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Oryza sativa
cluster # 14617 cluster # 14617       Sequences # 17       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14617#0 length = 1282 sequences # 11  
consensus_14617#1 length = 472 sequences # 6  

consensusID : consensus_14617#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1282
fasta sequence
                              [TGGGAGCTCCTACAAATAGGAGAAACAGTCAGGGAGACCAAACCCTAAAACCCCGCATCCACTGCCATGGCGGCCGTGCAGCGACTCCTGCGGGCGTCCGCCTCCGGTGGCGCGGCGGCGGCGGCGGCGGCGGCGAGGAGGCGCATGTCCACGGCGGTGGCGCCGGAGCAGACGCCTGCGGCCGCGGCGTTCCCGTTCGCGGCGGCGGCGGGGAGGGCGAGGCAGCGGGTGGCGGAGGAGAGGAACGTGCAGTGGGTGTTCCTCGGGTGCCCCGGCGTGGGCAAGGGGACTTATGCCAGCCGCCTCTCCCGCCTCCTCGGCGTGCCCCACATCGCCACCGGGGATCTCGTCCGCGACGAGCTCGCTTCCTCCGGCCCCCTATCTGTGCAGCTTGCTGAAATTGTTAATCAGGGGAAATTAGTTTCTGATGAAATTATCATCAATCTGTTATCTAAACGTCTTAAGAAAGGAGAAGAGCA-GGGGGAATCGGGATTTATTCTGGATGGTTTTCCACGTACTGTAAAAC-AAGCGGAAATTCTTGATGGAGTTACTGACATTGATATGGTGGTCAATCTAAAGTTGAGAGAGGATGTCCTAGTTGAGAAGTGCCTTGGCAGACGTATTTGTGGCCAATGTGGAAAGAACTTCAATTTGGCCTGCATTGATGTGAAGGGTGAAAATGGGCTGCCACCAATCTACATGGCACCACTATTGCCCCCAAATAACTGTATGTCAAAGCTTATCACCAGAGCTGATGATACCGAAGAGGTCGTGAGAAATCGTCTTCAGATATATAATGACATGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAATTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACTGTTGTCTTTTACTAAAAAA]

