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Oryza sativa
cluster # 14534 cluster # 14534       Sequences # 17       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14534#0 length = 823 sequences # 10  
consensus_14534#1 length = 749 sequences # 1  
consensus_14534#2 length = 699 sequences # 6  

consensusID : consensus_14534#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 823
fasta sequence
                              [AAGCAGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAGACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACT-CCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGTTGAGG-TGTTGGAGG--TTAAGA-GC-AGGG-TGG-GCAACCTCAAG-TCGCAC-TC-GA-CGGAGA-CGAAGCTCGAGGCCACCGGC-GACGCCAC-CTGCGTGGC-CAAGCT-CACGGTGGAGTACGAGCT-CGAAGACGGC--GCCTCGCTGTCGCCGGAG-CAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTATTGTGTTTTTGCTTCACGAGTGAATAAAATACACATAAG-A-ATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGTAAAAGTAGATTAGAAATATAATAATATTTGTGAGTTTATTTGATTACGGAGGTTATCTGTACTTTTTATAAAGTTATAACACTAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK099157             [AAGCAGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAGACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACT CCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGTTGAGG TGTTGGAGG  TTAAGA GC AGGG TGG GCAACCTCAAG TCGCAC TC GA CGGAGA CGAAGCTCGAGGCCACCGGC GACGCCAC CTGCGTGGC CAAGCT CACGGTGGAGTACGAGCT CGAAGACGGC  GCCTCGCTGTCGCCGGAG CAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAGTAATTTCAGTATTGTGTTTTTGCTTCACGAGTGAATAAAATACACATAAG A ATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGTAAAAGTAGATTAGAAATATAATAATATTTGTGAGTTTATTTGATTACGGAGGTTATCTGTACTTTTTATAAAG                                   ]
[+] EMBL AK070762             [AAGCAGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAGACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACT CCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGTTGAGG TGTTGGAGG  TTAAGA GC AGGG TGG GCAACCTCAAG TCGCAC TC GA CGGAGA CGAAGCTCGAGGCCACCGGC GACGCCAC CTGCGTGGC CAAGCT CACGGTGGAGTACGAGCT CGAAGACGGC  GCCTCGCTGTCGCCGGAG CAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAGTAATTTCAGTATTGTGTTTTTGCTTCACGAGTGAATAAAATACACATAAG A ATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGTAAAAGTAGATTAGAAATATAATAATATTTGTGAGTTTATTTGATTACGGAGGTTATCTGTACTTTTTATAAAG                                   ]
[+] EMBL CB000577             [               GCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACT CCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGTTGAGG TGTTGGAGG  TTAAGA GC AGGG TGG GCAACCTCAAG TCGCAC TC GA CGGAGA CGAAGCTCGAGGCCACCGGC GACGCCAC CTGCGTGGC CAAGCT CACGGTGGAGTACGAGCT CGAAGACGGC  GCCTCGCTGTCGCCGGAG CAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAACAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTATT                                                                                                                                                                                                     ]
[+] EMBL CA755132             [               GCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACT CCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCTTAACCCTGCCGCGGACGCAGGGAGCGTATACNAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGTTGAGG TGTTGGAGG  TTAAGA GC AGGG TGG GCAACCTCAAG TCGCAC TC GA CGGAGA CGAAGCTCGAGGCCACCGGC GACGCCGC CTGCGTGGC CAAGCT CACGGTGGAGTACGAGCT CGAAGACGGC  GCCTCGCTGTCGCCGGAG CAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAAGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCT AAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAA AATTATTCTGGGGTTGAGGTTATGT                                                                                                                                                                                                                    ]
[+] EMBL BI810075             [                                                                                                      cctccgtTCGGTGGAGA GCTGTGGAA GTCTGCTTGGACGTGCACTCCCCTGCCC AGGTCTGC CCGGATTCATCGAC CCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCCAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGG TGTTGGAGG  TTAAGA GC AGGG TGG GCAACCTCAAG TCGCAC TC GA CGGAGA CGAAGCTCGAGGCCACCGGC GACGCCAC CTGCGTGGC CAAGCT CACGGTGGAGTACGAGCT CCAAGACGGC  GCCTCGCTGTCGCCGGAG CAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTATTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAG A ATGTGTTGTGTTTaaaaaaa                                                                                                                                         ]
[+] EMBL BM038310             [                                                                                                                                                                                                                                             cCCCTTCC CGGACGCAGGGAGCGTATACAAGACC AAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGG TGTTGGAGG  TTAAGA GC AGGG TGG GCAACCTCAAG TCGCAC TCTGA CGGAGA CGAAGCTCGAGGCCACC GC GACGCCAC CTGCGTGGC CAAGCT CACGGTGGAGTACGAGCT CCAAGACGGC  GCCTCGCTGTCGCCGGAG CAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTATTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAG ANCNGTCTTGTGTTTGATGGTTAAaaaa                                                                                                                                   ]
[+] EMBL BI809018             [                                                                                                                                                                                                                                                                                                                          GAGGTTCTTGGATGTCTTAAGACGCAAGGGTTGGCGCAACCTCAAGTTCGCACGTC GACCGGAGACCGAAGCTCGAGGCCACCGGCTGACGCCACACTGCGTGCCACAAGCTCCACGGTGGAGTACGAGCTCCCAAGACGGCGAGCCTCGCTGTCGCCGGAGCCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTATTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGCA ATGTGTTGTGTTTGATGGTTAAaaaaa                                                                                                                                  ]
[+] EMBL AU162395             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTATTGTGTTTTTGCTTCACGAGTGAATAAAATACACATAAG A ATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGTAAAAGTAGATTAGAAATATAATAATATTTGTGAGTTTATTTGATTACGGAGGTTATCTGTACTTTTTATAAAGTTATAACACTAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL AW070054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ggcagGTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTATTGTGTTTTTGCTTCACGAGTGAATAAAATACACATAAG A ATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGTAAAAGTAGATTAGAAATATAATAATATTTGTGAGTTTATTTGATTACGGAGG                                                        ]
[+] EMBL BI798402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAG A ATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGACCCGTGTAAAAGTAGATTAGAAATATAATAATATTTGTGAGTTTATTTGATTAaaaa                                                          ]


