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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14526#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2404 fasta sequence
[CCCATCCACCCACCCGCGCACCCCGCCGGCGACAACGGCAATCGCCATGGCTCGTCGGCGAATCGCCGCCCATGGTGAAAGCGCGGCGACCGGTTACCGGCGCAGTGCCAGCCGAGTGCTGGGGTTGCCGAGGTCCAAGCGGCGGCAGAAGGCGGGCGGCGCTTGGGATTGGGAAGGAAGCGGGCCGTCGCGGCAACTAGGGCTTCCGCGGCTAGGAGAATATTGCTTGGCTTCAAATCACAATGTACTAATGGCAATTCACACTGGTTATGAAGATAATCCAAAGCAAGTGCTACATCCAAGGCTATATTAATTCTTTGTCTTAAAGTCAGCACCTTTGTTTGACTAATATGTTCATGGGATTTTGGATGTAACCACATATCTAGGTTCCCATTTGGAAAATATGGGAACACTATAGCCTTGAAGTCTGCCCCAGTTGAATCCACAGAAGAGCATAGAGTAATAATTTTCACGAGATTTCGGTGGCGGACATTTTGTAGGGTTTCACACTCGGCAACAAAGCTCTTATTAGATCCATGGATATCAAGGTTAAAAATCTTGATGGCGATATGTTCTTCCTGAAGATGCAGATTGTCCTTTTCTTTGAAAGGAAGATGCAGATTGCCCTTATAAACTGTTCCAAATGATCCTGAGCCAAGTAAGTTAGTTGAAGAGAATCTATTTGTGGCCTTTAGAACATCTTCATACGTTATGTTCCTGTGCTCATTCAGCTGTTGTACATGTGGCTCTGCTTGCATTCTCTTCGTCCAAATATATTTTGCAAGGCATAACAAAGTGAAAGTGATAGCAACAATTGGTATTACTGTCGTTAGGACTAGAACCAATGAC---CTATGGTTCCTTTTCTTGTCAACCGATTTTGAACAAAGAGGCACACCTCTCATTGGAGTTTTTGTGCACAGATAATCATTTCCTTCAATTGATACCACACTAGCATTGGCAAAAATACCACTGGTTGGCACTGCTCCATCAAAATTATT-GAATGATAAGTTGAGAACTTGCAAAG-AATGTAACAACGTTAGAAACTGTGGAATTTCTCCTGATAAA-TTGTTAT-GAGATATATCCATCACCTTGATGCCTACCATGTTCACAAATGTTTGCGGAATGCTTCCTACAAAGAAATTGCTTTGCATCTCAAGATACTCTAGAACCACGCATTGACTAAGAGTGGATGGGATATCTCCAGACAATCTGTTGTATGAAATGATGAGCTTATTCAGACTGACAAGGTTGCCTACTTCATCTGATATGCTTCCGGACAAGTAATTGTATGACAAGTCTAACACTATTGAAAGTGAAGAAATTTTAAAGATCGTCTCTGGTATTGTTCCATCTAGTGAATTGTGAGCAAGGTTGAGTATTTCGAGTTGAGTACAATACCCTATACTCACAGGTATGCTTCCACTCAAGTTGTTCCAATCCAAATTTAGATTATTCAGCTGAACAAGTTTCCCAATGTCATCTGGGATTTGACCAGAGAGTCTGTTTCGAGCAAAGGACAGTTTGCCTAATTTGCGCAAATTTCCGATTGTTAGAGGTATTTTTTCTGACAATTGATTGTAATCCATGTACAATTCAGTGAGGCTCTTAAGATTGCCTATCTCTTGTGGTATAGGTCCGGAAATTTTATTATTTGTTAGCCACAATCTTTGGAGATCACTAGACAGATTGCCTACAGAACTTGGCAGATTTCCTTGAAGATTGTTCCCATCCAACATCAGCTTAGTCAATCTTGTGCAATTTGAAAGTGACGAGATAAAGCCCCAGTCGCCTGCTTCTAGCATGTTGTATGCCACGTCAAGATCCTCCAAGTTTGTCAGTGATCCAAAGGATGGCATGATCCCAGTTAACTTGTTGTCAGCTAGGTATAGCATTTGTAGATGGGTTAAATTGAGAAGGGAAGTTGGGATTGAGCCCTTAAACTTATTTGCTGAAAGAATTAAGCCTTCAATGTTTGGGAGTGTATAGCCGATGTCTAGAGGTAATCTTCCGGTGAGTGAGTTATTTGCCGCCACCAGAGATGTCAGGGATGACATATTGAAGAGAGATGGTGGAACTGCTCCAGAAAAGTTGTTTAAATTCAAGTTCAATTCTTCTAGTGTTGGAATATGTCCTAAGCTCTCTGGTATGCTCCCATCTAAACAATTCTGTGAAAGACGAAGATAAAGTAGGGAGGAAAGGTTCCCAACAGAGGAAGGTATTGTTCCTGTGAGACAGTTTTCTCCTAAATCAAGATATTGAACTTGTGGAGACACGGTTTTAACAGGTGGTATAGAACCGGAAAAATTGTTCTGGTTGAGGTAAATGCTGATAAGTGACAACGTGTTGAGTAGAGCCTTTGGGAGTTCTCCACTGAGACTATTGCTATTGAGAATGAGTTGTTGCA]
[+] EMBL AK069419 [CCCATCCACCCACCCGCGCACCCCGCCGGCGACAACGGCAATCGCCATGGCTCGTCGGCGAATCGCCGCCCATGGTGAAAGCGCGGCGACCGGTTACCGGCGCAGTGCCAGCCGAGTGCTGGGGTTGCCGAGGTCCAAGCGGCGGCAGAAGGCGGGCGGCGCTTGGGATTGGGAAGGAAGCGGGCCGTCGCGGCAACTAGGGCTTCCGCGGCTAGGAGAATATTGCTTGGCTTCAAATCACAATGTACTAATGGCAATTCACACTGGTTATGAAGATAATCCAAAGCAAGTGCTACATCCAAGGCTATATTAATTCTTTGTCTTAAAGTCAGCACCTTTGTTTGACTAATATGTTCATGGGATTTTGGATGTAACCACATATCTAGGTTCCCATTTGGAAAATATGGGAACACTATAGCCTTGAAGTCTGCCCCAGTTGAATCCACAGAAGAGCATAGAGTAATAATTTTCACGAGATTTCGGTGGCGGACATTTTGTAGGGTTTCACACTCGGCAACAAAGCTCTTATTAGATCCATGGATATCAAGGTTAAAAATCTTGATGGCGATATGTTCTTCCTGAAGATGCAGATTGTCCTTTTCTTTGAAAGGAAGATGCAGATTGCCCTTATAAACTGTTCCAAATGATCCTGAGCCAAGTAAGTTAGTTGAAGAGAATCTATTTGTGGCCTTTAGAACATCTTCATACGTTATGTTCCTGTGCTCATTCAGCTGTTGTACATGTGGCTCTGCTTGCATTCTCTTCGTCCAAATATATTTTGCAAGGCATAACAAAGTGAAAGTGATAGCAACAATTGGTATTACTGTCGTTAGGACTAGAACCAATGAC CTATGGTTCCTTTTCTTGTCAACCGATTTTGAACAAAGAGGCACACCTCTCATTGGAGTTTTTGTGCACAGATAATCATTTCCTTCAATTGATACCACACTAGCATTGGCAAAAATACCACTGGTTGGCACTGCTCCATCAAAATTATT GAATGATAAGTTGAGAACTTGCAAAG AATGTAACAACGTTAGAAACTGTGGAATTTCTCCTGATAAA TTGTTAT