These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14447#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1087 fasta sequence [GTCTCCTCCTCCTCCTCCTCCGCCTCATCTCCACCACCACCGCGAGCTCGCCAGCGCCACGATTCCCGAGGCCCAGGAGAGCGCGAGCCGCCGCCACCGCAGCAGCAGCCTAGCTCCTAGCTAGCCAGCCATGGCGCTCGCCCACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACA-CGGTTCAATTTTTC-TCCCTGC-CATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTCTGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACCAGTCGATGGAGATACACTTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTATAAATTTATCCCAAATAGG] [+] EMBL AK066475 [GTCTCCTCCTCCTCCTCCTCCGCCTCATCTCCACCACCACCGCGAGCTCGCCAGCGCCACGATTCCCGAGGCCCAGGAGAGCGCGAGCCGCCGCCACCGCAGCAGCAGCCTAGCTCCTAGCTAGCCAGCCATGGCGCTCGCCCACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACA CGGTTCAATTTTTC TCCCTGC CATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTCTGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACCAGTCGATGGAGATACACTTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTATAAATTTATCCCAAATAG ] [-] EMBL CB682981 [ GATTT GGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATTTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTGTCCAGCTGCAGTTGAACACTTCTGAAGATTTGCTAGGGTATATAGCACTTGGCAAAGAGCGGTTCAATTTTTCTTCCCTGCACATTAGTTCACACTTCACACACCAGTAGTTTTAGGTATTCTTGGTGAGATTCTGCAGAACGGTTTCAGTGTTCCCTCTTACTGTAACCAGTGGATGGAGATACACTTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTATGAATCTAACAAAAAAAGG] consensusID : consensus_14447#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1051 fasta sequence [TACGAGGAGTACGAGGTGGAGATCCTGAAGCCGTACGGGCTCAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCATCCTCCCCGGCGCCGCCGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTC-TGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACC-AGTCGATGGAGATACAC-TTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTATAAATTTATCCCAAATAGTA] [+] EMBL AK062132 [TACGAGGAGTACGAGGTGGAGATCCTGAAGCCGTACGGGCTCAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCATCCTCCCCGGCGCCGCCGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTC TGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACC AGTCGATGGAGATACAC TTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTATAAATTTATCCCAAATAGTA] [+] EMBL CB685836 [TACGAGGAGTACGAGGTGGAGATCCTGAAGCCGTACGGGCTCAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCATCCTCCCCGGCGCCGCCGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAATATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGC ] [+] EMBL CB678036 [TACGAGGAGTACGAGGTGGAGATCCTGAAGCCGTACGGGCTCAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCATCCTCCCCGGCGCCGCCGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAG ] [+] EMBL CB682980 [TACGAGGAGTACGAGGTGGAGATCCTGAAGCCGTACGGGCTCAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCATCCTCCCCGGCGCCGCCGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCACGGCTGAGAGGAACTCCGGGGTGATCA ] [+] EMBL CB683619 [TACGAGGAGTACGAGGTGGAGATCCTGAAGCCGTACGGGCTCAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCATCCTCCCCGGCGCCGCCGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCACGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAACAGATTTGGGAAATGGGATGGTGCTGCTGACCTCAGTGAGAAGGAGATCATCATGGCTGAGAGGAA ] [-] EMBL CB682979 [ GGGTGGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTC TGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACC AGTCGATGGAGATACAC TTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCT ] [-] EMBL CB685837 [ AGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTC TGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACC AGTCGATGGAGATACAC TTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGAT ] [-] EMBL CB678037 [ GATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTC TGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACC AGTCGATGGAGATACAC TTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTA ] [+] EMBL OSA417523 [ TGTACAAGGATGGTAAATATGAGGAGGCGTTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTCTTGCAGAACGGGTTCAGTCTTCCCTCTTACTGTAACCAAGCCGGTGGAGATACACTTTTGTA ] [+] EMBL CB680693 [ GCTACACTGTTGCCTGCTGTTACTCTAAGCTTGACCGGATACAAGCTGGGATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGGTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTC TGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACC AGTCGATGGAGATACAC TTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGC ] consensusID : consensus_14447#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1017 