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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14502#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 636 fasta sequence
[GCTCACCTCCGTCATTTGCCGCACTCGTCCAAGCTTACTTCGCCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT-TGGCTACCTGTCCCGCGAAGAAAT-GTTGGC-GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT-GT-CGGAGGTCACCGGCATCAA-GGTC-GGCG-ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGACCGTCAGGGCCGTGCGGGTCTGGCTGCGGCGGAATCCGCAGC]
[+] EMBL CF339602 [GCTCACCTCCGTCATTTGCCGCACTCGTCCAAGCTTACTTCGCCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGTC GGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGT ]
[+] EMBL CF339753 [ tACCTCCGTGATTTGCCG ACTCGTCC AGCTTACTTCGCCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGTC GGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGACCGTCAGGGCCGTGCGGGTCTGGCTGCGGCGGAATCCGCAGC]
[+] EMBL CF339579 [ TTGCCGCACTCGTCCAAGCTTACTTCGCCGAGTACCTGACCC GCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGTGGT CGGAGGTCACCGGCATCAAGGGTC GGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGACC ]
[+] EMBL CF338489 [ TTGCCGCACTCGTCCAAGCTTACTTCGCCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGCGGGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTA ]
[+] EMBL CF338398 [ TCGTCCAAGCTTACTTCGCCGAGTACCTGACTCA CAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAAGGGTC GGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGACC ]
[+] EMBL CF339031 [ TCGTCCAAGCTTACTTCGCCGAGTACCTGA CCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGTC GGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGACC ]
[+] EMBL CF339519 [ TCGTCCAAGCTTACTTCGCCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGTCGGGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGA ]
[+] EMBL CF338410 [ TCGTCCAAGCTTACTTCGCCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGNGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GTCCGGAGGTCACCGGCATCAA GGTCGGGCGAATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGC ACGCAGCGTTCCCcgt ]
[+] EMBL CF338728 [ TCGTCCAAGCTTACTTCGCCGAGTACCTGTCCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGTCNGGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGT ]
[+] EMBL CF338702 [ TCGTCCAAGCTTACTTCGCCGAGTACCTGATCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAATGGTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GTCCGGAGGTCACCGGCATCAA GGTCGGGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCAT ]
[+] EMBL CF339268 [ TCGTCCAAGCTTACTTCGCCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GG ]
[+] EMBL CF339346 [ TCGTCCAAGCTTACTTCGCCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGTC GGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGACC ]
[+] EMBL CF338678 [ CGTCC AGCTTACTTCGCCGAGTACCTGACTTA CAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGTGGT CGGAGGTCACCGGCATCAA GGTCGGGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCAT ]
[+] EMBL CF338517 [ CCGAGTACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGNGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GTCCGGAGGTCACCGGCATCAA GGTCGGGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGACC ]
[+] EMBL CF338960 [ TACCTGACCCAGCAACGCGCCCTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGTC GGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGC ]
[+] EMBL CF338926 [ CTCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTCGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAGAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAAGTTCGTTGCCCATCGGGATGTGACGTCGTTGCAAGTAATTGAGAGCGCCCTGGGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCT TGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTCCTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGTC GGCG ATGTCGTGCTCGATGCGGGCGCAGCCTGCGTTCATCTGCATGGCAAAGGCCGCAAGCAACGCAGCGTTCCCGTGTGGCGCTCGACC ]
[+] EMBL CF338655 [ TCAGCGCGCAGACCATCGCCACCTACCGGGATGCCTTCGTGTTGTTCCTCGGCTTTGCCGAATCCCGACTGGGCAAGTGGCCGGCCACCATCCTGCTGGGGGACATCACACCGGCGTTGATCATGGCCTTCCTCGATCACCTGGAACGAAAGCGGCACAACTGCGTGCGCAGCCGAAACGCCCGCCTGGCGGCCTTGCGCTCGTTCCTGAACTTCGATGCCCATCGCGATGTGACGTCATTGCAAGTAATTGACAGCGCCCTGAGCGTGCCGGTGAAACGCTTTGAGCAACCGATGCTATGGCTACCTGTCCCGCGAAGAAAT GTTGGC GGTGATTGGCACACCGGACGAAACCTGGCTGAGTCAGCGGGACCATGTACTGTTACTGCTGCTCTACAACACCGGGGCACGGGT GT CGGAGGTCACCGGCATCAA GGGC TGCG ATGTCGTGCTCGATGCAGGCGCATCCTGCGTTCATCTGCATGGCAAAGGCCGTAAGCAACGCAACGTTGCCGTGTGGC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||