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Oryza sativa
cluster # 14448 cluster # 14448       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14448#0 length = 1004 sequences # 15  
consensus_14448#1 length = 360 sequences # 1  

consensusID : consensus_14448#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1004
fasta sequence
                              [CATGGACTGAAGGAGTAGAAAGTGACTCTTGGTTCGCTTTGGGTCATTCCGTTCCGCCGCATCCTCCTCTGCCGTAGCTTTAGGTTTTACCTCCTCTCCCGACTCTCCTCCGCTTTAATCGCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCAGAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCCTGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAAATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCGTGATGGTCCTTACATGCCAA-CCTTGCGCCTTC-TTCATCAGTATCCTGACATCATGAAGAAGTTCCAAG-TGGATAGA-GGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGAT-GTTGAAGTTGAGG-AGGAAACACCAGT-GGCT-ATAATGGCTGAAGGCAAACAGCATGCATTG-GCA-ATT--GGATATA-CAAAGATGTCA-GCAAAGGACA-TTAAGACTATCAACAAAGGAA-TTGGAGTTGAC-AATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC-GAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT-GGCAAAACTTTGA-CTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCCTATCACTAATGATTTGCACTTATTACCAATAAAATTTCAGATGAGCTATTTTTTGTTTAAAAAA]

[+] EMBL CF316682             [CATGGACTGAAGGAGTAGAAAGTGACTCTTGGTTCGCTTTGGGTCATTCCGTTCCGCCGCATCCTCCTCTGCCGTAGCTTTAGGTTTTACCTCCTCTCCCGACTCTCCTCCGCTTTAATCGCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCAGAATCAAGTTGAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCCTGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAAATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCGTGATGGTCCTTACATGCCAA CCTTGCGCCTTC TTCATCAGTATCCTGACATCATGAAGATGTTCCAAG TGGATAGA GGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGATGGTTGAAGTTGAGG AGGAAACACCAGT GGCT ATAATGGCTGAAGGCAAACAGCATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK073419             [                             TGGTTCGCTTTGGGTCATTCCGTTCCGCCGCATCCTCCTCTGCCGTAGCTTTAGGTTTTACCTCCTCTCCCGACTCTCCTCCGCTTTAATCGCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCAGAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCCTGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAAATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCGTGATGGTCCTTACATGCCAA CCTTGCGCCTTC TTCATCAGTATCCTGACATCATGAAGAAGTTCCAAG TGGATAGA GGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGAT GTTGAAGTTGAGG AGGAAACACCAGT GGCT ATAATGGCTGAAGGCAAACAGCATGCATTG GCA ATT  GGATATA CAAAGATGTCA GCAAAGGACA TTAAGACTATCAACAAAGGAA TTGGAGTTGAC AATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT GGCAAAACTTTGA CTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCCTATCACTAATGATTTGCACTTATTACCAATAAAATTT                           ]
[+] EMBL CF332270             [                                                        CCGCATCCTCCTCTGCCGTAGCTTTAGGTTTTACCTCCTCTCCCGACTCTCCTCCGCTTTAATCGCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCAGAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCCTGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAAATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCGTGATGGTCCTTACATGCCAA CCTTGCGCCTTC TTCATCAGTATCCTGACATCATGAAGAAGTTCCAAG TGGATAGA GGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGAT GTTGAAGTTGAGG AGGAAACACCAGT GGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF296462             [                                                                              TTTAGGTTTTACCTCCTCTCCCGACTCTCCTCCGCTTTAATCGCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCAGAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCCTGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAAATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCGTGATGGTCCTTACATGCCAA CCTTGCGCCTTC TTCATCAGTATCCTGACATCATGAAGAAGTTCCAAG TGGATAGA GGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGAT GTTGAAGTTGAGG AGGAAACACCAGT GGCT ATAATGGCTGAAGGCAAGCAGCATGCATTG GCA ATT  GGATATA CAAAGATGTCA GCAA                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK104939             [                                                                                 AGGTTTTACCTCCTCTCCCGACTCTCCTCCGCTTTAATCGCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCAGAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCCTGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAAATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCGTGATGGTCCTTACATGCCAA CCTTGCGCCTTC TTCATCAGTATCCTGACATCATGAAGAAGTTCCAAG TGGATAGA GGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGAT GTTGAAGTTGAGG AGGAAACACCAGT GGCT ATAATGGCTGAAGGCAAACAGCATGCATTG GCA ATT  GGATATA CAAAGATGTCA GCAAAGGACA TTAAGACTATCAACAAAGGAA TTGGAGTTGAC AATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT GGCAAAACTTTGA CTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTA                                                                               ]
