cluster # 14573

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Oryza sativa
cluster # 14573 cluster # 14573 Sequences # 17 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14573#0 length = 1582 sequences # 16

consensus_14573#1 length = 413 sequences # 1

consensusID : consensus_14573#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1582
fasta sequence

                              [AGGGTTTCCTCCTCGCCGCCGTCGCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTCCCCGTCGCCGCCGCCGGCGGCGGCGGCTGCGGCGACGCAGCAGACGCAG-CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACGCGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT-GATCTGATTCTGAGGCCTTCTGACGA-GGATTTAAAGATCTGGCCTCACAGTTTTGA-GTTCCGCTT-GAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGTCTCACTTCTCGAATTAGGAATACCAACACTGATGGAAGATCTTTCTCTTACACATTTGCATATCACACATACTTCTCTGTCTCTGACATCAGTGAAGTGCGTGTTGAAGGGCTGGAAACAATGGACTACCTTGACAATTTGAAGGGAAAGGAGCGTTTTACAGAGCAAGGGGATGCTATTGTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATTGATCATGAAAAGAAAAGGACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGT-TTGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAACACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAAGAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTAGTGGGCAGTTAGATCCATTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTGCGTCTTGTACAGGAGCACCTCATTGCCCTTAATATTTGATGCTGGGCTGGCGCGCGACCTTTTCTTTCTTTGCCATTTTAAATCCCCCGTGCTTCGTTCTTTTTTTGTACCTAGAAGTGAGTAGTAGGGTACCTCCGAAATAACAGACTGTGCCACCTGCTTCGACCCTAGAGCGGATCATCTCCTTGGTGAATGAATTCGACCAGTGGACACAAGCCATTCGTGCCCTGGTGATATGATTCATCGTCCATATTCCAGGAAATATTCGCCATGCTGCATAAGGTCCGTAGCATTCTCAGTTAATCTGTAGTTATGATCATTGGGAGCATTTGAGTTACACTGGCTTGCTACTGTGCTTCAAAGCCTAGTTCTTTGCCTCCTTGTGCAAACGCCTCTAAAGAATGATGTCAGGTGCAGCTAGTAGTAATATGTTGTCAATACATGAGAATTGAGTATCGACTGTTTTGAGTCGCCTTGGGTAAGGCCCAGTTTGGATCAAAGCATATTTTGCATGAGTTCA]