[+] EMBL AK070255             [TGGGAGCTCCTACAAATAGGAGAAACAGTCAGGGAGACCAAACCCTAAAACCCCGCATCCACTGCCATGGCGGCCGTGCAGCGACTCCTGCGGGCGTCCGCCTCCGGTGGCGCGGCGGCGGCGGCGGCGGCGGCGAGGAGGCGCATGTCCACGGCGGTGGCGCCGGAGCAGACGCCTGCGGCCGCGGCGTTCCCGTTCGCGGCGGCGGCGGGGAGGGCGAGGCAGCGGGTGGCGGAGGAGAGGAACGTGCAGTGGGTGTTCCTCGGGTGCCCCGGCGTGGGCAAGGGGACTTATGCCAGCCGCCTCTCCCGCCTCCTCGGCGTGCCCCACATCGCCACCGGGGATCTCGTCCGCGACGAGCTCGCTTCCTCCGGCCCCCTATCTGTGCAGCTTGCTGAAATTGTAAATCAGGGGAAATTAGTTTCTGATGAAATTATCATCAATCTGTTATCTAAACGTCTTAAGAAAGGAGAAGAGCA GGGGGAATCGGGATTTATTCTGGATGGTTTTCCACGTACTGTAAAAC AAGCGGAAATTCTTGATGGAGTTACTGACATTGATATGGTGGTCAATCTAAAGTCGAGAGAGGATGTCCTAGTTGAGAAGTGCCTTGGCAGACGTATTTGTGGCCAATGTGGAAAGAACTTCAATTTGGCCTGCATTGATGTGAAGGGTGAAAATGGGCTGCCACCAATCTACATGGCACCACTATTGCCCCCAAATAACTGTATGTCAAAGCTTATCACCAGAGCTGATGATACCGAAGAGGTCGTGAGAAATCGTCTTCAGATATATAATGACATGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAATTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGA                                                                                                            ]
[+] EMBL BE040935             [                                                                CCATGGCGGCCGTGCAGCGACTCCTGCGGGCGTCCGCCTCCGGTGGC      GCGGCGGCGGCGGCGGCGAGGAGGCGCATGTCCACGGCGGTGGCGCCGGAGCAGACGCCTGCGGCCGCGGCGTTCCCGTTCGCGGCGGCGGCGGGGAGGGCGAGGCAGCGGGTGGCGGAGGAGAGGAACGTGCAGTGGGTGTTCCTCGGGTGCCCCGGCGTGGGCAAGGGGACTTATGCCAGCCGCCTCTCCCGCCTCCTCGGCGTGCCCCACATCGCCACCGGGGATCTCGTCCGCGACGAGCTCGCTTNCTCCGGCCCCCTATCTGTGCAGCTTGCTGAAATTGTTAATCAGGGGAAATTAGTTTCTGATGAAATTATCATCAATCTGTTATCTAAACGTCTTAAGAAAGGAGAAGAGCAGGGGGGAATCGGGATTTATTCTGGATGGTTTTTCACGTACTGTAAAACAAAGCGG AATT TTGATGGAG TACTGACATTGATATGG GGTCAA CTAAA TTGAGAGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB658735             [                                                                             GCAGCGACTCCTGCGGGCGTCCGCCTCCGGTGGCGCGGCGGCGGCGGCGGCGGCGGCGAGGAGGCGCATGTCCACGGCGGTGGCGCCGGAGCAGACGCCTGCGGCCGCGGCGTTCCCGTTCGCGGCGGCGGCGGGGAGGGCGAGGCAGCGGGTGGCGGAGGAGAGGAACGTGCAGTGGGTGTTCCTCGGGTGCCCCGGCGTGGGCAAGGGGACTTATGCCAGCCGCCTCTCCCGCCTCCTCGGCGTGCCCCACATCGCCACCGGGGATCTCGTCCGCGACGAGCTCGCTTCCTCCGGCCCCCTATCTGTGCAGCTTGCTGAAATTGTTAATCAGGGGAAATTAGTTTCTGATGAAATTATCATCAATCTGTTATCTAAACGTCTTAAGAAAGGAGAAGAGCA GGGGGAATCGGGATTTATTCTGGATGGTTTTCCACGTACTGTAAAAC AAGCGGAAATTCTTGATGGAGTTACTGACATTGATATGGTGGTCAATCTAAAGTTGAGAGAGGATGTCCTAGTTGAGAAGTGCCTTGGCAGACGTATTTGTGGCCAATGTGGAAAGAACTTCAATTTGGCCTGCATTGATGTGAAGGGTGAAAATGGGCTGCCACCAATCTACATGGCACCACTATTGCCCCCAAATAACTGTATGTCAAAGCTTATCACCAGAGCTGATGATACCGAAGAGGTCGTGAGAAATCGTCTTCAGATATATAATGACATGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCT                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU065232             [                                                                                                                                                                                                                                                                                               GACTTATGCCAGCCGCCTCTCCCGCCTCCTCGGCGTGCCCCACATCGCCACCGGGGATCTCGTCCGCGACGAGCTCGCTTCCTCCGGCCCCCTATCTGTGCAGCTTGCTGAAATTGTTAATCAGGGGAAATTAGTTTCTGATGAAATTATCATCAATCTGTTATCTAAACGTCTTAAGAAAGGAGAAGAGCA GGGGGAATCGGGATTTATTCTGGATGGTTTTCCACGTACTGTAAAAC AAGCGGAAATTCTTGATGGAGTTACTGACATTGATATGGTGGTCAATCTAAAGTTGAGAGAGGATGTCCTAGTTGAGAAGTGCCTTGGCAGACGTATTTGTGGCCAATGTGGAAAGAACTTCAATTTGGCCTGCATTGATGTGAAGGGTGAAAATGGGCTGCCACCAATCTACATGGCACCACTATTGCCCCCAAATAACTGTATGTCAAAGCTTATCACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL OSC9101              [                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTATCTAAACGTCTTAAGAAAGGAGAAGAGCA GGGGGAATCGGGATTTATTCTGGATGGTTTTCCACGTACTGTAAAAC AAGCGGAAATTCTTGATGGAGTTACTGACATTGATATGGTGGTCAATCTAAAGTTGAGAGAGGATGTCCTAGTTGAGAAGTGCCTTGG AGACGTATTTGTGGCCAATGTGGAAAGAACTTCAATTTGGCCTGCATTGATGTGAAGGGTGAAAATGGGCTGCCACCAATCTACATGGCACCACTATTGCCCCCAAATAACTGTATGTCAAAGCTTATCACCAGAGCTGATGATACCGAAGAGGTCGTGAGAAATCGTCTTCAGATATATAATGACATGAGCC ACCTNTTGAGGG TTCTACC GC ACAGGGGANGCTTTTAG ATTTGATTTnct                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB658736             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGACATTGATATGGTGGTCAATCTAAAGTTGAGAGAGGATGTCTTAGTTGAGAAGTCCCTTGGCAGACGTATTTGTGGCCAATGTGGAAAGAACTTCAATTTGGCCTGCATTGATGTGAAGGGTGAAAATGGGCTGCCACCAATCTACATGGCACCACTATTGCCCCCAAATAACTGTATGTCAAAGCTTATCACCAGAGCTGATGATACCGAAGAGGTCGTGAGAAATCGTCTTCAGATATATAATGACATGAGCCACCCTGTTGAGGGTTTTTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTTTTGGCCAAAGCTGCTCCATGTTTTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACCCCCCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAATTAAAGTTTGCCCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCTATATTCATGATAGATCCATTGGTCAATTATGACTAGATAGTAGTAATG                                  ]
[-] EMBL CB966828             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGATACCGAAGAGGTCGTGAGAAATCGTCTTCAGATATATAATGACATGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACTGTTG               ]
[+] EMBL AK058635             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAATTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGA                                                                                                            ]
[+] EMBL AU078241             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAATTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACTGTTGTCTTTTACTAAAAAA]
[+] EMBL AK059424             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAATTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCTATATTCATGATAGA                                                                    ]
[+] EMBL OSC6241              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGATGAAGNTGGCCACTNCGTAAGCCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGAAAAAAAGAGCAAAAACTTATTCCATAATGTGTNCGTTTGTAGAATTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTaaaaaaa                                                                                                                            ]