[+] EMBL CA760370             [                                                                                         CCTCCTCTCCCGACTCTCCTCCGCTTTAATCGCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCAGAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCCTGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAAATGCCAAAATCATCTGAATCTTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL C27733               [                                                                                                             CCGCTTTAATCGCACCGCCGGCCGCCGG GACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCAGAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCCTGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAAATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCGTGATGGTCCTTACATGCCAA CCTTGCGNCTTCTTTCATCAGTATCCTGACATCATGAAGAAGTTCCAAG TGGATAGANGGCGCTATCAAGTTTGTTCTCTCTGGTGC AACATAATGTGTCCTGGATTGACATCT CANGTGGTTCCTTGGAT GTTGAAGTTGANG AGGGAACACCAGT GGGT ATAATGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB483501             [                                                                                                                                                                                                                                                                CTAGACGACTTACTTCC AAGAAGTCGCCTATGATTGTTGTTAAATGCC AAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCGTGATGGTCCTTACATGCCAACCCTTGCGCCTTC TTCATCAGTATCCTGACATCATGAAGAAGTTCCAAG TGGATAGA GGCGCTATCAAGTTTGTTCTCTCTGGTGC AACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGAT GTTGAAGTTGAGG AGGAAACACCAGT GGCT ATAATGGCTGAAGGCAAACAGCAAGCATTG GC  ATT  GGATATA CAAAGATGTCA GCAAAGGACA TTAAGACTATCAACAAAGGAA TTGGAGTTGAC  ATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATC ATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACAT GTGCTCCAA                                                                                                                                                                                               ]
[+] EMBL CB683687             [                                                                                                                                                                                                                                                                                                                                                              TCAATATCCGTGATGGTCCTTACATGCCAA CCTTGCGCCTTC TTCATCAGTATCCTGACATCATGAAGAAGTTCCAAG TGGATAGA GGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGAT GTTGAAGTTGAGG AGGAAACACCAGT GGCT ATAATGGCTGAAGGCAAACAGCATGCATTG GCA ATT  GGATATA CAAAGATGTCA GCAAAGGACA TTAAGACTATCAACAAAGGAA TTGGAGTTGAC AATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT GGCAAAACTTTGA CTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCCTATCACTAATGATTTGCACTTATTACCAATAAAATTT                           ]
[+] EMBL CB678749             [                                                                                                                                                                                                                                                                                                                                                                                                                               tgaatcctTTCCAAGATGGATAGA GGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCCTGGATTGACATCTCCAGGTGGTTCCTTGGAT GTTGAAGTTGAGGTAGGAAACACCATTAGGCT ATAATGGCTGAAGGCAAACATCATGCATTG GCA ATT  GGATATA CAAAGATGTCA TCAAAGGACA TTAATACTATCAACAAAGGAA TTGGAGTTGAC AATATGCACTATCTAAATGATGGCCTGTGGAATATGGAACGGCTCATAATAAGTAAAATCCACTATGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGATGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCATCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT GGCAAAACTTTAA CTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTA                                                                               ]
[-] EMBL CF311097             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTTGGAT GTTGAAGTTGAGG AGGAAACACCAGT GGCTAATAATGGCTGAAGGCAAACAGCATGCATTG GCA ATT  GGATATA CAAAGATGTCA GCAAAGGACA TTAAGACTATCAACAAAGGAA TTGGAGTTGAC AATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT GGCAAAACTTTGA CTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCCTATCACTAATGATTTGCACTTATTACCAATAAAATTTCAGATGAGCTATTTTTTGTTTAAAA  ]
[-] EMBL CF316683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGGCAAACAGCATGCATTG GCA ATT  GGATATA CAAAGATGTCA GCAAAGGACA TTAAGACTATCAACAAAGGAA TTGGAGTTGAC AATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT GGCAAAACTTTGA CTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCaaaaaa                                                           ]
[+] EMBL AU029843             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGCAACCAGCATGCATTG GCA ATT  GGATATC CAAAGATGTCA GCAAAGGCCA TTAAGACTATCAACAAAGGAA TTGGAGTTGAC AATATGCACTATCTAAATGATGNCCTGTGGAAGATGGANCGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTT NTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT GGCAAAACTTTGA CTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCCTATCACTAATGATTTGCACTTATTACCAATAAAATTTCAGATGAGCTATTTTTTGTTTAAAAAA]
[+] EMBL AU029842             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACAGCATGCATTG GCA ATT  GGATATA CAAAGATGTCA GCAAAGGACA TTAAGACTATCAACAAAGGAA TTGGAGTTGAC AATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAA CCTGTTCGAGTTTACTGTGNCCATCAAGTTTTGGAGATGTTTGGGCNAACTTTTGA CTGATAGTGCTGTGTTC ACGCTTCACTTGGGAATATC ATCCAGGACn                                                                                    ]
[+] EMBL BQ905950             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gGCATTGNCCANATTGGGGATATACCCAAGATGTCACGCAAAGGACANTTAAGACTATCTACAAAGGAATTTGGAGTTGACAAATATGCACTATCTAAATGATGGCCTGTGGAAGATGGAACGGCTC GAATAAGTAAAATCCACTAGGGAAGCATAATTCGCTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAACACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCATCAAGTTTTGGAGATGTTT GGCAAAACTTTGACCTGATAGTGCTGTGTTCAACGCTTCACTTGGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCCTATCACTAATGATTTGCACTTATTACCAATAAAAaaaaaa                        ]


