cluster # 1439

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Oryza sativa
cluster # 1439 cluster # 1439 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1439#0 length = 1530 sequences # 2
consensusID : consensus_1439#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1530
fasta sequence
                              [CGTCGTCTCGTCCCCCTCCCCCCGCCCAGATCGCCCGACCGGCCGTTGCCCTCCGCTCCCCCACTGCCCCGCTCCCAGCTCTGATCCAGCAGGCGGCGGCGGCGGCGGCGGAGGAGAGGCAGCAGCAATGGCGACGTCCAAGAAGGATCCTCCGAGCAGGGACAGGGCTGCCAGGATGTCGCCGAACCTCAAGCGATCGTCAGGCATTGAGGCCTCCTCTGCCGCCGGCTATGGCCCGCGGAGGGCCCGGTCGGTCCCGAGCTCGCCGGACCGCAAGTTTGGCGCGGCGGCGGCGGCACCAGCGGCCGCCTCCGGCTCCCCGGACGTTTACAGGCCGTCGCTGTCTGCCGCTGGCCGGTCCACCTCGGCACGGTCTGTGTCCGGCAGCAGCAGAACCCAGCCATTCCCAAAGCCCACTCTCGCCAGAGTGAAGTCTGAAAGGGCCACCACCGCCGCCGCAGCCTCGCCACGGCCTCCAGCGCTGGCACCGCCAGCGAGCAATTCGCTCAAGGACATGGCCAGGACAGCACCATCAGCGTCTTCGAAAGCGCCATCCACCTTGCAGAAGAGCAAACTGTCTCCAAGGCCTAGCCCTGACAAGGCGGTGGCATCTCTGAAGCCGATCACCCAGAGATCGCCGGCTTCAGTGACTGCAAGAGGTGGAAGGACTACAGTAGTGTCGTCATCACGTGTACCGGGCAACATCGCTGCAAAGAAAAGAGCAGAATCTGCAAATGGTGGTAGTGCAAGCTCAAAGGCAAGAAGTGGTGCTCCTCAGAGGGCAATGGCGGCATCTGCAACCTCCAAGGAGGAGAAGGAAGATGAACCATCAATGCAATTCGAGGAATCTGAGAGCATCAGTACCCCGTCCATTGAAGACCACTTACACGAGCAGCTTCCCGATCCGGTTGATCTGAAACCCTTGGACATGTCTGCTTCTGATTCAGCTCTATATGGTCAGCAGGCACCATCGTCTGACATTCCAGAGCAACAAAGCAAGAATGAAGAAGTTAAGGAGAGCTTCTCTGAAGATAAAGATGTTGTGGTAGGCAATGAGCTGCATAATGGAGGCCAAGGTGCTGATGACATTGCAAAGAACATAACAGGCATTGTCAAGGCTGATGATCAATCCCAGCTTGCAGAGAAGGAAGAGGCGAGAGCGAAAGTGGACAAGGTTTGGAGAAAAGATGAACCGAAGAGCAACGATGTGATTGAGGAAACCAAAAGCAAACTCCTTGAGGAGAGGAAGAGCAGGGTGAAGGCTCTGGTAGGCG-CGTTCGAGACCGTCATGTCCTTCAAGGAATAGTGCTCAGCCTACAATGCCCATGCCCATCTCAGGATGAGTTACTCCTGCCATGAAAATATATCCAATCACGAGTTATGTTCATATGATGAGTTCCTTGGTTCATTGTATTCGATGTGGTAATTTTTTTTCCCTCAATGGTCATTGCATTTGAATGTGGTTGTTGCTGCTGCTGTTCATGTAGAAATTGAATGAAATGTTGATTCTTGTTGATTGGGAGGGGAATT]

