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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14566#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGGGAGAAAAAAAACTTCCTTTTAAAAAAAGTTTCACCTTGTTTTTTCCTTGGGTTCCCTTTTAGCCCGGGGCCCCATTAAAAAGGGGGGGCGGGGTTCCTTCCAAATTTCCTTCCCAATACCCCCCCCCCTTTCAAAGCCTTCTCTTTAATCCCTTGTAAGGGCCCAGGGGCAAATTCTTTAAACCCGGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCAAACCGGTTCCCGGGGGAAAATTGTTTTCCCCTCACATTTCCCCCCAAAATACAACCCGGAACCTTAAAGGGAAAACCCGGGGGGGCCTAAGGGGGGACCTACCCCCCTTTATTGGGGTGGCCCCCCCTG]
[+] EMBL CF310749 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGGGAGAAAAAAAACTTCCTTTTAAAAAAAGTTTCACCTTGTTTTTTCCTTGGGTTCCCTTTTAGCCCGGGGCCCCATTAAAAAGGGGGGGCGGGGTTCCTTCCAAATTTCCTTCCCAATACCCCCCCCCCTTTCAAAGCCTTCTCTTTAATCCCTTGTAAGGGCCCAGGGGCAAATTCTTTAAACCCGGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCAAACCGGTTCCCGGGGGAAAATTGTTTTCCCCTCACATTTCCCCCCAAAATACAACCCGGAACCTTAAAGGGAAAACCCGGGGGGGCCTAAGGGGGGACCTACCCCCCTTTATTGGGGTGGCCCCCCCTG]
consensusID : consensus_14566#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 409 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTAAAGGAGAAATGCTTGAAAAGGCAATCCTTTTTCATTTTGTTGACCGGGGGGGGGGCCCATACTAAACAAACCTGTAAAGGGCCCGGGGGAAAAAAAAATTGGAATTGTTCCCCCCAAGGCCAAACAAAAAAAAAACCATGGGGGGGGGCCCCAAAATGCATTTTTACCCCTTCAACCCATGTAAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTATCCCCTTTAAGGGGGGTTAATTTTGACCTTGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAATTGTTTCCCCCTCACAATTCCCCAAAAAATACAACCCGGAAACATAAAGGGTA]
[+] EMBL CF298466 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTAAAGGAGAAATGCTTGAAAAGGCAATCCTTTTTCATTTTGTTGACCGGGGGGGGGGCCCATACTAAACAAACCTGTAAAGGGCCCGGGGGAAAAAAAAATTGGAATTGTTCCCCCCAAGGCCAAACAAAAAAAAAACCATGGGGGGGGGCCCCAAAATGCATTTTTACCCCTTCAACCCATGTAAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTATCCCCTTTAAGGGGGGTTAATTTTGACCTTGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAATTGTTTCCCCCTCACAATTCCCCAAAAAATACAACCCGGAAACATAAAGGGTA]
consensusID : consensus_14566#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 407 fasta sequence
[GATACGTATAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATGTCAGGGCCCAGGGGCAAATTCTTTAAACCCCGCAAAACTTCCCCCTTTAGGGGGGGTAAATTCTGACCTGGGCGAAAACAGGGAAAAACCTGTTCCCTGGGAAAAATTGTTACCCCCTCAAAATTCCACAAAAAATACAACCCGAAAACAAAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTATTGGGGGGGCCCCCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGCCCCACCTGTATAAAAAAATCCCCCACCCCCCGGGGAAAGGCGGTTTGCTTATGG]
[+] EMBL CF318732 [GATACGTATAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATGTCAGGGCCCAGGGGCAAATTCTTTAAACCCCGCAAAACTTCCCCCTTTAGGGGGGGTAAATTCTGACCTGGGCGAAAACAGGGAAAAACCTGTTCCCTGGGAAAAATTGTTACCCCCTCAAAATTCCACAAAAAATACAACCCGAAAACAAAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTATTGGGGGGGCCCCCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGCCCCACCTGTATAAAAAAATCCCCCACCCCCCGGGGAAAGGCGGTTTGCTTATGG]
consensusID : consensus_14566#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 401 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAA-AAAAAGGGCCCCCCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTTTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGCGAAAACAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCCCAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCCAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGGCCCCCCTGCTTTAATAAATCCCCCCCCCCCCGGGGAAAGGCGGTTTGCTTTTGGGGCCCT]