>consensus_14617#0 TGGGAGCTCCTACAAATAGGAGAAACAGTCAGGGAGACCAAACCCTAAAACCCCGCATCC ACTGCCATGGCGGCCGTGCAGCGACTCCTGCGGGCGTCCGCCTCCGGTGGCGCGGCGGCG GCGGCGGCGGCGGCGAGGAGGCGCATGTCCACGGCGGTGGCGCCGGAGCAGACGCCTGCG GCCGCGGCGTTCCCGTTCGCGGCGGCGGCGGGGAGGGCGAGGCAGCGGGTGGCGGAGGAG AGGAACGTGCAGTGGGTGTTCCTCGGGTGCCCCGGCGTGGGCAAGGGGACTTATGCCAGC CGCCTCTCCCGCCTCCTCGGCGTGCCCCACATCGCCACCGGGGATCTCGTCCGCGACGAG CTCGCTTCCTCCGGCCCCCTATCTGTGCAGCTTGCTGAAATTGTTAATCAGGGGAAATTA GTTTCTGATGAAATTATCATCAATCTGTTATCTAAACGTCTTAAGAAAGGAGAAGAGCAG GGGGAATCGGGATTTATTCTGGATGGTTTTCCACGTACTGTAAAACAAGCGGAAATTCTT GATGGAGTTACTGACATTGATATGGTGGTCAATCTAAAGTTGAGAGAGGATGTCCTAGTT GAGAAGTGCCTTGGCAGACGTATTTGTGGCCAATGTGGAAAGAACTTCAATTTGGCCTGC ATTGATGTGAAGGGTGAAAATGGGCTGCCACCAATCTACATGGCACCACTATTGCCCCCA AATAACTGTATGTCAAAGCTTATCACCAGAGCTGATGATACCGAAGAGGTCGTGAGAAAT CGTCTTCAGATATATAATGACATGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGG AAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCAT GTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCT GGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCA AAAACTTATTCCATAATGTGTGCGTTTGTAGAATTAAAGTTTGACCAAAAGTGATTCATT TTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAA TTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCT ATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGT ACTGTTGTCTTTTACTAAAAAA



consensusID : consensus_14617#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 472
fasta sequence
                              [TGAACTTTGCAGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGA--GCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACTG]

[-] EMBL BU673637             [TGAACTTTGCAGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGA  GCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACTG]
[-] EMBL BU672936             [TGAACTTTGCAGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCNAAAACTTATTCCATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGA  GCTATATTCATGATAGATACATTGGTC ATTATGACTATATAGTAGTAATGCATTTTCACTGTACTG]
[-] EMBL CB964522             [TGAACTTTGCAGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCNATGAATTTACACACCGCNATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCCAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGA  GCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACT ]
[-] EMBL CB965014             [TGAACTTTGCAGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATCTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGA  GCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACT ]
[-] EMBL CB964740             [TGAACTTTGCAGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAATTTGATTTGCCTGNGGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCCATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCNAAAGTGATTCATTTTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGA  GCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACT ]
[-] EMBL BU673098             [                                                                                                                                                                                                                                                                                                                                                                                     AGAACAGGACTTCATCAGGATATGATGCGAGANNGCTATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACTG]


