These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14613#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 2169 fasta sequence [GATACGCGACAAAACAAATCCGCCCCCGAGAAAAGGAGGCCACGAAATTACGAGAATGCCACTCAACCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA-TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGGACCTACGATGATCCGAGCAGCAGCTAAGAATCATAAGGATGTTCTTGTTATGGTGGATCATGAAGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG-TGTCCGAGAGAGCT-CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG-AAAAAAAACAT-GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC-ACTGGTGTGACAGAATTTGATCAGCTTGACA-TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTACTC-----AAAAAAAAAAAGGCGAAGGGCGGGAGGTCCATACTGATATATTGACCGTGCCCGCTAGCCCAGGNAGC] [+] EMBL AK102764 [GATACGCGACAAAACAAATCCGCCCCCGAGAAAAGGAGGCCACGAAATTACGAGAATGCCACTCAACCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGGACCTACGATGATCCGAGCAGCAGCTAAGAATCATAAGGATGTTCTTGTTATGGTGGATCATGAAGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAG ] [+] EMBL AK064336 [ ACGCGACAAAACAAATCCGCCCCCGAGAAAAGGAGGCCACGAAATTACGAGAATGCCACTCAACCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGC GGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCGAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGTATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGGACCTACGATGATCCGAGCAGCAGCTAAGAATCACAAGGATGTTCTTGTTATGGTGGATCATGAAGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGATGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGC AAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTACTC AAAAAAAAAA ] [+] EMBL CB639314 [ CCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGC GGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTCCAAAAGTTGAACAAGTTGCAAATTTTTCCTGAAATGCTTGATGGTGGAGTTAAA ] [+] EMBL CB637911 [ aGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGGACCTACGATGATCC ] [+] EMBL CB637925 [ aGTCTGCGCCGGCGTGCGCGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAGCTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGAGGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGATATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTTTTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTACAAAAGTTGAACAAATTACAAA TTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCACCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATTGAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAACAAAGTCACCTCTGGTGTAA ] [+] EMBL CB662615 [ AGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCANGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCTCCCTC AGACAGTGAGCTCTCTGATGCCAAATTTG ] [+] EMBL CB662682 [ AGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCGCAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGAATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCTGTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGGGGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGGGAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGAGTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCGACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGGTGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATTCAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAG ] [+] EMBL OS1321694 [ gccntnGTAAAGGNAGATCCTNTTAGTCCATTTGGTGGGATAGTTNCTTTCAATACGACAATTGATGAGGATCTTCCAAAANAAATCCGTGAATTCAGGAGCCCTACAGATGGACANACGCGAATTTNCTACGANATTNTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAGTTTTCCGANAGANCT CCTC ] [+] EMBL BP185076 [ AGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTATACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAAAACATGGGGCATGTCAG ] [-] EMBL CB662616 [ TTGCACCCGGCTATACAGAGAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGTTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTTTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTAATAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTAC ] [+] EMBL BM419401 [ ATACAGAAAAGGGTC TGAGATCCTCAAA GGAAATCAAAGACATTGAGGATACTGGAGGCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCAC ACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCC AACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAA ] [+] EMBL BM419546 [ aATTGAGGATACTGGA GCGAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGCCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAA ] [-] EMBL CB662683 [ AAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCAAGAGTCTGATGATCTAACCCATGAAGATATCACCTTCACAACAG TGTCCGAGAGAGCT CCTCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAATCAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGATGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAAAGACGCCGTGGAGGAGGCGTGCCAGAACGGCATAGGCGTGATTGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGTCTGTTGCAACAAGTAGGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCTCTGAGCTAGATAGCCTCATGAACCTTGATGTTCATGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATGGATCGCTCTTTTTGTATCACAAGAGCATGCAGATGGTCCAGCGTTTGATCACCCTGTGAAAAACTCTTGACGGATTGTAATAGGCTGCCTGCCAAGTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGT ] [+] EMBL CA757373 [ GCCTGGCTTTGTGTAAAGCACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGNGNGACAGAATTTGATCAGCTTGACATTTTTGCACTAGGATTCATGGTGATAATAAGATTAGGATGGCCCGTACTCGTTCTAAAAAAAGGAAGGCGAAGGGCGGGAGGTCCATACTGATATATTGACCGTGCCCGCTAGCCCAGGNAGC] [-] EMBL CB637926 [ CACGTAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCATGGTGATAATAAGATTAGGATGT ] [-] EMBL CB637912 [ TAAAGAGTAACGCCATTGTGATAGCCAAGAATAACTGCATGTTAGGCATGGGAAGTGGCCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGG AAAAAAAACAT GGGCATGTCAGATCGATCGCTCTTTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCC ACTGGTGTGACAGAATTTGATCAGCTTGACA TTTTGCAATAAGATTCAT ] consensusID : consensus_14613#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 670 fasta sequence [TTTCACTCACNGGTGCCGGGGGGCTCCCGTTCTCGGCGCTGGGGTTTTTTNTGTGCGCANTGGTCTCGGGTCTTGTTGTTTATTGATCCTTNTTNTGGGTGGTACCCCCGTTGTGTGTTTGCCCTGGATTTCCGCGCCAGTGTTTAGGCCTTGGGGAAGTGNCCATCCCTCCTGACTGGAGATTCTGAGAATGCCTTTCAGGAAACAGGAGAGAAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGTACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAAACATGGGCATGTCAGATCGATCGCTCTTGTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCCACCTGGTGTGACAGAATTTGATCAGCTTGACCTTTTCCATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTACTCATTCTAAAAAAAAAAA] [+] EMBL BM038613 [TTTCACTCACNGGTGCCGGGGGGCTCCCGTTCTCGGCGCTGGGGTTTTTTNTGTGCGCANTGGTCTCGGGTCTTGTTGTTTATTGATCCTTNTTNTGGGTGGTACCCCCGTTGTGTGTTTGCCCTGGATTTCCGCGCCAGTGTTTAGGCCTTGGGGAAGTGNCCATCCCTCCTGACTGGAGATTCTGAGAATGCCTTTCAGGAAACAGGAGAGAAGGCCAAAGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGAGGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGTACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACTTCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAAACATGGGCATGTCAGATCGATCGCTCTTGTCTGTATCACAAGAGCATGCAGATCGACCAGCGTTTGATCACCCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCCACCTGGTGTGACAGAATTTGATCAGCTTGACCTTTTCCATAAGATTCATGGTGATAATAAGATTAGGATGTCTCGTACTCATTCTAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14613#0 GATACGCGACAAAACAAATCCGCCCCCGAGAAAAGGAGGCCACGAAATTACGAGAATGCC 60 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 ACTCAACCTCGCCTCCTCTCCCGCCGCCGCCGCCGCCGCCAAGGTCTGCGCCGGCGTGCG 120 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 CGCGTCCCCGCGCCACCTCCTCCCCCGCGCTCTTGACCACCAGAGCCGCCGCGTCCTCAG 180 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 CTTGTCGTCCTCGTCGTCGGCGGGGCGTGCGGCGGGTGTGCGGGCCATGGCCGCGGCGGA 240 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 GGCCGGTGCGTCGACGGCGACACAGGCTAAGTCGAGCGCAGGAGTCAAACAAGCACTGAT 300 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 ATCATTGTCGGATAAAACAGACTTGGCCTATCTTGGGAATGGCCTTCAAGCCTTGGGGTT 360 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 TTCTATTATTTCGACTGGTGGCACAGCATCAAGCCTGGAAGCAGCTGGAGTTAATGTTAC 420 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 AAAAGTTGAACAAATTACAAATTTTCCTGAAATGCTTGATGGTAGAGTTAAAACATTGCA 480 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 CCCCAGTGTACATGGTGGTATTCTTGCAAGAAGAGACCAGGAGCATCATCTTAAGGCATT 540 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 GAATGAGCATGGCATTGGGACATTTGATGTGGTTGTGGTGAACTTGTATCCATTCTATAA 600 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 CAAGGTCACCTCTGGTGTAATTTCTTTCGAGGATGGCATTGAAAACATTGATATCGGTGG 660 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 ACCTACGATGATCCGAGCAGCAGCTAAGAATCATAAGGATGTTCTTGTTATGGTGGATCA 720 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 