fasta sequence [CCAAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCATCCTCCCCGGCGCCGCCGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTCCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTCTGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACCAGTCGATGGAGATACACTTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AF272978 [CCAAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCATCCTCCCCGGCGCCGCCGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCTCGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCATGTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAAATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCACCGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTACGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAACAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTCCTCCAGCTGCAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATTTTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGATTCTGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACCAGTCGATGGAGATACACTTTGTAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CB683149 [ AGATCATCAGGGCTGAGAGGAACTCCGGGGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCAGAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATATGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTCTTCCATAGCTAGATACAATGTTGCCTGGTGTTACTCGAAGTTTGACCGGATACAAGCTGGTATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTGGCCCCGACCCGGATTTAGAAAACTTGAGGAAAACTGAGGAATTTAATGTCCTGCTGAACAAGTATGATGAATCGTTCATCAATGAGAATGGTA ] consensusID : consensus_14447#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 388 fasta sequence [TTCCTGGCGCCACCACATCGCGGGAGATGAGCCACACAAGCGTCTCCTCCTCCTCCTCCTCCGCCTCATCTCCACCACCACCGCGAGCTCGCCAGCGCCACGATTCCCGAGGCCCAGGAGAGCGCGAGCCGCCGCCGCCGCAGCAGCAGCCTAGCTCCTAGCTAGCCAGCCATGGCGCTCGCCCACCAGCTGGTCGCCAACCGGCCGCTCCTCCCCACCCCGGCGCCGCGCGTCCCCAGGGCCAGCATCAGCAACGCGCGGCCGCAGCCACTTCTTGGCCGGGACTGCCGCCTGACGCTGCTGCGGGCGGAGAGGAGGACGCTCGCCGTCGCCCGGGCGTCGTCGTCGTCGTCGTCGTCGTCGTCGCAGACGGAGCCCAAGTCGGAGG] [+] EMBL CB621129 [TTCCTGGCGCCACCACATCGCGGGAGATGAGCCACACAAGCGTCTCCTCCTCCTCCTCCTCCGCCTCATCTCCACCACCACCGCGAGCTCGCCAGCGCCACGATTCCCGAGGCCCAGGAGAGCGCGAGCCGCCGCCGCCGCAGCAGCAGCCTAGCTCCTAGCTAGCCAGCCATGGCGCTCGCCCACCAGCTGGTCGCCAACCGGCCGCTCCTCCCCACCCCGGCGCCGCGCGTCCCCAGGGCCAGCATCAGCAACGCGCGGCCGCAGCCACTTCTTGGCCGGGACTGCCGCCTGACGCTGCTGCGGGCGGAGAGGAGGACGCTCGCCGTCGCCCGGGCGTCGTCGTCGTCGTCGTCGTCGTCGTCGCAGACGGAGCCCAAGTCGGAGG] [+] EMBL CA753915 [ CTCATCTCCACCACCACCGCGAGCTCGCCAGCGCCACGATTCCCGAGGCCCAGGAGAGCGCGAGCCGCCGCCGCCGCAGACGCAGCCTAGCTCCTAGCTAGCCAGCCATGGCGCTCCCCCACCAGCTGGTCGCCAACCGGCCGCTCCTCCCCACCCCGGCGCCGCGCGTCCCCAGGGCCAGCATCAGCAACGCGCGGCCGCAGCCACTTCTTGGCCGGGACTGCCGCCTGACGCTGCTGCGGGCGGAGAGGAGGACGCTCGCCGTCGCCCGGGCGTCGTCGTCGTCGTCGTCGTCGTCGTCGCAGACGGAGCCCAAGTCGGAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14447#1 ----------------------------------TACGAGGAGTACGAGGTGGAGATCCT 26 consensus_14447#2 ------------------------------------------------------------ consensus_14447#0 GTCTCCTCCTCCTCCTCCTCCGCCTCATCTCCACCACCACCGCGAGCTCGCCAGCGCCAC 60 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 GAAGCCGTACGGGCTCAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCAT 86 consensus_14447#2 -------------CCAAAGTTCGCCAAGGGCCGCGACGGCGGCACCTACATCGAGGCCAT 47 consensus_14447#0 GATTCCCGAGGCCCAGGAGAGCGCGAGCCGCCGCCACCGCAGCAGCAGCCTAGCTCCTAG 120 consensus_14447#3 ------TTCCTGGCGCCACCACATCGCGGGAGATGA--GCCACACAAGCGTCTCCTCCTC 52 * * * * * ** ** * * * consensus_14447#1 CCTCCCCGGCGCCGC---CGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCT 143 consensus_14447#2 CCTCCCCGGCGCCGC---CGCCGACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCT 104 consensus_14447#0 CTAGCCAGCCATGGCGCTCGCCCACCAGACCGGCAAGTTCGAAGTCGGCGACAAGGTCCT 180 consensus_14447#3 CTCCTCCTCCGCCTCA--TCTCCACCACCACCGCGAGCTCG---CCAGCGCCACGATTCC 107 * * * * * **** * ** ** *** * *** ** * * * consensus_14447#1 CGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCAT 203 consensus_14447#2 CGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCAT 164 consensus_14447#0 CGCCACCAGTGCTGTATTTGGGGAGGAAATCTGGCCGGCAGCAGGGTACGGACAGACCAT 240 consensus_14447#3 CGAGGCCCA----------GGAGAGCGCGAGCCGCCGCCGCCGCAGCAGCAGCCTAGCTC 157 ** ** ** *** **** * * * * * * * consensus_14447#1 GTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAA 263 consensus_14447#2 GTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAA 224 consensus_14447#0 GTACTGCATCCGTCAGAGGGTTGGCCCCCTCTACATGAAGATGGAGAAGAGATTTGGGAA 