[+] EMBL CF314663 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAA AAAAAGGGCCCCCCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTTTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGCGAAAACAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCCCAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCCAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCACTG ]
[+] EMBL CF311039 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAACCAAAATTTTCCTCCCCCTTCACCCCATGTCAGGGCCCAGGGGCAAATTCTTTAAACCCCGCGGGACTTCCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGGCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCCCAAAATACAACCCGGAACCATAAAGGGTAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGGCCCCCCTGCTTTAATAAATCCCCCCCCCCCCGGGGAAAGGCGGTTTGCTTTTGGGGCCCT]
consensusID : consensus_14566#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 389 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCCCCCTTCACCCCTTGTCAGGGCCCAAGGGCAAATTTTTTAAACCCCGCGGGACTTCCCCCTTTAGGGGGGGTAAATTTTAACCTGGGGGAAATCAGGGCCAAACCTGTTCCCTGGGAAAAATTGTAACCCCCTCACAATTCCCCCCAAATTCCAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTAATGGGGTGGCCCCCACTGCCCCTTTTCCAATGGGAAAACCTGTCGGCCCACCTGCATAAAAAAATCCCCCACCCCCCGGGGAAAGGCGGTTTGCTTATGGGGCCCTT]
[+] EMBL CF298776 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTCCCCCTTCACCCCTTGTCAGGGCCCAAGGGCAAATTTTTTAAACCCCGCGGGACTTCCCCCTTTAGGGGGGGTAAATTTTAACCTGGGGGAAATCAGGGCCAAACCTGTTCCCTGGGAAAAATTGTAACCCCCTCACAATTCCCCCCAAATTCCAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACC ]
[+] EMBL CF329653 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTCTTTAAAACCGGCGGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGCGAAATCAGGGCCAAACCTGTTCCCTGGGGAAAATGGTTACCCCCTCACAATTCCCCACAAAATACAACCCGGAACCAAAAAGGGTAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCACATTAATGGGGTGGCCCCCACTGCCCCTTTTCCAATGGGAAAACCTGTCGGCCCACCTGCATAAAAAAATCCCCCACCCCCCGGGGAAAGGCGGTTTGCTTATGGGGCCCTT]
consensusID : consensus_14566#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 371 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAACCCCCTTAAAAAATTGAACCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTAACCCCTTTAGGGGGGGGAAATTCTGACCTGGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAAAACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCACATTAATGGGGGGGCCCCCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGGCCCCCTGCATTAAAAAATCCCCCAACC]
[+] EMBL CF327916 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAACCCCCTTAAAAAATTGAACCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTAACCCCTTTAGGGGGGGGAAATTCTGACCTGGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAAAACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCACATTAATGGGGGGGCCCCCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGGCCCCCTGCATTAAAAAATCCCCCAACC]
consensusID : consensus_14566#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 353 fasta sequence
[ACGCCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGGGGAGGGGGAATGGGAAAAAAAAAATATCCCCCTTCACCCCTTGTCAGGGCCCAGGGGCAAATTTTTTAAACCCGGCGGGACTTCCCCTTTTAGGGGGGGTAAATTTTGACCTGGGGGAAATCAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCCACCCCCCTTTATTGGGGTGGCCCCCAC]