[+] EMBL CF340452             [AGGGTTTCCTCCTCGCCGCCGTCGCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTCCCCGTCGCCGCCGCCGGCGGCGGCGGCTGCGGCGACGCAGCAGACGCAG CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACGCGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GATCTGATTCTGAGGCTTTCTGACGA GGATTTAAAGATCTGGCCTCACAGTTTTGA GTTCCGCTT GAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGTCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF338855             [AGGGTTTCCTCCTCGCCGCCGTCGCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTCCCCGTCGCCGCCGCCGGCGGCGGCGGCTGCGGCGACGCAGCAGACGCAG CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACGCGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GATCTGATTCTGAGGCTTTCTGACGA GGATTTAAAGATCTGGCCTCACAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF340360             [AGGGTTTCCTCCTCGCCGCCGTCGCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTCCCCGTCGCCGCCGCCGGCGGCGGCGGCTGCGGCGACGCANCAGACGCAG CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACGCGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF339692             [AGGGTTTCCTCCTCGCCGCCGTCTCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF340046             [AGGGTTTCCTCCTCGCCGCCGTCGCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTCCCCGTCGCCGCCGCCGGCGGCGGCGGCTGCGGCGACGCAGCAGACGCAG CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACGCGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GATCTGATTCTGAGGCTTTCTGACGA GGATTTAAAGATCTGGCCTCACAGTTTTGA GTTCCGCTT GAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGTCTCACTTCTCGAATTAGGAATACCAACACTGATGGAAGATCTTTCTCTTACACATTTGCATATCACACATACTTCTCTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF339476             [AGGGTTTCCTCCTCGCCGCCGTCGCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTCCCCGTCGCCGCCGCCGGCGGCGGCGGCTGCGGCGACGCAGCAGACGCAG CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACGCGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GATCTGATTCTGAGGCTTTCTGACGA GGATTTAAAGATCTGGCCTCACAGTTTTGA GTTCCGCTT GAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGTCTCACTTCTCGAATTAGGAATACCAACACTGATGGAAGATCTTTCTCTTACACATTTGCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU064300             [                                                                                                    CGCAG CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGC NG NCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GATCTGATTCTGAGGCCTTCTGACGA GGATTTAAAGATCTGGCCTCACAGTTTTGA GTTCCGCTT GAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGTCTCACTTCTCGAATTAGGAATACCAACACTGATGGAAGATCTTTCTCTTACACATTTGCATATCACACATACTTCTCTGTCTCTGACATCAGTGAAGTGCGTGTTGAAGGGCTGGAAACAATGGACTACCTTGACAATTTGAAGGGAAAGGAGCGTTTTACAGAGCAAGGGGATGCTATTGTATTTGAATCAGAGATTGATAAGGNATACCTTGCTGCACCTTCAAAAATTGCAATTATTGATCATGAAAAGAAAAGGACATTTGTCTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C99527               [                                                                                                    CGCAGACCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACG NCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GATCTGATTCTGAGGCCTTCTGACGA GGATTTAAAGATCTGGCCTCACAGTTTTGA GTTCCGCTTGGAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL C73754               [                                                                                                     gnAG CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCA  CGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTTGGATCTGATTCTGAGGCCTTCTNACGAGGGATTTAAAGATCTGGCCTCACAGTTTTGAGGTTCCGNTT GAGAGTTGCTCTTNGTCCTAATGGGGGNTTGAGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C73933               [                                                                                                       AG CCGCACCCGCAGACGCCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACGCG GACTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGACCATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATTCGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GATCTGATTCTGAGGCCTTCTGACGN GGATTTAAAGATCTGGCCTCACAGTTTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF310605             [                                                                                                                                                                                                                                                                                                                                                                       ATGGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAACCCTGCTATTAAATCTTTTGTT GATCTGATTCTGAGGCCTTCTGACGA GGATTTAAAGATCTGGCCTCACAGTTTTGA GTTCCGCTT GAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGTCTCACTTCTCGAATTATGAATACCAACACTGATGGAAGATCTTTCTCTTACACATTTGCATATCACACATACTTCTCTGTCTCTGACATCAGTGAAGTGCGTGTTGAAGGGCTGGAAACAATGGACTACCTTGACAATTTGAAGGGAAAGGAGCGTTTTACAGAGCAAGGGGATGCTATTGTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATTGATCATGAAAAGAAAAGGACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGT TTGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAACACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAAGAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB665647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CCTAATCGGGATTTGAGTCTCACTTCTCGAATTAGGAATACCAACACTGATGGAAGATCTTTCTCTTACACATTTGCATATCACACATACTTCTCTGTCTCTGACATCAGTGAAGTGCGTGTTGAAGGGCTGGAAACAATGGACTACCTTGACAATTTGAAGGGAAAGGAGCGTTTTACAGAGCAAGGGGATGCTATTGTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATTGATCATGAAAAGAAAAGGACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGT TTGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAACACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAAGAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTAGTGGGCAGTTAGATCCATTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTGCGTCTTGTACAGGAGCACCTCATTGCCCTTAATATTTGATGCTGGGCTGGCGCGCGACCTTTTCTTTCTTTGCCATTTTAAATCCCCCGTGCTTCGTTCTTTTTTTGTACCTAGAAGTGAGTAGTAGGGTACCTCCGAAATAACAGACTGTGCCACCTGCTTCGACCCTAGAGCGGATCATCTCCTTGGTGAATGAATTCGACCAGTGGACACAAGCCATTCGTGCCCTGGTGATATGATTCATCGT                                                                                                                                                                                                                                                                                 ]
[+] EMBL BE229447             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            cgagAGATGCTGTAGTATTGGAACCCTTGGGACAAGAAGGCAAAAGCTAYVCAAGATTTTGGAGATGGAGAATACAAACACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAAGAGTGGAAAGGAAGACTTSCACTCTCAGCTGTTCCTTCCAGTTACTGTAGTGGGCAGTTAGATCCATTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTGCGTCTTRTACAGGAGCACCTCATTGCCCTTAATATTTGATGCTGGGCTSGCGC CGACCTTTTCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB665648             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTGT TTGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAACACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAAGAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTAGTGGGCAGTTAGATCCATTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTGCGTCTTGTACAGGAGCACCTCATTGCCCTTAATATTTGATGCTGGGCTGGCGCGCGACCTTTTCTTTCTTTGCCATTTTAAATCCCCCGTGCTTCGTTCTTTTTTTGTACCTAGAAGTGAGTAGTAGGGTACCTCCGAAATAACAGACTGTGCCACCTGCTTCGACCCTAGAGCGGATCATCTCCTTGGTGAATGAATTCGACCAGTGGACACAAGCCATTCGTGCCCTGGTGATATGATTCATCGTCCATATTCCAGGAAATATTCGCCATGCTGCATAAGGTCCGTAGCATTCTCAGTTAATCTGTAGTTATGATCATTGGGAGCATTTGAGTTACACTGGCTTGCTACTGTGCTTCAAAGCCTAGTTCTTTGCCTCCTTGTGCAAACGCCTCTAAAGAATGATGTCAGGTGCAGCTAGTAGTAATATGTTGTCAATACATGAGAATTGAGTATCGACTGTTTTGAGTCGCCTTGGGTAAGGCCCAGTTTGGATCAAAGCATATTTTGCATGAGTTCA]
[-] EMBL CF310606             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GGAGATGGAGAATACAAACACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAAGAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTAGTGGGCAGTTAGATCCATTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTGCGTCTTGTACAGGAGCACCTCATTGCCCTTAATATTTGATGCTGGGCTGGCGCGCGACCTTTTCTTTCTTTGCCATTTTAAATCCCCCGTGCTTCGTTCTTTTTTTGTACCTAGAGGTGAGTAGTAGGGTACCTCCGAAATAACAGACTGTGCCACCTGCTTCGACCCTAGAGCGGATCATCTCCTTGGTGAATGAATTCGACCAGTGGACACAAGCCATTCGTGCCCTGGTGATATGATTCATCGTCCATATTCCAGGAAATATTCGCCATGCTGCATAAGGTCCGTAGCATTCTCAGTTAAaaaaaaaaa                                                                                                                                                                                                                ]
[+] EMBL CA764690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTCCTTGTGCAAACGCCTCTAAAGAATGATGTCAGGTGCAGCTAGTAGTAATATGTTGTCAATACATGAGAATTGAGTATCGACTGTTTTGAGTCGCC                                              ]




