These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14571#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1741 fasta sequence [TCCTTGCCCCCCTCCCCCTCTCTCTCCCCAGAGGAGCAGCAAGGTCTCTCTCCTCCTCGATCTGCCGCAGGGGGTCCCCTCGATGGCGACGCCTCGCTCCCCGAGCACCCGCGGCGACGCGCTCCTTGACTCGGCGCCCCTGCTCGGCGGGGGCGGCGGCGGCGGCGGCGGCCGGCGCCGAGGGGGCGCGCTCCGCCGGCCGTCGCTCCGCGGCGCGGCGCGGCTGCTGCGGCGCGGGGGGCGGCGGGCGATGCGGGAGCCGTCGGTGCTGGTGCGGGAGGCGGCCGCGGAGCACCTCGAGGAGCGGCAGGCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAACCTCGCTTTCATCACCGTCGCCGCCG-TCGTGCTCGTGCTCAGCCGTGGCGAGGACTCGCCCATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTGCGTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGACGAGGAAAGGGGAAGTGACGGGTCGTCTTCATCTAGCGATGATGATGTCACGGAGGACGATCGCCGTGGTAGCTGCACCGATTGCGTCAGTATTGCAAAGCACCTGGAGTCAGCTAATACAATGTTCTCCTTCATATGGTGGATAATTGGATTTTATTGGATATCTGCTGGGGGTGAGGATGTTATCCGTGATGCACCTCAGCTTTACTGG-CTTTGCATAGTCTTTCT-GGCATTTGACGTGTTCTTT-GTTGTATTCT-GTGTTGCTCT-GGCTTGCATCATT-GGTATTGCTGTATGTTGCTGCCTACCTTGCATTATAGCTATTCTCTATGCGGTTTCTGATCAGGAAGGAGCGTCAGAAGATGATATTCGCCAAATTCCAAGATACAAATTTCGGAGAACAGATGAACCTGAAAAACAAACTGCTGATGAGACAGGACCTTTTGGTGGAATAATGACAGAGTGTGGCACCAATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCAAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGACTCAAGACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTATGCTCCTGCCTTGGTCATTGGTTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTGAATTGTCAGGTACAAACGAAATGCGTCCTGCTTATGATTCATCTCTTGTACTCTCGAAGTCCTACAGCCAGTTCTTCCGAACTGAAGCATTTTACCGAGCTGGGAGTCATAAAAGATGTTTTTGATCGGTCTGTTGTTGAACTGATAAGGTAATAAAATATTTGAAATCTGA] [+] EMBL CB665891 [TCCTTGCCCCCCTCCCCCTCTCTCTCCCCAGAGGAGCAGCAAGGTCTCTCTCCTCCTCGATCTGCCGCAGGGGGTCCCCTCGATGGCGACGCCTCGCTCCCCGAGCACCCGCGGCGACGCGCTCCTTGACTCGGCGCCCCTGCTCGGCGGGGGCGGCGGCGGCGGCGGCGGCCGGCGCCGAGGGGGCGCGCTCCGCCGGCCGTCGCTCCGCGGCGCGGCGCGGCTGCTGCGGCGCGGGGGGCGGCGGGCGATGCCGGAGCCGTCGGTGCTGGTGC ] [+] EMBL CB665889 [TCCTTGCCCCCCTCCCCCTCTCTCTCCCCAGAGGAGCAGCAAGGTCTCTCTCCTCCTCGATCTGCCGCAGGGGGTCCCCTCGATGGCGACGCCTCGCTCCCCGAGCACCCGCGGCGACGCGCTCCTTGACTCGGCGCCCCTGCTCGGCGGGGGCGGCGGCGGCGGCGGCGGCCGGCGCCGAGGGGGCGCGCTCCGCCGGCCGTCGCTCCGCGGCGCGGCGCGGCTGCTGCGGCGCGGGGGGCGGCGGGCGATGCGGGAGCCGTCGGTGCTGGTGCGGGAGGCGGCCGCGGAGCACCTCAAGGAGCGGCAGGCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAACCTCGCTTTC TCACCGTCCCCGCCGTTCGTGCTCGAGCTCAACCG ] [+] EMBL CB659619 [ cCATCAAGGTCTCTCTCCTCCTCGATCTGCCGCAGGGGGTCCCCTCGATGGCGACGCCTCGCTCCCCGAGCACCCGCGGCGACGCGCTCCTTGACTCGGCGCCCCTGCTCGGCGGGGGCGGCGGCGGCGGCGGCGGCCGGCGCCGAGGGGGCGCGCTCCGCCGGCCGTCGCTCCGCGGCGCGGCGCGGCTGCTGCGGCGCGGGGGGCGGCGGGCGATGCGGGAGCCGTCGGTGCTGGTGCGGGAGGCGGCCGCGGAGCACCTCGAGGAGCGGCAGGCGGACTGGGCCTACTCCCGCCCCGACGTGGCGCTCGACCTGCTCTGGAACCTCGCTTTCATCACCGTCGCCGCCG TCGTGCTCGTGCTCAGCCGTGGCGAGGACTCGCCCATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTGCGTCTCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGACGAGGAAAGGGGAAGTGACGGGTCGTCTTCATCTAGCGATGATGATGTCACGGAGGACGATCGCCGTGGTAGCTGCACCGATTGCGTCAGTATTGCAAAGCACCTGGAGTCAGCTAATACAATGTTCTCCTTCATATGGTGGATAATTGGATTTTATTGGATATCTGCTGG ] [+] EMBL CA753485 [ TCGCTCCGCGGCGCGGCGCGGCTGCTGCGGCGCGGGGGGCGGCGGGCGATGCGGGAGCCGTCGGTGCTGGTGCGGGAGGCGGCCGCGGAGCACCTCGAGGAGCGGCAGGCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAACCTCGCTTTCATCACCGTCGCCGCCG TCGTGCTCGTGCTCAGCCGTGGCGAGGACTCGCCCATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTGCGTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGACGAGGAAAGGGGAAGTGACGGGTCGTCTTCATCTAGCGATGATGATGTCACGGAGGACGATCGCCGTGGTAGCTGCACCGATTGCGTCAGTATTGCAAAGCACCTGGAGTCAGCTAATACAATGTTCTCCTTCATATGGTGGATAATNGGATTTTATTGGATATCTGCTGGGGGTGAGGATGTNATCCGTGATGCCCCTCAGCTTTACTGGCCTTTGCATATTCTTTCTGGGCATTGGACGTGTTCTTTGGTTGTATTCTGGTGTTGCTCTGGGCTTGCATTATTGGGTATTGCT ] [+] EMBL CB621417 [ CGGNGCGGGGGGCGGCGGGCGATGCGGGAGCCGTCGGTGCTGGTGCCGGAGGCGGCCGCGGAGCACCTCGAGGAGCGGCAGGCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAACCTCGCTTTCATCACCGTCGCCGCCG TCGTGCTCGTGCTCAGCCGCGGCGAGGACTCGCCCATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTGCGTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGACGAGGAAAGGGGAAGTGACGGGTCGTCTTCATCTAGCGATGATGATGTCACGGAGGACGATCGCCGTGGTAGCTGCACCGATTGCGTCAGTATTGCAAAGCACCTGGAGTCAGCTAATACAATGTTCTCCTTCATATGGTGGATAATTGGATTTTATTGGATATCTGCTGGGGGTGAGGATGTTATCCGTGATGCACCTCAGCTTTACTGG CTTTGCATAGTCTTTCT GGCATTTGACGTGTTCTTT GTTGTATTCT GTGGTGCTCT GGCTTGCATCATT GGTATTGCTGGATGTTGCTGCCTACCTTG ] [+] EMBL AK070267 [ GCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAACCTCGCTTTCATCACCGTCGCCGCCG TCGTGCTCGTGCTCAGCCGTGGCGAGGACTCGCCCATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTGCGTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGACGAGGAAAGGGGAAGTGACGGGTCGTCTTCATCTAGCGATGATGATGTCACGGAGGACGATCGCCGTGGTAGCTGCACCGATTGCGTCAGTATTGCAAAGCACCTGGAGTCAGCTAATACAATGTTCTCCTTCATATGGTGGATAATTGGATTTTATTGGATATCTGCTGGGGGTGAGGATGTTATCCGTGATGCACCTCAGCTTTACTGG CTTTGCATAGTCTTTCT GGCATTTGACGTGTTCTTT GTTGTATTCT GTGTTGCTCT GGCTTGCATCATT GGTATTGCTGTATGTTGCTGCCTACCTTGCATTATAGCTATTCTCTATGCGGTTTCTGATCAGGAAGGAGCGTCAGAAGATGATATTCGCCAAATTCCAAGATACAAATTTCGGAGAACAGATGAACCTGAAAAACAAACTGCTGATGAGACAGGACCTTTTGGTGGAATAATGACAGAGTGTGGCACCAATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCAAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGACTCAAGACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTATGCTCCTGCCTTGGTCATTGGTTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTGAATTGTCAGGTACAAACGAAATGCGTCCTGC ] [+] EMBL AY224421 [ GTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGACGAGGAAAGGGGAAGTGACGGGTCGTCTTCATCTAGCGATGATGATGTCACGGAGGACGATCGCCGTGGTAGCTGCACCGATTGCGTCAGTATTGCAAAGCACCTGGAGTCAGCTAATACAATGTTCTCCTTCATATGGTGGATAATTGGATTTTATTGGATATCTGCTGGGGGTGAGGATGTTATCCGTGATGCACCTCAGCTTTACTGG CTTTGCATAGTCTTTCT GGCATTTGACGTGTTCTTT GTTGTATTCT GTGTTGCTCT GGCTTGCATCATT