>consensus_14448#0 CATGGACTGAAGGAGTAGAAAGTGACTCTTGGTTCGCTTTGGGTCATTCCGTTCCGCCGC ATCCTCCTCTGCCGTAGCTTTAGGTTTTACCTCCTCTCCCGACTCTCCTCCGCTTTAATC GCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCA GAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCC TGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAA ATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCG TGATGGTCCTTACATGCCAACCTTGCGCCTTCTTCATCAGTATCCTGACATCATGAAGAA GTTCCAAGTGGATAGAGGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCC TGGATTGACATCTCCAGGTGGTTCCTTGGATGTTGAAGTTGAGGAGGAAACACCAGTGGC TATAATGGCTGAAGGCAAACAGCATGCATTGGCAATTGGATATACAAAGATGTCAGCAAA GGACATTAAGACTATCAACAAAGGAATTGGAGTTGACAATATGCACTATCTAAATGATGG CCTGTGGAAGATGGAACGGCTCGAATAAGTAAAATCCACTAGGGAAGCATAATTTGCTGC GCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATGTAAA CACATAAAATAGCCAGCAGCTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTGACCAT CAAGTTTTGGAGATGTTTGGCAAAACTTTGACTGATAGTGCTGTGTTCAACGCTTCACTT GGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCCTATCACTAATGATTTGCACT TATTACCAATAAAATTTCAGATGAGCTATTTTTTGTTTAAAAAA



consensusID : consensus_14448#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 360
fasta sequence
                              [AACAGCGTGCCTTGGCAATTGGGATATACAAAAGATGTCAGCAAAGGGACATNAAGACNGTCGGNCAAANGAATTGGAGTTGACNATATGCACTATCTAAATGATGGCCTGTGGAANATGGAACGGCTCNAATAAGTTNAATCCNCTACGGAAGCATAATTTGCTGCNCCNTATTGAAATGTNATGAGGGCTGGAATTATGTATCACTGCATCTCGTGTCATGTNAACACATAAAATAGCCAGCGGGNNGCGTGGTGCTCCANNCCTGTTCCANTTTACTGTGACCATCAAGTTTTGGGAGATGTTTGGCCCNACTTTNACTGNTTTTGCTGTGTTCCACNCTTCCACTTGGTATTATCA]

[+] EMBL BE228739             [AACAGCGTGCCTTGGCAATTGGGATATACAAAAGATGTCAGCAAAGGGACATNAAGACNGTCGGNCAAANGAATTGGAGTTGACNATATGCACTATCTAAATGATGGCCTGTGGAANATGGAACGGCTCNAATAAGTTNAATCCNCTACGGAAGCATAATTTGCTGCNCCNTATTGAAATGTNATGAGGGCTGGAATTATGTATCACTGCATCTCGTGTCATGTNAACACATAAAATAGCCAGCGGGNNGCGTGGTGCTCCANNCCTGTTCCANTTTACTGTGACCATCAAGTTTTGGGAGATGTTTGGCCCNACTTTNACTGNTTTTGCTGTGTTCCACNCTTCCACTTGGTATTATCA]