GAGATATATCCATCACCTTGATGCCTACCATGTTCACAAATGTTTGCGGAATGCTTCCTACAAAGAAATTGCTTTGCATCTCAAGATACTCTAGAACCACGCATTGACTAAGAGTGGATGGGATATCTCCAGACAATCTGTTGTATGAAATGATGAGCTTATTCAGACTGACAAGGTTGCCTACTTCATCTGATATGCTTCCGGACAAGTAATTGTATGACAAGTCTAACACTATTGAAAGTGAAGAAATTTTAAAGATCGTCTCTGGTATTGTTCCATCTAGTGAATTGTGAGCAAGGTTGAGTATTTCGAGTTGAGTACAATACCCTATACTCACAGGTATGCTTCCACTCAAGTTGTTCCAATCCAAATTTAGATTATTCAGCTGAACAAGTTTCCCAATGTCATCTGGGATTTGACCAGAGAGTCTGTTTCGAGCAAAGGACAGTTTGCCTAATTTGCGCAAATTTCCGATTGTTAGAGGTATTTTTTCTGACAATTGATTGTAATCCATGTACAATTCAGTGAGGCTCTTAAGATTGCCTATCTCTTGTGGTATAGGTCCGGAAATTTTATTATTTGTTAGCCACAATCTTTGGAGATCACTAGACAGATTGCCTACAGAACTTGGCAGATTTCCTTGAAGATTGTTCCCATCCAACATCAGCTTAGTCAATCTTGTGCAATTTGAAAGTGACGAGATAAAGCCCCAGTCGCCTGCTTCTAGCATGTTGTATGCCACGTCAAGATCCTCCAAGTTTGTCAGTGATCCAAAGGATGGCATGATCCCAGTTAACTTGTTGTCAGCTAGGTATAGCATTTGTAGATGGGTTAAATTGAGAAGGGAAGTTGGGATTGAGCCCTTAAACTTATTTGCTGAAAGAATTAAGCCTTCAATGTTTGGGAGTGTATAGCCGATGTCTAGAGGTAATCTTCCGGTGAGTGAGTTATTTGCCGCCACCAGAGATGTCAGGGATGACATATTGAAGAGAGATGGTGGAACTGCTCCAGAAAAGTTGTTTAAATTCAAGTTCAATTCTTCTAGTGTTGGAATATGTCCTAAGCTCTCTGGTATGCTCCCATCTAAACAATTCTGTGAAAGACGAAGATAAAGTAGGGAGGAAAGGTTCCCAACAGAGGAAGGTATTGTTCCTGTGAGACAGTTTTCTCCTAAATCAAGATATTGAACTTGTGGAGACACGGTTTTAACAGGTGGTATAGAACCGGAAAAATTGTTCTGGTTGAGGTAAATGCTGATAAGTGACAACGTGTTGAGTAGAGCCTTTGGGAGTTCTCCACTGAGACTATTGCTATTGAGAATGAGTTGTTGCA]
[+] EMBL AU108126 [ AGTCTGCCCCAGTTGAATCCACAGAAGAACATAGAGTAATAATTTTCACGAGATTTCGGTGGCGGACATTTTGTAGGGTTTCACACTCGGCAACAAAGCTCTTATTAGATCCATGGATATCAAGGTTAAAAATCTTGATGGCGATATGTTCTTCCTGAAGATGCAGATTGCCCTTTTCTTTGAAAGGAAAATGCAGATTGCCCTTATAAACTGTACCAAATGATCCTGAGCCAAGTAAGTTAGTTGAAGAGAATCTATTTGTGGCCTTTAGAACATCTTCATATGTTATGTTCCTGTGCTCATTCAGCTGTTGTACATGTGGCTCTGCTTGCATTCTCTTCATACAAATAATTTTTGCAAGGCATAATAAAGTGAAAGTGATAGCAACAATTGGTATTACTATCGTTAGGACTAGAACCAATGACCTACTATGGTTCCTTTTCTTGTCAACCAATTTTGAACAAAGAGGCATACCTGTCGTTGGAGTTTCTGTGCACAGATGGTCATTTCCTTCAATTGACACCACACTAGCATTGGCAAAAATACCACTGCTTGGCACCACTCCATGAAAATTATTGGAATGATAAGTTGAGAACTTGCAAAGNAACGCAACAACGTTAGAAACTGTGGAATTTCTCCCGATAAAGTTGTNATGGAGATATATC ]
[-] EMBL CB633582 [ GGGATATCTCCAGACAATCTGTTGTATGAAATGATGAGCTTATTCAGACTGACAAGGTTGCCTACTTCATCTGATATGCTTCCGGACAAGTAATTGTATGACAAGTCTAACACTATTGAAAGTAAAGAAATTTTAAAGATCGTCTCTGGTATTGTTCCATCTAGTGAATTGTGAGCAAGGTTGAGTATTTCGAGTTGAGTACAATACCCTATACTCACAGGTATGCTTCCACTCAAGTTGTTCCAATCCAAATTTAGATTATTCAGCTGAACAAGTTTCCCAATGTCATCTGGGATTTGACCAGAGAGTCTGTTTCGAGCAAAGGACAGTTTGCCTAATTTGCGCAAATTTCCGATTGTTAGAGGTATTTTTTCTGACAATTGATTGTAATCCATGTACAATTCAGTGAGGCTCTTAAGATTGCCTATCTCTTGTGGTATAGGTCCGGAAATTTTATTATTTGTTAGCCACAATCTTTGGAGATCACTAGACAGATTGCCTACAGAACTTGGCAGATTTGCTTGAAGATTGTTCCCATCCAACATCAGCTTAGTCAATCTTGTGCAATTTGAAAGTGACGAGATAAAGCCCCAGTCGCCTGCTTCTAGCATGTTGTATGCCACGTCAAGGTCCTCCAAGTTTGTCAGTGATCCAAAGGATGGCATGATCCCAGTTAACTTGTTGTCAGCTAGGTATAGCATTTGTAGATGGGTTAAATTGAGAAGGGAAGTT ]
consensusID : consensus_14526#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1020 fasta sequence
[TACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCCTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCGCCGTCAGCTGTCCTGCCGCCGCTGCCATCAACAATCCTCCTCCTCCTCCGGCTGCACCATCCCATGACAGTGATCGTGCTCCACGGGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTCGACATCCTCCCCCAGGTCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGNGCAGTAGGCCTTCAGCCTTATGCCAGCGCGGATCCAGAAAATAGAGTCATTTGNGGCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGGTTCTAGAGTGTATTAGCAAAGAGAATTAGCGAGAAGTNATTTGGTGTCAGCTGANNATCAATGCTTTACACTATGGATCCNNGCACTGACCTTATGCCNTGGTNNCATATNCNTNANTTCGTCGTATAAATCTAAAAATACCCATGTATTATGGAAAATATTAACTCTATAGTCACACTTGATGGAGATTCTAGCTCGTACTGTGAGACAANGGTACCCTCACTTCACGTCGTCTGTNAAACCGTGNGAGGTATTGACGGCNGCTATCCCCTCTCANATGAGAAACTCCGATATTGCCTAATGAACTGTCGATATTATTGGACGATGATAAAAAAAAAAAACTAGGGCCGCCAATNCCTTAAGTTTCCCCTCNGCGTNTACTGAAGAACTGTACATATCTTACCCCTTCCNTGTNAAGAGGNNCNTCCATACCAAAGGAGGGAGGGGGACGGAGGGNGGGGCGGCCCCCTCCTCTCTTCCTCTCTAGATAGAGAAGAGAGAGTGTATCGTTTTATN]
