These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14503#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1921 fasta sequence [CGATTCCCTCCCCTCCACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA-CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT-CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA-TAAC-GGTGTTCTCTGCTCCCAATTATTGCGACC-AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC-TAAAACCAA-ATATTTCCTC-TTTC-TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTGGAGAACTGAAAATCA-TTCGAGGTACTAGCAAACTAGAAAGTTGCATCAAAAAACTTAAAAGG] [+] EMBL AK101918 [CGATTCCCTCCCCTCCACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTG ] [+] EMBL AK102966 [ ATTCCCTCCCCTCCACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATG ] [+] EMBL CB677609 [ ACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAA ] [+] EMBL CB635252 [ ACCGACCCTTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCCTGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGCGCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGCACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAA ] [+] EMBL CB673227 [ AAGGGAAACTATCATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAATGATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAGCTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAGGAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCAAAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCC ] [+] EMBL CF322745 [ ACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGT ATTTTACGGTTTGGGNTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGA ] [+] EMBL CF323142 [ ACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTGAAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTGAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTACCGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAA ] [+] EMBL AK111940 [ GAAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGATGAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAAATGTGACTAAGAAATTTCTACAGGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATA TTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCA ] [+] EMBL AA752994 [ GACTACCGTATCATAGAA TAGAGCCACAATATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTGGATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTA CGCCTACCAGATTGTGTTACAAACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCNATATATTTAAGCTCAATGGGCTTCCCTCGGAAGANAATCCTTACCTCTTCAATGGAGACTTTGTNGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTNCCTTGCNAGANGAAACCNTGAGAGCNAGANCATGAATAAGATATATGGTTTTGANGGAGAAGTNAGGTCNAANTTGGGANAANCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAAGTCTCTTTANTGTTGANGGTGTTAAGCTTTCNGATATTAGANCCNTCGATCGAATCCNTGAGCCTCC ] [-] EMBL CB635253 [ ACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCGGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATGGTTCTATATACTGCCATGGCACTCTGTTACAAaaaaaaag ] [-] EMBL CB673228 [ GCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTT TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTGGAGAACTGAAAATCA TTCAAGGTACTAGCAAACTAGAAAGTTGCATCAAAAAACTTAAAAGG] [+] EMBL CA765318 [ aggggGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGAT CCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTA TAAC GGTGTTCTCTGCTCCCAATTATTGCGACC AGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATA TTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTGGAGAACTGAAAATCATTTCGTGTTACTAGCAAACTAGAAAGGTGCATCAc ] [+] EMBL BM421807 [ gaCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCACCCTCAACTTGGTAGAGGTCCAAGCAAAC CGGTGTTGGTCTTTCGTTTGGT CAGATGTGACTAAGAAATTTCTACAAGAAAATAATCTGGACCTTGTTGTTCGATCCCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTANTAACGGGTGTTCTCTGCTCCCCATTATTGCGACCAAGATGGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAACNTAAAACCAANAGTTGTCCTCGTTTCGTCACCGGTGCCACACCCNGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGT AC ACATATATCCATATCC CCTTCTTTC CCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAAT CCATTTTTCTAaaaaaaaaa ] [+] EMBL