>consensus_14573#0
AGGGTTTCCTCCTCGCCGCCGTCGCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTCCCCG
TCGCCGCCGCCGGCGGCGGCGGCTGCGGCGACGCAGCAGACGCAGCCGCACCCGCAGACG
CCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACG
CGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGAC
CATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATT
CGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACAT
GGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAAC
CCTGCTATTAAATCTTTTGTTGATCTGATTCTGAGGCCTTCTGACGAGGATTTAAAGATC
TGGCCTCACAGTTTTGAGTTCCGCTTGAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGT
CTCACTTCTCGAATTAGGAATACCAACACTGATGGAAGATCTTTCTCTTACACATTTGCA
TATCACACATACTTCTCTGTCTCTGACATCAGTGAAGTGCGTGTTGAAGGGCTGGAAACA
ATGGACTACCTTGACAATTTGAAGGGAAAGGAGCGTTTTACAGAGCAAGGGGATGCTATT
GTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATT
GATCATGAAAAGAAAAGGACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGTT
TGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAA
CACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAA
GAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTAGTGGGCAGTTA
GATCCATTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTGCGTCTTGTACAGGAGCAC
CTCATTGCCCTTAATATTTGATGCTGGGCTGGCGCGCGACCTTTTCTTTCTTTGCCATTT
TAAATCCCCCGTGCTTCGTTCTTTTTTTGTACCTAGAAGTGAGTAGTAGGGTACCTCCGA
AATAACAGACTGTGCCACCTGCTTCGACCCTAGAGCGGATCATCTCCTTGGTGAATGAAT
TCGACCAGTGGACACAAGCCATTCGTGCCCTGGTGATATGATTCATCGTCCATATTCCAG
GAAATATTCGCCATGCTGCATAAGGTCCGTAGCATTCTCAGTTAATCTGTAGTTATGATC
ATTGGGAGCATTTGAGTTACACTGGCTTGCTACTGTGCTTCAAAGCCTAGTTCTTTGCCT
CCTTGTGCAAACGCCTCTAAAGAATGATGTCAGGTGCAGCTAGTAGTAATATGTTGTCAA
TACATGAGAATTGAGTATCGACTGTTTTGAGTCGCCTTGGGTAAGGCCCAGTTTGGATCA
AAGCATATTTTGCATGAGTTCA

consensusID : consensus_14573#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 413
fasta sequence

                              [GTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATTGACCATGAAAAGAAAAGAACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGTTTGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAACACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAAGAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTGGTGGGCAGTTAGATCCGTTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTACGTCTTGTACAGGTGATGTTTTGCTCTAGTTTGCAACGTTACCTGGATGAGTCCTAAGGCTAATTTTGCTC]

[+] EMBL CA763836             [GTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATTGACCATGAAAAGAAAAGAACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGTTTGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAACACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAAGAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTGGTGGGCAGTTAGATCCGTTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTACGTCTTGTACAGGTGATGTTTTGCTCTAGTTTGCAACGTTACCTGGATGAGTCCTAAGGCTAATTTTGCTC]