[+] EMBL AK072677             [CGTCGTCTCGTCCCCCTCCCCCCGCCCAGATCGCCCGACCGGCCGTTGCCCTCCGCTCCCCCACTGCCCCGCTCCCAGCTCTGATCCAGCAGGCGGCGGCGGCGGCGGCGGAGGAGAGGCAGCAGCAATGGCGACGTCCAAGAAGGATCCTCCGAGCAGGGACAGGGCTGCCAGGATGTCGCCGAACCTCAAGCGATCGTCAGGCATTGAGGCCTCCTCTGCCGCCGGCTATGGCCCGCGGAGGGCCCGGTCGGTCCCGAGCTCGCCGGACCGCAAGTTTGGCGCGGCGGCGGCGGCACCAGCGGCCGCCTCCGGCTCCCCGGACGTTTACAGGCCGTCGCTGTCTGCCGCTGGCCGGTCCACCTCGGCACGGTCTGTGTCCGGCAGCAGCAGAACCCAGCCATTCCCAAAGCCCACTCTCGCCAGAGTGAAGTCTGAAAGGGCCACCACCGCCGCCGCAGCCTCGCCACGGCCTCCAGCGCTGGCACCGCCAGCGAGCAATTCGCTCAAGGACATGGCCAGGACAGCACCATCAGCGTCTTCGAAAGCGCCATCCACCTTGCAGAAGAGCAAACTGTCTCCAAGGCCTAGCCCTGACAAGGCGGTGGCATCTCTGAAGCCGATCACCCAGAGATCGCCGGCTTCAGTGACTGCAAGAGGTGGAAGGACTACAGTAGTGTCGTCATCACGTGTACCGGGCAACATCGCTGCAAAGAAAAGAGCAGAATCTGCAAATGGTGGTAGTGCAAGCTCAAAGGCAAGAAGTGGTGCTCCTCAGAGGGCAATGGCGGCATCTGCAACCTCCAAGGAGGAGAAGGAAGATGAACCATCAATGCAATTCGAGGAATCTGAGAGCATCAGTACCCCGTCCATTGAAGACCACTTACACGAGCAGCTTCCCGATCCGGTTGATCTGAAACCCTTGGACATGTCTGCTTCTGATTCAGCTCTATATGGTCAGCAGGCACCATCGTCTGACATTCCAGAGCAACAAAGCAAGAATGAAGAAGTTAAGGAGAGCTTCTCTGAAGATAAAGATGTTGTGGTAGGCAATGAGCTGCATAATGGAGGCCAAGGTGCTGATGACATTGCAAAGAACATAACAGGCATTGTCAAGGCTGATGATCAATCCCAGCTTGCAGAGAAGGAAGAGGCGAGAGCGAAAGTGGACAAGGTTTGGAGAAAAGATGAACCGAAGAGCAACGATGTGATTGAGGAAACCAAAAGCAAACTCCTTGAGGAGAGGAAGAGCAGGGTGAAGGCTCTGGTAGGCG CGTTCGAGACCGTCATGTCCTTCAAGGAATAGTGCTCAGCCTACAATGCCCATGCCCATCTCAGGATGAGTTACTCCTGCCATGAAAATATATCCAATCACGAGTTATGTTCATATGATGAGTTCCTTGGTTCATTGTATTCGATGTGGTAATTTTTTTTCCCTCAATGGTCATTGCATTTGAATGTGGTTGTTGCTGCTGCTGTTCATGTAGAAATTGAATGAAATGTTGATTCTTGTTGATTGGGAGGGGAATT]
[+] EMBL C73355               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGCTTCTCTGAAGATAAAGATGTTGTGGTAGGCAATGAGCTGCATAATGGAGGCCAAGGTGCTGATGACATTGCAAAGAACATAACAGGCATTGTCAAGGCTGATGATCAATCCCAGCTTGCAGAGAAGGAAGAGGCGAGAGCGAAAGTGGACAAGGTTTGGAGAAAAGATGAACCGAAGAGCAACGATGTGATTGAGGAAACCAAAAGCAAACTCCTTGAGGAGAGGAAGAGCAGGGTGAAGGCTCTGGTAGGCGCCGTTCGAGACCGTCATGTCCTTCAAGGAATAGTGCTCAGCCTACAATGCCCATGCCCATCTCAGGATGAGTTACTCCTGCCATGAAAATATATCCAATCACGAGTTATGTTCATATGATGAGTTCCTTGGTTCATTGTATTCGATGTGGTAATTTTTTTTCCCTCAATGGTCATTGCATTTGAATGTGGTTGTTGCTGCTGCTG TCATGTAGAAATTGAATGAAATGTTGATTCTTGTTGATTGGGANGGGAAaa]