CB678954 [ AGAAC TAAAACCAA ATATTTCCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGTGTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTGGAGAACTGAAAATCA TTCG ] [+] EMBL BM929236 [ CCTC TTTC TCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAGGATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATA TTTTTTTTTGTGACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATAC ] consensusID : consensus_14503#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 622 fasta sequence [CGCTTTATTAGCGTGGTCGCCCCCCGAGGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTCTACAAGAAAATAATCTGGCCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTATAACCGGAGTCTCTGTTCCAATATTGGGCCAGATGGTACCAAGGTGCTTCATTCGGTTCACAGCTCCACACTAAACCAAATATTCCTTTTTTCACGGTGCCCACCCTGCCGTAAAGCCGATGGCCTACGCGACAACTTCCTCAGGATGTTCCAGTACCAC] [+] EMBL BU572355 [CGCTTTATTAGCGTGGTCGCCCCCCGAGGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAGAGGCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTCTACAAGAAAATAATCTGGCCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGAAATTGAACATGATGGAAAGCTTATAACCGGAGTCTCTGTTCCAATATTGGGCCAGATGGTACCAAGGTGCTTCATTCGGTTCACAGCTCCACACTAAACCAAATATTCCTTTTTTCACGGTGCCCACCCTGCCGTAAAGCCGATGGCCTACGCGACAACTTCCTCAGGATGTTCCAGTACCAC] consensusID : consensus_14503#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 503 fasta sequence [CCTGACTGGACTGAAGGAGTAGAAATACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTCACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTG] [+] EMBL CF312604 [CCTGACTGGACTGAAGGAGTAGAAATACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGTCATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAGCTCAATGGGCTTCCCTCGGAAGAGAATCCTCACCTCTTCAATGGAGACTTTGTAGACAGAGGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTTCAAGTGCCTCTATCCGACAGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTTTGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATTCTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCTCTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCCTCCTGAAGAAGGTCTAATGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14503#0 CGATTCCCTCCCCTCCACCGACTCCTCCGCCGTCTCCTCCACGCCGCCACCCTCGCCCCC 60 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 TGCGCTTCCGCCGCCGCGCGGTGGGCCACCCCGCCCTCCATCGCCGGCGGGCCACCCCGC 120 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GCTTCGTTGGTTCGGGCCGCGCCACGACGCTGCCTCGGCTCCCTTCTCCCTCCAGGCTGC 180 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 ACGACTTGAAATTCTGTGTATGAAGTAGCATTTACTGGAGAAAGCTCAAGGGAAACTATC 240 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 ATGGATGCCAACTCCAGTTTAAATGAGCAAAAGTCTGAAGAACTCAAGCTTAAAGCAAAT 300 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GATGCCTTTAAAGCAAACAAGTTCTCCCTGGCTATAGAGCTCTATAGTCAAGCCATTGAG 360 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 CTAAACAGTTCAAATGCAGTTTACTGGGCAAACCGTGCATTTGCTCATACAAAGTTAGAG 420 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GAATATGGAAGTGCAGTGCAAGATGCTTCAAAAGCAATTGAAATTGATGCTAGATACTCA 480 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 AAAGGTTACTACCGACGTGGAGCGGCATATCTTGCCATGGGTAAGTTCAAGGAAGCTCTG 540 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 AAGGATTTTCAACAGGTGAAAAGAATCAGCCCTAATGATCCAGATGCTACTAGGAAATTG 600 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 AAAGAGTGTGAGAAAGCTGTCCAGAAAATCCGTTTTGAAGAGGCAATTTCTGTAGGGGAT 660 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GAAGAGAAGCGCTCTGTAGCTGATTCTATTGACTACCGTATCATAGAAGTAGAGCCACAA 720 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 TATACAGGACCAAGAGTTGATGGAGACACAATAACATTAGATTTTGTCAAGGCTATGTTG 780 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GATGAGTTTGAGAAACAGAAATGCATACACAAAAGGTACGCCTACCAGATTGTGTTACAA 840 consensus_14503#2 --------------------------------------------------------CCTG 4 consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 ACCGTGCAGCTATTGCGTTCTGTACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGT 900 consensus_14503#2 