These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14532#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1609 fasta sequence [CCCGGCCGACGCCGCGTCTACCCCATCCCCCCCCCCCCCCGCCCCCTCCTCGTCGGCGCCACCGCCGCCGCAGGCTCGCCGCCTAGGGTTCCTTCCACTCTCGGCGCAAGGGGCGTAGGGAGGTTGAGAGGGAGCGAGCGAGCGATGGAGGGGTGGGTGGCGACGGTCGCGTACACGGGCACGGCGCTGGCGTGCGCCGCGGCGGCGACGGTGGTGGCGCTGCGCCTCGTCTACCGCCACCTCCTCCACTACGCCGAGCCCACCCACCAGCGCTTCATCGTCCGCATCATCCTCATGGTCCCGGTATATGCTGTGATGTCATTTCTTTCCCTTGTACTACCTGGTAGCGCCATCTACTTCAACTCTATTCGCGAAATCTATGACGCATGGGTCATCTACAATTTCTTTTCACTCTGCTTGGCATGGGTAGGAGGTCCTGGTGCCGTGGTAGTAAGTTTGACTGGCCGATCTCTGAAACCGTCGTGGTTCATGATGACTTGCTGTTTTTCAGCTGTTCCTCTAGATGGGCGTTTTATACGGAGATGCAAACAGGGTTGTCTGCAGTTTGTGATCCTCAAGCCAATATTGGTTGTTATAACCTTCATTCTTTATGCCAAAGGAAAATATGAAGATGGAAATTTTAGTGTCAATCAATCCTATCTATACATAACTATCATCTACACAATTTCGTATTCGATGGCACTGTTTGCTCTAGCACTGTTCTACGTAGCATGCAGAGATCTTCTTCAGCCATATAATCCTGTTCCAAAATTTATCATTATCAAATCAGTGGTGTTCCTCACCTACTGGCAGGGCGTCCTGGTTTTCCTTGCTGCGAAA-TCTAGATTCATAAAAAATGCTGAAGAAGCTGCTTATCTCCAAAATTTTGTGCTTTGTGTTGAGATGCTCATAGCAGCTATTGGGCACCAATTTGCCTTCTCGTACAAGGAGTATGCTGGTTCCAATGCCCGTCCTTTCGGTGGATTCAGGGGAAGCCTTTTTCATGCTCTGAAATTCAATGACTTCTATCATGATACTGTGCACCAGTTTGCACCAACATATCATGAATATGTGCTCTACAGTAACGAGGAAGAGGATGAACCGACAAAATATAGCTCTGCCAGTGTTGTGTCAACAGTACAGGACATACAGCTGGTAGAAGTCTCTGTCGTGGACTCGAAAGCTCCGTTGGCATCAGTCATCCTAACACATGAGGCAGATAAAACAATGCCCTCCCATGGCATGGAAGAAACTGTTGCCCCTTCAGAGCCATACGACCTCTCAAACTTGGTTGATGTAGAACTGTCCAATTACTCTGCTGAGGTCCCTGCAATTCCTGATGTGGGGAAACAATGATATTGTGTGATATATATCCGTCAGATGTAAATGGGTAGCGCTCACGAGTTGTTCATAGATTACACTGTAAAGGTATCCTTGTAATCCTTTGTTTCTGCCAATTTTTCCCCGTTGCTAGGGACGTGCTGATATCTTTGGTTCAAATTGAGCTAAACTGACAGATTAGCTGATGGTGTCAAGTAAATTTGTAATGTAGGGAGAAGAGAATGTAACATGTTTCCCATTTTGTGTTNCTGATAAACCATGTCTGCAA] [+] EMBL AK068368 [CCCGGCCGACGCCGCGTCTACCCCATCCCCCCCCCCCCCCGCCCCCTCCTCGTCGGCGCCACCGCCGCCGCAGGCTCGCCGCCTAGGGTTCCTTCCACTCTCGGCGCAAGGGGCGTAGGGAGGTTGAGAGGGAGCGAGCGAGCGATGGAGGGGTGGGTGGCGACGGTCGCGTACACGGGCACGGCGCTGGCGTGCGCCGCGGCGGCGACGGTGGTGGCGCTGCGCCTCGTCTACCGCCACCTCCTCCACTACGCCGAGCCCACCCACCAGCGCTTCATCGTCCGCATCATCCTCATGGTCCCGGTATATGCTGTGATGTCATTTCTTTCCCTTGTACTACCTGGTAGCGCCATCTACTTCAACTCTATTCGCGAAATCTATGACGCATGGGTCATCTACAATTTCTTTTCACTCTGCTTGGCATGGGTAGGAGGTCCTGGTGCCGTGGTAGTAAGTTTGACTGGCCGATCTCTGAAACCGTCGTGGTTCATGATGACTTGCTGTTTTTCAGCTGTTCCTCTAGATGGGCGTTTTATACGGAGATGCAAACAGGGTTGTCTGCAGTTTGTGATCCTCAAGCCAATATTGGTTGTTATAACCTTCATTCTTTATGCCAAAGGAAAATATGAAGATGGAAATTTTAGTGTCAATCAATCCTATCTATACATAACTATCATCTACACAATTTCGTATTCGATGGCACTGTTTGCTCTAGCACTGTTCTACGTAGCATGCAGAGATCTTCTTCAGCCATATAATCCTGTTCCAAAATTTATCATTATCAAATCAGTGGTGTTCCTCACCTACTGGCAGGGCGTCCTGGTTTTCCTTGCTGCGAAA