[+] EMBL CF318671 [ACGCCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAGGGGAGGGGGAATGGGAAAAAAAAAATATCCCCCTTCACCCCTTGTCAGGGCCCAGGGGCAAATTTTTTAAACCCGGCGGGACTTCCCCTTTTAGGGGGGGTAAATTTTGACCTGGGGGAAATCAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCCACCCCCCTTTATTGGGGTGGCCCCCAC]
consensusID : consensus_14566#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 353 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA---CCCCCTCACCCCATGTCAGGGGCCAAGGGCAAATTCTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGGTAATTCTGACCTGGGGGAAAAAAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCCCATTAATTGGGGGGCCCCCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGCCCCCCTGAATTAAAAAATCCCCCCCCC]
[+] EMBL CF299444 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA CCCCCTCACCCCATGTCAGGGGCCAAGGGCAAATTCTTTAAAACCCGCAGGACTAACCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAAAAAGGGGCAAAACTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCAAAAAGGGTAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCCCATTAATTGCGGGGCCCCCACTG ]
[+] EMBL CF318708 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA CCCCCTCACCCCAT TCAGGGGCCAAGGGCAAATTCTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGGAAATTCTGACCTGGGGGAAAAAAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTACCCCCTCAAAATTCCACAAAAAAAACAACCCGGAAACAAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCACCCCCCATTAATGGGGGGGCCCCCACTG ]
[+] EMBL CF330886 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACCCCCCCCTCACCCCATGGCAGGGCCCAAGGGCAAATTCTTTAAAACCCGCAGGACTACCCCCTTTAGGGGGGGGTAATTCTGACCTGGGGGAAAAAAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCCAAAGAGGGACCCAACCCACATTAATTGGGGGGCCCCCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGCCCCCCTGAATTAAAAAATCCCCCCCCC]
consensusID : consensus_14566#8 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 350 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGAAAAGGGTTAATTAACATAGGGGCCCCCCAAAAAATAACAAAAAAAATTTTTACCCCTTCAACCCATGTCAGGGCCCAAGGGCAAATTCTTTTAAACCCGCAGGACTAACCCCTTTAAGGGGGGGTAATTTTGACCTTGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCCCAAAATACAACCCGGAAACAAAAAGGGTAAACCCCGGGGGGCCCAAAGAGGGGCCCACCCCCCATTAATTGGGTTGCCCCCACTG]
[+] EMBL CF310378 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGAAAAGGGTTAATTAACATAGGGGCCCCCCAAAAAATAACAAAAAAAATTTTTACCCCTTCAACCCATGTCAGGGCCCAAGGGCAAATTCTTTTAAACCCGCAGGACTAACCCCTTTAAGGGGGGGTAATTTTGACCTTGGGGAAAACAGGGGCAAAACTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCCCAAAATACAACCCGGAAACAAAAAGGGTAAACCCCGGGGGGCCCAAAGAGGGGCCCACCCCCCATTAATTGGGTTGCCCCCACTG]
consensusID : consensus_14566#9 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 338 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAAAAAAAACCCAAGGGGCCAATTTTGTTTTTAAAATTTGGGGGTTGGCCTACAAAACTTTACTCTTTAAACCCTTGTAAGGGCCCAGGGGCAATTTCTTTAAACCCTGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCATACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCACAAATTACAACCCGGAACCTTAAAGGGTAAACCCGGGGGGCCCTAAGGAGGGACCTAC]
[+] EMBL CF328251 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCAAAAAAAACCCAAGGGGCCAATTTTGTTTTTAAAATTTGGGGGTTGGCCTACAAAACTTTACTCTTTAAACCCTTGTAAGGGCCCAGGGGCAATTTCTTTAAACCCTGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCATACCTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCACAAATTACAACCCGGAACCTTAAAGGGTAAACCCGGGGGGCCCTAAGGAGGGACCTAC]