GGTATTGCTGTATGTTGCTGCCTACCTTGCATTATAGCTATTCTCTATGCGGTTTCTGATCAGGAAGGAGCGTCAGAAGATGATATTCGCCAAATTCCAAGATACAAATTTCGGAGAACAGATGAACCTGAAAAACAAACTGCTGATGAGACAGGACCTTTTGGTGGAATAATGACAGAGTGTGGCACCAATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGA ] [+] EMBL CA999983 [ CGTCAGTATTGCAAAGCACCTGGACTTAGCTAATACAATGTTCTCCTTCATATGGTGGATAATTGGATTTTATTGGATATCTGCTGGGGGTGAGGATGTTATCCGTGATGCACCTCAGCTTTACTGG CTTTGCATAGTCTTTCT GGCATTTGACGTGTTCTTT GTTGTATTCT GTGTTGCTCT GGCTTGCATCATT GGTATTGCTGTATGTTGCTGCCTACCTTGCATTATAGCTATTCTCTATGCGGTTTCTGATCAGGAAGGAGCGTCAGAAGATGATATTCGCCAAATTCCAAGATACAAATTTCGGAGAACAGATGAACCTGAAAAACAAACTGCTGATGAGACAGGACCTTTTGGTGGAATAATGACAGAGTGTGGCACCAATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAA ] [-] EMBL CB659620 [ AGCTATTCTCTATGCGGTTTCTGATCAGGAAGGAGCGTCAGAAGATGATATTCGCCAAATTCCAAGATACAAATTTCGGAGAACAGATGAACCTGAAAAACAAACTGCTGATGAGACAGGACCTTTTGGTGGAATAATGACAGAGTGTGGCACCAATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCAAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGATTCAAGACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTATGCTCCTGCCTTGGTCATTGGTTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTGAATTATGAGGTACAAACGAAATGCGTCCTGCTTATGATT ] [-] EMBL CB646522 [ GATGATATTCGCCAAATTCCAAGATACAAATTTCGGAGAACAGATGAACCTGAAAAACAAACTGCTGATGAGACAGGACCTTTTGGTGGAATAATGACAGAGTGTGGCACCAATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCAAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGACTCAAGACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTATGCTCCTGCCTTGGTCATTGGTTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTG TAAATTGTCAGGTACAAACGAAATGCGTCCTGCTT ] [-] EMBL CA759752 [ GATGAACCTGAAAAACAACCTGCTGATGAGACAGGACCTTCTGGTGGAATAATGACAGAGTGTGGCACCAATCAACCTACTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCAAAATGTGTGATAAGCGTCATATATGTACTTGAAGTGACTCAAGACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATATATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTATGCTCCTGCCTTGGTTATCGGTTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTGAATTGTCAGGTACAAACGAAATGCGTCCTGCTTATGATTCA ] [+] EMBL BI798769 [ GACAGGACCTTTTGGTGGAATAATGACAGAGTGTGGCACC ATCAACCTATTGAGAAAGTACTCGCACCTGAAGAT CGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCC CTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCCAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGACTCAAGACTGCTGTTCATATCCACATACATGGTTGTCC ATGTGTCTTTTACTGTCCGGAATATATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTAaaaa ] [-] EMBL CB665892 [ GGAATAATGACAGAGTGTGGCACCAATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCAAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGACTCAAGACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTATGCTCCTGCCTTGGTCATTGGTTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTGAATTGTCAGGTACAAACGAAATGCGTCCTGCTTATGATTCATCTCTTGTACTCTCGAAGTCCTACAGCCAGTTCTTCCGAACTGAAGCATTTTACCGAGCTGGGAGTCATAAAAGATGTTTTTGATCGGTCTGTTGTTGAACTGATAAGGTAATAAAATATTTGAAATCTGA] [-] EMBL