TCTAGATTCATAAAAAATGCTGAAGAAGCTGCTTATCTCCAAAATTTTGTGCTTTGTGTTGAGATGCTCATAGCAGCTATTGGGCACCAATTTGCCTTCTCGTACAAGGAGTATGCTGGTTCCAATGCCCGTCCTTTCGGTGGATTCAGGGGAAGCCTTTTTCATGCTCTGAAATTCAATGACTTCTATCATGATACTGTGCACCAGTTTGCACCAACATATCATGAATATGTGCTCTACAGTAACGAGGAAGAGGATGAACCGACAAAATATAGCTCTGCCAGTGTTGTGTCAACAGTACAGGACATACAGCTGGTAGAAGTCTCTGTCGTGGACTCGAAAGCTCCGTTGGCATCAGTCATCCTAACACATGAGGCAGATAAAACAATGCCCTCCCATGGCATGGAAGAAACTGTTGCCCCTTCAGAGCCATACGACCTCTCAAACTTGGTTGATGTAGAACTGTCCAATTACTCTGCTGAGGTCCCTGCAATTCCTGATGTGGGGAAACAATGATATTGTGTGATATATATCCGTCAGATGTAAATGGGTAGCGCTCACGAGTTGTTCATAGATTACACTGTAAAGGTATCCTTGTAATCCTTTGTTTCTGCCAATTTTTCCCCGTTGCTAGGGACGTGCTGATATCTTTGGTTCAAATTGAGCTAAACTGACAGATTAGCTGATGGTGTCAAGTAAATTTGTAATGTAGGGAGAAGAGAATGTAA ] [+] EMBL AF074726 [ CCTGGTGCCGTGGTAGTAAGTTTGACTGGCCGATCTCTGAAACCGTCATGGTTCATGATGACTTGCTGTTTTTCAGCTGTTCCTCTAGATGGGCGTTTTATACGGAGATGCAAACAGGGTTGTCTGCAGTTTGTGATCCTCAAGCCAATATTGGTTGTTATAACCTTCATTCTTTATGCCAAAGGAAAATATGAAGATGGAAATTTTAGTGTCAATCAATCCTATCTATACATAANTATNATCTACACAATTTCGTATTCGATGGCACTGTTTGCTCTAGCACTGTTCTACGTANCATGCAGAGATCTTCTTCAGCCATATAATCCTGTTCCAAAATTTATCATTATCAAATCAGTGGTGTTCCTCACCTACTGGCANGGCGTCCTGGTTTTCCTTGCTGCGAAANTCTAGATTCATAna ] [+] EMBL BQ908291 [ AGATTAAAC ATGCCCTCCCATGGCATGGAAGAAACTGTTGCCCCTTCAGAGCCATACGACCTCTC AACTTGGTTGATGTAGAACTGTCC ATTACTCTGCTGAGGTCCCT C ATTCCTGATGTGGGGAAAC ATGATATTGTGTGATATATATCCGTCAGATGTAAATGGGTAGCGCTCACGAGTTGTTCATAGATTACACTGTAAAGGTATCCTTGTAATCCTTTGTTTCT CC ATTTTTCCCCGTTGCTAGGGACGTGCTGATATCTTTGGTTC AATTGAGCTAAACTGACAGATTAGCTGATGGTGTCAAGTAAATTTGTAATGTAGGGAGAAGAGAATGTAACATGTTTCCCATTTTGTGTTNCTGATAAACCATGTCTGCAA] consensusID : consensus_14532#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1601 fasta sequence [CCTCCTCCTCCTCCTTCCCCAACCACTCGCAACCAAAGGCGCACCAAACCGGAGCCAATCCGAGCGCTCCGGCGGCGGAGGCGGCGGCGGCCGGACCTACTCGCTGCCGTGGGTGGGGGCTGGGAGGGAGCGGGCTGGTGGCTCGTCCCGTCCGCGATGGACTGGGCGGCGGCGGGGTACACGGCGGCGGCGCTGGTGTGCGCCGCGGCGGCCACCGTCATCGCGCTCGTGCACATCTACCGCCACCTCCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTCATGGTCCCGGTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATATATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATACGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCGGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTCCAGAACTTCGTATTGTGTGTTGAAATGCTCATAGCAGCTATTGGCCACCTATTTGCATTTCCTTACAACGAGTATGCTGGTCCCAATGGTCGACCTTCTGGTGATTTCAAGGGAAGCCTTCTGCATGCTCTGAAGTTCAATGATTTCTACCATGATACTGTTCATCAGTTTGCACCTACCTATAACGAATATGTGCTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGTGAGTACCGTGCCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACA-GTGCGGTGACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACA-ATGAGCACCCCA-ATCAAGGACAGAGTTGATAATGTAGGGC-TTTACGACCTG-ACAG-ACTTGC--TTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGACA-TTGTGATGGCCTTTGGCGGGTGGCAATCGGGGAAATCGTGTTTTCCG-TTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATTGAAAGTGAGTAATACCATATCTGCATTTACTGATGGCAAAAAAAAAA] [+] EMBL