These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14621#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1338 fasta sequence [AGAACAAAGGTGGAGACTGCGATTCACTTCCACTCCCTTCCCCACTGCCTTCCTCCTCTCACTCTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCCTCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGGTGGCCACCAAGTTCGGGA-TTCGGCGGGGCGCCGACGGCGTGCGCGCCGTGTGCGGCCGGCCGGAGTACGTGCGCGCCTGCTGCGAGGCCAGCCTCGGCCGCCTCGGCGTCGACTACATCGACCTCTACTACCAGCACCGCGTCGACACCACCATCCCCATCGAGGACACGATTGGTGAGCTCAAGAAATTGGTGGAGGAGGGGAAGGTGAGGTACATTGGGCTATCGGAGGCGAGCCCTGACACCATCAGGCGAGCTCATGCCGTGCACCCAATCACTGCAGTTCAGATGGAGTGGTCTCTCTGGGCTCGTGACATTGAACCCGAAA-TTGTG-CCGCTCTGCAGGGAGTT-GGGCATTGGAATTGTT-CCCTACAGCCCTATCGCCCGCGGGTTTTTCGGAGGGAGAGGAGTGACAGAACAATTGTCTGCTGAAT-CTAATTTGCAAGGACAT-CCACGATTTTCTGCTGAAAATTTGGAGAAGAATAAACAGCTTTATCTGAAAACGGAAGAGCTGGCCAAGAAGCACCAGTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCCAATACCAGGAACAACCAAGATAAAAAACCTAGATGCCAACATTGACTCCTTAAAGGTGAACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCTGGTGGAAGACAGTATACCTCATTTGCACATTACACCTGGAAGTATGCTGACACGCCAAAGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCTTGTGAATGCTCTCTGCGGTTCTAATAATGTACTGCCAATAACAAATTACTGCACTTCCACTCGCCTTTGAGAGCTTCACGAAACATATAAAACTTGCTTAAGCACAAAAAAAAAAAAAAAAAA] [+] EMBL AK100460 [AGAACAAAGGTGGAGACTGCGATTCACTTCCACTCCCTTCCCCACTGCCTTCCTCCTCTCACTCTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGGCACCTCCGACGTCTACGGCCCCCTCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGGTGGCCACCAAGTTCGGGA TTCGGCGGGGCGCCGACGGCGTGCGCGCCGTGTGCGGCCGGCCGGAGTACGTGCGCGCCTGCTGCGAGGCCAGCCTCGGCCGCCTCGGCGTCGACTACATCGACCTCTACTACCAGCACCGCGTCGACACCACCATCCCCATCGAGGACACGATTGGTGAGCTCAAGAAATTGGTGGAGGAGGGGAAGGTGAGGTACATTGGGCTATCGGAGGCGAGCCCTGACACCATCAGGCGAGCTCATGCCGTGCACCCAATCACTGCAGTTCAGATGGAGTGGTCTCTCTGGGCTCGTGACATTGAACCCGAAA TTGTG CCGCTCTGCAGGGAGTT GGGCATTGGAATTGTT CCCTACAGCCCTATCGCCCGCGGGTTTTTCGGAGGGAGAGGAGTGACAGAACAATTGTCTGCTGAAT CTAATTTGCAAGGACAT CCACGATTTTCTGCTGAAAATTTGGAGAAGAATAAACAGCTTTATCTGAAAACGGAAGAGCTGGCCAAGAAGCACCAGTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCCAATACCAGGAACAACCAAGATAAAAAACCTAGATGCCAACATTGACTCCTTAAAGGTGAACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCTGGTGGAAGACAGTATACCTCATTTGCACATTACACCTGGAAGTATGCTGACACGCCAAAGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCTTGTGAATGCTCTCTGCGGTTCTAATAATGTACTGCCAATAACAAATTACTGCACTTCCACTCGCCTTTGAGAGCTTCACGAAACATATAAAAC ] [+] EMBL C91827 [ GCGATTCACTTCCACTCCCTTCCCCACTGCCTTCCTCCTCTCACTCTCACTCCCCCTGCGACCGCCGCCGAGAGG CATGGCGGAG AAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGATGACGACGCCGGCGCCG CGTCATCGCGCACGGCTTNCGCCGCGGCGTCAACTTCTTCGACAACTNCGACGTTTACGGCCCCTTNG