>consensus_14448#1 AACAGCGTGCCTTGGCAATTGGGATATACAAAAGATGTCAGCAAAGGGACATNAAGACNG TCGGNCAAANGAATTGGAGTTGACNATATGCACTATCTAAATGATGGCCTGTGGAANATG GAACGGCTCNAATAAGTTNAATCCNCTACGGAAGCATAATTTGCTGCNCCNTATTGAAAT GTNATGAGGGCTGGAATTATGTATCACTGCATCTCGTGTCATGTNAACACATAAAATAGC CAGCGGGNNGCGTGGTGCTCCANNCCTGTTCCANTTTACTGTGACCATCAAGTTTTGGGA GATGTTTGGCCCNACTTTNACTGNTTTTGCTGTGTTCCACNCTTCCACTTGGTATTATCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14448#0      CATGGACTGAAGGAGTAGAAAGTGACTCTTGGTTCGCTTTGGGTCATTCCGTTCCGCCGC 60
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      ATCCTCCTCTGCCGTAGCTTTAGGTTTTACCTCCTCTCCCGACTCTCCTCCGCTTTAATC 120
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      GCACCGCCGGCCGCCGGCGACCATGTTCAAAAAGTTCTCTTTTGAAGATATATCTGCGCA 180
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      GAATCAAGTTAAGGCCTCTGTGCAGCGGAAGATTCGGCAAAGTATTGCTGATGAGTACCC 240
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      TGGCCTCGAACCTCTACTAGATGACTTACTTCCAAAGAAGTCGCCTATGATTGTTGTTAA 300
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      ATGCCAAAATCATCTGAATCTTGTGGTGGTGAATAATGTCCCACTGTTTTTCAATATCCG 360
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      TGATGGTCCTTACATGCCAACCTTGCGCCTTCTTCATCAGTATCCTGACATCATGAAGAA 420
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      GTTCCAAGTGGATAGAGGCGCTATCAAGTTTGTTCTCTCTGGTGCAAACATAATGTGTCC 480
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      TGGATTGACATCTCCAGGTGGTTCCTTGGATGTTGAAGTTGAGGAGGAAACACCAGTGGC 540
consensus_14448#1      ------------------------------------------------------------
                                                                                   

consensus_14448#0      TATAATGGCTGAAGGCAAACAGCATGCATTGGCAATTGG-ATATACAAA-GATGTCAGCA 598
consensus_14448#1      -----------------AACAGCGTGCCTTGGCAATTGGGATATACAAAAGATGTCAGCA 43
                                        ****** *** *********** ********* **********

consensus_14448#0      AAGG-ACATTAAGACTATCA-ACAAAGGAATTGGAGTTGACAATATGCACTATCTAAATG 656
consensus_14448#1      AAGGGACATNAAGACNGTCGGNCAAANGAATTGGAGTTGACNATATGCACTATCTAAATG 103
                       **** **** *****  **   **** ************** ******************

consensus_14448#0      ATGGCCTGTGGAAGATGGAACGGCTCGAATAAGTAAAATCCACTAGGGAAGCATAATTTG 716
consensus_14448#1      ATGGCCTGTGGAANATGGAACGGCTCNAATAAGTTNAATCCNCTACGGAAGCATAATTTG 163
                       ************* ************ *******  ***** *** **************

consensus_14448#0      CTGCGCCATATTGAAATGTAATGAGGGCTGGAATTATGTATCAATGCATCTTGTGTCATG 776
consensus_14448#1      CTGCNCCNTATTGAAATGTNATGAGGGCTGGAATTATGTATCACTGCATCTCGTGTCATG 223
                       **** ** *********** *********************** ******* ********

consensus_14448#0      TAAACACATAAAATAGCCAGCAG-CTACATGGTGCTCCAAGCCTGTTCGAGTTTACTGTG 835
consensus_14448#1      TNAACACATAAAATAGCCAGCGGGNNGCGTGGTGCTCCANNCCTGTTCCANTTTACTGTG 283
                       * ******************* *    * **********  ******* * *********

consensus_14448#0      ACCATCAAGTTTTGG-AGATGTTTGGCAAAACTTTGACTGATAGTGCTGTGTTCAACGCT 894
consensus_14448#1      ACCATCAAGTTTTGGGAGATGTTTGGCCCNACTTTNACTGNTTTTGCTGTGTTCCACNCT 343
                       *************** ***********   ***** **** *  ********** ** **

consensus_14448#0      TC-ACTTGGTATTATCAATCCAGAACACTGTACAATGTTGGTAATCCTATCACTAATGAT 953
consensus_14448#1      TCCACTTGGTATTATCA------------------------------------------- 360
                       ** **************                                           

consensus_14448#0      TTGCACTTATTACCAATAAAATTTCAGATGAGCTATTTTTTGTTTAAAAAA 1004
consensus_14448#1      ---------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)