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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14492#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1154 fasta sequence
[CTTTTTTTTTTTTTTGGGCACAACCGATGTGATAGGCTTTCCATTTCAGTGTGTAGATCAGGACAACATATATATTGTCTAACACAAGGCAACAACTAACAGAAACTATAATTTCTCAGGTGTCATGCTTATCAGATGTCCAGCACAAAGGGCATAAGCATAGTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCC-AACATCTAGATTTCTTGTA-TTTGT-CGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAA-TGGTATTATGGTTTAACAGCTGCTACTG-ATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAA-AGTTGTCCACCAAC-TGCA-CATCGGAGGGA-GGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACC-A-GTGCTATTAATAATTACGATCAATAAA-AGGATGCATCC-TGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTC-AAC-TGCTCTGATGTA-TTA-GCCTTTA-TGC-TGACCCGTCCAGTTAATT-TGTTGGTC-AACTCAACATGAACAGCCACGTTTGAAGCTCTTCCCATAGAGAACTGGGAATCCCGGACGCCAGCCATGCTCCATTCTTTATGCCATCTAACCAGGGATGCTCCCAAAATTGCAAGGTCTTGACCCATCAGATAGTCTTTCTCTCGCAGAGTTGCCTCCATATTCACTCCATATGCAGTATCACCTCTAATGGACACAGCACCAGTGTTTGCTAACAATGTTAATCTATCACCTACTGATAGCTTGTCTTCAAACTTCGCTCCGGTCGCCATAGTATCTCCCAAGAAAGTCATGGACAAACCTCCGGTAGTTGTGTTTTTCTTGGAGTTCTTGAATTTGCTCTCCCCTCTAAGAGTGTAAGCAAGCTGGTCCATTATGGTTTGGATGTCGAAGCCTGCAAGGCTTGAAACATTTTCCCTATGCTTAGCTGATATTGAGGACCACCAAATGAATGGT]
[+] EMBL CB634650 [CTTTTTTTTTTTTTTGGGCACAACCGATGTGATAGGCTTTCCATTTCAGTGTGTAGATCAGGACAACATATATATTGTCTAACACAAGGCAACAACTAACAGAAACTATAATTTCTCAGGGGTCATGCTTATCAGATGTCCAGCACAAAGGGCATAAGCATAGTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCC AACATCTAGATTTCTTGTA TTTGT CGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAA TGGTATTATGGTTTAACAGCTGCTACTG ATCACAAGTTTCTCCAAAACAAAAGTAGATCTTCTTCTGCTCTTAA AGTTGTCCACCAAC TGCA CATCGGAGGGA GGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACC A GTGCTATTAATAATTACGATCAATAAA AGGATGCATCC TGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTC AAC TGCTCTGATGTA TTA GCCTTTA TGC TGACCCGTCCAGTTAATT TGTTGGTC AA ]
[-] EMBL BQ907468 [ ttttTAGATCAGGACAACATATATATTGTCTAACACAAGGCAACAACTAACAGAAACTATAATTTCTCAGGTGTCATGCTTATCAGATGTCCAGCACAAAGGGCATAAGCATAGTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCC TGTTTTACCC AACATCTAGATTTCTTGTA TTTGT CGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAAGTGGTATTATGGTTTAACAGCTGCTACTG ATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCgg ]
[-] EMBL BI809419 [ TTTTTTAACACAAGGCAACAACTAACAGAAACTATAATTTCTCAGGTGTCATGCTTATCAGATGTCCAGCACAAAGGGCATAAGCATAGTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCC AACATCTAGATTTCTTGTATTTTGT CGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAA TGGTATTATGGTTTAACAGCTGCTACTG ATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAA AGTTGTCCACCAAC TGCA CATCGGAGGGACGGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCAATTCCCAATGCACC A GTG ]
[-] EMBL BM418741 [ ttttGAAACTATAATTTCTCAGGTGTCATGCTTATCAGATGTCCAGCACAAAGGGCATAAGCATAGTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCC AACATCTAGATTTCTTGTA TTTGT CGAACTTTAG TGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAA GGGTATTATGGTTTAACAGCTGCTACTG ATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAA AGTTGTCCACCAAC TGCA CATCGGAGGGA GGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACC A GTGCTATTAATAATTACGATCAATAAACAGGATGCATCC TGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTC AAC TGCTCTGATGTA TTA GCCTTTA TGC TGA CCGTCCAGTT ATT TG TGGTCAAACTCAACATGAACAG CACGTT ]
[-] EMBL BI811320 [ ttttttTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCC AACATCTAGATTTCTTGTA TTTGT CGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAA TGGTATTATGGTTTAACAGCTGCTACTG ATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAA AGTTGTCCACCAAC TGCA CATCGGAGGGA GGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACC A GTGCTATTAATAATTACGATCAATAAA AGGATGCATCC TGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTC AAC TGGTCTGATGTATTTAGGCCTTTA TGCGTGA CCGTCCAGGTTATT TG GGTC CACa ]
[-] EMBL AA751938 [ TTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCC AACATNTAGATTTCTTGTA TTTGT CGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAA AAGATGGTAATAACTTACAA TGGTATTATGGTTTAACAGCTGNTACTG ATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAA AGTTGTCCACCAAC TGCA CATCGGAGGGA GGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGNTGAGctc ]
[-] EMBL AU174591 [ tttttttTGATGGCCCTTGTTTTACCC AACATCTAGATTTCTTGTA TTTGT CGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAA TGGTATTATGGTTTAACAGCTGCTACTG ATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAA AGTTGTCCACCAAC TGCA CATCGGAGGGA GGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACCAA GTG ]
[-] EMBL BM419069 [ tttTTTTTTTACCCGAAGATCTAGATTTCTTGTA TTGT CGAACTTTAGTTG TTCATCGAAAGGGGCAACACAGAGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAA GGGTATTATGGTTTAACAGCTGCTACTGCATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAA AG TGTCCACCAACGTGCACCATCGGAGGGA GGGAAGCAAACATCAAATGGCAGCACAGCTACNCTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAANGCACC AGGTGCTATTAATAATTACGATCAATAAACAAGGTGCATCCGTGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTCAAACGTGGTCTGATGTA TTA G CTTTATTGN TGAC ]
[-] EMBL BQ906055 [ ttTTTTACCC AACATCTAGATTTCTTGTA TTGGTGCGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAANAAAAAAGATGGTAAGATGGTAATAACTTACAA TGGTATTATGGTTTAACAGCTGCTACTG ATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAAGAGTTGTCCACCAAC TGCA CATCGGAGGGA GGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACC A GTGCTATTAATAATTACGATCAATAAA AGGATGCATCC TGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTC AAC TGCTCTGATGTA TTA GCCTTTA TGC TGACCCGTCCAGTTAATTCNGTNGGTC AAATCAACATGAACAGCCACGTTTGAAGCTCTTCCCATAGAGAACTGGGAATCCCGGACGC ]
[-] EMBL CA998872 [ TAATAATTACGATCAATAAA AGGATGCATCC TGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTC AAC TGCTCTGATGTA TTA GCCTTTA TGC TGACCCGTCCAGTTAATT TGTTGGTC AAATCAACATGAACAGCCACGTTTGAAGCTCTTCCCATAGAGAACTGGGAATCCAACTTTGCAGCCATGCTCCATTCTTTATGCCATCTAACCAGGGATGCTCCCAAAATTGCAAGGTCTTGACCCATCAGATAGTCTTTCTCTCGCAGAGTTGCCTCCATATTCACTCCATATGCAGTATCACCTCTAATGGACACAGCACCAGTGTTTGCTAACAATGTTAATCTATCACCTACTGATAGCTTGTCTTCAAACTTCGCTCCGGTCGCCATAGTATCTCCCAAGAAAGTCATGGACAAACCTCCGGTAGTTGTGTTTTTCTTGGAGTTCTTGAATTTGCTCTCCCCTCTAAGAGTGTAAGCAAGCTGGTCCATTATGGTTTGGATGTCGAAGCCTGCAAGGCTTGAAACATTTTCCCTATGCTTAGCTGATATTGAGGACCACCAAATGAATGGT]
