cluster # 14349

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Oryza sativa
cluster # 14349 cluster # 14349 Sequences # 16 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14349#0 length = 1070 sequences # 13

consensus_14349#1 length = 483 sequences # 2
consensus_14349#2 length = 363 sequences # 1

consensusID : consensus_14349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1070
fasta sequence

                              [CAAAGCGAGAAATTCCACACAGGTTACACCAGTATATACGCATCTTGCTAAACCGACTACTGATCGAGATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGACTACGGGAATTGGGCTTCAACGTGATTGTTTCGTTCTTTTTGGCGATAGCCATAAACGTTGGTCTAAGCTACCCAACTCTG-CCAAGCTGGATACCATCTCTCCTGTTCCCTATACACAT-AAAAAACATCCACAGGGCTAAGCACGGCAGCGATAGCTCGACGTACGACAACGAGGGAAGGTTTATGCCGGTCAATTTCGAGAGCATCTTCAGCAAGAACGCCCGCACGGCGCCGGACAAGCTCACGTTCGGCGATATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCGCGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAATGTGTCTGTAACCTGAAAGTGTGATTGACATATAAAATTCTGTGATTGAAGTAAAGGTAAGCAT-TACTAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL OSEF127GN            [CAAAGCGAGAAATTCCACACAGGTTACACCAGTATATACGCATCTTGCTAAACCGACTACTGATCGAGATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGACTACGGGAATTGGGCTTCAACGTGATTGTTTCGTTCTTTTTGGCGATAGCCATAAACGTTGGTCTAAGCTACCCAACTCTG CCAAGCTGGATACCATCTCTCCTGTTCCCTATACACAT AAAAAACATCCACAGGGCTAAGCACGGCAGCGATAGCTCGACGTACGACAACGAGGGAAGGTTTATGCCGGTCAATTTCGAGAGCATCTTCAGCAAGAACGCCCGCACGGCGCCGGACAAGCTCACGTTCGGCGATATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCGCGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAATGTGTCTGTAACCTGAAAGTGTGATTGACATATAAAATTCTGTGATTGAAGTAAAGGTAAGCAT TA  AAAAAA                    ]
[+] EMBL AU085888             [               CACACAGGTTACACCAGTATATACGCATCTTGCTAAACCGACTACTGATCGAGATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGACTACGGGAATTGGGCTTCAACGTGATTGTTTCGTTCTTTTTGGCGATA CATTAAACGTNGGTCTAAGCTAnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AA751690             [                    AGGTTACACCAGTATATACGCATCTTGCTAAACCGACTACTGATCGANATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACAAAAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCANATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTNCCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCCGCATGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGACTACNGGAATTGGGCTTCAACGTGATTGTTTCGTTCTTTTTGGCGATAGCCATAAACGTTGGTCTAAGCTACCCAACTCTG CCAAGCTGGATACCATCTCTCCTGTTCCCTATACACAT AAAAAACATCCACAGGGCTAAGCACGGCAGCGATAGCTCGACGTNCGACAACNAAGGAAGGTTTATGCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CA754222             [                    AGGTTACACCAGTATATACGCATCTTGCTAAACCGACTACTGATCGAGATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSC568               [                       TTACACCAGTATATACGCATCTTGCTAAACCGACTACTGATCGAGATCGCTATGGCGGAGGAGGCGGCTAG AAGGCAGCG CANCCGATGCGCTGTCGTCCGTGGCGGCGGAGGCG  GNTGACGAGAGAACNGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF303427             [                       TTACACCAGTATATACGCATCTTGCTAAACCGACTACTGATCGAGATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGACTACGGGAATTGGGCTTCAACGTGATTGTTTCGTTCTTTTTGGCGATAGCCATAAACGTTGGTCTAAGCTACCCAACTCTG CCAAGCTGGATACCATCTCTCCTGTTCCCTATACACAT AAAAAACATCCACAGGGCTAAGCACGGCAGCGATAGCTCGACGTACGACAACGAGGGAAGGTTTATGCCGGTCAATTTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU085889             [                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGCCCAAGCTGGATACNATCTCTCCTGTTCCCTATACNCATAAAAAAACATCCACAGGGCTAAGCACGGCAGCGATAGCTCGACGTACGACAACGAGGGAAGGTTTATGCCGGTCAATTTCGAGAGCATCTTCAGCAAGAACGCCCGCACGGCGCCGGACAAGCTCACGTTCGGCGATATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCGCGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAATGTGTCTGTAACCTGAAAGTGTGATTGACATATAAAATTCTGTGATTGAAGTAAAGGTAAGCAT TACTAAAAA                     ]
[+] EMBL C99298               [                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCTCTCCTGTCCCTTATACACNT AAAAACCATCCACAGGNNTAAGCACGGCAGCGATAGCTCGACTTACGACAACGAGGAAAGTTTTATGCCGGTCAATTTCGAGAGCATCTTCAGCAAGAACGCCCGCACGGCGCCGGACAAGCTCACGTTCGGCGATATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCGCGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAAaa                                                                                             ]
[+] EMBL CF312038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCGCGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAATGTGTCTGTAAaaaa                                                                                ]
[-] EMBL CF312039             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCGCGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAATGTGTCTGTAAaaaaa                                                                               ]
[+] EMBL AU165046             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAATGTGTCTGTAACCTGAAAGTGTGATTGACATATAAAATTCTGTGATTGAAGTAAAaa                                      ]
[+] EMBL AU089659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCCCAACAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTAGGAACATACATTATGTACTATCCATGTGATTATTGAAATGTGTCTGTGACCGGAAAGCGTGATTGACATATAAACTTCTGTGATTGAAATAAAGGTAAGCATGTCCCAAAA                      ]
[-] EMBL CF318099             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATTATGTACTATCCATGTGATTATTGAAATGTGTCTGTAACCTGAAAGTGTGATTGACATATAAAATTCTGTGATTGAAGTAAAGGTAAGCAT TATTAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_14349#0
CAAAGCGAGAAATTCCACACAGGTTACACCAGTATATACGCATCTTGCTAAACCGACTAC
TGATCGAGATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGT
CGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAG
TGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTG
AAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCT
TCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGACTACGGGAAT
TGGGCTTCAACGTGATTGTTTCGTTCTTTTTGGCGATAGCCATAAACGTTGGTCTAAGCT
ACCCAACTCTGCCAAGCTGGATACCATCTCTCCTGTTCCCTATACACATAAAAAACATCC
ACAGGGCTAAGCACGGCAGCGATAGCTCGACGTACGACAACGAGGGAAGGTTTATGCCGG
TCAATTTCGAGAGCATCTTCAGCAAGAACGCCCGCACGGCGCCGGACAAGCTCACGTTCG
GCGATATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCG
CGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCA
GGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGA
GAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGA
TGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTG
TCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATC
CATGTGATTATTGAAATGTGTCTGTAACCTGAAAGTGTGATTGACATATAAAATTCTGTG
ATTGAAGTAAAGGTAAGCATTACTAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_14349#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 483
fasta sequence