[+] EMBL AW155164 [TACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCCTCGGGAACGCGGACACAGGTGGTGCATGGCTGTCGTCAGCTCGTGCCGTAAGGTGTTGGGTTAAGTCTCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCGCCGTCAGCTGTCCTGCCGCCGCTGCCATCAACAATCCTCCTCCTCCTCCGGCTGCACCATCCCATGACAGTGATCGTGCTCCACGGGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTCGACATCCTCCCCCAGGTCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGNGCAGTAGGCCTTCAGCCTTATGCCAGCGCGGATCCAGAAAATAGAGTCATTTGNGGCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGGTTCTAGAGTGTATTAGCAAAGAGAATTAGCGAGAAGTNATTTGGTGTCAGCTGANNATCAATGCTTTACACTATGGATCCNNGCACTGACCTTATGCCNTGGTNNCATATNCNTNANTTCGTCGTATAAATCTAAAAATACCCATGTATTATGGAAAATATTAACTCTATAGTCACACTTGATGGAGATTCTAGCTCGTACTGTGAGACAANGGTACCCTCACTTCACGTCGTCTGTNAAACCGTGNGAGGTATTGACGGCNGCTATCCCCTCTCANATGAGAAACTCCGATATTGCCTAATGAACTGTCGATATTATTGGACGATGATAAAAAAAAAAAACTAGGGCCGCCAATNCCTTAAGTTTCCCCTCNGCGTNTACTGAAGAACTGTACATATCTTACCCCTTCCNTGTNAAGAGGNNCNTCCATACCAAAGGAGGGAGGGGGACGGAGGGNGGGGCGGCCCCCTCCTCTCTTCCTCTCTAGATAGAGAAGAGAGAGTGTATCGTTTTATN]
consensusID : consensus_14526#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1001 fasta sequence
[CTGTGGTCCGCCCATCCACCCACCCGCGCACCCCGCCGGCGACAACGGCAATCGCCATGGCTCGTCGGCGAATCGCCGCCCATGGTGAAAGCGCGGCGACCGGTTACCGGCGCAGTGCCAGCCGAGTGCTGGGGTTGCCGAGGTCCAAGCGGCGGCAGAAGGCGGGCGGCGCTTGGGATTGGGAAGGAAGCGGGCCGTCGCGGCAACTAGGGCTTCCGCGGCTAGGAGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTCGACATCCTCCCCCAGGTCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAG--A-GTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAA-TCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTCTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTTCCACTTCCCACGTCGCGTCTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCACTTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATGTAAACTTGGTCCGATTTATATATATGTGGACAGTAATGTTATTAAAAAAAAAAGACTTGGGTGTTGGAGAGGCCAACATGAATCTAGCTGGGGAATTCCTAACGGGGGCAGCTGCGCCCAAACTTGGTGAAAAAAAACAAAAAAAAAACTCGAGACTAGTTCTC]
[+] EMBL AK121885 [CTGTGGTCCGCCCATCCACCCACCCGCGCACCCCGCCGGCGACAACGGCAATCGCCATGGCTCGTCGGCGAATCGCCGCCCATGGTGAAAGCGCGGCGACCGGTTACCGGCGCAGTGCCAGCCGAGTGCTGGGGTTGCCGAGGTCCAAGCGGCGGCAGAAGGCGGGCGGCGCTTGGGATTGGGAAGGAAGCGGGCCGTCGCGGCAACTAGGGCTTCCGCGGCTAGGAGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTCGACATCCTCCCCCAGGTCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAG A GTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAA TCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTA ]
[+] EMBL BI798803 [ TTGGGCCAGAGAATAAAGACGTAGCCGGCGTCATCGACCAGGGGCGGAAACAATTATGGGGCAGTA GCCTTCAGCCTTATGCAGCGCCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAG A GTGTATTAGC AAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAA TCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTCTAGCTCCGTCACTGATGAAGACAAACGGTGACCTTCCACTTCCCACGTCGCGTCTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCACTTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATGTAAACTTGGTCCGATTTATATATATGTGGACAGTAATGTTATTAAAAAAAAAA ]
[+] EMBL AU089751 [ ACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAG A GTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAA TCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTCTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTTCCACTTCCCACGTCGCGTCTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCA TTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATGTAAACTTGGTCCGATTTATATATATGTGGACAGTAATGTTATTAAAAAAAAAA ]