consensusID : consensus_14492#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 773 fasta sequence
[TTTTTTAACAGAAACTATAATTTCTCAGGTGTCATGCTTATCAGATGTCCAGCACAAAGGGCATAAGCATAGTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCTTTTTTTTTACCCAACATCTAGATTTCTTGT-ATTTGTCGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAA-AGATGGTAAGATGGTAATAACTTACAATGGTATTATGGTTTA-ACAGCTGCTACTGATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTG--CTCTTAAAGTTGTCCACCAACT-GCACATCGGAGGGAGGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTT-GACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACCTTGGAATGGAGGACTCCAAGAAAGGACAGAACCTTTACATGACCTTCCAAGAGAAATTCAGTTTTGAAATATAAATAACCAGTGCTATTAATAATTACGATCAATAAAAGGATGCATCCTGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTCAAC-TGCTCTGATGTATTAGCCTTTATGCTGACCCGTCCAGTTAATTTGTTGGTCAAATCAACATGAACAGCCACGCTTGAAGCTCTTCCCATAGAGAACTGGGAATCCAACTTTGCAGCCATGCTCCCCCCTTGTCGTCC]
[-] EMBL BI807451 [TTTTTTAACAGAAACTATAATTTCTCAGGTGTCATGCTTATCAGATGTCCAGCACAAAGGGCATAAGCATAGTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCCAACATCTAGATTTCTTGT ATTTGTCGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAA AGATGGTAAGATGGTAATAACTTACAAGGGTATTATGGTTTA ACAGCTGCTACTGATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTG CTCTTAAAGTTGTCCACCAACT GCACATCGGAGGGAGGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTT GACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACCTTGGAATGGAGGACTCCAAGA ]
[+] EMBL CA759171 [ ttTTTTTTTTTACCCAACATCTAGATTTCTTGT ATTTGTCGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAA AGATGGTAAGATGGTAATAACTTACAATGGTATTATGGTTTA ACAGCTGCTACTGATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTG CTCTTAAAGTTGTCCACCAACT GCACATCGGAGGGAGGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTT GACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACCTTGGAATGGAGGACTCCAAGAAAGGACAGAACCTTTACATGACCTTCCAAGAGAAATTCAGTTTTGAAATATAAATAACCAGTGCTATTAATAATTACGATCAATAAAAGGATGCATCCTGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTCAAC TGCTCTGATGTATTAGCCTTTATGCTGACCCGTCCAGTTAATTTGTTGGTCAAATCAACATGAACAGCCACGCTTGAAGCTCTTCCCATAGAGAACTGGGAATCCAACTTTGCAGCCATGCTCCCCCCTTGTCGTCC]
[-] EMBL BQ909182 [ TTTTTTTTTACCCAACATCTAGATTTCTGGTNGTTTGTCGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAA AGATGGTAAGATGGTAATAACTTACAATGGTATTATGGTTTA ACAGCTGCTACTGATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTG CTCTTAAAGTTGTCCACCAACT GCACATCGGAGGGAGGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTT GACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCCTGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACCTTGGAATGGAGGACTCCAAGAAAGGACAGAACCTTTACATGACCTTCCAAGAGAAATTCAGTTTTGAAATATAAATAACCAGTGCTATTAATAATTACGATCAATAAAAGGATGCATCCTGTTCCATAAATACATTGTCATTGAACAGACACCTAATAGGGCAATCTTCAACGTGGTCTGATGTATTAGCCTTTATGCTGACCCGTCC ]
