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Oryza sativa
cluster # 14433 cluster # 14433       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14433#0 length = 1161 sequences # 15  
consensus_14433#1 length = 437 sequences # 1  

consensusID : consensus_14433#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1161
fasta sequence
                              [AGACAAGGGGGACTCAATTCCAGTAACTTTCCTCTCATCTCTCACAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA-CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTCTCCTGGTGATTGC-CGGGTTCTTCGCGGCC---GC-TAT--CATTGGGAGCTGGTGCAATCTCCTCACTGTCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAATTTGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACCGTGTCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTTTCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAGGTGATTTGTGATTCAAAAAAAAAAAAA]

[-] EMBL CA759179             [AGACAAGGGGGACTCAATTCCAGTAACTTTCCTCTCATCTCTCACAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTCTCCTGGTGATTGC C                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK099414             [                      GTAACTTTCCTCTCATCTCTCACAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTCTCCTGGTGATTGC CGGGTTCTTCGCGGCC   GC TAT  CATTGGGAGCTGGTGCAATCTCCTCACTGTCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAATTTGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACCGTGTCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTTTCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAG                           ]
[+] EMBL AK059877             [                         ACTTTCCTCTCATCTCTCACAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTCTCCTGGTGATTGC CGGGTTCTTCGCGGCC   GC TAT  CATTGGGAGCTGGTGCAATCTCCTCACTGTCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAATTTGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACCGTGTCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTTTCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAGGTG                        ]
[+] EMBL CF281262             [                                TCTCATCTCTCACAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGGCCTGAAGAATTTTCTCCTGGTGATTGC CGGGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF297730             [                                            CAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF296200             [                                            CAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BI305984             [                                                                  TCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATAAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTTTCCTGGTGATTGCNCGGGTTCTTCGCGGCCCAAGCTTATTCCTTTAGGAGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF311811             [                                                                       TCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTCTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AY164898             [                                                                          GCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTCTCCTGGTGATTGC CGGGTTCTTCGCGGCC   GC TAT  CATTGGGAGCTGGTGCAATCTCCTCACTGTCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAATTTGGA                                                                                                                                                                                                    ]
[-] EMBL CB967036             [                                                                           CAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATAAAGCTAAGAGA CTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGC AACATTGGTTCTGC ATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAG ATTTTCTCCT GTGATTGC CGGGTTCTTC CGCCCAA GC TATtccctt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF307872             [                                                                                        TCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGACCTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF281263             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGGCCTGAAGAATTTTCTCCTGGTGATTGC CGGGTTCTTCGCGGCC   GC TAT  CATTGGGAGCTGGTGCAATCTCCTCACTGTCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGAG AAAAAGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTAAAAAAATGGAAAACACCGTGTCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTTTCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAGAGGTTATTTGTGATTCAAAAAAA      ]
[-] EMBL CF307873             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGGGTTCTTCGCGGCC   GC TAT  CATTGGGAGCTGGTGCAATCTCCTCACTGTCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTA   GCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAATTTGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACCGTGTCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTTTCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAGGTGATTTGTGATTCTAAAAAAAAAAAA]
[-] EMBL CF311812             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAATTTGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACCGTGTCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTTTCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAGGTGATTTGTGATTCTTTTAAAAAA   ]
[-] EMBL CF297731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGAGAAGAACCAAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATTAGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAATTTGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACCGTGTCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTTTCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAGGTGATTTGT ATTAAA           ]


>consensus_14433#0 AGACAAGGGGGACTCAATTCCAGTAACTTTCCTCTCATCTCTCACAGAAAAAACATTCCT CTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAG GCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGA ATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGC AGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGACTCTTCGGTG GTCAGAAGTCTGTCCATCATGTTTTGGGTGGTGGAAAATCCGCCGACGTGTTGTTGTGGA GGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGTTTTCTTCG AGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGGTTG TCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTCCTC GCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAGTGA ACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTCTCC TGGTGATTGCCGGGTTCTTCGCGGCCGCTATCATTGGGAGCTGGTGCAATCTCCTCACTG TCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACCAAG AAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGAAAC TTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCGATT AGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGTAAT TTGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACCGTG TCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATTGTT TCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAGGTGATT TGTGATTCAAAAAAAAAAAAA



consensusID : consensus_14433#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 437
fasta sequence
                              [ATGGATGAAGGAGTAGAAAAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGAACTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGT]

[+] EMBL CF317500             [ATGGATGAAGGAGTAGAAAAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGAACTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTTGGGTTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGT]