[-] EMBL AW155487 [ ATAGTGATGTCAATACATATAATTCTTGTTTCTAG A GTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACAATATGGATCCGCCACTGACCTTAAGCCTGGGTCCATAATCCTTAAATGGTCGGTAAAATTTTTAAAATTCCCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTCTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTTCCACTTCCCACGTCGCGTTTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCACTTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATGTAAACTTGGTCCGATTTATATATATGTGGACAGTAATGTTATTAATTACTTGTGACTTGGGTGTTGGAGAGGCCAACATGAATCTAGCTGGGGAATTCCTAACGGGGGCAGCTGCGCCCAAACTTGGTGAAAAAAAACAAAAAAAAAACTCGAGACTAGTTCTC]
[+] EMBL BI798194 [ TTCCTAGGAAGGTGTATTTACAAAGAGATTAGCGAGAAGTTATTGGTGTCA CTGAAATC ATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAA TCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTCTAGCTCCGTCACTGATGAAGAC AAAGGTGACCTTCCACTTCCCACGTCGCGTCTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCACTTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATGTAAACTTGGTCCGATTTATATATATGTGGACAGTAATGTTATTAAAAAAAAAA ]
[-] EMBL CF296867 [ GAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAA TCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTCTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTTCCACTTCCCACGTAGAGTCTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCACTTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATGTAA ]
consensusID : consensus_14526#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 882 fasta sequence
[CAACAGACCGTAATGTCACTTATTAACGGCTGCGGCGCCGGCGGCGATCCGCCGCCTGCTCGTCGGGACACTGAGCATCCAGCCGCTGCTAGTGATTGCGGCTCTCCATCGGCAGCTCAGCCTCCAGTTGCCGCCGTCAGCTGTCCTGCCGCCGCTGCCATCAACAA---TCCTCCTCCTCCGGCTGCACCATCCCATGACAGTGATCGTGCTCCACGGGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTCGACATCC---------TCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAGAGTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAATCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTTTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTTCCACTTCCCACGTCGCGTCTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCACTTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATATGTAAACTTGGTCCGATTTATAGATATGTGGACAGTAATGTTATTAATTACTTGGAAATTAAGGA]
[+] EMBL CF296866 [CAACAGACCGTAATGTCACTTATTAACGGCTGCGGCGCCGGCGGCGATCCGCCGCCTGCTCGTCGGGACACTGAGCATCCAGCCGCTGCTAGTGATTGCGGCTCTCCATCGGCAGCTCAGCCTCCAGTTGCCGCCGTCAGCTGTCCTGCCGCCGCTGCCATCAACAATCCTCCTCCTCCTCCGGCTGCACCATCCCATGACAGTGATCGTGCTCCACGGGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTCGACATCCTCCCCCAGGTCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAGAGTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTA ]
[+] EMBL CA753292 [ CACTTATTAACGGCTGCGGCGCCGGCGGCGATCCGCCGCCTGCTCGTCGGGACACTGAGCATCCAGCCGCTGCTAGTGATTGCGGCTCTCCATCGGCAGCTCAGCCTCCAGTTGCCGCCGTCAGCTGTCCTGCCGCCGCTGCCATCAACAA TCCTCCTCCTCCGGCTGCACCATCCCATGACAGTGATCGTGCTCCACGGGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTCGACATCC TCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATNCTTGTNTCTAGAGTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTCCCATAATCCTTAAT ]
[-] EMBL CB629333 [ GCCATCAACAA TCCTCCTCCTCCGGCTGCACCATCCCATGACAGTGATCGTGCTCCACGGGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTCGACATCC TCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAGAGTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAATCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTTTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTTCCACTTCCCACGTCGCGTCTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCACTTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATATGTAAACTTGGTCCGATTTATAGATATGTGGACAGTAATGTTATTAATTACTTGGAAATTAAGGA]