consensusID : consensus_14566#10 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 333 fasta sequence
[TCGCTACGTAACGGCATGACCGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATTTCAGGGCCCAAGGGCAAATTCTTTAAACCCCGCAGAACTACCCCCTTTAAGGAGGGTAAATTCTAACCTTGGCGAAAAAATGGCCAAACCTGTTCCCTGGGAAAAATTGTTTCCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCTTTAATTGGGTGGCCCCCACTG]
[+] EMBL CF314894 [TCGCTACGTAACGGCATGACCGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAACCCCTTCACCCCATTTCAGGGCCCAAGGGCAAATTCTTTAAACCCCGCAGAACTACCCCCTTTAAGGAGGGTAAATTCTAACCTTGGCGAAAAAATGGCCAAACCTGTTCCCTGGGAAAAATTGTTTCCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACCATAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCTTTAATTGGGTGGCCCCCACTG]
consensusID : consensus_14566#11 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 311 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGACAACAAAATTAAATTTTTACCCCTTCAACCCATGTCAAGGGCCAAGGGCAAATTTTTTTAAACCCGCAGGACTTTCCCCTTTAAGGGGGGGTAATTTTGAACTTGGGGTAAACAGGGGCAAAACTGTTTCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAATACAACCCGGAAACATAAAGGGTAAACCCCGGGGGGCCTAATGAGGGACCCAACCCCCATTAATTGGGTTGCCCCCACTG]
[+] EMBL CF334155 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGACAACAAAATTAAATTTTTACCCCTTCAACCCATGTCAAGGGCCAAGGGCAAATTTTTTTAAACCCGCAGGACTTTCCCCTTTAAGGGGGGGTAATTTTGAACTTGGGGTAAACAGGGGCAAAACTGTTTCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAATACAACCCGGAAACATAAAGGGTAAACCCCGGGGGGCCTAATGAGGGACCCAACCCCCATTAATTGGGTTGCCCCCACTG]
consensusID : consensus_14566#12 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAAACTTTTTTTTTCCCCCTTCACCCCATGTAAGGGCCCAAGGGCAAATTCTTTAAACCCCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGGGAAAACAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTACCCCCTCAAAATTCCCCACAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCAC]
[+] EMBL CF317082 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAAACTTTTTTTTTCCCCCTTCACCCCATGTAAGGGCCCAAGGGCAAATTCTTTAAACCCCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGGGAAAACAGGGCCAAACCTGTTCCCTGGGGAAAATTGTTACCCCCTCAAAATTCCCCACAAAATACAACCCGGAACCAAAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCCCCAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14566#5 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36
consensus_14566#7 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36
consensus_14566#3 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36
consensus_14566#4 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36
consensus_14566#2 GATACGTATAACGGCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60
consensus_14566#12 ----------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 38
consensus_14566#10 TCGCTACGTAACGGCATGACCGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 60
consensus_14566#8 --------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 40
consensus_14566#11 -------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35
consensus_14566#6 ----------ACGCCATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 50
consensus_14566#0 ------------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36
consensus_14566#1 ---------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 39