AK066888 [CCTCCTCCTCCTCCTTCCCCAACCACTCGCAACCAAAGGCGCACCAAACCGGAGCCAATCCGAGCGCTCCGGCGGCGGAGGCGGCGGCGGCCGGACCTACTCGCTGCCGTGGGTGGGGGCTGGGAGGGAGCGGGCTGGTGGCTCGTCCCGTCCGCGATGGACTGGGCGGCGGCGGGGTACACGGCGGCGGCGCTGGTGTGCGCCGCGGCGGCCACCGTCATCGCGCTCGTGCACATCTACCGCCACCTCCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTCATGGTCCCGGTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATATATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATACGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCGGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTCCAGAACTTCGTATTGTGTGTTGAAATGCTCATAGCAGCTATTGGCCACCTATTTGCATTTCCTTACAACGAGTATGCTGGTCCCAATGGTCGACCTTCTGGTGATTTCAAGGGAAGCCTTCTGCATGCTCTGAAGTTCAATGATTTCTACCATGATACTGTTCATCAGTTTGCACCTACCTATAACGAATATGTGCTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGTGAGTACCGTGCCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACA GTGCGGTGACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACA ATGAGCACCCCA ATCAAGGACAGAGTTGATAATGTAGGGC TTTACGACCTG ACAG ACTTGC TTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGACA TTGTGATGGCCTTTGGCGGGTGGCAATCGGGGAAATCGAGTTTTCCG TTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATTGAAAGTGAGTAATACCATATCTGCATT ] [+] EMBL AK104819 [ CTCCTCCTCCTCCTTCCCCAACCACTCGCAACCAAAGGCGCACCAAACCGGAGCCAATCCGAGCGCTCCGGCGGCGGAGGCGGCGGCGGCCGGACCTACTCGCTGCCGTGGGTGGGGGCTGGGAGGGAGCGGGCTGGTGGCTCGTCCCGTCCGCGATGGACTGGGCGGCGGCGGGGTACACGGCGGCGGCGCTGGTGTGCGCCGCGGCGGCCACCGTCATCGCGCTCGTGCACATCTACCGCCACCTCCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTCATGGTCCCGGTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATATATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATACGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCGGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTCCAGAACTTCGTATTGTGTGTTGAAATGCTCATAGCAGCTATTGGCCACCTATTTGCATTTCCTTACAACGAGTATGCTGGTCCCAATGGTCGACCTTCTGGTGATTTCAAGGGAAGCCTTCTGCATGCTCTGAAGTTCAATGATTTCTACCATGATACTGTTCATCAGTTTGCACCTACCTATAACGAATATGTGCTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGTGAGTACCGTGCCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACA GTGCGGTGACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACA ATGAGCACCCCA ATCAAGGACAGAGTTGATAATGTAGGGC TTTACGACCTG ACAG ACTTGC TTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGACA TTGTGATGGCCTTTGGCGGGTGGCAATCGGGGAAATCGTGTTTTCCG TTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATT ] [+] EMBL OSS2341A [ TCGCAACCAAAGGCGCACCAAACCGGAGCCAATCCGAGCGCTCCGGCGGCGGAGGCGGCGGCGGCCGGACCTACTCGCTGCCGTGGGTGGGGGCTGGGAGGGAGCGGGCTGGTGGCTCGTCCCGTCCGCNATGGACTGGGCGGCGGCGGGGTACACGGCGGCGGCGCTGGTGTGCGCCG GGCGGCCACCGTCATCGCGCTCGTGCACATCTACCGCCACCTNCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTCATGGTCCCGGTCTATGCCGTGATGTCGTTCCTTTC ] [+] EMBL CB666870 [ AAAGGCGCACCAAACCGGAGCCAATCCGAGCGCTCCGGCGGCGGAGGCGGCGGCGGCCGGACCTACTCGCTGCCGTGGGTGGGGGCTGGGAGGGAGCGGGCTGGTGGCTCGTCCCGTCCGCGATGGACTGGGCGGCGGCGGGGTACACGGCGGCGGCGCTGGTGTGCGCCGCGGCGGCCACCGTCATCGCGCTCGTGCACATCTACCGCCACCTCCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTCATGGTCCCGGTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATATATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATACGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCGGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTT ] [+] EMBL CB644357 [ AAAGGCGCACCAAACCGGAGCCAATCCGAGCGCTCCGGCGGCGGAGGCGGCGGCGGCCGGACCTACTCGCTGCCGTGGGTGGGGGCTGGGAGGGAGCGGGCTGGTGGCTCGTCCCGTCCGCGATGGACTGGGCGGCGGCGGGGTACACGGCGGCGGCGCTGGTGTGCGCCGCGGCGGCCACCGTCATCGCGCTCGTGCACATCTACCGCCACCTCCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTCATGGTCCCGGTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATATATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATACGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCGGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGC ] [+] EMBL CF310807 [ GTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATATATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATACGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCGGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTC ] [+] EMBL CF316553 [ ATAATTCAATATATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTTTGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTGAAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTTATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAACCTATTTTGGTGGTTATTACCTTCATACTTTATGCGAAAGGAAAATACGCAGATGGAAACTTTAGTGTCAAGCAATCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTTGCGGTGTTCTATGCGGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAG ] [-] EMBL CB666871 [ CCTGTCCCAAAATTCATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTCCAGAACTTCGTATTGTGTGTTGAAATGCTCATAGCAGCTATTGGCCACCTATTTGCATTTCCTTACAACGAGTATGCTGGTCCCAATGGTCGACCTTCTGGTGATTTCAAGGGAAGCCTTCTGCATGCTCTGAAGTTCAATGATTTCTACCATGATACTGTTCATCAGTTTGCACCTACCTATAACGAATATGTGCTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGTGAGTACCGTGCCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACA GTGCGGTGACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACA ATGAGCACCCCA ATCAAGGACAGAGTTGATAATGTAGGGC TTTACGACCTG ACAG ACTTGC TTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGACA TTGTGATGGCCTTTGGCGGGTGGCAATCGGGGAAATCGTGTTTTCCG TTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATTGAAAGTGAGTAATAC ] [-] EMBL CB644358 [ CATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCTGCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTCCAGAACTTCGTATTGTGTGTTGAAATGCTCATAGCAGCTATTGGCCACCTATTTGCATTTCCTTACAACGAGTATGCTGGTCCCAATGGTCGACCTTCTGGTGATTTCAAGGGAAGCCTTCTGCATGCTCTGAAGTTCAATGATTTCTACCATGATACTGTTCATCAGTTTGCACCTACCTATAACGAATATGTGCTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGTGAGTACCGTGCCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACA GTGCGGTGACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACA ATGAGCACCCCA ATCAAGGACAGAGTTGATAATGTAGGGC TTTACGACCTG ACAG ACTTGC TTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGACA TTGTGATGGCCTTTGGCGGGTGGCAATCGGGGAAATCGTGTTTTCCG TTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATTGAAAGTGAGTAATACCAaaaaaaaaa ] [-] EMBL CF310808 [ GCTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGTGAGTACCGTGCCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACA GTGCGGTGACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACA ATGAGCACCCCA ATCAAGGACAGAGTTGATAATGTAGGGC TTTACGACCTG ACAG ACTTGC TTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGACA TTGTGATGGCCTTTGGCGGGTGGCAATCGGGGAAATCGTGTTTTCCG TTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTTTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATTGAAAGTGAGTAATACCATATCTGCATTTACTGATGGCAAAAAAAAAA] [+] EMBL BI809932 [ ACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGCGAGTACCGTGCCATCC GGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACA GTGCGGTGACATCAAGCGTATCGTCAAACCA GCAGATCAGGAAGAAACACATGAGCACCCCACATCAAGGACAGAGTTGATAATGTAGGGC TTTACGACCTG ACAG ACTTGC TTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACCATGACACTTGTGATGGCCTTTGGCGGGTGGC ATCGGGGAAATCGTGTTTTCCG TTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATTGAAAGTGAGTAATACCATATCTGCATTTACTGATGGCCAAAAAAA ] [+] EMBL BM038634 [ GAAGTATCCTTCAGCGAGTACCGT CCATCC GGCGGGATGTAGAATTGTCT GCATCTCTGTGATGCCTGCGAACANGTGCGGTGACATCAAGCGTATCGTCAAACCA GCAGATCAGGAAGAAAC ATGAGCACCCC ATCAAGGACAGAGTTGATAATGTAGGGC TTTACGACCTG ACAG ACTTGC TTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAAC ATGAC TTGTGATGGCCTTTGGCGGGTGGC ATCGGGGAAATCGTGTTTTCCGCTTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATTGAAAGTGAGTAATACCATATCTGCATTTACTGATGGCAAAAAAA ] [+] EMBL AU086031 [ GGGCNTTTACGACCTGNACAGAACTTGCCTTTGATGTGGATTTGTCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGACA TTGTGAT GCCTTTGGCGGGTGGCAATCGGGGAAATCGTGTTTTCCG TTTGATCATAGATAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTCATGTCAGCACCTGTCTTACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTTGTGAGCTTAAAGTGAATTGAAAGTGAGTAATACCAaaaaa ] consensusID : consensus_14532#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [GGGAGCCAGCCCTCAAAGGAAGTATCCTTCAGTGAGTCCCGTCCCATCCGGGGGGGATGTAAAATTGTTTGGCATTTTTGTAAGGCCTGCGAACAGTGGGGTGACATCAAGGGTTTGGTCAACCCGGGCAGTTCAGGAAAAACCAATGGGCCCCCCAATCAAGGACAAAGTTGATAATGTAGGGTTTTACGCCCTGACAAACTTGCTTAATGTGGATTTGTTTAACTACCCAGCCAAGGTTCCTGCAATTTTTGATGTAAAAAACCAATGCCTTTGTGATGGCCTTTGGGGGGTGGCAATCGGGGAAATGGTGTTTTCCGTTTGATCAAAAAAAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGTTTTTCTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCA] [-] EMBL CF316552 [GGGAGCCAGCCCTCAAAGGAAGTATCCTTCAGTGAGTCCCGTCCCATCCGGGGGGGATGTAAAATTGTTTGGCATTTTTGTAAGGCCTGCGAACAGTGGGGTGACATCAAGGGTTTGGTCAACCCGGGCAGTTCAGGAAAAACCAATGGGCCCCCCAATCAAGGACAAAGTTGATAATGTAGGGTTTTACGCCCTGACAAACTTGCTTAATGTGGATTTGTTTAACTACCCAGCCAAGGTTCCTGCAATTTTTGATGTAAAAAACCAATGCCTTTGTGATGGCCTTTGGGGGGTGGCAATCGGGGAAATGGTGTTTTCCGTTTGATCAAAAAAAACGCTGTAAAAATGTGTGTATTACTTCCCATTGAAGGGAGTTTTTCTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14532#1 CCTCCTCCTCCTCCTTCCCCAACCACTCGCAACCAAAGGCGCACCAAACCGGAGCCAATC 60 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 ---------CCCGGCCGACGCCGCGTCTACCCCATCCCCCCCCCCCCCCGCCCCCTCCTC 51 consensus_14532#1 CGAGCGCTCCGGCGGCGGAGGCGGCGGCGGCCGGACCTACTCGCTGCCGTGGGTGGGGGC 120 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 GTCGGCGCCACCGCCGCCGCAGGCTCGCCGCCTAGGGTTCCTTCCACTCTCGGCGCAAGG 111 consensus_14532#1 TGGGAGGGAGCGGGCTGGTGGCTCGTCCCGTCCGCGATGGACTGGGCGGCGGCGGGGTAC 180 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 GGCGTAGGGAGGTTGAGAGGGAGCGAGCGAGCGATGGAGGGGTGGGTGGCGACGGTCGCG 171 consensus_14532#1 ACGGCGGCGGCGCTGGTGTGCGCCGCGGCGGCCACCGTCATCGCGCTCGTGCACATCTAC 240 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 TACACGGGCACGGCGCTGGCGTGCGCCGCGGCGGCGACGGTGGTGGCGCTGCGCCTCGTC 231 consensus_14532#1 CGCCACCTCCTCCACTACGCGGAGCCCATCTACCAGCGATTCATCGTCCGCCTCATCTTC 300 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 TACCGCCACCTCCTCCACTACGCCGAGCCCACCCACCAGCGCTTCATCGTCCGCATCATC 291 consensus_14532#1 ATGGTCCCGGTCTATGCCGTGATGTCGTTCCTTTCCCTTATCTTACCAGATAATTCAATA 360 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 CTCATGGTCCCGGTATATGCTGTGATGTCATTTCTTTCCCTTGTACTACCTGGTAGCGCC 