[-] EMBL CB629332 [ CCTCCTCCTCCGGTGGCACCATCCCATGACAGTGATCGTGCTCCACGGGGTATTCCACACACGCCTACTATTGACCCGATTCACAACCCTCCTGATCCTGGACATCC TCCCCCAGGTCCCCCATGACAATCCCAACCCCGCCTTTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAGAGTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCGCCACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAATCTTAAAAATACCATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAGCACTTGATGTGAAGATTTTTTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTTCCACTTCCCACGTTGCGTCTGGTAGAAACCGTGGAAGAGGGATATGGAAGCGCCGGCCTATCCACTTCGTCCAAGATGAGGAAACTCCCGTGATTTATATGCCATATATATGTAAACTTGGTCCGATTTA AGGTATGTGGACAGTAATct ]
[+] EMBL OSS14723A [ ACGTAGCCGGCGTCGTCGACCAGGGGCGGAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAGTCATTGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTCTAGAGTGTATTAGCAAAGAGATTAGCGAGAAGTTATTGGTGTCAGCTGAAATCAATGCTTACACTATGGATCCG CACTGACCTTATGCCTGGTTCCATAATCCTTAATTGCTCGTTATAATCTTAAAAATACCATG NATTTATGG AATATTT AACTC ]
consensusID : consensus_14526#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 841 fasta sequence
[AAACAACACAAAAGCTACAAATACGTTCCATTATATTATTCTTCCATACATGAAATTGCCAAATCTTAATTTGCCTCATTTGAACACTAACTACATTGGATTAGAAAACAAAACAAAAGCTACAAATATGTTACATTACATTATTCTTCCATACATGAAATTGCCAAATCTTAATTTGCCTCATTTGACGCTCATGTTTGAGGCTGCATGCTTGATTCGAAGAATCATGTTAGAAACTTGCCCCATTTCTGGCCGCTCTCTAGGCAATGCCATTGAACATGAGAGGCCTATTTTAACCAATGGAATGACACACCTCTCCATTACATCGGCTACACTGACATCATCTTGTAGCATTGTGGGATCAACAACCTCGTGAATGCTATTGGACAATGCTGCATCAACAAATTCATGCAGGGTAGTGCCACCATTAAATTTTTCATCAATAGGACTACTACCTGTTACCATTTCTAAGAGAAGGATTCCGAAGCTGTAGACATCACCCTTGGTTGAGATATCTTTGCTCATGCCATACTCTGGTGGAATATATCCAATAGATCCTTTTAGACAAGCCAAGCTTGTTGATGTATATTGATGTGCGTTTGATCTAGTGTATACAAATCTTGCTAAGCCAAAGTCACTGACGTGTGCAACCATGTCACTATCCAACAGAATATTGCTTGGCTTCAAATCACAATGTACTAATGGCAATTCACACTGGTTATGAAGATAATCCAAAGCAAGTGCTACATCCAAGGCTATATTAATTCTTTGTCTTAAAGTCAGCACCTTTGTTTGACTAATATGTTCATGGGATTTTGGATGTAACCACATATCTAGGTTC]
[+] EMBL CB633583 [AAACAACACAAAAGCTACAAATACGTTCCATTATATTATTCTTCCATACATGAAATTGCCAAATCTTAATTTGCCTCATTTGAACACTAACTACATTGGATTAGAAAACAAAACAAAAGCTACAAATATGTTACATTACATTATTCTTCCATACATGAAATTGCCAAATCTTAATTTGCCTCATTTGACGCTCATGTTTGAGGCTGCATGCTTGATTCGAAGAATCATGTTAGAAACTTGCCCCATTTCTGGCCGCTCTCTAGGCAATGCCATTGAACATGAGAGGCCTATTTTAACCAATGGAATGACACACCTCTCCATTACATCGGCTACACTGACATCATCTTGTAGCATTGTGGGATCAACAACCTCGTGAATGCTATTGGACAATGCTGCATCAACAAATTCATGCAGGGTAGTGCCACCATTAAATTTTTCATCAATAGGACTACTACCTGTTACCATTTCTAAGAGAAGGATTCCGAAGCTGTAGACATCACCCTTGGTTGAGATATCTTTGCTCATGCCATACTCTGGTGGAATATATCCAATAGATCCTTTTAGACAAGCCAAGCTTGTTGATGTATATTGATGTGCGTTTGATCTAGTGTATACAAATCTTGCTAAGCCAAAGTCACTGACGTGTGCAACCATGTCACTATCCAACAGAATATTGCTTGGCTTCAAATCACAATGTACTAATGGCAATTCACACTGGTTATGAAGATAATCCAAAGCAAGTGCTACATCCAAGGCTATATTAATTCTTTGTCTTAAAGTCAGCACCTTTGTTTGACTAATATGTTCATGGGATTTTGGATGTAACCACATATCTAGGTTC]
consensusID : consensus_14526#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 332 fasta sequence
[CTGTCCAAGCAGCGGCANACGCGGGCGGCGCCACAACCAGGGCTTCCGCGACCATGAGAATATTGCTTGGCTTCAAATCACAATGTACTAATGGCAATTCACACTGGTTATGAAGATAATCCAAAGCAAATGCTACATCCAAGGCGATATTAATTCTCTGTCTTAAAGTCAGAACCTTTGTTTGACTACTATGTTCATGGGATTTTGGATGTAACCACATATCTAGATTCCCATTTGGAAAATATGGGAACACTATAGCCTTGAAGTCTGCCCCAGTTGAATCCACAGAAGAACATAGAGTAATAATTTTCACGAGATTTCGGGTGGCGGAC]
[+] EMBL AU093779 [CTGTCCAAGCAGCGGCANACGCGGGCGGCGCCACAACCAGGGCTTCCGCGACCATGAGAATATTGCTTGGCTTCAAATCACAATGTACTAATGGCAATTCACACTGGTTATGAAGATAATCCAAAGCAAATGCTACATCCAAGGCGATATTAATTCTCTGTCTTAAAGTCAGAACCTTTGTTTGACTACTATGTTCATGGGATTTTGGATGTAACCACATATCTAGATTCCCATTTGGAAAATATGGGAACACTATAGCCTTGAAGTCTGCCCCAGTTGAATCCACAGAAGAACATAGAGTAATAATTTTCACGAGATTTCGGGTGGCGGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14526#2 ----------CTGTGGTCCGCCCATCCACCCACCCGCGCACCCCGCCGGCGACAACGGCA 50
consensus_14526#3 --------------CAACAGACCGTAATGTCACTTATTAACGGCTGCGGCGCCGGCGGCG 46
consensus_14526#1 TACCAGGGCTTGACATGCCGCGAATCCTCTTGAAAGAGAGGGGTGCCCTCGGGAACGCGG 60
consensus_14526#0 --------------------CCCATCCACCCACCCGCGCACCCCGCCGGCGACAACGGCA 40
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ATCGCCATGGCTCGTCGGCGAATCGCCGCCCATGGTGAAAGCGCGGCGACCGGTTACCGG 110