CB665890 [ GTGTGGCACCAATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGGCATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCTGCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCAAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGACTCAAGACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTATGCTCCTGCCTTGGTCATTGGTTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTGAATTGTCAGGTACAAACGAAATGCGTCCTGCTTATGATTCATCTCTTGTACTCTCGAAGTCCTACAGCCAGTTCTTCCGAACTGAAGCATTTTACCGAGCTGGGAGTCATAAAAGATGTTTTTGATCGGTCTGTTGTTGGACTGATAAGGTAATAAAATATTTGAAATCTGA] [+] EMBL BQ907040 [ ccgTATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGAAAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGAACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAGTGTAAATTTTGTATCCAAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGACTCAAGACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATATATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTAGCATGGTTTGTGCTTATGCTCCTGCCTTGGTCATTGGTTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTGAATTGTCAGGTACAAACGAAATGCGTCCTGCTTATGATTaaaaa ] consensusID : consensus_14571#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence [GCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAACCTCGCTTTCATCACCGTCGCCGCCGTCGTGCTCGTGCTCAGCCGTGGCGAGGACTCGCCCATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTGCGTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGACGAAGAAAGGGGAAAGTGACGGGTCGTCTTCATCTACGATGATGATGTCACGGAAGACAATCGCCCGTGGTAGCTGCACCCGATTGCTTCAGTATTGCNAAAGCACCTGGAGTTCAGCTTAATACATGTTCTCCTTCCATATGGTTGGAATAATTGGATTTTAATTGGATATCTGCTGGGGTGAAGAAGTTTACCGTGAAGCACCTCCACTTTACTGGTTTGCATATCTTCCTGNANTGANNTTTCCTTGTTGTTCCGTTTGCCCCGNCTGCACATGGTATGCNTTNTTTGNGCCACCTGCTANACTTCCCTTTCGTTCCNTTNGAAGAANTCTAAAAAATTCCCATCCAAANATTCGAAAAAAAACTAAAAAATTTAAAAAANANTTTGGGAAAAAAAATTTGGCCCCNCCTTN] [+] EMBL BE229106 [GCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAACCTCGCTTTCATCACCGTCGCCGCCGTCGTGCTCGTGCTCAGCCGTGGCGAGGACTCGCCCATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTGCGTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGACGAAGAAAGGGGAAAGTGACGGGTCGTCTTCATCTACGATGATGATGTCACGGAAGACAATCGCCCGTGGTAGCTGCACCCGATTGCTTCAGTATTGCNAAAGCACCTGGAGTTCAGCTTAATACATGTTCTCCTTCCATATGGTTGGAATAATTGGATTTTAATTGGATATCTGCTGGGGTGAAGAAGTTTACCGTGAAGCACCTCCACTTTACTGGTTTGCATATCTTCCTGNANTGANNTTTCCTTGTTGTTCCGTTTGCCCCGNCTGCACATGGTATGCNTTNTTTGNGCCACCTGCTANACTTCCCTTTCGTTCCNTTNGAAGAANTCTAAAAAATTCCCATCCAAANATTCGAAAAAAAACTAAAAAATTTAAAAAANANTTTGGGAAAAAAAATTTGGCCCCNCCTTN] consensusID : consensus_14571#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 323 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAGTGGTGGTCCGTTGGAGTAGGCTGCGCATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTCCTGCTTGTGTAGCATGGTTTGTGCTATGCTCCTGCCTTGGTCATTGGTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTAATTGTCAGGTNCAAACGAAATGCGTCCTGCTTATGATTCAAAAA] [+] EMBL