>consensus_14573#1
GTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATT
GACCATGAAAAGAAAAGAACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGTT
TGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAA
CACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAA
GAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTGGTGGGCAGTTA
GATCCGTTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTACGTCTTGTACAGGTGATG
TTTTGCTCTAGTTTGCAACGTTACCTGGATGAGTCCTAAGGCTAATTTTGCTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14573#0      AGGGTTTCCTCCTCGCCGCCGTCGCGTGGCGCGATGGCCGCCCCGCCGCCTTCCTCCCCG 60
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      TCGCCGCCGCCGGCGGCGGCGGCTGCGGCGACGCAGCAGACGCAGCCGCACCCGCAGACG 120
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      CCGTTCTACGAGCTCGTCAAGGGAAACTCCGGCATCGAGAAGGTCCTTCTCCGCGGCACG 180
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      CGCGGCTTCTCCGCTGAGGTCTATCTTTATGGAGCTCAAGTAACCTCATGGAAGAATGAC 240
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      CATGCGGAGGAGTTGCTTTTTGTCAGCAGTAAGGCTATTTTCAAACCTCCAAAAGCCATT 300
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      CGTGGTGGGATACCCATTTGCTTCCCCCAATTTGGAACACATGGAAATCTTGAACAACAT 360
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      GGATTTGCAAGGAACCGATTATGGACTATTGATGATAATCCACCACCTTTACCAGTAAAC 420
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      CCTGCTATTAAATCTTTTGTTGATCTGATTCTGAGGCCTTCTGACGAGGATTTAAAGATC 480
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      TGGCCTCACAGTTTTGAGTTCCGCTTGAGAGTTGCTCTTGGTCCTAATGGGGATTTGAGT 540
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      CTCACTTCTCGAATTAGGAATACCAACACTGATGGAAGATCTTTCTCTTACACATTTGCA 600
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      TATCACACATACTTCTCTGTCTCTGACATCAGTGAAGTGCGTGTTGAAGGGCTGGAAACA 660
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      ATGGACTACCTTGACAATTTGAAGGGAAAGGAGCGTTTTACAGAGCAAGGGGATGCTATT 720
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      GTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATT 780
consensus_14573#1      GTATTTGAATCAGAGATTGATAAGGTATACCTTGCTGCACCTTCAAAAATTGCAATTATT 60
                       ************************************************************

consensus_14573#0      GATCATGAAAAGAAAAGGACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGTT 840
consensus_14573#1      GACCATGAAAAGAAAAGAACATTTGTCTTGACAAAAGAAGGACTTCCAGATGCTGTTGTT 120
                       ** ************** ******************************************

consensus_14573#0      TGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAA 900
consensus_14573#1      TGGAACCCTTGGGACAAGAAGGCAAAAGCTATGCAAGATTTTGGAGATGGAGAATACAAA 180
                       ************************************************************

consensus_14573#0      CACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAA 960
consensus_14573#1      CACATGCTTTGTGTGGAGCCTGCAGCTGTTGAGAAGCCTATTACTCTGAAGCCAGGTGAA 240
                       ************************************************************

consensus_14573#0      GAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTAGTGGGCAGTTA 1020
consensus_14573#1      GAGTGGAAAGGAAGACTTGCACTCTCAGCTGTTCCTTCCAGTTACTGTGGTGGGCAGTTA 300
                       ************************************************ ***********

consensus_14573#0      GATCCATTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTGCGTCTTGTACAGGAG-CA 1079
consensus_14573#1      GATCCGTTGAAGGTCCTTCAAGGTTGAGAATTCTCATTTCTACGTCTTGTACAGGTGATG 360
                       ***** *********************************** ************* *   

consensus_14573#0      CCTCATTGCCCTTAATATTTGATGCTGGGCTGGCGCGCGACCTTTTCTTTCTTTGCCATT 1139
consensus_14573#1      TTTTGCTCTAGTTTGCAACGTTACCTGGATGAGTCCTAAGGCTAATTTTGCTC------- 413
                         *   *    **   *       ****    *  *     **  * ** **        

consensus_14573#0      TTAAATCCCCCGTGCTTCGTTCTTTTTTTGTACCTAGAAGTGAGTAGTAGGGTACCTCCG 1199
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      AAATAACAGACTGTGCCACCTGCTTCGACCCTAGAGCGGATCATCTCCTTGGTGAATGAA 1259
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      TTCGACCAGTGGACACAAGCCATTCGTGCCCTGGTGATATGATTCATCGTCCATATTCCA 1319
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      GGAAATATTCGCCATGCTGCATAAGGTCCGTAGCATTCTCAGTTAATCTGTAGTTATGAT 1379
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      CATTGGGAGCATTTGAGTTACACTGGCTTGCTACTGTGCTTCAAAGCCTAGTTCTTTGCC 1439
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      TCCTTGTGCAAACGCCTCTAAAGAATGATGTCAGGTGCAGCTAGTAGTAATATGTTGTCA 1499
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      ATACATGAGAATTGAGTATCGACTGTTTTGAGTCGCCTTGGGTAAGGCCCAGTTTGGATC 1559
consensus_14573#1      ------------------------------------------------------------
                                                                                   

consensus_14573#0      AAAGCATATTTTGCATGAGTTCA 1582
consensus_14573#1      -----------------------