consensus_14526#3 ATCCGC-CGCCTGCTCGTCGGGACACTGAGCATCC---AGCCGCTGCTAGTGATTGCGGC 102
consensus_14526#1 ACACAGGTGG-TGCATGGCTGTCGTCAGCTCGTGCCGTAAG-GTGTTGGGTTAAGTCTCG 118
consensus_14526#0 ATCGCCATGGCTCGTCGGCGAATCGCCGCCCATGGTGAAAGCGCGGCGACCGGTTACCGG 100
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 -----------------------------AAACAACACAAAAGCTACAAATACGTTCCAT 31
consensus_14526#2 CG--CAGTGCCAGCCGAGTGCTGGGGTTGCCGAGGTCCAAGCGGCGGCAGAAGG--CGGG 166
consensus_14526#3 TCTCCATCGGCAGCTCAGC-CTCCAGTTGCCGCCGTCAGCTGTCCTGCCGCCG---CTGC 158
consensus_14526#1 CAACGAGCGCAACCCTCGT-GTTTAGTTGCCGCCGTCAGCTGTCCTGCCGCCGCTGCCAT 177
consensus_14526#0 CG--CAGTGCCAGCCGAGTGCTGGGGTTGCCGAGGTCCAAGCGGCGGCAGAAGG--CGGG 156
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 TA--TATTATTCTTCCATACATGAAATTGCCAAATCTTAATTTGCCTCATTTGA--ACAC 87
consensus_14526#2 CGGCGC--TTGGGATTGGGAAGGAAGCGGGCC----------GTCGCGGCAACTAGGGCT 214
consensus_14526#3 CATCAA--CAATCCTCCTCCTCCGGCTGCACC----------ATCCCATGA--CAGTGAT 204
consensus_14526#1 CAACAA--TCCTCCTCCTCCTCCGGCTGCACC----------ATCCCATGA--CAGTGAT 223
consensus_14526#0 CGGCGC--TTGGGATTGGGAAGGAAGCGGGCC----------GTCGCGGCAACTAGGGCT 204
consensus_14526#5 ---CTG--TCCAAGCAGCGGCANACGCGGGCG----------G-CGCCACAACCAGGGCT 44
consensus_14526#4 TAACTACATTGGATTAGAAAACAAAACAAAAGCTACAAATATGTTACATTACATTATTCT 147
* * * *
consensus_14526#2 TCCGCGGCTAGGA------GGTATTCCACA--CACGCCTACTATTGACCCGATTCACAAC 266
consensus_14526#3 CGTGCT-CCACGG------GGTATTCCACA--CACGCCTACTATTGACCCGATTCACAAC 255
consensus_14526#1 CGTGCT-CCACGG------GGTATTCCACA--CACGCCTACTATTGACCCGATTCACAAC 274
consensus_14526#0 TCCGCGGCTAGGA-----GAATATTGCTTGGCTTCAAATCACAAT-GTACTAATGGCAAT 258
consensus_14526#5 TCCGCGACCATGA-----GAATATTGCTTGGCTTCAAATCACAAT-GTACTAATGGCAAT 98
consensus_14526#4 TCCATACATGAAATTGCCAAATCTTAATTTGCCTCATTTGACGCTCATGTTTGAGGCTGC 207
* ** * * * *
consensus_14526#2 CCTC-CTGATCCTCGACATCCTCCCCCAGGTCCCCCAGGTCCCCCATGACAATCCCAACC 325
consensus_14526#3 CCTC-CTGATCCTCGACATCCTCCCCCAGGTCCCCCA---------TGACAATCCCAACC 305
consensus_14526#1 CCTC-CTGATCCTCGACATCCTCCCCCAGGTCCCCCAGGTCCCCCATGACAATCCCAACC 333
consensus_14526#0 TCACACTGGTTATGAAGATAATCCAAAGCAAGTGCTACATCCAAGGCTA-TATTAATTCT 317
consensus_14526#5 TCACACTGGTTATGAAGATAATCCAAAGCAAATGCTACATCCAAGGCGA-TATTAATTCT 157
consensus_14526#4 ATGC-TTGATTCGAAGAATCATGTTAGAAACTTGCCCCATTTCTGGCCGCTCTCTAGGCA 266
* ** * ** * * * *
consensus_14526#2 CCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCG 385
consensus_14526#3 CCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCG 365
consensus_14526#1 CCGCCTCTGCGCGGTTGGGACAGAGAATAAAGACGTAGCCGGCGTCGTCGACCAGGGGCG 393
consensus_14526#0 TTGTCTT--AAAGTCAGCACCTTTGTTTGACTAATATGTTCATG----GGATTTTGGATG 371
consensus_14526#5 CTGTCTT--AAAGTCAGAACCTTTGTTTGACTACTATGTTCATG----GGATTTTGGATG 211
consensus_14526#4 ATGCCATTGAACATGAGAGGCCTATTTTAACCAATGGAATGACA----CACCTCTCCATT 322
* * * * * * *
consensus_14526#2 GAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAG 445
consensus_14526#3 GAAACAATTATGGGGCAGTAGGCCTTCAGCCTTATGCAGCGGCGGATCCAGAAAATAGAG 425
consensus_14526#1 GAAACAATTATGGNGCAGTAGGCCTTCAGCCTTATGCCAGCGCGGATCCAGAAAATAGAG 453
consensus_14526#0 TAACCACATATCTAGGTTCCCATTTGGAAAAT-ATGGGAACACTATAGCCTTGAAGTCTG 430
consensus_14526#5 TAACCACATATCTAGATTCCCATTTGGAAAAT-ATGGGAACACTATAGCCTTGAAGTCTG 270
consensus_14526#4 ACATCGGCTACACTGACATCATCTTGTAGCATTGTGGGATCAACAACCTCGTGAATGCTA 382
* * ** * * * * ** **
consensus_14526#2 TCAT------TGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTC 499
consensus_14526#3 TCAT------TGAGGTCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGTTTC 479
consensus_14526#1 TCAT------TTGNGGCACTACTCAAATATAGTGATGTCAATACATATAATTCTTGGTTC 507
consensus_14526#0 CCCCA----GTTGAATCCACAGAAGAGCATAGAGTAATAATTTTCACGAGATTTCGG-TG 485