>consensus_14617#1 TGAACTTTGCAGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGGAAGCTTTTAGAA TTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCATGTTCTAAATCTC GAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCTGGCTTTACATTG GGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCAAAAACTTATTCC ATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCAAAAGTGATTCATTTTCGCCGGTGTT TTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAATTTCTTGTTTTG ATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCTATATTCATGATA GATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGTACTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14617#0      TGGGAGCTCCTACAAATAGGAGAAACAGTCAGGGAGACCAAACCCTAAAACCCCGCATCC 60
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      ACTGCCATGGCGGCCGTGCAGCGACTCCTGCGGGCGTCCGCCTCCGGTGGCGCGGCGGCG 120
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      GCGGCGGCGGCGGCGAGGAGGCGCATGTCCACGGCGGTGGCGCCGGAGCAGACGCCTGCG 180
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      GCCGCGGCGTTCCCGTTCGCGGCGGCGGCGGGGAGGGCGAGGCAGCGGGTGGCGGAGGAG 240
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      AGGAACGTGCAGTGGGTGTTCCTCGGGTGCCCCGGCGTGGGCAAGGGGACTTATGCCAGC 300
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      CGCCTCTCCCGCCTCCTCGGCGTGCCCCACATCGCCACCGGGGATCTCGTCCGCGACGAG 360
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      CTCGCTTCCTCCGGCCCCCTATCTGTGCAGCTTGCTGAAATTGTTAATCAGGGGAAATTA 420
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      GTTTCTGATGAAATTATCATCAATCTGTTATCTAAACGTCTTAAGAAAGGAGAAGAGCAG 480
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      GGGGAATCGGGATTTATTCTGGATGGTTTTCCACGTACTGTAAAACAAGCGGAAATTCTT 540
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      GATGGAGTTACTGACATTGATATGGTGGTCAATCTAAAGTTGAGAGAGGATGTCCTAGTT 600
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      GAGAAGTGCCTTGGCAGACGTATTTGTGGCCAATGTGGAAAGAACTTCAATTTGGCCTGC 660
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      ATTGATGTGAAGGGTGAAAATGGGCTGCCACCAATCTACATGGCACCACTATTGCCCCCA 720
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      AATAACTGTATGTCAAAGCTTATCACCAGAGCTGATGATACCGAAGAGGTCGTGAGAAAT 780
consensus_14617#1      ------------------------------------------------------------
                                                                                   

consensus_14617#0      CGTCTTCAGATATATAATGACATGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGG 840
consensus_14617#1      ------------TGAACTTTGCAGAGCCAACCTGTTGAGGGTTTCTACCGGCAACAGGGG 48
                                   *  * *     *************************************

consensus_14617#0      AAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCAT 900
consensus_14617#1      AAGCTTTTAGAATTTGATTTGCCTGGAGGAATCCCTGAGTCTTGGCCAAAGCTGCTCCAT 108
                       ************************************************************

consensus_14617#0      GTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCT 960
consensus_14617#1      GTTCTAAATCTCGAGGACCAAGAAGAGATGAAGCTGGCCACTGCGTAAGGCCATGGGGCT 168
                       ************************************************************

consensus_14617#0      GGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCA 1020
consensus_14617#1      GGCTTTACATTGGGCCAATGAATTTACACACCGCAATTTTGAATAATGGAAAAAAGAGCA 228
                       ************************************************************

consensus_14617#0      AAAACTTATTCCATAATGTGTGCGTTTGTAGAATTAAAGTTTGACCAAAAGTGATTCATT 1080
consensus_14617#1      AAAACTTATTCCATAATGTGTGCGTTTGTAGAAGTAAAGTTTGACCAAAAGTGATTCATT 288
                       ********************************* **************************

consensus_14617#0      TTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAA 1140
consensus_14617#1      TTCGCCGGTGTTTTGATGAGCCGGTACACTGTAACTGTCATGTTGAGATGTTAATCTTAA 348
                       ************************************************************

consensus_14617#0      TTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCT 1200
consensus_14617#1      TTTCTTGTTTTGATTTAGCCTGCTGAGAACAGGACTTCATCAGGATATGATGCGAGAGCT 408
                       ************************************************************

consensus_14617#0      ATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGT 1260
consensus_14617#1      ATATTCATGATAGATACATTGGTCAATTATGACTATATAGTAGTAATGCATTTTCACTGT 468
                       ************************************************************

consensus_14617#0      ACTGTTGTCTTTTACTAAAAAA 1282
consensus_14617#1      ACTG------------------ 472
                       ****                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)