TGAAGATTACCCTGCTCTATTAGAGTATCTGCAAGGAAAACAAGATGACCAGCAATTCCG 780 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 CAAGATGCTAGCATGGAAAGCTTTCCAACATGTCGCTTCTTATGATTCAGCTGTCTCAGA 840 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 ATGGTTGTGGAAGCAATCGAACAAAGGAGATGTATTCCCCCCGAACTTCACCGTGCCCCT 900 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 GTCCCTGAAATCTACACTTCGTTATGGTGAAAATCCTCATCAAAAAGCTGCCTTCTATGG 960 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 GGACAAGAGTCTTTCTGTAGTTAATGCTGGTGGTATTGCAACAGCAATTCAGCACCATGG 1020 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 GAAGGAAATGTCTTACAACAACTACTTAGATGCGGATGCTGCATGGAACTGTGTATCAGA 1080 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 GTTTGAGAGTCCTACGTGTGTTGTGGTTAAGCACACAAATCCATGTGGAGTAGCATCCCG 1140 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 ACAGGATATTCTTGAAGCATACAGGTTGGCTGTAAAGGGAGATCCTGTTAGTGCATTTGG 1200 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 TGGGATAGTTGCTTTCAATACGACAATTGATGAGGATCTTGCAAAAGAAATCCGTGAATT 1260 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 CAGGAGCCCTACAGATGGACAGACGCGAATGTTCTACGAGATTGTTGTTGCACCCGGCTA 1320 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 TACAGAAAAGGGTCTTGAGATCCTCAAAGGGAAATCAAAGACATTGAGGATACTGGAGGC 1380 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 GAAGAGAAGTGGAAAAGGGATGCTATCACTCAGGCAAGTCAGTGGTGGCTGGTTGGCTCA 1440 consensus_14613#1 ------------------------------------------------------------ consensus_14613#0 AGAGTCTGATGATCTAACCCCTGAAGATATCACCTTCACAACAGTGTCCGAGAGAGCTCC 1500 consensus_14613#1 ----TTTCACTCACNGGTGCCGGGGGGC-TCCCGTTCTCGGCGCTG-------GGGTTTT 48 * * * * ** * * ** * *** * * ** * * * consensus_14613#0 TCAAGACAGTGAGCTCTCTGATGCCAAATTTGCCTGGCTTTGTGTAAAGCACGTAAAGAG 1560 consensus_14613#1 TTN------TGTGCGCANTGGTCTCGGGTCTTGTTGTTTATTGATCCTTNTTNTGGGTGG 102 * ** ** * ** * * * * ** * * * * * consensus_14613#0 TAACGCCATTGTGA--TAGCCAAGAATAACTGCATG-----TTAGGCAT--GGGAAGTGG 1611 consensus_14613#1 TACCCCCGTTGTGTGTTTGCCCTGGATTTCCGCGCCAGTGTTTAGGCCTTGGGGAAGTGN 162 ** * ** ***** * *** * ** * ** ****** * ******** consensus_14613#0 CCAGCCAAACAGACTGGAGAGTCTGAGAATTGCTTTCAGGAAAGCAGGAGAGGAGGCCAA 1671 consensus_14613#1 CCATCCCTCCTGACTGGAGATTCTGAGAATGCCTTTCAGGAAA-CAGGAGAGAAGGCCAA 221 *** ** * ********* ********* *********** ******** ******* consensus_14613#0 AGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGAGGA 1731 consensus_14613#1 AGGAGCTGCTTTGGCCAGTGATGCATTCTTCCCATTCGCTTGGAACGACGCCGTGGATGA 281 ********************************************************* ** consensus_14613#0 GGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCG- 1790 consensus_14613#1 GGCGTGCCAGAACGGCATCGGCGTGATCGCGGAGCCGAGCGGCAGCATGAGGGACGGCGT 341 *********************************************************** consensus_14613#0 ACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACT 1850 consensus_14613#1 ACGCCGTCGACTGCTGCAACAAGTACGGCGTCTCCCTCCTCTTCACCGGCGTCAGGCACT 401 ************************************************************ consensus_14613#0 TCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAA 1910 consensus_14613#1 TCAGGCACTGAGCTAGCTAGCCTCATGAACCTTGATCTTCCTGCAAAAAAAGGAAAAAAA 461 ************************************************************ consensus_14613#0 ACATGGGCATGTCAGATCGATCGCTCTT-TCTGTATCACAAGAGCATGCAGATCGACCAG 1969 consensus_14613#1 ACATGGGCATGTCAGATCGATCGCTCTTGTCTGTATCACAAGAGCATGCAGATCGACCAG 521 **************************** ******************************* consensus_14613#0 CGTTTGATCACC-TTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCCAC-TGGT 2027 consensus_14613#1 CGTTTGATCACCCTTGAGAAAAACTCTTGACGGCTTGTACTAGGCTGCCTGCCACCTGGT 581 ************ ****************************************** **** consensus_14613#0 GTGACAGAATTTGATCAGCTTGACATTTTGCAATAAGATTCATGGTGATAATAAGATTAG 2087 consensus_14613#1 GTGACAGAATTTGATCAGCTTGACCTTTTCCA-TAAGATTCATGGTGATAATAAGATTAG 640 ************************ **** ** *************************** consensus_14613#0 GATGTCTCGTACTCAAAAAAAAAAAGGCGAAGGGCGGGAGGTCCATACTGATATATTGAC 2147 consensus_14613#1 GATGTCTCGTACTCATTCTAAAAAAAAAAA------------------------------ 670 *************** ****** * consensus_14613#0 CGTGCCCGCTAGCCCAGGNAGC 2169 consensus_14613#1 ---------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||