These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14515#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1568 fasta sequence [ATTGAACGCGCTTGGAAAGGTTGACCCCAATAAGCTTATGCATGTAACAACAATGGACCGATATGTAAGATACCATGTGAAGGAATTTGAACGGAGCTTCTTGATCAAGTTCCCAGCATGCTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGTGGGTTTGAAAAATTTCAGCAAAACTGCACGTGAATTAATTGTCCGATTGCAAAAAATTGATAATGATAACTACCCAGAGACCCTATATCAAATGTTTATTGTCAATGCTGGTCCGGGGTTTCGGCTCTTATGGAACACTGTGAAGTCCTTTCTGGACCCAAAAACCACTTCCAAGATACATGTACTCGGGAACAAATATCAAAGCAAGCTGCTAGAAGTAA-TTGATGCTAGTGAATTGCCGGAATTCCTTGGTGGCGCTTGTACCTGTCCTGAATATGGAGGGTGTCTTAAAGCTGAAAAAGGACCATGGAAGGACCAAAACATACTCAATATAGTCCTTAGTGGCGAGGCTCAGTGTGCTCGACAAATTGTAACTGTTTCCAATGGAGAGGAAAAGATAATTTCTTATGCCAAGTCCAAGCACCACACAATACGAGGGAGCGATACATCCACTGCTGAGTCTGGATCTGAGGCTGAAGATGTTACGTCTCCAAAAGTACTGAGAAGTTACATCTCCCATCCTAAGTTGACCCCTGTCCGTGAAGAGGTCAAGATGGTTAGAGCCACGAGCTTTTCTACTCGCATGCCTGAATACGATGTTCCTGTCGTCGATAAGGCTGTAGATGCAACATGGAAGAGAGAAGTGACTCGAAAGACTGCCTTCTCATCCAAAGACTCTTCTTTGACAAGCACAGAAAGTTCATCCAATGGCTCTTTGGACCGGATCGTTGCAGTTTTGCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAA-CTATTTTCGTCAGTCT-T-GCAAAGG-CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT-CAAGATAAGCCTTCAGA-GATGCCCTGCGAGAAAGAAGAG-TTGCTTAATGCTGCTGTCC-GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA-GGAACTACTA-GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC-AGAAAAAGAAGAAGGC-GATGT-TTTGCTATTAGCA-CCAGCC-AA-CCAGGAGAGGGTACACC-CCCTATCTTGGGATTATACTTTCTGAC-AGC-CAAAGACGGC-GTTTGAGAA-TTGAGATGTTGTAATCGGCAGC-CCC-CC-CTGCTCGCTT-CC-CTGGTTCTCC-TGTAAAATGTGAAACGACAGACGTCGGATGTAAATCG-GCAAAATTCTGACATAAATAAA-TGTGTTTTTTTGC----A---AAAAAAAAAAAGA] [+] EMBL CB630329 [ATTGAACGCGCTTGGAAAGGTTGACCCCAATAAGCTTATGCATGTAACAACAATGGACCGATATGTAAGATACCATGTGAAGGAATTTGAACGGAGCTTCTTGATCAAGTTCCCAGCATGCTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGTGGGTTTGAAAAATTTCAGCAAAACTGCACGTGAATTAATTGTCCGATTGCAAAAAATTGATAATGATAACTACCCAGAGACCCTATATCAAATGTTTATTGTCAATGCTGGTCCGGGGTTTCGGCTCTTATGGAACACTGTGAAGTCCTTTCTGGACCCAAAAACCACTTCCAAGATACATGTACTCGGGAACAAATATCAAAGCAAGCTGCTAGAAGTAA TTGATGCTAGTGAATTGCCGGAATTCCTTGGTGGCGCTTGTACCTGTCCTGAATATGGAGGGTGTCTTAAAGCTGAAAAAGGACCATGGAAGGACCAAAACATACTCAATATAGTCCTTAGTGGCGAGGCTCAGTGTGCTCGACAAATTGTAACTGTTTCCAATGGAGAGGAAAAGATAATTTCTTATGCCAAGTCCAAGCACCACACAATACGAGGGAGCGATACATCCACTGCTGAGTCTGGATCTGAGGCTGAAGATGTTACGTCTCCAAAAGTACTGAGAAGTTACATCTCCCATCCTAAGTTGACCCCTGTCCGTGAAGAGGTCAAGATGGTTAGAGCCACGAGCTTTTCTACTCGCATGCCTGAATACGATGTTCCTGTCGTCGATAAGGCTGTAG ] [+] EMBL CB630368 [ATTGAAAG