ACTGGACTGAAGGAGTAGAA-ATACCTTCGCTTGTTGATGTGAACGTTCCTGATGGAAGT 63 consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 CATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAG 960 consensus_14503#2 CATTTTACGGTTTGTGGTGATGTGCATGGTCAGTATTTTGACTTGCTCAATATATTTAAG 123 consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 CTCAATGGGCTTCCCTCGGAAGAGAATCCTTACCTCTTCAATGGAGACTTTGTAGACAGA 1020 consensus_14503#2 CTCAATGGGCTTCCCTCGGAAGAGAATCCTCACCTCTTCAATGGAGACTTTGTAGACAGA 183 consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTT-CAAGTGCCTCTATCCGAC 1079 consensus_14503#2 GGATCTTTTTCTGTTGAAGTCATACTCACTCTTTTTGCTTT-CAAGTGCCTCTATCCGAC 242 consensus_14503#1 -----------------------------------CGCTTTATTAGCGTGGTCGCCCCCC 25 ***** ** * ** * consensus_14503#0 AGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTT 1139 consensus_14503#2 AGGTATGTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTT 302 consensus_14503#1 GAG---GTACCTTGCAAGAGGAAACCATGAGAGCAAGAGCATGAATAAGATATATGGTTT 82 * ****************************************************** consensus_14503#0 TGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATT 1199 consensus_14503#2 TGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATT 362 consensus_14503#1 TGAGGGAGAAGTGAGGTCGAAGTTGGGAGAAGCATTTATTGAACTATTTGCGGAAGCATT 142 ************************************************************ consensus_14503#0 CTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCT 1259 consensus_14503#2 CTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCT 422 consensus_14503#1 CTGTTGCCTACCCCTTGCTCATGTCATCAACAACAAGGTCTTTGTTGTTCATGGAGGTCT 202 ************************************************************ consensus_14503#0 CTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCC 1319 consensus_14503#2 CTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCC 482 consensus_14503#1 CTTTAGTGTTGATGGTGTTAAGCTTTCAGATATTAGAGCCATCGATCGATTCCGTGAGCC 262 ************************************************************ consensus_14503#0 TCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAG 1379 consensus_14503#2 TCCTGAAGAAGGTCTAATGTG--------------------------------------- 503 consensus_14503#1 TCCTGAAGAAGGTCTAATGTGTGAAGTATTATGGAGTGATCCTCAGCCTCAACTTGGTAG 322 ********************* consensus_14503#0 AGGTCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTTCT 1439 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 AGGCCAAGCAAACGCGGTGTTGGTCTTTCGTTTGGTGCAGATGTGACTAAGAAATTCTAC 382 consensus_14503#0 ACAAGAAAATAATCTGGACCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGA 1499 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 AAGAAAATAATCTGGCCTTGTTGTTCGATCCCATGAAGTGAAAGATGAAGGCTATGAAAT 442 consensus_14503#0 AATTGAACATGATGGAAAGCTTATAACGGTGTTCTCTGCTCCCAATTATTGCGACCAGAT 1559 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 TGAACATGATGGAAAGCTTATAACCGGAGTCTCTGTTCCAATATTGGGCCAGATGGTACC 502 consensus_14503#0 GGGTAACAAGGGTGCATACATTCGGTTCACAGCTCCAGAACTAAAACCAAATATTTCCTC 1619 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 AAGGTGCTTCATTCGGTTCACAGCTCCACACTAAACCAAATATTCCTTTTTTCACGGTGC 562 consensus_14503#0 TTTCTCAGCGGTGCCACACCCTGACGTCAAGCCGATGGCCTACGCGAACAACTTCCTCAG 1679 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 CCACCCTGCCGTAAAGCCGATGGCCTACGCGACAACTTCCTCAGGATGTTCCAGTACCAC 622 consensus_14503#0 GATGTTCCAGTAACAACATATATCCATATCCGCCTTCTTTCGCCATATTTTTTTTTTGTG 1739 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 ACGAGGCTGAAGCCTAAAAAGCTTGCTAGCATACGATGTTTGTACAACAGATCTGGTGGT 1799 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GTAAGCAGGAATGCAATTTTTCTATATACTGCCATGGCACTCTGTTACAATTTTTTTGTG 1859 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GAGAACTGAAAATCATTCGAGGTACTAGCAAACTAGAAAGTTGCATCAAAAAACTTAAAA 1919 consensus_14503#2 ------------------------------------------------------------ consensus_14503#1 ------------------------------------------------------------ consensus_14503#0 GG 1921 consensus_14503#2 -- consensus_14503#1 -- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||