[-] EMBL BM419814 [ TTTTTTTTTACCCAACATCTAGATTTCTTGT ATTTGTCGAACTTTAGTTGCTTCATCGAAAGGGGCAACACAGAGAAAAAAAACNGATGGTAAGATGGTAATAACTTACAA GGTATTATGGTTTACACAGCTGCTACTGATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGGNGTCTTAAAGTTGTCCACCAACTGGCACATCGGAGGGAGGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGTCTTGATTCTTGGACTGAAAGTGATGGTTCcgg ]
consensusID : consensus_14492#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 634 fasta sequence
[CGGGGGATGCNCCCAAAATNGCAAGTTCTGGACCCATCAGATAGTNTTTNTTTGGCAGAGTTGCNTCCATATTCATTCCATANGCNGTATCACTTNTAAGGACACAGCACCAGTGTTTGCTAACAATGTTAATCTATCACNNACTGATAGTTGTNTTCAAANTTCGCTCCGGTCACCATAGTATCTCCCAAGAAAGTCATGGACAAACCTCCGGTAGTTGTGTTTTTNTNGGAGTTCTGGAATTTGCTCTCCCNNNNAAGAGTGTAAGCAAGNTGGTCCATTATGGTTTGGATGTCGAAGCCTGCAAGGCTTGAAACATTTTCCCTATGCTTAGCTGATATTGAGGACACCAAATGAATGGTGGATTCTCTCTTGTCCTTGTTAACTTGGACCCACAGAGAAGCTGGAAACGCATTGGCAGCATCAAGGCTATATTGAAGGCTCACACCATCAAACCCACAATCATGATCCCATCCATCAGGGTTGGTAATAGCACGCACCAGAAAGTTTGGCTTAGGGTCAAGGCACCGATAACGGTATGCTGGATCATCAGAGTCAAACGAAGATGGCAAGGCCCAATCTGGCATGACAGATCTTTCTGTCTCATATTCATCATCAGGATTATCATTGTCCC]
[-] EMBL BE229841 [CGGGGGATGCNCCCAAAATNGCAAGTTCTGGACCCATCAGATAGTNTTTNTTTGGCAGAGTTGCNTCCATATTCATTCCATANGCNGTATCACTTNTAAGGACACAGCACCAGTGTTTGCTAACAATGTTAATCTATCACNNACTGATAGTTGTNTTCAAANTTCGCTCCGGTCACCATAGTATCTCCCAAGAAAGTCATGGACAAACCTCCGGTAGTTGTGTTTTTNTNGGAGTTCTGGAATTTGCTCTCCCNNNNAAGAGTGTAAGCAAGNTGGTCCATTATGGTTTGGATGTCGAAGCCTGCAAGGCTTGAAACATTTTCCCTATGCTTAGCTGATATTGAGGACACCAAATGAATGGTGGATTCTCTCTTGTCCTTGTTAACTTGGACCCACAGAGAAGCTGGAAACGCATTGGCAGCATCAAGGCTATATTGAAGGCTCACACCATCAAACCCACAATCATGATCCCATCCATCAGGGTTGGTAATAGCACGCACCAGAAAGTTTGGCTTAGGGTCAAGGCACCGATAACGGTATGCTGGATCATCAGAGTCAAACGAAGATGGCAAGGCCCAATCTGGCATGACAGATCTTTCTGTCTCATATTCATCATCAGGATTATCATTGTCCC]
consensusID : consensus_14492#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 389 fasta sequence
[TTTTTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCCAACATCTAGATTTCTTGTATTTGTCGAACTTTAGTTGCTTCCATCCGCAACAGGGGCCAACCACCAGCAGCAACACAACACAACAGCATGGTCAAGCATGGTCACATTACACTTACAATGGTCATTCATGGTTTCACACCAGCCTGCTCACCGTGATCCACAAGTTTCTCCCAACACACCAAGCAGCTTCAGACATCTTTCCATTCCGTGCCNTCTTCTCAACAGGTGTGTGTCCCCCACCCCCACACGGTGGCCACCATCGGGGCAGAGGGCAGAGGCACAGGCCCACACACGCAATCAAACAGTGGGCCACAGGCCCACCAGCG]
[-] EMBL BQ907895 [TTTTTAGTTCAAAAAGTTTACCAACCATTGACATAGCACAATATGATGGCCCTTGTTTTACCCAACATCTAGATTTCTTGTATTTGTCGAACTTTAGTTGCTTCCATCCGCAACAGGGGCCAACCACCAGCAGCAACACAACACAACAGCATGGTCAAGCATGGTCACATTACACTTACAATGGTCATTCATGGTTTCACACCAGCCTGCTCACCGTGATCCACAAGTTTCTCCCAACACACCAAGCAGCTTCAGACATCTTTCCATTCCGTGCCNTCTTCTCAACAGGTGTGTGTCCCCCACCCCCACACGGTGGCCACCATCGGGGCAGAGGGCAGAGGCACAGGCCCACACACGCAATCAAACAGTGGGCCACAGGCCCACCAGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14492#0 CTTTTTTTTTTTTTTGGGCACAACCGATGTGATAGGCTTTCCATTTCAGTGTGTAGATCA 60
consensus_14492#1 ------------------------------------------------------------
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------------------------------------------------------
consensus_14492#0 GGACAACATATATATTGTCTAACACAAGGCAACAACTAACAGAAACTATAATTTCTCAGG 120
consensus_14492#1 -------------------------------TTTTTTAACAGAAACTATAATTTCTCAGG 29