consensus_14566#9 ----------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTT 38
******************************* ***
consensus_14566#5 TTTTTTTTTTTTTTTTTTTTTTTAAAAAAA--------CCCCCTTAAAA----------- 77
consensus_14566#7 TTTTTTTTTTTTTTTTTTTTTTT----------------TTTTTTAA------------- 67
consensus_14566#3 TTTTTTTTTTTTTTTTTTTTTTTT--------------TTTTTTCAAAA----------- 71
consensus_14566#4 TTTTTTTTTTTTTTTTTTTTTTTT--------------TTTTTTT--------------- 67
consensus_14566#2 TTTTTTTTTTTTTTTTTTTTTTTTTT------------TTTTTTCAA------------- 95
consensus_14566#12 TTTTTTTTTTTTTTTTTTTTTTTTCCAAAC--------TTTTTTTTT------------- 77
consensus_14566#10 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT--------TTTTTTTTT------------- 99
consensus_14566#8 TTTTTTTTTTTTTTTTTTTTTTTAGGGAAAAGG-----GTTAATTAACATAGGGGCCCCC 95
consensus_14566#11 TTTTTTTTTTTTTTTTTTTTTTTAGGA-----------------CAACA----------- 67
consensus_14566#6 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-----TTTTTTTTTCCAGGGGAG---- 101
consensus_14566#0 TTTTTTTTTTTTTTTTTTTTTCCAGGGAGAAAAAAAACTTCCTTTTAAAAAAAGTTTCAC 96
consensus_14566#1 TTTTTTTTTTTTTTTTTTTTTTTTAAATTAAAGGAGAAATGCTTGAAAAGGCAATCCTTT 99
consensus_14566#9 TTTTTTTTTTTTTTTTTTTTTTTTTTTTT----------TTTTCCCAAAAAAAACCCAA- 87
*********************
consensus_14566#5 ------------------------------------------------------------
consensus_14566#7 ------------------------------------------------------------
consensus_14566#3 ------------------------------------------------------------
consensus_14566#4 ------------------------------------------------------------
consensus_14566#2 ------------------------------------------------------------
consensus_14566#12 ------------------------------------------------------------
consensus_14566#10 ------------------------------------------------------------
consensus_14566#8 ------------------------------------------------------------
consensus_14566#11 ------------------------------------------------------------
consensus_14566#6 ------------------------------------------------------------
consensus_14566#0 CTTGTTTTTTCCTT-------GGGTTCCCTTTTAG-----CCCG---GGGCCCCATTAAA 141
consensus_14566#1 TTCATTTTGTTGACCGGGGGGGGGGCCCATACTAAACAAACCTGTAAAGGGCCCGGGGGA 159
consensus_14566#9 ------------------------------------------------GGG--------- 90
consensus_14566#5 ------------------------------------------------------------
consensus_14566#7 ------------------------------------------------------------
consensus_14566#3 ------------------------------------------------------------
consensus_14566#4 ------------------------------------------------------------
consensus_14566#2 ------------------------------------------------------------
consensus_14566#12 ------------------------------------------------------------
consensus_14566#10 ------------------------------------------------------------
consensus_14566#8 ---------------------------------------------------CAAAAAATA 104
consensus_14566#11 ------------------------------------------------------------
consensus_14566#6 ----------------------------------------------------GGGGAATG 109
consensus_14566#0 AAGGGGGGGCGGG---GTTCCTTCCAAATTTCCTTCCCAATACCCCCCCC--------CC 190
consensus_14566#1 AAAAAAAATTGGAATTGTTCCCCCCAAGGCCAAACAAAAAAAAAACCATGGGGGGGGGCC 219
consensus_14566#9 ----------------------GCCAATTTTGTTTTTAAAA------TTTGGGGGTTGGC 122