AU176520 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAGTGGTGGTCCGTTGGAGTAGGCTGCGCATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACATGCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTCCTGCTTGTGTAGCATGGTTTGTGCTATGCTCCTGCCTTGGTCATTGGTCAGCACAAAAACTGTTGTAAATGGGCTATCGGTCCTGTTAATTGTCAGGTNCAAACGAAATGCGTCCTGCTTATGATTCAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14571#0 TCCTTGCCCCCCTCCCCCTCTCTCTCCCCAGAGGAGCAGCAAGGTCTCTCTCCTCCTCGA 60 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 TCTGCCGCAGGGGGTCCCCTCGATGGCGACGCCTCGCTCCCCGAGCACCCGCGGCGACGC 120 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 GCTCCTTGACTCGGCGCCCCTGCTCGGCGGGGGCGGCGGCGGCGGCGGCGGCCGGCGCCG 180 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 AGGGGGCGCGCTCCGCCGGCCGTCGCTCCGCGGCGCGGCGCGGCTGCTGCGGCGCGGGGG 240 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 GCGGCGGGCGATGCGGGAGCCGTCGGTGCTGGTGCGGGAGGCGGCCGCGGAGCACCTCGA 300 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 GGAGCGGCAGGCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAA 360 consensus_14571#1 ----------GCGGACTGGGCCTACTCCCGCCCCGTCGTGGCGCTCGACCTGCTCTGGAA 50 consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 CCTCGCTTTCATCACCGTCGCCGCCGTCGTGCTCGTGCTCAGCCGTGGCGAGGACTCGCC 420 consensus_14571#1 CCTCGCTTTCATCACCGTCGCCGCCGTCGTGCTCGTGCTCAGCCGTGGCGAGGACTCGCC 110 consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 CATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTG 480 consensus_14571#1 CATGCCGCTCCGGACCTGGGTCGCCGGCTACGCCCTGCAGTGCGTCGTCCACATGGTCTG 170 consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 CGTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGA 540 consensus_14571#1 CGTCGCCATCGAGTACCGGATGCGCCGGGGGCAGCGTGACAGGGCCCCGGCGTCCGCCGA 230 consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 CGAGGAAAGGGGAA-GTGACGGGTCGTCTTCATCTAGCGATGATGATGTCACGGAGGACG 599 consensus_14571#1 CGAAGAAAGGGGAAAGTGACGGGTCGTCTTCATCTA-CGATGATGATGTCACGGAAGACA 289 consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 ATCGCC-GTGGTAGCTGCACC-GATTGCGTCAGTATTGCAAA-GCACCTGGAGT-CAGCT 655 consensus_14571#1 ATCGCCCGTGGTAGCTGCACCCGATTGCTTCAGTATTGCNAAAGCACCTGGAGTTCAGCT 349 consensus_14571#2 ----------------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTTTTT 38 ** * * ** * * ** * consensus_14571#0 -AATACAATGTTCTCCTTC-ATATGGT--GGATAATTGGATTTTA-TTGGATATCTGCTG 710 consensus_14571#1 TAATACA-TGTTCTCCTTCCATATGGTTGGAATAATTGGATTTTAATTGGATATCTGCTG 408 consensus_14571#2 TTTTTTTTTTTTTTTTTTTTTTTTTTT-----TTTTTTTTTATAAAGTGGTGGTCCGTTG 93 * * ** * ** * * * * ** * * * *** ** * ** consensus_14571#0 GGGGTGAGGATGTTATCCGTGATGCACCTCAGCTTTACTGGCTTTGCATAGTCTTTCTGG 770 consensus_14571#1 GGG-TGAAGAAGTTTACCGTGAAGCACCTCCACTTTACTGG-TTTGCATA-TCTTCCTGN 465 consensus_14571#2 GAG--TAGGCTGCGCATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATA--CATGCTTA 