                              [AGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTGTGAGTATCTGTTTGCCTCGATGAGATCGGTTACAGCTTTAGTTTTGTCTGTCGATCTAGTTCTAGTTCTGAATTCGGCTGAACAACGATTCTGATCGCAGATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGTACATACTACAAAACATATAGCTCCATTGTTGCTGCGGAAAAAAAAATTAAACGGCTATTATTGTTCAGCCGAATAAAATATTTGTATATATCGGGAAGATCATTCAGCCCGATAGAATCATATTCTACAGTA]

[+] EMBL CF303036             [AGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTGTGAGTATCTGTTTGCCTCGATGAGATCGGTTACAGCTTTAGTTTTGTCTGTCGATCTAGTTCTAGTTCTGAATTCGGCTGAACAACGATTCTGATCGCAGATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGTACATACTACAAAACATATAGCTCCATTGTTGCTGCGGAAAAAAAAATTAAACGGCTATTATTGTTCAGCCGAATAAAATATTTGTATATATCGGGAAGATCATTCAGCCCGATAGAATCATATTCTACAGTA]
[+] EMBL CF304930             [AGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTGTGAGTATCTGTTTGCCTCGATGAGATCGGTTACAGCTTTAGTTTTGTCTGTCGATCTAGTTCTAGTTCTGAATTCGGCTGAACAACGATTCTGATCGCAGATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGTACATACTACAt                                                                                                                         ]




>consensus_14349#1
AGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCC
GGTCCGAGCGGACTTGGAAGTGCAGATTCCGAAGCCCTGTGAGTATCTGTTTGCCTCGAT
GAGATCGGTTACAGCTTTAGTTTTGTCTGTCGATCTAGTTCTAGTTCTGAATTCGGCTGA
ACAACGATTCTGATCGCAGATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCT
GAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTC
TTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGTACATACTAC
AAAACATATAGCTCCATTGTTGCTGCGGAAAAAAAAATTAAACGGCTATTATTGTTCAGC
CGAATAAAATATTTGTATATATCGGGAAGATCATTCAGCCCGATAGAATCATATTCTACA
GTA

consensusID : consensus_14349#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 363
fasta sequence

                              [GAGGAGTAGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAACACTGTGATGCCG]

[+] EMBL CF322150             [GAGGAGTAGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAGGCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTGAAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGATTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAACACTGTGATGCCG]