CAACGAGATCCTCCTCGGCAAGGCGt ] [+] EMBL C25930 [ anTTCCACTCCCTTCCCCACTGCCTTCCTCCTCTCACTCTCACTCCCCCTGCGACCGCCGCCGAGA GNCATGGCGGA NAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCNTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCCTCGCCAACNAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGNAGGTGCAGGTGGCCANCAAGTTCGGGA TTCGGCGGGGCG CGACGG GTGCGCG CGTGTGCGGCCGGCC GAGTACGTTCGC ] [+] EMBL OSS2457A [ gcgnnCTTCCTCCTCTCACTCTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGA CAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGANGTCTANGGCCCCCTCGCC ] [+] EMBL OSS1928A [ cactTTCCTCCTCTCACTCTCACTCCCCCTGCGACCGCCGNCGAGA GNCATGGCGGAG AAGCTCCACTGGCGCCGATNCCTCGAGTCAAGCTCGGCACCCGNGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGTCGACGTCATCNNNCACGTCTTCCGTCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGNCCCCTCGNCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTNNCGNGGGAGAAGGTGCAGGTGGCCACCAAGNTCGGGATTTCGTCGTGG ] [+] EMBL C91647 [ TCCTCCTCTCACTCTCACTCCCCCTGCGACCGCCGCCGAGAGG CATGGCGGA NAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCG CGTCATCGCGCACGCCTTCCGCCGCGGCGTCAACTTCTTCGACACCTCCGACGTCTACGGGCCCCTCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAANCAGCTGCNGCGGGAACAGGTNCAGGTGGCCA CAANTTCGGGA TT GGCGGGGCGCCAAAGG GTTC CCCCGTNTTCGGCCGGCCGaatan ] [+] EMBL CB678382 [ TCCTCTCACTCTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCCTCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGGTGGCCACCAAGTTCGGGA TTCGGCGGGGCGCCGACGGCGTGCGCGCCGTGTGCGGCCGGCCGGAGTACGTGCGCGCCTGCTGCGAGGCCAGCCTCGGCCGCCTCGGCGTCGACTACATCGACCTCTACTACCAGCACCGCGTCGACACCACCATCCCCATCGAGGACACGATTGGTGAGCTCAAGAAATTGGTGGAGGAGGGGAAGGTGAGGTACATTGGGCTATCGGAGGCGAGCCCTGACACCATCAGGCGAGCTCATGCCGTGCACCCAATCACTGCAGCTCAGATGGAGTGGTCTCTCTGGGCTCGTGACATTGAACCCGAAA TTGTG CCGCTCTGCAAGGAGTT GGGCATTGGAATTGTT CCCTACAGCCCTATCac ] [+] EMBL CA753970 [ CTCTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCCTCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGGTGGCCACCAAGTTCGGGA TTCGGCGGGGCGCCGACGGCGTGCGCGCCGTGTGCGGCCGGCCGGAGTACGTGCGCGCCTGCTGCGAGGCCAGCCTCGGCCGCCTCGGCGTCGACTACATCGACCTCTACTACCAGCACCGCGTCGACACCACCATCCCCATCGAGGACACGATTGGTGAGCTCAAGAAATTGGTGGAGGAGGGGAAGGTGAGGTACATTGGGCTATCGGAGGCGAGCCCTGACACCATCAGGCGAGCTCATGCCGTGCACCCAATCACTGCAGNTCAGA ] [+] EMBL CB643522 [ CCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCCTCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGGTGGCCACCAAGTTCGGGA TTCGGCGGGGCGCCGACGGCGTGCGCGCCGTGTGCGGCCGGCCGGAGTACGTGCGCGCCTGCTGCGAGGCCAGCCTCGGCCGCCTCGGCGTCGACTACATCGACCTCTACTACCAGCACCGCGTCGACACCACCATCCCCATCGAGGACACGATTGGTGAGCTCAAGAAATTGGTGGAGGAGGGGAAGGTGAGGTACATTGGGCTATCGGAGGCGAGCCCTGACACCATCAGGCGAGCTCATGCCGTGCACCCAATCACTGCAGTTCAGATGGAGTGGTCTCTCTGGGCTCGTGACATTGAACCCGAAA