>consensus_14534#0 AAGCAGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAGACTAGCTTA GATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTGGAGAG GCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGA CGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCTTAACCC TGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCA CGTGCTAAAGGTTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTC GACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGA GTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGG CTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGC CTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTATTCTGTG TTTAAGGTTATGTAATAATTTCAGTATTGTGTTTTTGCTTCACGAGTGAATAAAATACAC ATAAGAATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGTAAAAG TAGATTAGAAATATAATAATATTTGTGAGTTTATTTGATTACGGAGGTTATCTGTACTTT TTATAAAGTTATAACACTAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_14534#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 749
fasta sequence
                              [AAGCAAAAGCAGCTGAGCTGAGCTAGCTATAGCCTCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCCTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGGTATGTAATAATTTCAGTACTGTGNTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGNGGTTTGATGGTTAATATATATGGAAGATTGNGGATCAGGGTTAAAAGTAGGATTAGAAATATAATAATATTTTGGGAGTTTATTTGGATT]

[+] EMBL CB096981             [AAGCAAAAGCAGCTGAGCTGAGCTAGCTATAGCCTCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCCTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGGTATGTAATAATTTCAGTACTGTGNTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGNGGTTTGATGGTTAATATATATGGAAGATTGNGGATCAGGGTTAAAAGTAGGATTAGAAATATAATAATATTTTGGGAGTTTATTTGGATT]


>consensus_14534#1 AAGCAAAAGCAGCTGAGCTGAGCTAGCTATAGCCTCACAGCAAGTGTCAGGTGGAAACTA GCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGTG GAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTC ATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCCT AACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCA ACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCG CACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACG GTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTC GACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAG TACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGGTATGTAAT AATTTCAGTACTGTGNTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGNG GTTTGATGGTTAATATATATGGAAGATTGNGGATCAGGGTTAAAAGTAGGATTAGAAATA TAATAATATTTTGGGAGTTTATTTGGATT



consensusID : consensus_14534#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 699
fasta sequence
                              [TCGGCACGAGGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACAAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGT]

[-] EMBL CB629257             [TCGGCACGAGGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACAAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGTGTTTGAAGGTTAATATATATGGAAGATTGTGGATCAGTGT]
[-] EMBL CB629255             [            TGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACAAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGT]
[-] EMBL CB629213             [            TGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACAAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTG         ]
[+] EMBL CB629212             [                    GCTACCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACAAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGTGGAT      ]
[+] EMBL CB629256             [                    GCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTAGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACAAGCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGT          ]
[+] EMBL CB629254             [                                          AGTGTCAGGTGGAAACTATCTTATATAGAGATGGCTCCGGCCTTCGTCTCCGACAACCGCGCCGTCGCGGTGTCGGTGGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTCATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACTTAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCAACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCGCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACGGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTCGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAGTACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAATAATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGTGTTTGATGGTTAATATATATGGAAGATTGT          ]