300 consensus_14447#3 CTAGCTAGCCAGCCATGGCGCTCGCCCACC--------AGCTGG----------TCGCCA 199 ** * * ** * * * **** * ** *** * * * consensus_14447#1 ATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGG 323 consensus_14447#2 ATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGG 284 consensus_14447#0 ATGGGATGGTGCTGCTGAGCTCAGTGAGAAGGAGATCATCAGGGCTGAGAGGAACTCCGG 360 consensus_14447#3 ACCGGCCGCTCCTCCCCACCCCGGCGCCGCGCG--TCCCCAGGGC------------CAG 245 * ** * * ** * * * * * * * ** ****** * * consensus_14447#1 GGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCA 383 consensus_14447#2 GGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCA 344 consensus_14447#0 GGTGATCAGCAACAGGGTGAGGGAGATCCAGCTGCAAAATTACCAGAGGAAGATGGAGCA 420 consensus_14447#3 CATCAGCAACGCGCGGCCGCAGCCACTTCTTGGCCGGGACTGCCGCCTGACGCTGCTGCG 305 * * ** * ** * * * * * * * ** ** * ** ** consensus_14447#1 GAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATA 443 consensus_14447#2 GAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATA 404 consensus_14447#0 GAAGATGCAGAGAGAGGAGGATCTTCGCATGGGGCTGAGGCTGTACAAGGATGGTAAATA 480 consensus_14447#3 GGCG-------GAGAGGAGGACGCTCGC-CGTCGCCCGGGCGTCGTCGTCGTCGTCGTCG 357 * * ********** **** * ** *** * ** consensus_14447#1 TGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTC 503 consensus_14447#2 TGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTC 464 consensus_14447#0 TGAGGAGGCATTGGAGAAGTTCGAGTCAGTTTTGGGATCAAAACCTGAGATCAATGAGTC 540 consensus_14447#3 TC-GTCGTCGCAGACGGAGCCCAAGTCGGAGG---------------------------- 388 * * * * * * ** * **** * consensus_14447#1 TTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGG 563 consensus_14447#2 TTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGG 524 consensus_14447#0 TTCCATAGCTAGCTACAATGTTGCCTGCTGTTACTCGAAGCTTGACCGGATACAAGCTGG 600 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 TATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCAC 623 consensus_14447#2 TATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCAC 584 consensus_14447#0 TATTTCTGCACTGGAAGATGCCCTGAAAGCAGGTTATGAAGACTTCAAGAGAATTCGCAC 660 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 CGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTA 683 consensus_14447#2 CGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTA 644 consensus_14447#0 CGACCCGGATCTAGAAAACTTGAGGAAAACTGAGGAATTCAACGTCCTGCTGAACAAGTA 720 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 CGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAA 743 consensus_14447#2 CGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAA 704 consensus_14447#0 CGACGAATCGTTCATCAATGAGAATGCTATCAACGCCATCAAATCCTTGTTTGGATTCAA 780 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 CAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTG 803 consensus_14447#2 CAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTCCTCCAGCTG 764 consensus_14447#0 CAAGAAATGAGCACTGAACTGGTCATGGTGGTAGGAGATATTGCATCTTTTCTCCAGCTG 840 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 CAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATT 863 consensus_14447#2 CAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATT 824 consensus_14447#0 CAGTTGAACACTTCTGAAGCTTTGCTAGGCTATATAGCACTTGGCAAACACGGTTCAATT 900 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 TTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGA 923 consensus_14447#2 TTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGA 884 consensus_14447#0 TTTCTCCCTGCCATTAGTTCACACTTCACACACCAGTAGTTTTAGCTATTCTTGGTGAGA 960 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 TTCTGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACCAGTCGATGGAGATACACTTTG 983 consensus_14447#2 TTCTGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACCAGTCGATGGAGATACACTTTG 944 consensus_14447#0 TTCTGCAGAACGGTTTCAGTCTTCCCTCTTACTGTAACCAGTCGATGGAGATACACTTTG 1020 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 TAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTATAAATTTATCCC 1043 consensus_14447#2 TAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTAAAAAAAAAAAAA 1004 consensus_14447#0 TAAATTCAAGCAACCAAATGTTAAGGAAATATATTGTGATTGTGCTTATAAATTTATCCC 1080 consensus_14447#3 ------------------------------------------------------------ consensus_14447#1 AAATAGTA----- 1051 consensus_14447#2 AAAAAAAAAAAAA 1017 consensus_14447#0 AAATAGG------ 1087 consensus_14447#3 ------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||