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 -----------------------------------CGGGGGATGCNCCCAAAATNGCAAG 25
consensus_14492#0 TGTCATGCTTATCAGATGTCCAGCACA----AAGGGCATAAGCATAGTAGTTCAAAAAGT 176
consensus_14492#1 TGTCATGCTTATCAGATGTCCAGCACA----AAGGGCATAAGCATAGTAGTTCAAAAAGT 85
consensus_14492#3 -------------------------------------------TTTTTAGTTCAAAAAGT 17
consensus_14492#2 TTCTGGACCCATCAGATAGTNTTTNTTTGGCAGAGTTGCNTCCATATTCATTCCATANGC 85
* * *** * * *
consensus_14492#0 T-TACCAACCATT--GACATAGCACAATATGATGGCC--CTTGTTTTACCCAACATCTAG 231
consensus_14492#1 T-TACCAACCATT--GACATAGCACAATATGATGGCT--TTTTTTTTACCCAACATCTAG 140
consensus_14492#3 T-TACCAACCATT--GACATAGCACAATATGATGGCC--CTTGTTTTACCCAACATCTAG 72
consensus_14492#2 NGTATCACTTNTAAGGACACAGCACCA-GTGTTTGCTAACAATGTTAATCTATCACNNAC 144
** ** * **** ***** * ** * ** ** * * * ** *
consensus_14492#0 -ATTTCTTGTATTTG--TCGAACTTTAGTTGCTTC---ATC---GAAAGGGGCAACACAG 282
consensus_14492#1 -ATTTCTTGTATTTG--TCGAACTTTAGTTGCTTC---ATC---GAAAGGGGCAACACAG 191
consensus_14492#3 -ATTTCTTGTATTTG--TCGAACTTTAGTTGCTTCC--ATCCGCAACAGGGGCCAACCAC 127
consensus_14492#2 TGATAGTTGTNTTCAAANTTCGCTCCGGTCACCATAGTATCTCCCAAGAAAGTCATGGAC 204
* **** ** ** ** * *** * * * *
consensus_14492#0 AGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAATGGTATTATGGTTTAACAGCTGC 342
consensus_14492#1 AGAAAAAAAAAGATGGTAAGATGGTAATAACTTACAATGGTATTATGGTTTAACAGCTGC 251
consensus_14492#3 CAGCAGCAACACAACACAACAGCATGGTCAAGCATGGTCACATTACACTT--ACAATGGT 185
consensus_14492#2 AAACCTCCGGTAGTTGTGTTTTTNTNGGAGTTCTGGAATTTGCTCTCCCNNNNAAGAGTG 264
* * *
consensus_14492#0 TACTGATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAAAGTTGTCCA 402
consensus_14492#1 TACTGATCACAAGTTTCTCCAAAACAAGAGTAGATCTTCTTCTGCTCTTAAAGTTGTCCA 311
consensus_14492#3 CATTCAT----GGTTTCAC----ACCAGCCTG---CTCACCGTGATCCACAAGTTTCTCC 234
consensus_14492#2 TAAGCAAGNTGGTCCATTATGGTTTGGATGTCGAAGCCTGCAAGGCTTGAAACATTTTCC 324
* * * * ** * *
consensus_14492#0 CCAACTGCACATCGGAGGGAGGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGT-- 460
consensus_14492#1 CCAACTGCACATCGGAGGGAGGGAAGCAAACATCAAATGGCAGCACAGCTACACTTGT-- 369
consensus_14492#3 CAACACACCAAGCAGCTTCAGACATCTTTCCATTCCGTGCCNTCTTCTCAACAGGTGT-- 292
consensus_14492#2 CTATGCTTAGCTGATATTGAGGACACCAAATGAATGGTGGATTCTCTCTTGTCCTTGTTA 384
* * ** ** * ***
consensus_14492#0 -CTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCC 519
consensus_14492#1 -CTTGATTCTTGACTGAAAGTGATGGTTCAACTTATATCCCTAGCTGAGTAGTAGGAGCC 428
consensus_14492#3 -GT-GTCCCCCACCCCCACACGGTGGC-CACCATCGGGGCAGAGGGCAGAGGCACAGGCC 349
consensus_14492#2 ACTTGGACCCACAGAGAAGCTGGAAACGCATTGGCAGCATCAAGGCTA-TATTGAAGGCT 443
* * * * * ** ** * **
consensus_14492#0 TGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACC------------------------ 555
consensus_14492#1 TGAACTCTGAAGCTTCCGAGCACTTCCCAACGCACCTTGGAATGGAGGACTCCAAGAAAG 488
consensus_14492#3 CACACACGCAATCAAACAGTGGGCCACAGGCCCACCAGCG-------------------- 389
consensus_14492#2 CACACCATCAAACCCACAATCATGATCCCATCCATCAGGGTTGGTAATA----------- 492
** ** * * * ** *
consensus_14492#0 --------------------------------------------------------AGTG 559