351 consensus_14532#1 TATTTTAATTCTATTCGAGAGATTTATGATGCTTGGGTCATCTACAATTTCTTTTCACTT 420 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 ATCTACTTCAACTCTATTCGCGAAATCTATGACGCATGGGTCATCTACAATTTCTTTTCA 411 consensus_14532#1 TGCTTGGCATGGGTTGGAGGTCCTGGTGCTGTGGTGGTAAGTTTGAATGGGCGAACCCTG 480 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 CTCTGCTTGGCATGGGTAGGAGGTCCTGGTGCCGTGGTAGTAAGTTTGACTGGCCGATCT 471 consensus_14532#1 AAGCCATCGTGGTTTCTGATGACTTGCTGTTTTCCAGCTATTCCTCTAGATGGGCGTTTT 540 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 CTGAAACCGTCGTGGTTCATGATGACTTGCTGTTTTTCAGCTGTTCCTCTAGATGGGCGT 531 consensus_14532#1 ATTCGGAGATGCAAACAAGGCTGTTTGCAGTTTGTGATTCTTAAGCCTATTTTGGTGGTT 600 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 TTTATACGGAGATGCAAACAGGGTTGTCTGCAGTTTGTGATCCTCAAGCCAATATTGGTT 591 consensus_14532#1 ATTACCTTCATACTTTATGCGAAAGGAAAATACGCAGATGGAAACTTTAGTGTCAAGCAA 660 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 GTTATAACCTTCATTCTTTATGCCAAAGGAAAATATGAAGATGGAAATTTTAGTGTCAAT 651 consensus_14532#1 TCCTATCTATACATTACTATCATATATACAGTCTCATACTCAATGGCACTATATGCTCTT 720 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 CAATCCTATCTATACATAACTATCATCTACACAATTTCGTATTCGATGGCACTGTTTGCT 711 consensus_14532#1 GCGGTGTTCTATGCGGCATGCAGAGATCTGCTTCGGCCATATAATCCTGTCCCAAAATTC 780 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 CTAGCACTGTTCTACGTAGCATGCAGAGATCTTCTTCAGCCATATAATCCTGTTCCAAAA 771 consensus_14532#1 ATCATGATCAAATCAGTAGTGTTTCTCACATATTGGCAGGGTGTCCTGGTTTTCCTTGCT 840 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 TTTATCATTATCAAATCAGTGGTGTTCCTCACCTACTGGCAGGGCGTCCTGGTTTTCCTT 831 consensus_14532#1 GCAAAATCTCGGTTTATCAAAAATGCTGAAAAAGCTGCTGATCTCCAGAACTTCGTATTG 900 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 GCTGCGAAATCTAGATTCATAAAAAATGCTGAAGAAGCTGCTTATCTCCAAAATTTTGTG 891 consensus_14532#1 TGTGTTGAAATGCTCATAGCAGCTATTGGCCACCTATTTGCATTTCCTTACAACGAGTAT 960 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 CTTTGTGTTGAGATGCTCATAGCAGCTATTGGGCACCAATTTGCCTTCTCGTACAAGGAG 951 consensus_14532#1 GCTGGTCCCAATGGTCGACCTTCTGGTGATTTCAAGGGAAGCCTTCTGCATGCTCTGAAG 1020 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 TATGCTGGTTCCAATGCCCGTCCTTTCGGTGGATTCAGGGGAAGCCTTTTTCATGCTCTG 1011 consensus_14532#1 TTCAATGATTTCTACCATGATACTGTTCATCAGTTTGCACCTACCTATAACGAATATGTG 1080 consensus_14532#2 ------------------------------------------------------------ consensus_14532#0 AAATTCAATGACTTCTATCATGATACTGTGCACCAGTTTGCACCAACATATCATGAATAT 1071 consensus_14532#1 CTGTACAATCACAATGAGGGAGACAGCACTCAAAGGAAGTATCCTTCAGTGAGTACCGTG 1140 consensus_14532#2 -----------------GGGAGCCAGCCCTCAAAGGAAGTATCCTTCAGTGAGTCCCGTC 43 consensus_14532#0 GTGCTCTACAGTAACGAGGAAGAGGATGAACCGACAAAATATAGCTCTGCCAGTGTTGTG 1131 ** ** * * ** *** ** * *** ** consensus_14532#1 CCATCCGGGCGGGATGTAGAATTGTCTGGCATCTCTGTGATGCCTGCGAACAGTGCGGTG 1200 consensus_14532#2 CCATCCGGGGGGGATGTAAAATTGTTTGGCATTTTTGTAAGGCCTGCGAACAGTGGGGTG 103 consensus_14532#0 TCAACAGTACAGGACATACAGCTGGTAGAAGTCTCTGTCGTGGACTCGAAAGCTCCGTTG 1191 ** * * *** ** * ** * * * *** * **** * * ** consensus_14532#1 ACATCAAGCGTATCGTCAAACCAGGCAGATCAGGAAGAAACAATGAGCACCCCAATCAAG 1260 consensus_14532#2 ACATCAAGGGTTTGGTCAACCCGGGCAGTTCAGGAAAAACCAATGGGCCCCCCAATCAAG 163 consensus_14532#0 GCATCAGTCATCCTAACACATGAGGCAGAT------AAAACAATGCCCTCCCATGGCATG 1245 ***** * ** ***** * ** ***** * *** ** * consensus_14532#1 GACAGAGTTGATAA---TGTAGGGCTTTACGACCTGACAGACTTGCTTGATGTGGATTTG 1317 consensus_14532#2 GACAAAGTTGATAA---TGTAGGGTTTTACGCCCTGACAAACTTGCTTAATGTGGATTTG 220 consensus_14532#0 GAAGAAACTGTTGCCCCTTCAGAGCCATACGACCTCTCAAACTTGGTTGATGTAGAACTG 1305 ** * ** * * ** * **** *** ** ***** ** **** ** ** consensus_14532#1 TCTAACTACCCAGCCAAGGTTCCTGCAATCTCTGATGTAAGAAAACAATGACATTGTGAT 1377 consensus_14532#2 TTTAACTACCCAGCCAAGGTTCCTGCAATTTTTGATGTAAAAAACCAATGCCTTTGTGAT 280 consensus_14532#0 TCCAATTACTCTGCTGAGGTCCCTGCAATTCCTGATGTGGGGAAACAATGATATTGTG-T 1364 * ** *** * ** **** ******** ****** ** ***** ***** * consensus_14532#1 GGCCTTTGGCGGGTGGCAATCGGGGAAATCGTGTTTTCCGTTTGATCATAGATAACGCTG 1437 consensus_14532#2 GGCCTTTGGGGGGTGGCAATCGGGGAAATGGTGTTTTCCGTTTGATCAAAAAAAACGCTG 340 consensus_14532#0 GATATATATCCGTCAG-ATGTAAATGGGTAGCGCTCACGAGTTGTTCATAGATTACACTG 1423 * * * * * * * * * * * *** *** * * ** *** consensus_14532#1 TAAAAATGTGTGTATTACTTCCCATTGAAGGGAGCTATTC----ATGTCAGCACCTGTCT 1493 consensus_14532#2 TAAAAATGTGTGTATTACTTCCCATTGAAGGGAGTTTTTC----TTGTCAAAAAAAAAAA 396 consensus_14532#0 TAAAGGTATCCTTGTAATCCTTTGTTTCTGCCAATTTTTCCCCGTTGCTAGGGACGTGCT 1483 **** * * * * * ** * * * *** ** * consensus_14532#1 TACGGCCTCTCTGACTCGCTCTTTTCGCTAACTGTAAAATGTT-------GTGAGCTTAA 1546 consensus_14532#2 AAAA-------------------------AAAAAAAAAAAAAA-------AAAAAAAAAA 424 consensus_14532#0 GATATCTTTGGTTCAAATTGAGCTAAACTGACAGATTAGCTGATGGTGTCAAGTAAATTT 1543 * * * consensus_14532#1 AGTGAATTGAAAGTGAGTAATACCATATCTGCATTTACTGATGGCAAAAAAAAAA----- 1601 consensus_14532#2 AAAAAAAAAAAAAAAAACACTGTCA----------------------------------- 449 consensus_14532#0 GTAATGTAGGGAGAAGAGAATGTAACATGTTTCCCATTTTGTGTTNCTGATAAACCATGT 1603 * * * * consensus_14532#1 ------ consensus_14532#2 ------ consensus_14532#0 CTGCAA 1609 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||