consensus_14566#5 A----ATTG----AACCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTCTTTAAAAC 129
consensus_14566#7 ----------------CCCCCTCACCCCATGTCAGGGGCCAAGGGCAAATTCTTTAAAAC 111
consensus_14566#3 A----AAAGGGCCCCCCCCCTTCACCCCATGTCAGGGCCCAAGGGCAAATTTTTTAAAAC 127
consensus_14566#4 -------------CTCCCCCTTCACCCCTTGTCAGGGCCCAAGGGCAAATTTTTTAAACC 114
consensus_14566#2 ----------------CCCCTTCACCCCATGTCAGGGCCCAGGGGCAAATTCTTTAAACC 139
consensus_14566#12 ---------------CCCCCTTCACCCCATGTAAGGGCCCAAGGGCAAATTCTTTAAACC 122
consensus_14566#10 ------------TCAACCCCTTCACCCCATTTCAGGGCCCAAGGGCAAATTCTTTAAACC 147
consensus_14566#8 ACAAAAAAAATTTTTACCCCTTCAACCCATGTCAGGGCCCAAGGGCAAATTCTTTTAAAC 164
consensus_14566#11 --AAATTAAATTTTTACCCCTTCAACCCATGTCAAGGGCCAAGGGCAAATTTTTTTAAAC 125
consensus_14566#6 GGAAAAAAAAAATATCCCCCTTCACCCCTTGTCAGGGCCCAGGGGCAAATTTTTTAAACC 169
consensus_14566#0 TTTCAAAGCCTTCT----CTTTAATCCCTTGTAAGGGCCCAGGGGCAAATTCTTTAAACC 246
consensus_14566#1 CCAAAATGCATTTTTACCCCTTCAACCCATGTAAGGGCCCAAGGGCAAATTCTTTAAAAC 279
consensus_14566#9 CTACAAAACTTTACT---CTTTAAACCCTTGTAAGGGCCCAGGGGCAATTTCTTTAAACC 179
* * * *** * * * ** *** ****** ** *** ** *
consensus_14566#5 CCGCAGGACTAACCCCTTTAGGGGGGGGAAATTCTGACCTGGGGGAAAACAGGGGCAAAA 189
consensus_14566#7 CCGCAGGACTACCCCCTTTAGGGGGGGGTAATTCTGACCTGGGGGAAAAAAGGGGCAAAA 171
consensus_14566#3 CCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGCGAAAACAGGGCCAAAC 187
consensus_14566#4 CCGCGGGACTTCCCCCTTTAGGGGGGGTAAATTTTAACCTGGGGGAAATCAGGGCCAAAC 174
consensus_14566#2 CCGCAAAACTTCCCCCTTTAGGGGGGGTAAATTCTGACCTGGGCGAAAACAGGGAAAAAC 199
consensus_14566#12 CCGCAGGACTACCCCCTTTAGGGGGGGTAAATTTTGACCTGGGGGAAAACAGGGCCAAAC 182
consensus_14566#10 CCGCAGAACTACCCCCTTTAAGGAGGGTAAATTCTAACCTTGGCGAAAAAATGGCCAAAC 207
consensus_14566#8 CCGCAGGACTAACCCCTTTAAGGGGGGGTAATTTTGACCTTGGGGAAAACAGGGGCAAAA 224
consensus_14566#11 CCGCAGGACTTTCCCCTTTAAGGGGGGGTAATTTTGAACTTGGGGTAAACAGGGGCAAAA 185
consensus_14566#6 CGGCGGGACTTCCCCTTTTAGGGGGGGTAAATTTTGACCTGGGGGAAATCAGGGCCAAAC 229
consensus_14566#0 CGGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCAAAC 306
consensus_14566#1 CCGCAGGACTATCCCCTTTAAGGGGGGTTAATTTTGACCTTGGGGAAAACAGGGGCAAAA 339
consensus_14566#9 CTGCGGGACTATCCCCTTTAGGGGGGGTTAATTTTGACCTGGGGGAAATCAGGGCCATAC 239
* ** *** *** **** ** *** **** * * ** ** * ** * ** * *
consensus_14566#5 CTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAAAACAACCCGGAACC 249
consensus_14566#7 CTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACC 231
consensus_14566#3 CTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCCCAAAATACAACCCGGAACC 247
consensus_14566#4 CTGTTCCCTGGGAAAAATTGTAACCCCCTCACAATTCCCCCCAAATTCCAACCCGGAACC 234
consensus_14566#2 CTGTTCCCTGGGAAAAATTGTTACCCCCTCAAAATTCCACAAAAAATACAACCCGAAAAC 259
consensus_14566#12 CTGTTCCCTGGGGAAAATTGTTACCCCCTCAAAATTCCCCACAAAATACAACCCGGAACC 242
consensus_14566#10 CTGTTCCCTGGGAAAAATTGTTTCCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACC 267
consensus_14566#8 CTGTTCCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCCCAAAATACAACCCGGAAAC 284
consensus_14566#11 CTGTTTCCTGGGGAAAAATGTTATCCCCTCAAAATTCCCCACAAAATACAACCCGGAAAC 245
consensus_14566#6 CTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCAAAAAATACAACCCGGAACC 289
consensus_14566#0 CGGTTCCCGGGGGAAAATTGTTTTCCCCTCACATTTCCCCCCAAAATACAACCCGGAACC 366