>consensus_14349#2
GAGGAGTAGATATTGCTCTACGTGCTTGCGAAAGATGAGGAAGGATTCCTCAGGAAGGAG
GCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGCAGAGAAGGGAG
GCACATGAGAAGCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCTGGGATGTGCTTG
ATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATAGCCACATCATGTTTGTCCATCTG
AAAAAACAATGGAAATAAGGTTTACCGGTTGGAACATACATTATGTACTATCCATGTGAT
TATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAACACTGTGATG
CCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14349#0      CAAAGCGAGAAATTCCACACAGGTTACACCAGTATATACGCATCTTGCTAAACCGACTAC 60
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      TGATCGAGATCGCTATGGCGGAGGAGGCGGCTAGCAAGGCAGCGCCGACCGATGCGCTGT 120
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      CGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGAACGGCCGGTCCGAGCGGACTTGGAAG 180
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      TGCAGATTCCGAAGCCCTATTTGGCCCGAGCTCTGGTTGCTCCGGACGTGTACCATCCTG 240
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      AAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCATGTGGCTTTCT 300
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      TCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGGACTACGGGAAT 360
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      TGGGCTTCAACGTGATTGTTTCGTTCTTTTTGGCGATAGCCATAAACGTTGGTCTAAGCT 420
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      ACCCAACTCTGCCAAGCTGGATACCATCTCTCCTGTTCCCTATACACATAAAAAACATCC 480
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      ACAGGGCTAAGCACGGCAGCGATAGCTCGACGTACGACAACGAGGGAAGGTTTATGCCGG 540
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      TCAATTTCGAGAGCATCTTCAGCAAGAACGCCCGCACGGCGCCGGACAAGCTCACGTTCG 600
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------------------------------------------------------------
                                                                                   

consensus_14349#0      GCGATATCTGGCGGATGACCGAAGGCCAAAGGGTGGCGCTCGACTTGCTTGGGAGGATCG 660
consensus_14349#2      ------------------------------------------------------------
consensus_14349#1      ------AGCGCCGACCGATGCGCTGTCGTCCGTGGCGGCGGAGGCGCCGGTGACGAGAGA 54
                                                                                   

consensus_14349#0      CGAGTAAGGGGGAGTGGATATTGCTCTACGTGCTTGCGAAAG---ATGAGGAAGGATTCC 717
consensus_14349#2      --------GAGGAGTAGATATTGCTCTACGTGCTTGCGAAAG---ATGAGGAAGGATTCC 49
consensus_14349#1      ACGGCCGGTCCGAGCGGACTTGGAAGTGCA-GATTCCGAAGCCCTGTGAGTATCTGTTTG 113
                                  ***  **  * *   * *  * ** ****      **** *    **  

consensus_14349#0      TCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGC 777
consensus_14349#2      TCAGGAAGGAGGCTGTTCGCCGCTGCTTCGATGGGAGCCTATTCGAGTCGATTGCCCAGC 109
consensus_14349#1      CCTCGATG-AGATCGGTTACAGCTTTAGTTTTGTCTGTCGATCTAGTTCTAGTTCTGAAT 172
                        *  ** * **   * *  * ***       **   * * **     ** * * *  *  

consensus_14349#0      AGAGAAGGGAGGCACATGAGAA-GCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCT 836
consensus_14349#2      AGAGAAGGGAGGCACATGAGAA-GCAGAAGTAGCCTCCTAATTTCATCGTCCCGGGACCT 168
consensus_14349#1      TCGGCTGAACAACGATTCTGATCGCAGATTTGGC--CCGAGCTCTGGTTGCTCCGGACGT 230
                          *  *     *   *  **  *****  * **  ** *  *       * * **** *

consensus_14349#0      GGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATA--GCCACATCA 894
consensus_14349#2      GGGATGTGCTTGATTGCTTGTGTGTGTTGTTGTGTGGACTATAGCTATA--GCCACATCA 226
consensus_14349#1      GTACCATCCTGAAGGAACCGAGGGGCGTGACCACCGGCAGATGAGTGTGCTGCAGCAGCA 290
                       *     * **  *      * * *   **      **   **   * *   **  ** **

consensus_14349#0      TGTTTGTCCATCTGAAA-AAACAATGGAAATAAGGTTTACCGGTTGGAA-CATACAT--- 949
consensus_14349#2      TGTTTGTCCATCTGAAA-AAACAATGGAAATAAGGTTTACCGGTTGGAA-CATACAT--- 281
consensus_14349#1      TGTGGCTTTCTTCGACCTGGATGGCGACGGTATCGTTTATCCATGGGAAACTTATGGAGG 350
                       ***   *   *  **     *    *    **  ***** *  * **** * **      

consensus_14349#0      TATGTACTATC---CATGTG-----ATTATTGAAATGTGTCTGTAACCTGAAAGTGTGAT 1001
consensus_14349#2      TATGTACTATC---CATGTG-----ATTATTGAAAAAAAAAAAAAAAAAAAAAAAAAAAA 333
consensus_14349#1      TACATACTACAAAACATATAGCTCCATTGTTGCTGCGGAAAAAAAAATTAAACGGCTATT 410
                       **  *****     *** *      *** ***            **    **        

consensus_14349#0      TGACATATA--AAATTCTGTGATTGAA-GTAAAGGTAAGCATTACTAAAAAAAAAAAAAA 1058
consensus_14349#2      AAAAAAAAG--AAAAAAAAC-ACTGTG-ATGCCG-------------------------- 363
consensus_14349#1      ATTGTTCAGCCGAATAAAATATTTGTATATATCGGGAAGATCATTCAGCCCGATAGAATC 470
                                   **         **    *   *                          

consensus_14349#0      AAAAAAAAAAAA- 1070
consensus_14349#2      -------------
consensus_14349#1      ATATTCTACAGTA 483