>consensus_1439#0
CGTCGTCTCGTCCCCCTCCCCCCGCCCAGATCGCCCGACCGGCCGTTGCCCTCCGCTCCC
CCACTGCCCCGCTCCCAGCTCTGATCCAGCAGGCGGCGGCGGCGGCGGCGGAGGAGAGGC
AGCAGCAATGGCGACGTCCAAGAAGGATCCTCCGAGCAGGGACAGGGCTGCCAGGATGTC
GCCGAACCTCAAGCGATCGTCAGGCATTGAGGCCTCCTCTGCCGCCGGCTATGGCCCGCG
GAGGGCCCGGTCGGTCCCGAGCTCGCCGGACCGCAAGTTTGGCGCGGCGGCGGCGGCACC
AGCGGCCGCCTCCGGCTCCCCGGACGTTTACAGGCCGTCGCTGTCTGCCGCTGGCCGGTC
CACCTCGGCACGGTCTGTGTCCGGCAGCAGCAGAACCCAGCCATTCCCAAAGCCCACTCT
CGCCAGAGTGAAGTCTGAAAGGGCCACCACCGCCGCCGCAGCCTCGCCACGGCCTCCAGC
GCTGGCACCGCCAGCGAGCAATTCGCTCAAGGACATGGCCAGGACAGCACCATCAGCGTC
TTCGAAAGCGCCATCCACCTTGCAGAAGAGCAAACTGTCTCCAAGGCCTAGCCCTGACAA
GGCGGTGGCATCTCTGAAGCCGATCACCCAGAGATCGCCGGCTTCAGTGACTGCAAGAGG
TGGAAGGACTACAGTAGTGTCGTCATCACGTGTACCGGGCAACATCGCTGCAAAGAAAAG
AGCAGAATCTGCAAATGGTGGTAGTGCAAGCTCAAAGGCAAGAAGTGGTGCTCCTCAGAG
GGCAATGGCGGCATCTGCAACCTCCAAGGAGGAGAAGGAAGATGAACCATCAATGCAATT
CGAGGAATCTGAGAGCATCAGTACCCCGTCCATTGAAGACCACTTACACGAGCAGCTTCC
CGATCCGGTTGATCTGAAACCCTTGGACATGTCTGCTTCTGATTCAGCTCTATATGGTCA
GCAGGCACCATCGTCTGACATTCCAGAGCAACAAAGCAAGAATGAAGAAGTTAAGGAGAG
CTTCTCTGAAGATAAAGATGTTGTGGTAGGCAATGAGCTGCATAATGGAGGCCAAGGTGC
TGATGACATTGCAAAGAACATAACAGGCATTGTCAAGGCTGATGATCAATCCCAGCTTGC
AGAGAAGGAAGAGGCGAGAGCGAAAGTGGACAAGGTTTGGAGAAAAGATGAACCGAAGAG
CAACGATGTGATTGAGGAAACCAAAAGCAAACTCCTTGAGGAGAGGAAGAGCAGGGTGAA
GGCTCTGGTAGGCGCGTTCGAGACCGTCATGTCCTTCAAGGAATAGTGCTCAGCCTACAA
TGCCCATGCCCATCTCAGGATGAGTTACTCCTGCCATGAAAATATATCCAATCACGAGTT
ATGTTCATATGATGAGTTCCTTGGTTCATTGTATTCGATGTGGTAATTTTTTTTCCCTCA
ATGGTCATTGCATTTGAATGTGGTTGTTGCTGCTGCTGTTCATGTAGAAATTGAATGAAA
TGTTGATTCTTGTTGATTGGGAGGGGAATT
clustalw multiple alignements is not computed in this case