GCTTGGAAAGGTTGACCCCAATAAACTTATGCATGTAACAACAATGGACCGATATGTAAGATACCATGTGAAGGAATTTGAACGGAGCTTCTTGATCAAGTTCCCATCATGCTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGTGGGTTTGAAAAATTTCAGCAAAACTGCACGGGAATTAATTGACCGATTGCAAAAAATTGATAATGATAACTACCCACAGACCCTATATCAAATGTTTATTGTCAATGCTGGGCCGGGGTTTCGGCTCTTATGGAACACTGTGAAGTCCTTTCTGGACCCAAAAACCACTTCCAAGATACATGTACTCGGGAACAAATATCAAAGCAAGCTGCTAGAAGTAA TTGATGCTAGTGAATTGCCGGAATTCCTTGGTGGCGCTTGTACCTGTCCTGAATATGGAGGGTGTCTTAAAGCTGAAAAAGGACCATGGAAGGACCAAAACATACTCAATATAGTCCTTAGTGGCGAGGCTCAGTGTGCTCGACAAATTGTAACTGTTTCCAATGGAGAGGAAAAGATAATTTCTTATGCCAAGTCCAAGCACCACACAATACGAGGGAGCGATACATCCACTGCTGAGTCTGGATCTGAGGCTGAAGATGTTACGTCTCCAAAAGTACTGAGAAGTTACATCTCCCATCCTAAGTTGACCCCTGTCCGTGAATAGGTCAAGATGGTTAGAGCCA ] [+] EMBL C26562 [ CCCCAATAAGCTTATGCATGTAACAACAATGGACCGATATGTAAGATACCATGTGAAGGAATTTGAACGGAGCTTCTTGATCAAGTTCCCAGCATGCTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGTGGGTTTGAAAAATTTCAGCAAAACTGCACGTGAATTAATTGTCCGATTGCAAAAAATTGATAATGATAACTACCCAGAGACCCTATATCAAATGTTTATTGTCAATGCTGGTCCGGGGTTTCGGCTCTTATGGGACACTGTGAAGTCCTTTCTGGNCCCAAAAACCACTTCCAAGNTACATGTACTCGGGGACAAATATCAAAGCAAGCTGCTAGGAGTAATTTGNTGCTAGTGAATTGC ] [+] EMBL CB645368 [ ACCACGTGAAGGAATTTGAACGGAGCTTCTTGATCAAGTTCCCAGCATGCTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGTGGGTTTGAAAAATTTCAGCAAAACTGCACGTGAATTAATTGTCCGATTGCAAAAAATTGATAATGATAACTACCCAGAGACCCTATATCAAATGTTTATTGTCAATGCTGGTCCGGGGTTTCGGCTCTTATGGAACACTGTGAAGTCCTTTCTGGACCCAAAAACCACTTCCAAGATACATGTACTCGGGAACAAATATCAAAGCAAGCTGCTAGAAGTAA TTGATGCTAGTGAATTGCCGGAATTCCTTGGTGGCGCTTGTACCTGTCCTGAATATGGAGGGTGTCTTAAAGCTGAAAAAGGACCATGGAAGGACCAAAACATACTCAATATAGTCCTTAGTGGCGAGGCTCAGTGTGCTCGACAAATTGTAACTGTTTCCAATGGAGAGGAAAAGATAATTTCTTATGCCAAGTCCAAGCACCACACAATACGAGGGAGCGATACATCCACTGCTGAGTCTGGATCTGAGGCTGAAGATGTTACGTCTCCAAAAGTACTGAGAAGTTACATCTCCCATCCTAAGTTGACCCCTGTCCGTGAAGAGGTCAAGATGGTTAGAGCCACGAGCTTTTCTACTCGCATGCCTGAATACGATGTTCCTGTCGTCGATAAGGCTGTAGATGCAACATGGAAGAGAGAAGTGACTCGAAAGACTGCCT ] [+] EMBL AK060180 [ AGCTTCTTGATCAAGTTCCCAGCATGCTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGTGGGTTTGAAAAATTTCAGCAAAACTGCACGTGAATTAATTGTCCGATTGCAAAAAATTGATAATGATAACTACCCAGAGACCCTATATCAAATG TATTGTCAATGCTGGTCCGGGGTTTCGGCTCTTATGGAACACTGTGAAGTCCTTTCTGGACCCAAAAACCACTTCCAAGATACATGTACTCGGGAACAAATATCAAAGCAAGCTGCTAGAAGTAA TTGATGCTAGTGAATTGCCGGAATTCCTTGGTGGCGCTTGTACCTGTCCTGAATATGGAGGGTGTCTTAAAGCTGAAAAAGGACCATGGAAGGACCAAAACATACTCAATATAGTCCTTAGTGGCGAGGCTCAGTGTGCTCGACAAATTGTAACTGTTTCCAATGGAGAGGAAAAGATAATTTCTTATGCCAAGTCCAAGCACCACACAATACGAGGGAGCGATACATCCACTGCTGAGTCTGGATCTGAGGCTGAAGATGTTACGTCTCCAAAAGTACTGAGAAGTTACATCTCCCATCCTAAGTTGACCCCTGTCCGTGAAGAGGTCAAGATGGTTAGAGCCACGAGCTTTTCTACTCGCATGCCTGAATACGATGTTCCTGTCGTCGATAAGGCTGTAGATGCAACATGGAAGAGAGAAGTGACTCGAAAGACTGCCTTCTCATCCAAAGACTCTTCTTTGACAAGCACAGAAAGTTCATCCAATGGCTCTTTGGACCGGATCGTTGCAGTTTTGCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAA CTATTTTCGTCAGTCT T GCAAAGG CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT CAAGATAAGCCTTCAGA GATGCCCTGCGAGAAAGAAGAG TTGCTTAATGCTGCTGTCC GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCAGCC AA CCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTCTGAC AGC CAAAGACGGC GTTTGAGAA TTGAGATGTTGTAATCGGCAGC CCC CC CTGCTCGCTT CC CTGGTTCTCC TGTAAAATGTGAAACGACAGACGTCGGATGTAAATCG GCAAAATTCTGACATAAATAAA TGT ] [-] EMBL CB630330 [ TGGTTAGAGCCACGAGCTTTTCTACTCGCATGCCTGAATACGATGTTCCTGTCGTCGATAAGGCTGTAGATGCAACATGGAAGAGAGAAGTGACTCGAAAGACTGCCTTCTCATCCAAAGACTCTTCTTTGACAAGCACAGAAAGTTCATCCAATGGCTCTTTGGACCGGATCGTTGCAGTTTTGCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAA CTATTTTCGTCAGTCT T GCAAAGG CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT CAAGATAAGCCTTCAGA GATGCCCTGCGAGAAAGAAGAG TTGCTTAATGCTGCTGTCC GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCAGCC AA CCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTCTGAC AGC CAAAGACGGC GTTTGAGAA TTGAGATGTTGTAATCGGCAGC CCC CC CTGCTCGCTT CC CTGGTTCTCC TGTAAAATGTGAAACGACAGACGTCGGATGTAAATCG GCAAAATTCTGACATAAATAAAGTGTG ] [-] EMBL CB645369 [ GCAACATGGAAGAGAGAAGTGACTCGAAAGACTGCCTTCTCATCCAAAGACTCTTCTTTGACAAGCACAGAAAGTTCATCCAATGGCTCTTTGGACCGGATCGTTGCAGTTTTGCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAA CTATTTTCGTCAGTCT T GCAAAGG CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT CAAGATAAGCCTTCAGA GATGCCCTGCGAGAAAGAAGAG TTGCTTAATGCTGCTGTCC GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCAGCC AA CCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTCTGAC AGC CAAAGACGGC GTTTGAGAA TTGAGATGTTGTAATGGGCAGC CCC CC CTGCTCGCTT CC CTGGTTCTCC TGTAAAATGTGAAACGACAGACGTCGGATGTAAATCGAGGGAAATTCTGACATAAATAAA ] [-] EMBL CB630369 [ GAAGTGACTCGAAAGACTGCCTTCTCATCCAAAGACTCTTCTTTGACAAGCACAGAAAGTTCATCCAATGGCTCTTTGGACCGGATCGTTGCAGTTTTCCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAAGGAGTCAGACCAGAAGTATTCAACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAATTTCTGGGTTTGTTGAAGCTGAA CTATTTTCGTCAGTCT T GCAAAGG CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT CAAGATAACCCTTCAGATGATGCCCTGCGAGAAAGAAGAG TTGCTTAATGGTGCTGTCC GCAGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAATTGCTA GCGTACATAGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATTT TTTGCTATTAGCA CCAGCC AA CCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTTTGAC AGC CAAAGACGGC GTTTGAGAA TTGAGACGTTGTAATCGGCAGC CCC CC CTGCTCGTTT CC ATGGTTGTCC CGTAAAATGTGAAACGACAGACGTCGGATGTAAATCG GCAAAATTATGACATAAATAAA TGTGTTTTTTTGC A AAAAAAAAAAAG ] [+] EMBL