACATTGCTGTGCCTCTATGTCTTTGGCTTCTGTTGGGTGTACATTGTTAAAATAAGAG 1020
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      ATGCTGAAAATTCAACGATATGGAAAGCAATGTTAAAGACACCGGCATCAATTGTCCTGA 1080
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TCATCTACTGCTTTATTTGCGTGTGGTTCGTTGGTGGTCTGTCTGTCTTTCATTTCTACC 1140
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TGATGAGCACCAATCAGACAACCTATGAGAACTTTAGGTATCGGTACGATCGGCGGGCTA 1200
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      ACCCATATAACAGAGGTATGGTGAACAACTTTCTGGAGATCTTCTGCACTGCAATTCCTC 1260
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      CTTCCAAGAACAATTTTCGAGCTAGGGTCCCAGTGGATCAAGGTTTACAACAAACACGCA 1320
consensus_14341#1      ------------------------------------------------------------
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      CGCCTGCTAGGGGTTTCATGAGCCCGAACATGGGTAAACCAGTTGGAGATCTTGAATTGG 1380
consensus_14341#1      ------------------TGAGCCGGAACATGGGTAAACCAGTTGGAGATCTTGAATTGG 42
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      GTAGGAAACCCGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAG 1440
consensus_14341#1      GTAGGAAACCGGTATCATGGGATGAGCCTCGGTCAGCAGCAGATATCAGAGATTTGGAAG 102
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATC 1500
consensus_14341#1      TTGGCCTTGGGGGTCTTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATC 162
consensus_14341#3      ---------------TTTTGGATGNGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATC 45
consensus_14341#2      ---------------TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATC 45
consensus_14341#4      ---------------TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATC 45
consensus_14341#5      ---------------TTTTGGATGAGAAAGAGGGTAGAATAGCCCATGCATCCCCAGATC 45
                                      ********* ***********************************

consensus_14341#0      TTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTT 1560
consensus_14341#1      TTTTTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGAGGATCAAGTT 222
consensus_14341#3      TTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTT 105
consensus_14341#2      TTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTT 105
consensus_14341#4      TTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCATTCGAGACGATCAAGTT 105
consensus_14341#5      TTTCTCTTCCGGGTGAGCTTGTGGAAGGTAGGGCTGGTATGCANTNNNGACGATCAAGTT 105
                       *** *************************************** *   ** *********

consensus_14341#0      GGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCG 1620
consensus_14341#1      GGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCG 282
consensus_14341#3      GGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCG 165
consensus_14341#2      GGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCG 165
consensus_14341#4      GGGGTCACAGAAGCGGAACCTCAGAGTCGATGGACAGCATCGCTGTGCAAATGGGAACCG 165
consensus_14341#5      GGGGTNNNNNANNCGGAACNTNAGANNNGATGGACAGCATCGCTGTGCAAATGGGAACCG 165
                       *****     *  ****** * ***   ********************************

consensus_14341#0      AAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACA 1680
consensus_14341#1      AAGTTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAATTCACTAGCACA 342
consensus_14341#3      AAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACA 225
consensus_14341#2      AAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCNGNNNNACTCACTAGCACA 225
consensus_14341#4      AAGCTAACTGGGGTTCAATCAGCAGCGGCCATGGTACCACCAGTTCAACTCACTAGCACA 225
consensus_14341#5      NNNNTNNNNGGGGTTCAATCAGCAGCGNCNATGGTANNNNCNNNNNAACTNNNTNGNNNA 225
                           *    ****************** * ******    *      * *   * *   *

consensus_14341#0      CATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAAC 1740
consensus_14341#1      CATCAGTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAAC 402
consensus_14341#3      CATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAANNAC 285
consensus_14341#2      CATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCNATCTCATGAATGANNNAC 285
consensus_14341#4      CATCACTGCATTTCTGACGCTGCATCTGCATCTATTGGATCCATCTCATGAATGAAGAAC 285
consensus_14341#5      CATNNNTGCATTTCTGACGCTGCNNCNNNNNNTATTNNNNNNNNNTNATGANNNNNNNNN 285
                       ***   *****************  *      ****         * ****         

consensus_14341#0      CATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTCACCTTAGGATATATACACAGTGCTTT 1800
consensus_14341#1      CATGTGTGTACTTTTTTTTCCTGTGCTGCTTTTCACGTTAGGATATATACACAGTGCTTT 462
consensus_14341#3      CATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNNNNNTNNNATATATACACAGTGCTTT 345
consensus_14341#2      CATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNACCNNNNNATATATACACAGTGCTTT 345
consensus_14341#4      CATGTGTGTACTCTCTTCTCCTGTGCTGCTTTTNACCTTAGGATATATACACAGTGCTTT 345
consensus_14341#5      CNTNNNTGTNNNNNTCTTNNNN-------------------------------------- 307
                       * *   ***       *                                           

consensus_14341#0      CTTCCTCCCGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATCTATTGATGCACATCCT 1860
consensus_14341#1      CTTCCTCCGGTCCTCTGTTGTTGTTCCATCCTGGAATGGGCATTTATTGATGCACATCCT 522
consensus_14341#3      CTTCCTCCCGTCCTNNNTTGTTGTTCCATCCTGGAATGGGCATCNATTGATGCACATCCT 405
consensus_14341#2      CTTCCTCCCGTCCTCTNNNNNNGTTCCNNCCTNNNATGGGCATCTATTGATGCACATCCT 405
consensus_14341#4      CTTCCTCCNNNCCTCTGTTGTTGNNNNNNNNNNNNATGGGCATCTATTGANGNNNATCCT 405
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      GTTCTAGTGT--CTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGCGTGGCTTGGA 1918
consensus_14341#1      GTTTTAGTGT--CTTTAAGCAAAAATAACAGAAGATCTTTAACTCAATGGGTGGCTTGGA 580
consensus_14341#3      GTTCTANNNTGTCTTNNNNNAAAAATAACAGAAGNTNTTTAACTCNNNNNGTNNNTNNNA 465
consensus_14341#2      GTTCTAGTGTGTCTTTAAGCAAAAATAACAGNNNATCTTTAACTCNNTGCGTNGCTTGGA 465
consensus_14341#4      GTTCTAGTGTGTCTTTAANNNNNNNTAACAGANNNTCTTTAANTNAATGCNTNNNNNNNN 465
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TTATCTATCTGTATATATCGAGTCTGTAAGCAAGGTTGTCGTGTTTGGTTTGGTTTGGTT 1978
consensus_14341#1      TTATCTATCGGTATATATGGAGTC-GTAAGCAAGGTTGTCGTGTTTGGTCCTCCCCACCC 639
consensus_14341#3      TTATNNN----------------------------------------------------- 472
consensus_14341#2      TTATCTATC--------------------------------------------------- 474
consensus_14341#4      NNATCTA----------------------------------------------------- 472
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      TTCGACGTTCTGTAACTGTACCATGCTGCTCGACTCTTACTCAAGAAATACTACTACCCA 2038
consensus_14341#1      CCCTCCTCCTCCC----------------------------------------------- 652
consensus_14341#3      ------------------------------------------------------------
consensus_14341#2      ------------------------------------------------------------
consensus_14341#4      ------------------------------------------------------------
consensus_14341#5      ------------------------------------------------------------
                                                                                   

consensus_14341#0      AATCATCCTCTTTTTCTAAAAAAAAAA 2065
consensus_14341#1      ---------------------------
consensus_14341#3      ---------------------------
consensus_14341#2      ---------------------------
consensus_14341#4      ---------------------------
consensus_14341#5      ---------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)