consensus_14526#5 CCCCA----GTTGAATCCACAGAAGAACATAGAGTAATAATTTTCACGAGATTTCGGGTG 326
consensus_14526#4 TTGGACAATGCTGCATCAACAAATTCATGCAGGGTAGTGCCACCATTAAATTTTTCATCA 442
* * ** * * * * *
consensus_14526#2 TAGAGTGTATTAGCAAAGAGA-TTAGCGAGAAGTTATT-GGTGTCAGCTGAAA-TCAATG 556
consensus_14526#3 TAGAGTGTATTAGCAAAGAGA-TTAGCGAGAAGTTATT-GGTGTCAGCTGAAA-TCAATG 536
consensus_14526#1 TAGAGTGTATTAGCAAAGAGAATTAGCGAGAAGTNATTTGGTGTCAGCTGANNATCAATG 567
consensus_14526#0 GCGGACATTTTGTAGGGTTTCACACTCGGCAACAAAGC--TCTTATTAGATCCATGGATA 543
consensus_14526#5 GCGGAC------------------------------------------------------ 332
consensus_14526#4 ATAGGACTACTACCTGTTACCATTTCTAAGAGAAGGAT--TCCGAAGCTGTAGACATCAC 500
consensus_14526#2 CTT-ACACTATGGATCCGC-CACTGACCTTATGCCT-GGTTCCATAATCCTTAATTGCTC 613
consensus_14526#3 CTT-ACACTATGGATCCGC-CACTGACCTTATGCCT-GGTTCCATAATCCTTAATTGCTC 593
consensus_14526#1 CTTTACACTATGGATCCNNGCACTGACCTTATGCCNTGGTNNCATATNCNTNANTTCGTC 627
consensus_14526#0 TCAAGGTTAAAAATCTTGATGGCGATATGTTCTTCCTGAAGATGCAGATTGTCCTTTTCT 603
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 CCTTGGTTGAGATATCTTTGCTCATGCCATACTCTGGTGGAATATATCCAATAGATCCTT 560
consensus_14526#2 GTTATAATCTTAAAAATACC-ATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAG 672
consensus_14526#3 GTTATAATCTTAAAAATACC-ATGTAATTTATGGAAATATTTAAACTCCTATCAGTTCAG 652
consensus_14526#1 GT-ATAAATCTAAAAATACCCATGTA--TTATGGAAA-ATATTAACTC-TAT-AGTC--A 679
consensus_14526#0 TTGAAAGGAAGATGCAGATTGCCCTTATAAACTGTTCCAAATGATCCTGAGCCAAGTAAG 663
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 TTAGACAAGCCAAGCTTGTTGATGT-ATATTGATGTGCGTTTGATCTAGTGTATACAAAT 619
consensus_14526#2 CACTTGATGTGAAGATTTTCTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTT---CC 729
consensus_14526#3 CACTTGATGTGAAGATTTTTTAGCTCCGTCACTGATGAAGACAAAAGGTGACCTT---CC 709
consensus_14526#1 CACTTGATG----GAGATTCTAGCTCGTACTGTGAGACAANGGTACCCTCACTTCACGTC 735
consensus_14526#0 TTAGTTGAA-GAGAATCTATTTGTGGCCTTTAGAACATCTTCATACGTTATGTTCCTGTG 722
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 CTTGCTAAG-CCAAAGTCACTGACGTGTGCAACCATGTCACTATCCAACAGAATATTGCT 678
consensus_14526#2 ACTTCCCACGTCGCGT-CTGGTAGAAACCGTGGAAGAGGG-----ATATG-GAAGCGCCG 782
consensus_14526#3 ACTTCCCACGTCGCGT-CTGGTAGAAACCGTGGAAGAGGG-----ATATG-GAAGCGCCG 762
consensus_14526#1 GTCTGTNAAACCGTGN-GAGGTATTGACGGCNGCTATCCCCTCTCANATGAGAAACTCCG 794
consensus_14526#0 CTCATTCAGCTGTTGTACATGTGGCTCTGCTTGCATTCTCTTCGTCCAAATATATTTTGC 782
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 TGGCTTCAAATCACA---ATGTACTAATGGCAATTCACACTGGTTATGAAGATAATCCAA 735
consensus_14526#2 GC-CTAT-CCACTTCGTC--CAAGATGAGGAAACTCCCGTGATTTATATGCCATATA--T 836
consensus_14526#3 GC-CTAT-CCACTTCGTC--CAAGATGAGGAAACTCCCGTGATTTATATGCCATATATAT 818
consensus_14526#1 ATATTGC-CTAATGAACTGTCGATATTATTGGACGATGATAAAAAAAAAAAACTAGGGCC 853
consensus_14526#0 AAGGCATAACAAAGTGAAAGTGATAGCAACAATTGGTATTACTGTCGTTAGGACTAG--A 840
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 AGCAAGTGCTACATCCAAGGCTATATTAATTCTTTGTCTTAAAGTCAGCACCTTTGTTTG 795
consensus_14526#2 GTAAACTTGGTCCGATTTATATATATGTGGACAGTAATGTTATTAAAAAAAAAAGACTTG 896
consensus_14526#3 GTAAACTTGGTCCGATTTATAGATATGTGGACAGTAATGTTATTAATTA-------CTTG 871
consensus_14526#1 GCCAATNCCTTAAGTTTCCCCTCNGCGTNTACTGAAGAACTGTACATATCTTACCCCTTC 913
consensus_14526#0 ACCAATGACCTATGGTTCCTTTTCTTGTCAACCGATTTTGAACAAAGAGGCACACCTCTC 900
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ACTAATATGTTCATGGGATTTTGGATGTAACCACATATCTAGGTTC-------------- 841
consensus_14526#2 GGTGTTGGAGAGGCCAACATGAATCTAGCTGGGGAATTCCTAACGGGGGCAGCTGCGCCC 956
consensus_14526#3 GAAATTAAGGA------------------------------------------------- 882
consensus_14526#1 CNTGTNAAGAGGNNCNTCCATACCAAAGGAGGGAGGGGGACGGAGGGNGGGGCGGCCCCC 973