consensus_14492#1 GACAGAACCTTTACATGACCTTCCAAGAGAAATTCAGTTTTGAAATATAAATAACCAGTG 548
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------GCACGCACCAGAAAGTTTGGCTTAGGGTCAAGGCACCGATAAC-GGTA 539
consensus_14492#0 CTATTAATAATTACGATCAATAAAAGGATGCAT--CCTGTTCCATAAATACATTGTCATT 617
consensus_14492#1 CTATTAATAATTACGATCAATAAAAGGATGCAT--CCTGTTCCATAAATACATTGTCATT 606
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 TGCTGGATCATCAGAGTCAAACGAAGATGGCAAGGCCCAATCTGGCATGACAGATCTTTC 599
consensus_14492#0 GAACAGACACCTAATAGGGCAATCTTCAACTGCTCTGATGTATTAGCCTTTATGCTGACC 677
consensus_14492#1 GAACAGACACCTAATAGGGCAATCTTCAACTGCTCTGATGTATTAGCCTTTATGCTGACC 666
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 TGTCTCATATTCATCATCAGGATTATCATTGTCCC------------------------- 634
consensus_14492#0 CGTCCAGTTAATTTGTTGGTCAACTCAACATGAACAGCCACGTTTGAAGCTCTTCCCATA 737
consensus_14492#1 CGTCCAGTTAATTTGTTGGTCAAATCAACATGAACAGCCACGCTTGAAGCTCTTCCCATA 726
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------------------------------------------------------
consensus_14492#0 GAGAACTGGGAATCCCGGACGCCAGCCATGCTCCATTCTTTATGCCATCTAACCAGGGAT 797
consensus_14492#1 GAGAACTGGGAATCCAACTTTGCAGCCATGCTCCCCCCTTGTCGTCC------------- 773
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------------------------------------------------------
consensus_14492#0 GCTCCCAAAATTGCAAGGTCTTGACCCATCAGATAGTCTTTCTCTCGCAGAGTTGCCTCC 857
consensus_14492#1 ------------------------------------------------------------
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------------------------------------------------------
consensus_14492#0 ATATTCACTCCATATGCAGTATCACCTCTAATGGACACAGCACCAGTGTTTGCTAACAAT 917
consensus_14492#1 ------------------------------------------------------------
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------------------------------------------------------
consensus_14492#0 GTTAATCTATCACCTACTGATAGCTTGTCTTCAAACTTCGCTCCGGTCGCCATAGTATCT 977
consensus_14492#1 ------------------------------------------------------------
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------------------------------------------------------
consensus_14492#0 CCCAAGAAAGTCATGGACAAACCTCCGGTAGTTGTGTTTTTCTTGGAGTTCTTGAATTTG 1037
consensus_14492#1 ------------------------------------------------------------
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------------------------------------------------------
consensus_14492#0 CTCTCCCCTCTAAGAGTGTAAGCAAGCTGGTCCATTATGGTTTGGATGTCGAAGCCTGCA 1097
consensus_14492#1 ------------------------------------------------------------
consensus_14492#3 ------------------------------------------------------------
consensus_14492#2 ------------------------------------------------------------
consensus_14492#0 AGGCTTGAAACATTTTCCCTATGCTTAGCTGATATTGAGGACCACCAAATGAATGGT 1154
consensus_14492#1 ---------------------------------------------------------
consensus_14492#3 ---------------------------------------------------------
consensus_14492#2 ---------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||