149 * * * * * ** ** **** * * *** * * ** consensus_14571#0 CATTTGACGTGTTCTTTGTTGTATTCTGTGTTGCTCTGGCTTGCATCATTGGTATTGCTG 830 consensus_14571#1 AN--TGANNT-TTCCTTGTTGT--TCCGT-TTGCCCCGNCT-GCAC--ATGGTATGCNTT 516 consensus_14571#2 GT--TGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTCCTGCTTGTGTAGCATG 207 ** * **** * * * * * * * ** * consensus_14571#0 TATGTTGCTGCCTACCTTGCATTATAGCTATTCTCTATGCGGTTTCTGATCAGGAAGGAG 890 consensus_14571#1 NTTTGNGCCACCTGCTANACTTCCCTTTCGTTCCNTTNGAAGAANTCTA--AAAAATTCC 574 consensus_14571#2 GTTTGTGCTATGCTCCTGCCTTGGTCATTGGTCAGCACAAAAACTGTTG--TAAATGGGC 265 * ** * * * ** * consensus_14571#0 CGTCAGAAGATGATATTCGCCAAATTCCAAGATACAAATTTCGGAGAACAGATGAACCTG 950 consensus_14571#1 CATCCAAA-----NATTCGAAAAA----AAACTAAAAAATTTAAAAAAN-----ANTTTG 620 consensus_14571#2 TATC---------GGTCCTGTTAATTGTCAGGTNCAAA--CGAAATGCGTCCTGCTTATG 314 ** * * ** * * *** * ** consensus_14571#0 AAAAACAAACTGCTGATGAGACAGGACCTTTTGGTGGAATAATGACAGAGTGTGGCACCA 1010 consensus_14571#1 GGAAAAAAA------ATTTGGCCCCNCCTTN----------------------------- 645 consensus_14571#2 ATTCAAAAA--------------------------------------------------- 323 * *** consensus_14571#0 ATCAACCTATTGAGAAAGTACTCGCACCTGAAGATGCGGAGTGTTGCATTTGCCTTTCGG 1070 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 CATATGATGATGGTGCAGAGCTGCGTGAACTTCCTTGTGGGCACCATTTCCACTGTGCCT 1130 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 GCATTGATAAATGGCTGCATATCAACGCAACATGCCCCCTGTGCAAGTTCAATATCCGGA 1190 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 AAAGTGGCAGTAGCAGTGGAAGTGAAGAAGTATGATTGTGTGAATATCCTCCGGTCGAGA 1250 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 ACACCGATCCATTTCAACTTCACACCTGTCTCTGCTAATGCAACCACAGGACCTGACCAG 1310 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 TGTAAATTTTGTATCCAAAATGTGTGATTAGCGTCATATATGTACTTGAAGTGACTCAAG 1370 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 ACTGCTGTTCATATCCACATACATGGTTGTCCAATGTGTCTTTTACTGTCCGGAATACAT 1430 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 GCTTAGTTGCCCCGTGAGTTGTAATTCTTCGAGTGATCCTCACATTTCCTGCTTGTGTTA 1490 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 GCATGGTTTGTGCTTATGCTCCTGCCTTGGTCATTGGTTCAGCACAAAAACTGTTGTAAA 1550 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 TGGGCTATCGGTCCTGTTGAATTGTCAGGTACAAACGAAATGCGTCCTGCTTATGATTCA 1610 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 TCTCTTGTACTCTCGAAGTCCTACAGCCAGTTCTTCCGAACTGAAGCATTTTACCGAGCT 1670 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 GGGAGTCATAAAAGATGTTTTTGATCGGTCTGTTGTTGAACTGATAAGGTAATAAAATAT 1730 consensus_14571#1 ------------------------------------------------------------ consensus_14571#2 ------------------------------------------------------------ consensus_14571#0 TTGAAATCTGA 1741 consensus_14571#1 ----------- consensus_14571#2 ----------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||