>consensus_14433#1 ATGGATGAAGGAGTAGAAAAGAAAAAACATTCCTCTCATCTCCAATCAGCAGCTATCTCC CTTCCTCATCACCAGCTTGCTGTGATCTTATCAGGCCTTTTTGTTGTTCTGCTGGTCTTG CTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGAATGCGGCTGCGAACATTGTGGACAGC ATAGTGGACGCCATTGCCGACAATCTTCCCAAGCAGAAGTCAGTCAGATTTGAAGATGGC TCAATCTCTGATCAAGCTAAGAGAACTCTTCGGTGGTCAGAAGTCTGTCCATCATGTTTT GGGTTGGTGGAAAATCCGCCGACGTGTTGTTGTGGAGGAACAAGAAGATATCTTCAAGTG TTCTTGCAGTTGCAACGGCTGTCTGGGGTTTTCTTCGAGTGGCTCGACTACCACTTCCTG ACGATTGCTTGCTTTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14433#0      AGACAAGGGGGACTCAATTCCAGTAACTTTCCTCTCATCTCTCACAGAAAAAACATTCCT 60
consensus_14433#1      --------------------------ATGGATGAAGGAGTAGAAAAGAAAAAACATTCCT 34
                                                  *           *   * ***************

consensus_14433#0      CTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAG 120
consensus_14433#1      CTCATCTCCAATCAGCAGCTATCTCCCTTCCTCATCACCAGCTTGCTGTGATCTTATCAG 94
                       ************************************************************

consensus_14433#0      GCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGA 180
consensus_14433#1      GCCTTTTTGTTGTTCTGCTGGTCTTGCTCGCGTGCAAAGAGATGCCGGAGCACTCTGAGA 154
                       ************************************************************

consensus_14433#0      ATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGC 240
consensus_14433#1      ATGCGGCTGCGAACATTGTGGACAGCATAGTGGACGCCATTGCCGACAATCTTCCCAAGC 214
                       ************************************************************

consensus_14433#0      AGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGA-CTCTTCGGT 299
consensus_14433#1      AGAAGTCAGTCAGATTTGAAGATGGCTCAATCTCTGATCAAGCTAAGAGAACTCTTCGGT 274
                       ************************************************** *********

consensus_14433#0      GGTCAGAAGTCTGTCCATCATGTTTTGGGT-GGTGGAAAATCCGCCGACGTGTTGTTGTG 358
consensus_14433#1      GGTCAGAAGTCTGTCCATCATGTTTTGGGTTGGTGGAAAATCCGCCGACGTGTTGTTGTG 334
                       ****************************** *****************************

consensus_14433#0      GAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGG-TTTTCT 417
consensus_14433#1      GAGGAACAAGAAGATATCTTCAAGTGTTCTTGCAGTTGCAACGGCTGTCTGGGGTTTTCT 394
                       ***************************************************** ******

consensus_14433#0      TCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGTTCTTGTTCTTGGCATGG 477
consensus_14433#1      TCGAGTGGCTCGACTACCACTTCCTGACGATTGCTTGCTTTGT----------------- 437
                       *******************************************                 

consensus_14433#0      TTGTCCAGTTTGCATGGTCCACTTTTGCAGGCATGCTAAATGGGTCACCTTCGAAAGTTC 537
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      CTCGCGTCGAATTGCCGGATGAGCTGTTCGCAAACATTGGTTCTGCAATTGGCACCCAAG 597
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      TGAACAAGTTCTTGGGCACTCTTCAGGATGTGTCTTGTGGAAGAGACCTGAAGAATTTTC 657
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      TCCTGGTGATTGCCGGGTTCTTCGCGGCCGCTATCATTGGGAGCTGGTGCAATCTCCTCA 717
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      CTGTCATTTACATTGGATTTGTGTGTGCTCACACTCTCCCGGTGCTGTATGAGAAGAACC 777
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      AAGAAAAAGTGGACGAGTTCCTGTACAACACACTTGGCCTGCTTCAGAATCAGTATCAGA 837
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      AACTTGACAAGGGTGTCCTGGGCAAGGTGCCCAAAGGGATCATCAAGCTTAAGAAGAGCG 897
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      ATTAGTTTCACTAGCTGCTGCTGCTGCTAATGCTGCGTACAGTCAATCAGAATACTGCGT 957
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      AATTTGGACAGATGTTAGCTTCCCCTGAACAGTTAATTGTGTACAGTATTGGAAAACACC 1017
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      GTGTCAGTGATGCTAGTGGTATACTCCTATATTGTAGGCCAAATTCATCAGTGGCAGATT 1077
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      GTTTCAGCTAGTCTCATGTGTTTTGCCCATGAGAGAAATTGGGAAAAAAAATAAAAGGTG 1137
consensus_14433#1      ------------------------------------------------------------
                                                                                   

consensus_14433#0      ATTTGTGATTCAAAAAAAAAAAAA 1161
consensus_14433#1      ------------------------
                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)