>consensus_14534#2 TCGGCACGAGGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACTA GCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACAAGCGCGCCGTCGCGGTGTCGGTG GAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATTC ATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACTT AACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGCA ACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTCG CACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCACG GTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGTC GACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGAG TACGCCTAAAAATATTGTGGGCATGTGAGAAGAATTATTCTGTGTTTAAGGTTATGTAAT AATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAAATACACATAAGAATGTGTTGTG TTTGATGGTTAATATATATGGAAGATTGTGGATCAGTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14534#0      ------AAGCAGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAGACT 54
consensus_14534#2      -TCGGCACGAGGCTGAGCTGAGCTAGCTATAGCCATCACAGCAAGTGTCAGGTGGAAACT 59
consensus_14534#1      AAGCAAAAGCAGCTGAGCTGAGCTAGCTATAGCC-TCACAGCAAGTGTCAGGTGGAAACT 59
                             * *  *********************** ********************* ***

consensus_14534#0      AGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGT 114
consensus_14534#2      AGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACAAGCGCGCCGTCGCGGTGTCGGT 119
consensus_14534#1      AGCTTAGATAGAGATGGCTCCGGCCTTCGTCTCCGACGAGCGCGCCGTCGCGGTGTCGGT 119
                       ************************************* **********************

consensus_14534#0      GGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATT 174
consensus_14534#2      GGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATT 179
consensus_14534#1      GGAGAGGCTGTGGAAGGTCTGCTTGGACGTGCACTCCCTGCCCAAGGTCTGCGCCGGATT 179
                       ************************************************************

consensus_14534#0      CATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCT 234
consensus_14534#2      CATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAACT 239
consensus_14534#1      CATCGACGCCGTCGAGGTCGAGGGGAATGGCGGGCCGGGCACCATCCACATCATGAAGCC 239
                       ********************************************************* * 

consensus_14534#0      TAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGC 294
consensus_14534#2      TAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGC 299
consensus_14534#1      TAACCCTGCCGCGGACGCAGGGAGCGTATACAAGACCAAAATAGTGGTGTGCGACAGCGC 299
                       ************************************************************

consensus_14534#0      AACTCACGTGCTAAAGGTTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTC 354
consensus_14534#2      AACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTC 359
consensus_14534#1      AACTCACGTGCTAAAGGCTGAGGTGTTGGAGGTTAAGAGCAGGGTGGGCAACCTCAAGTC 359
                       ***************** ******************************************

consensus_14534#0      GCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCAC 414
consensus_14534#2      GCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCAC 419
consensus_14534#1      GCACTCGACGGAGACGAAGCTCGAGGCCACCGGCGACGCCACCTGCGTGGCCAAGCTCAC 419
                       ************************************************************

consensus_14534#0      GGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGT 474
consensus_14534#2      GGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGT 479
consensus_14534#1      GGTGGAGTACGAGCTCGAAGACGGCGCCTCGCTGTCGCCGGAGCAGGAGAAGATGATCGT 479
                       ************************************************************

consensus_14534#0      CGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGA 534
consensus_14534#2      CGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGA 539
consensus_14534#1      CGACGGCTACTTCAGCATGCTCCAGATGATCGAGGCGTACCTCGTCGCTCACCCTGCTGA 539
                       ************************************************************

consensus_14534#0      GTACGCCTAAAAATATTGTGGTCATGTTACTGTGGCGTGGTCGCATGTGAGAAGAATTAT 594
consensus_14534#2      GTACGCCTAAAAATATTGTGG---------------------GCATGTGAGAAGAATTAT 578
consensus_14534#1      GTACGCCTAAAAATATTGTGG---------------------GCATGTGAGAAGAATTAT 578
                       *********************                     ******************

consensus_14534#0      TCTGTGTTTAAGGTTATGTAATAATTTCAGTATTGTGTTTTTGCTTCACGAGTGAATAAA 654
consensus_14534#2      TCTGTGTTTAAGGTTATGTAATAATTTCAGTACTGTGTTTTTGCTTCATGAGTGAATAAA 638
consensus_14534#1      TCTGTGTTTAAGGGTATGTAATAATTTCAGTACTGTGNTTTTGCTTCATGAGTGAATAAA 638
                       ************* ****************** **** ********** ***********

consensus_14534#0      ATACACATAAGAATGTGTTGTG-TTTGATGGTTAATATATATGGAAGATTGTGGATCAGT 713
consensus_14534#2      ATACACATAAGAATGTGTTGTG-TTTGATGGTTAATATATATGGAAGATTGTGGATCAGT 697
consensus_14534#1      ATACACATAAGAATGTGTTGNGGTTTGATGGTTAATATATATGGAAGATTGNGGATCAGG 698
                       ******************** * **************************** ******* 

consensus_14534#0      GTAAAAGT--AGATTAGAAATATAATAATATTT-GTGAGTTTATTTGATTACGGAGGTTA 770
consensus_14534#2      GT---------------------------------------------------------- 699
consensus_14534#1      GTTAAAAGTAGGATTAGAAATATAATAATATTTTGGGAGTTTATTTGGATT--------- 749
                       **                                                          

consensus_14534#0      TCTGTACTTTTTATAAAGTTATAACACTAAAAAAAAAAAAAAAAAAAAAAAAA 823
consensus_14534#2      -----------------------------------------------------
consensus_14534#1      -----------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)