consensus_14526#0 ATTGGAGTTTTTGTGCACAGATAATCATTTCCTTCAATTGATACCACACTAGCATTGGCA 960
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 AAACTTGGTGAAAAAAAACAAAAAAAAAACTCGAGACTAGTTCTC--------------- 1001
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 TCCTCTCTTCCTCTCTAGATAGAGAAGAGAGAGTGTATCGTTTTATN------------- 1020
consensus_14526#0 AAAATACCACTGGTTGGCACTGCTCCATCAAAATTATTGAATGATAAGTTGAGAACTTGC 1020
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 AAAGAATGTAACAACGTTAGAAACTGTGGAATTTCTCCTGATAAATTGTTATGAGATATA 1080
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 TCCATCACCTTGATGCCTACCATGTTCACAAATGTTTGCGGAATGCTTCCTACAAAGAAA 1140
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 TTGCTTTGCATCTCAAGATACTCTAGAACCACGCATTGACTAAGAGTGGATGGGATATCT 1200
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 CCAGACAATCTGTTGTATGAAATGATGAGCTTATTCAGACTGACAAGGTTGCCTACTTCA 1260
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 TCTGATATGCTTCCGGACAAGTAATTGTATGACAAGTCTAACACTATTGAAAGTGAAGAA 1320
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 ATTTTAAAGATCGTCTCTGGTATTGTTCCATCTAGTGAATTGTGAGCAAGGTTGAGTATT 1380
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 TCGAGTTGAGTACAATACCCTATACTCACAGGTATGCTTCCACTCAAGTTGTTCCAATCC 1440
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 AAATTTAGATTATTCAGCTGAACAAGTTTCCCAATGTCATCTGGGATTTGACCAGAGAGT 1500
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 CTGTTTCGAGCAAAGGACAGTTTGCCTAATTTGCGCAAATTTCCGATTGTTAGAGGTATT 1560
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 TTTTCTGACAATTGATTGTAATCCATGTACAATTCAGTGAGGCTCTTAAGATTGCCTATC 1620
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 TCTTGTGGTATAGGTCCGGAAATTTTATTATTTGTTAGCCACAATCTTTGGAGATCACTA 1680
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 GACAGATTGCCTACAGAACTTGGCAGATTTCCTTGAAGATTGTTCCCATCCAACATCAGC 1740
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 TTAGTCAATCTTGTGCAATTTGAAAGTGACGAGATAAAGCCCCAGTCGCCTGCTTCTAGC 1800
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 ATGTTGTATGCCACGTCAAGATCCTCCAAGTTTGTCAGTGATCCAAAGGATGGCATGATC 1860
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 CCAGTTAACTTGTTGTCAGCTAGGTATAGCATTTGTAGATGGGTTAAATTGAGAAGGGAA 1920
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 GTTGGGATTGAGCCCTTAAACTTATTTGCTGAAAGAATTAAGCCTTCAATGTTTGGGAGT 1980
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 GTATAGCCGATGTCTAGAGGTAATCTTCCGGTGAGTGAGTTATTTGCCGCCACCAGAGAT 2040
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 GTCAGGGATGACATATTGAAGAGAGATGGTGGAACTGCTCCAGAAAAGTTGTTTAAATTC 2100
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 AAGTTCAATTCTTCTAGTGTTGGAATATGTCCTAAGCTCTCTGGTATGCTCCCATCTAAA 2160
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 CAATTCTGTGAAAGACGAAGATAAAGTAGGGAGGAAAGGTTCCCAACAGAGGAAGGTATT 2220
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 GTTCCTGTGAGACAGTTTTCTCCTAAATCAAGATATTGAACTTGTGGAGACACGGTTTTA 2280
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 ACAGGTGGTATAGAACCGGAAAAATTGTTCTGGTTGAGGTAAATGCTGATAAGTGACAAC 2340
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ------------------------------------------------------------
consensus_14526#3 ------------------------------------------------------------
consensus_14526#1 ------------------------------------------------------------
consensus_14526#0 GTGTTGAGTAGAGCCTTTGGGAGTTCTCCACTGAGACTATTGCTATTGAGAATGAGTTGT 2400
consensus_14526#5 ------------------------------------------------------------
consensus_14526#4 ------------------------------------------------------------
consensus_14526#2 ----
consensus_14526#3 ----
consensus_14526#1 ----
consensus_14526#0 TGCA 2404
consensus_14526#5 ----
consensus_14526#4 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||