AU100741 [ ctcCCAATGGCTCTTTGGACCGGATCGTTGCAGTTTTGCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAA CTATTTTCGTCAGTCT T GCAAAGG CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT CAAGATAAGCCTTCAGA GATGCCCTGCGAGAAAGAAGAG TTGCTTAATGCTGCTGTCC GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCAGCC AA CCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTCTGAC AGC CAAAGACGGC GTTTGAGAA TTGAGATGTTGTAATCGGCAGC CCC CC CTGCTCGCTT CC CTGGTTCTCC TGTAAAATGTGAAACGACAGACGTCGGATGTAAATCG GCAAAATTCTGACATAAATAAA TGTGTTTTTTTGC A AAAAAA ] [-] EMBL CA759466 [ GCAGTTTTGCTGGCAGTTTTTATGGCAATCATCACTTTAGTTCGGTCAGTTAAAGATCCTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCCACATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAA CTATTTTCGTCAGTCT T GCAAAGG CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT CAAGATAAGCCTTTAGA GATGCCCTGCGAGAAAGAAGAG TTGCTTAATGCTGCTGTCC GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCC CCAGCC AA CCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTCTGAC AGC CAAAGACGGC GTTTGAGAA TTGAGATGTTGTAATCGGCAGC CCC CC CTGCTCGCTT CC CTGGTTTTCC TGTAAAATGTGAAACGACAGACGTCGGATGTAAATCG GCAAAATTCTGACATAAATAAA TGTGTTTTTTTGCCCCGAGTTAAAAAAAAAAAaa] [+] EMBL BQ906770 [ CATTACTTTAGTTCGGTCAGTTAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAACATTATATCCAGACTCGANGCCCAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTTTGTTGAAGCTGAA CTATTTTCGTCAGTCT T GCAAAGG CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT CAAGATAAGCCTTCAGA GATGCCCTGCGAGAAAGAAGAGCTTGCTTAATGCTGCTGTCC GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGATGGAACTACTACGCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCAGCCAAA NCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTCTGAC AGC CAAAGACGGC GTTTGAGAA TTGAGATGTTGTAATCGGCAGC CCC CC CTGCTCGCTT CC CTGGTTCTCC TGTAAAATGTGAAACGACAGACGTCGGATGTAAATCG GC AAATTCTGACATAAATAAA TGTGTTTTTTTGC A AAAAA ] [+] EMBL BI807055 [ ttgCCGACCACTTTCCCCAACTCCTGGGTTNGTTGAAGCTGAACCTATGTTCGTCAGTCTGTGGCAAAGGCCTGGGAGATCTTGAAGAGAAGTTCCTGATGCTTCCAAGATAAGCCTTCAGA GATGCCCTGCGAGAAAGAAGAG TTGCTTAATGCTGCTGTCC CCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACCAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCAGCC AATCCAGGAGAGGGTACACC CCCTATCTTGGGATNATACTTTCTGAC AGC C AAGACGGC GTTTGAGAACTTGAGATGTTGTAATC GCAGC CCC CC CTGCTCGCTT CC CTGGTTCTCC TGTAAAATGTGAAACGACAGACGTCGGATGTAAATC GCCAAATTCTGACATAAATAAA TGTGTCCCCCCCC A AAAAAAAA ] [+] EMBL CB682425 [ TCCCCCACTCCTGGGTTTGTTGAAGCTGAA CTATTTTCGTCAGTCT T GCAAAGG CTGGGAGATCTTGAAGAGAAGTTCCTGATGCTT CAAGATAAGCCTTCAGA GATGCCCTGCGAGAAAGAAGAG TTGCTTAATGCTGCTGTCC GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCAGCC AA CCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTCTGAC AGC CAAAGACGGC GTTTGAGAA TTGAGATGTTGTAATCGGCAGC CCC CC CTGCTCGCTT CC CTGGTTCTCC TGTAAAATGTGAAACGACAGACGTCGGATGTAAATCG GCAAAATTCTGACATAAATAAA TGT ] [+] EMBL CA757425 [ AAGTTCCTGATGCTT CAAGATAAGCCTTCAGA GATGCCCTGCGAGAAAGAAGAG TTGCTTAATGCTGCTGTCC GCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGAGGTTGCCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCAGCC AA CCAG ] [+] EMBL BM420762 [ AGAAGA TTGCTTAATGCTGCTGTCCNCCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACNAAGAAGGCCCTACATGAGGCTCTTATCAGGCAAGA GGAACTACTA GCCTACATCGACAGTAAGGA GTT CCAAGGCTC AGAAAAAGAAGAAGGC GATGT TTTGCTATTAGCA CCA CC AA CCAGGAGAGGGTACACC CCCTATCTTGGGATTATACTTTCTGNC AGC C AAGACGGC GTTTGAGAA TTGAGATGTTGTAATC GCAGC CCC CC CTGCTCGCTTCCC CTGGTTCTCC TGTAAAATGTGAAACGAC GACGTCGGATGTAAATCG GC AAATTCTGACATAAATAAA TGTGTTTTTTT C A AAAAAAAAA ] [+] EMBL BI811089 [ atGTAAGGAGGTTGCCAAGGCTCAAGAAAAAGAAGAAGGCAGATGTGTTTGCTATTAGCAGCCAGCC AA CCAGGAGAGGGTACACCACCCTATCTTGGGATTATACTTTCTGACAAGCACAAAGACGGCAGTTTGAGAA TTGAGATGTTGTAATCGGCAGCACCCACCACTGCTCGCTT CCACTGGTTCTCCATGTAAAATGTGAAACGACAGACGTCGGATGTAAATC GCAAAATTCTGACATAAATAAA TGTGTTTTTTTGC A AAAAA ] consensusID : consensus_14515#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 159 fasta sequence [GACGGCGTTTGAGAATTGAGATGTTGTAATCGGCAGCCCCCCCTGCTCGCTTCCCTGGGTTCTCCTGTAAAATGTGAAACGACAGACGTCGGATGTAAATCGGCCAAAATTCTGACATAAATAAATGTGTTTTTTGGCACCGAGTTCTTCCCTAAAAAA] [+] EMBL BI803932 [GACGGCGTTTGAGAATTGAGATGTTGTAATCGGCAGCCCCCCCTGCTCGCTTCCCTGGGTTCTCCTGTAAAATGTGAAACGACAGACGTCGGATGTAAATCGGCCAAAATTCTGACATAAATAAATGTGTTTTTTGGCACCGAGTTCTTCCCTAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14515#0 ATTGAACGCGCTTGGAAAGGTTGACCCCAATAAGCTTATGCATGTAACAACAATGGACCG 60 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 ATATGTAAGATACCATGTGAAGGAATTTGAACGGAGCTTCTTGATCAAGTTCCCAGCATG 120 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 CTCTCTTGCTGCAAAAAGGCACATTGATTCGAGCACAACAATTCTTGATGTTCAGGGTGT 180 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 GGGTTTGAAAAATTTCAGCAAAACTGCACGTGAATTAATTGTCCGATTGCAAAAAATTGA 240 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TAATGATAACTACCCAGAGACCCTATATCAAATGTTTATTGTCAATGCTGGTCCGGGGTT 300 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TCGGCTCTTATGGAACACTGTGAAGTCCTTTCTGGACCCAAAAACCACTTCCAAGATACA 360 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TGTACTCGGGAACAAATATCAAAGCAAGCTGCTAGAAGTAATTGATGCTAGTGAATTGCC 420 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 GGAATTCCTTGGTGGCGCTTGTACCTGTCCTGAATATGGAGGGTGTCTTAAAGCTGAAAA 480 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 