consensus_14566#1 CTGTTCCCTGGGGAAAATTGTTTCCCCCTCACAATTCCCCAAAAAATACAACCCGGAAAC 399
consensus_14566#9 CTGTTCCCTGGGGAAAATTGTTTTCCCCTCAAAATTCCCCACAAATTACAACCCGGAACC 299
* *** ** *** **** *** ******* * **** * *** ******* ** *
consensus_14566#5 AAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCACATTAATGGGGGGGCCC 309
consensus_14566#7 AAAAAGGGAAAACCCGGGGGGGCCCAAAGAGGGACCCAACCCCCATTAATTGGGGGGCCC 291
consensus_14566#3 ATAAAGGGAAAACCCGGGGGGCCCCAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCC 307
consensus_14566#4 ATAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTAATGGGGTGGCCC 294
consensus_14566#2 AAAAAGGGAAAACCCGGGGGGCCCTAAAGAGGGACCCACCCCACATTATTGGGGGGGCCC 319
consensus_14566#12 AAAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCATTAATGGGGTGGCCC 302
consensus_14566#10 ATAAAGGGAAAACCCGGGGGGCCCTAAGGAGGGACCCACCCCCCTTTAATTGGGTGGCCC 327
consensus_14566#8 AAAAAGGGTAAACCCCGGGGGGCCCAAAGAGGGGCCCACCCCCCATTAATTGGGTTGCCC 344
consensus_14566#11 ATAAAGGGTAAACCCCGGGGGGCCTAATGAGGGACCCAACCCCCATTAATTGGGTTGCCC 305
consensus_14566#6 AAAAAGGGAAAACCCGGGGGGCCCTAAGGGGGGACCCACCCCCCTTTATTGGGGTGGCCC 349
consensus_14566#0 TTAAAGGGAAAACCCGGGGGGGCCTAAGGGGGGACCTACCCCCCTTTATTGGGGTGGCCC 426
consensus_14566#1 ATAAAGGGTA-------------------------------------------------- 409
consensus_14566#9 TTAAAGGGTAAACCCGGGGGGCCCTAAGGAGGGACCTAC--------------------- 338
****** *
consensus_14566#5 CCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGGCCCCCTGCATTAAAAAATCCCCCAA 369
consensus_14566#7 CCACTGCCCCCTTTCCAAGGGGAAAACCTGGCGGCCCCCCTGAATTAAAAAATCCCCCCC 351
consensus_14566#3 CCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGGCCCCCCTGCTTTAATAAATCCCCCCC 367
consensus_14566#4 CCACTGCCCCTTTTCCAATGGGAAAACCTGTCGGCCCACCTGCATAAAAAAATCCCCCAC 354
consensus_14566#2 CCACTGCCCCTTTTCCAAGGGGAAAACCTGTCGCCCCACCTGTATAAAAAAATCCCCCAC 379
consensus_14566#12 CCAC-------------------------------------------------------- 306
consensus_14566#10 CCACTG------------------------------------------------------ 333
consensus_14566#8 CCACTG------------------------------------------------------ 350
consensus_14566#11 CCACTG------------------------------------------------------ 311
consensus_14566#6 CCAC-------------------------------------------------------- 353
consensus_14566#0 CCCCTG------------------------------------------------------ 432
consensus_14566#1 ------------------------------------------------------------
consensus_14566#9 ------------------------------------------------------------
consensus_14566#5 CC--------------------------------- 371
consensus_14566#7 CC--------------------------------- 353
consensus_14566#3 CCCCCGGGGAAAGGCGGTTTGCTTTTGGGGCCCT- 401
consensus_14566#4 CCCCCGGGGAAAGGCGGTTTGCTTATGGGGCCCTT 389
consensus_14566#2 CCCCCGGGGAAAGGCGGTTTGCTTATGG------- 407
consensus_14566#12 -----------------------------------
consensus_14566#10 -----------------------------------
consensus_14566#8 -----------------------------------
consensus_14566#11 -----------------------------------
consensus_14566#6 -----------------------------------
consensus_14566#0 -----------------------------------
consensus_14566#1 -----------------------------------
consensus_14566#9 -----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||