AGGACCATGGAAGGACCAAAACATACTCAATATAGTCCTTAGTGGCGAGGCTCAGTGTGC 540 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TCGACAAATTGTAACTGTTTCCAATGGAGAGGAAAAGATAATTTCTTATGCCAAGTCCAA 600 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 GCACCACACAATACGAGGGAGCGATACATCCACTGCTGAGTCTGGATCTGAGGCTGAAGA 660 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TGTTACGTCTCCAAAAGTACTGAGAAGTTACATCTCCCATCCTAAGTTGACCCCTGTCCG 720 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TGAAGAGGTCAAGATGGTTAGAGCCACGAGCTTTTCTACTCGCATGCCTGAATACGATGT 780 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TCCTGTCGTCGATAAGGCTGTAGATGCAACATGGAAGAGAGAAGTGACTCGAAAGACTGC 840 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 CTTCTCATCCAAAGACTCTTCTTTGACAAGCACAGAAAGTTCATCCAATGGCTCTTTGGA 900 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 CCGGATCGTTGCAGTTTTGCTGGCAGTTTTTATGGCAATCATTACTTTAGTTCGGTCAGT 960 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TAAAGATCTTGCTGCAAAGAGATTGCCAGATAAAAACGAGTCAGAACAGAAGTATTCAAC 1020 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 ATTATATCCAGACTCGATGCCAAAAGAGGAATTCCGACCACCTTCCCCAACTCCTGGGTT 1080 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TGTTGAAGCTGAACTATTTTCGTCAGTCTTGCAAAGGCTGGGAGATCTTGAAGAGAAGTT 1140 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 CCTGATGCTTCAAGATAAGCCTTCAGAGATGCCCTGCGAGAAAGAAGAGTTGCTTAATGC 1200 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TGCTGTCCGCCGTGTGGATGCGCTGGAAGCTGAACTTATTGTAACAAAGAAGGCCCTACA 1260 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 TGAGGCTCTTATCAGGCAAGAGGAACTACTAGCCTACATCGACAGTAAGGAGGTTGCCAA 1320 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 GGCTCAGAAAAAGAAGAAGGCGATGTTTTGCTATTAGCACCAGCCAACCAGGAGAGGGTA 1380 consensus_14515#1 ------------------------------------------------------------ consensus_14515#0 CACCCCCTATCTTGGGATTATACTTTCTGACAGCCAAAGACGGCGTTTGAGAATTGAGAT 1440 consensus_14515#1 --------------------------------------GACGGCGTTTGAGAATTGAGAT 22 ********************** consensus_14515#0 GTTGTAATCGGCAGCCCCCCCTGCTCGCTTCCCTGG-TTCTCCTGTAAAATGTGAAACGA 1499 consensus_14515#1 GTTGTAATCGGCAGCCCCCCCTGCTCGCTTCCCTGGGTTCTCCTGTAAAATGTGAAACGA 82 ************************************ *********************** consensus_14515#0 CAGACGTCGGATGTAAATCGGC-AAAATTCTGACATAAATAAATGTGTTTTTTTGCAAAA 1558 consensus_14515#1 CAGACGTCGGATGTAAATCGGCCAAAATTCTGACATAAATAAATGTGTTTTTTGGCACCG 142 ********************** ****************************** *** consensus_14515#0 AAAA-------AAAAGA 1568 consensus_14515#1 AGTTCTTCCCTAAAAAA 159 * **** * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||