TTGTG CCGCTCTGCAGGGAGTT GGGCATTGGAATTGTT CCCTACAGCCCTATCGCCCGCGGGTTTTTCGGAGGGAGAGGAGTGACAGAACAATTGTCTGCTGAAT CTAATTTGCAAGGACAT CCACGATTTTCTGCTGAAAATTTGGAGAAGAATAAAC ] [-] EMBL CB643523 [ GACACGATTGGTGAGCTCAAGAAATTGGTGGAGGAGGGGAAGGTGAGGTACATTGGGCTATCGGAGGCGAGCCCTGACACCATCAGGCGAGCTCATGCCGTGCACCCAATCACTGCAGTTCAGATGGAGTGGTCTCTCTGGGCTCGTGACATTGAACCCGAAA TTGTG CCGCTCTGCAGGGAGTT GGGCATTGGAATTGTT CCCTACAGCCCTATCGCCCGCGGGTTTTTCGGAGGGAGAGGAGTGACAGAACAATTGTCTGCTGAAT CTAATTTGCAAGGACAT CCACGATTTTCTGCTGAAAATTTGGAGAAGAATAAACAGCTTTATCTGAAAACGGAAGAGCTGGCCAAGAAGCACCAGTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCCAATACCAGGAACAACCAAGATAAAAAACCTAGATGCCAACATTGACTCCTTAAAGGTGAACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCTGGTGGAAGCCAGTATACCTCATTTGCACATTACACCTGGAAGTATGCTGCCCCGCCAAAGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATCTATTCCTTGTGAATGCTAGGGGCGGTTATAATA ] [+] EMBL AU029622 [ TGGANTGGTCTCTCTGGGCTC TGAC TTGAACCCGAAATTTNTGCCCGCTCTGCAGGGAGTTGGGGCATTGG ATTGTTCCCCTACAGCCTTNTCGCCCGCGGGTTTTTCGGAGGGAGAGGAGTGACAGAACAATTGTCTGCTGAATCCTAATTTGCAAGGACATCCCACGATTTTCTGCTGAAAATTTGGAGAAGAATAAACAGCTTTATCTGAAAACGGAAGAGCTGGCCAAGAAGCACCAGTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCCAATACCAGGAACAACCAAGATAAAAAACCTAGATGCCAACATTGACTCCTTAAAGGTGAA CTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCTGGTGGAAGACAGTATACCTCATTTGCACATTACACCTGGAAGTATGCTGACACGCCAAAGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCT CCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCTTGTGAATGCTCTCTGCGGTTCTAATAATGTACTGCCAATAACAAATTACTGCACTTCCACTCGCCTTTGAGAGCTTCACGAAACATATAAAACTTGCTTAAGCACAAAAAAAAAAAAAAAAAA] [+] EMBL AU094788 [ TGNCATTGAACCCGAAA TTGTG CCGCTCTCCAGGGAGTT GGGCATTNGAATTGTT CCCTACAGCCCTATCGCCCGCGGGTTTTTCGGAGGGNGAGGAGTGACAGAACAATTGTCTGCTGAAT CTAATTTGCAAGGACAT CCACGATTTTCTGCTGAAAATTTGGAGANGNATAAACAGCTTTATCTGAAAACGGAAGAGCTGGCCAAGAAGCACCAGTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCCAATACCAGGAACAACCAAGATAAAAAACCTAGATGCCAACATTGACTCCTTAAAGGTGAACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCTGGTGGAAGACAGTATACCTCATTTGCACATTACACCTGGAAGTATGCTGACACGCCAAAGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCTTGTGAATGCTCTCTGCGGTTCTAATAATGTACTGCCAATAACAAATTACTGCACTTCCAaaaaaaa ] [+] EMBL AU075328 [ CACATTACACCTGGAAGTATGCTGNCACGCCAANGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCTTGTGAATGCTCTCTGCGGTTCTAATAATGTACTGCCAATAACANATTACTGCACTTCCACTCGCCTTTGAGAGCTTCACGAAACATATAAAACTTGCTTAAGCACAAACAAAAAAAA ] consensusID : consensus_14621#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 927 fasta sequence [ACACTCTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCCTCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGGTGGCCACCAAGTACGGGATTCGGCGGGGCGCCAACGGTGTGCGCGCCGAGTGCGGTCGGACGGAGACGAGCGCTCCTGCTGCGAGGCCAGCCTCTGTCGTCTTAGTCTTTACTACATTATCCATACTCCCGATTACATAGATTCATGATATATTCTGTTATTGTCCTCTTTCTTTTTGTGTTTTGTTCGTATTCGTTGATCTGACCAACCATATATTGTATTTTTGTCATCGCGCACGACCCGCATTTCGTTGGCATATCACGCCGACGTTTTGCAGCTCTTCACAGTCTTCACGTTCTTTCACAATCTAATGTATTTATTACCTCTCATTTATTGAAATCTACACTTTAACTTTATTTCTTACTATTGCTTGCTCTTTTTTTTATCCTGTATCCATTCATTTACACTTTTCCCTTCTTATATTCATCCCTTCTTTACCGTTCGCTTTTCTTAGTGTGTGCTTTATATTCACCGTGTTTTCTAATTTAATATCATTTATCATTTATATTTATACTCTCCTTTAATTCCCTCATTGTTGCGGCTTAGCTTATATTATATTTTCTCATTTTTTTATTTATTTTGGCTTTATATTTGTTTGTATTTTAATCTGATATGTTATTTATTA] [+] EMBL BE040954 [ACACTCTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGCCGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGTGCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCCTCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGGTGGCCACCAAGTACGGGATTCGGCGGGGCGCCAACGGTGTGCGCGCCGAGTGCGGTCGGACGGAGACGAGCGCTCCTGCTGCGAGGCCAGCCTCTGTCGTCTTAGTCTTTACTACATTATCCATACTCCCGATTACATAGATTCATGATATATTCTGTTATTGTCCTCTTTCTTTTTGTGTTTTGTTCGTATTCGTTGATCTGACCAACCATATATTGTATTTTTGTCATCGCGCACGACCCGCATTTCGTTGGCATATCACGCCGACGTTTTGCAGCTCTTCACAGTCTTCACGTTCTTTCACAATCTAATGTATTTATTACCTCTCATTTATTGAAATCTACACTTTAACTTTATTTCTTACTATTGCTTGCTCTTTTTTTTATCCTGTATCCATTCATTTACACTTTTCCCTTCTTATATTCATCCCTTCTTTACCGTTCGCTTTTCTTAGTGTGTGCTTTATATTCACCGTGTTTTCTAATTTAATATCATTTATCATTTATATTTATACTCTCCTTTAATTCCCTCATTGTTGCGGCTTAGCTTATATTATATTTTCTCATTTTTTTATTTATTTTGGCTTTATATTTGTTTGTATTTTAATCTGATATGTTATTTATTA] consensusID : consensus_14621#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 601 fasta sequence [GAATGGCCCTNTCCAGGATTGGGCATGGATTGGTCCCCTACAGCCCTTTCNCCCCCGGGTTTTTCGAGGAGAGGATTACGAACAATTGTCTGCTGAATCTAATNTGGCAAGGACATCCACGATGTGTCGTGCTGAAAATTTGGAGAAGAATAACCACGCTGTTATCTGAAATACGGGAGAGACTGGCCACAGAAGCAACCCTGTGTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCCCATACCAGGACCACCCAGATTAAAACCTAGATGCCAACACTTGACTCCTTATAAGGTGAACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCNGGTACGCGAAGAAGATGTCGCTGGTGGAAGACAGTATACCTCATTTGCACCTTACACCCTGGAAGTATGCTGACACGCCCCAAGAAGNAAAGCTAAAAAAATATTAGTATATCCAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCCTTGGGAAGTGCGTCGTCTGCGGGTGTCTAATAAGTGGTACGNGCCCATAACCAANTACTGCCAAAA] [+] EMBL BI806266 [GAATGGCCCTNTCCAGGATTGGGCATGGATTGGTCCCCTACAGCCCTTTCNCCCCCGGGTTTTTCGAGGAGAGGATTACGAACAATTGTCTGCTGAATCTAATNTGGCAAGGACATCCACGATGTGTCGTGCTGAAAATTTGGAGAAGAATAACCACGCTGTTATCTGAAATACGGGAGAGACTGGCCACAGAAGCAACCCTGTGTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCCCATACCAGGACCACCCAGATTAAAACCTAGATGCCAACACTTGACTCCTTATAAGGTGAACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCNGGTACGCGAAGAAGATGTCGCTGGTGGAAGACAGTATACCTCATTTGCACCTTACACCCTGGAAGTATGCTGACACGCCCCAAGAAGNAAAGCTAAAAAAATATTAGTATATCCAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCCTTGGGAAGTGCGTCGTCTGCGGGTGTCTAATAAGTGGTACGNGCCCATAACCAANTACTGCCAAAA] consensusID : consensus_14621#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 479 fasta sequence [CTGAGATCCGGTTCGAGCTCGTGCCGAATTCGGCACGAGCGGCACGAGCGGCTTTAGGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCNCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGNCCCCTCGCCAACGANATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCANGTGCANGTGGCCACCAAGTTCGGGATTCGGCGGGGCGCCGACGGCGTGCGCGCCGTGTGCGGCCGGCCGGAGTACGTGCGCGCCTGCTGCGAAGCCACCTCGGCCGCCTCGGCGTCGACTACATCNNCNTCTACTNCCAGCACCGCGTCGACACCACCATCCCCATCGAGGACACGATTGGTGAGCTCAAGAAAATTGGTGGAGGAGGGGAAGGTGAAGTACATTGGGGCTATCGGANGNGAGCCCTGANNCCATCAGGNNAACTCANGCGTGCACC] [+] EMBL AA753238 [CTGAGATCCGGTTCGAGCTCGTGCCGAATTCGGCACGAGCGGCACGAGCGGCTTTAGGCCGCTCGACGACGACGCCGGCGCCGCCGTCATCNCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGNCCCCTCGCCAACGANATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCANGTGCANGTGGCCACCAAGTTCGGGATTCGGCGGGGCGCCGACGGCGTGCGCGCCGTGTGCGGCCGGCCGGAGTACGTGCGCGCCTGCTGCGAAGCCACCTCGGCCGCCTCGGCGTCGACTACATCNNCNTCTACTNCCAGCACCGCGTCGACACCACCATCCCCATCGAGGACACGATTGGTGAGCTCAAGAAAATTGGTGGAGGAGGGGAAGGTGAAGTACATTGGGGCTATCGGANGNGAGCCCTGANNCCATCAGGNNAACTCANGCGTGCACC] consensusID : consensus_14621#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 333 fasta sequence [GAACAACCAAGATAAAAAACCTAGATGCCAACATTGACTCCTTAAAGGTGAACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCTGGTGGAAGACAGTATACCTCATTTGCACATTACACCTGGAAGTATGCTGACACGCCAAAGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCTTGTGAATGCTCTCTGCGGTTCTAATAATGTACTGCCAATAACAAAAAAAAAAAAAAAAAACTCGAGTTTTTT] [+] EMBL CF324954 [GAACAACCAAGATAAAAAACCTAGATGCCAACATTGACTCCTTAAAGGTGAACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCTGGTGGAAGACAGTATACCTCATTTGCACATTACACCTGGAAGTATGCTGACACGCCAAAGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCTGCGTATGTGCTGGATGGTGTTAAATGTATGCCTTGTGAATGCTCTCTGCGGTTCTAATAATGTACTGCCAATAACAAAAAAAAAAAAAAAAAACTCGAGTTTTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 AGAACAAAGGTGGAGACTGCGATTCACTTCCACTCCCTTCCCCACTGCCTTCCTCCTCTC 60 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 ACTCTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGC 120 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 CGATGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAGGTGTCCAAGCTGGGGTTCGGGT 180 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 GCATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCA 240 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 TCGCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCC 300 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 TCGCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGG 360 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 TGGCCACCAAGTTCGGGATTCGGCGGGGCGCCGACGGCGTGCGCGCCGTGTGCGGCCGGC 420 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 CGGAGTACGTGCGCGCCTGCTGCGAGGCCAGCCTCGGCCGCCTCGGCGTCGACTACATCG 480 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 ACCTCTACTACCAGCACCGCGTCGACACCACCATCCCCATCGAGGACACGATTGGTGAGC 540 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 TCAAGAAATTGGTGGAGGAGGGGAAGGTGAGGTACATTGGGCTATCGGAGGCGAGCCCTG 600 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 ACACCATCAGGCGAGCTCATGCCGTGCACCCAATCACTGCAGTTCAGATGGAGTGGTCTC 660 consensus_14621#1 ------------------------------------------------------------ consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 -----------------------------GAATGGCCCTNTCCAGGATTGGGCAT-GGAT 30 consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 TCTGGGCTCGTGACATTGAACCCGAAATTGTGCCGCTCTGCAGGGAGTTGGGCATTGGAA 720 consensus_14621#1 -------------------------------------------------------ACACT 5 consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 TGGTCCCCTACAGCCCTTTCNCCCCCGGGTTTTTCGAGGAGAGGATTACGA----ACAAT 86 consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 TTGTTCCCTACAGCCCTATCGCCCGCGGGTTTTTCGGAGGGAGAGGAGTGACAGAACAAT 780 consensus_14621#1 CTCACTCCCCCTGCGACCGCCGCCGAGAGGCCATGGCGGAGCAAGCTCCACTGGCGCCGA 65 consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 TGTCTGCTGAATCTAATNTGGCAAGGACATCCACGATGTGTCGTGCTGAAAATTTGGAGA 146 consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 TGTCTGCTGAATCTAATTTG-CAAGGACATCCACGATTT--TCTGCTGAAAATTTGGAGA 837 consensus_14621#1 TGCCTCGAGTCAAGCTCGGCACCCGGGGCCTAGAG-GTGTCCAAGCTGGGGTTCGGGTGC 124 consensus_14621#3 ----------------------CTGAGATCCGGTTCGAGCTCGTGCCGAA-TTCG---GC 34 consensus_14621#2 AGAATAACCACGCTGTTATCTGAAATACGGGAGAGACTGGCCACAGAAGCAACCCTG--T 204 consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 AGAATAA--ACAGCTTTATCTGAAA-ACGGAAGAG-CTGGCCA-AGAAGCACCA------ 886 consensus_14621#1 ATGGGGCTCACGGGCGCGTACAACTCGCCGCTCGACGACGACGCCGGCGCCGCCGTCATC 184 consensus_14621#3 ACGAGCGGCACGAGCGGCTTTAG---GCCGCTCGACGACGACGCCGGCGCCGCCGTCATC 91 consensus_14621#2 GTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCC 264 consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 GTGCAGCCCTGCTCAGCTAGCTTTAGCTTGGGTTCTTCATCAAGGGGATGATGTGGTCCC 946 consensus_14621#1 GCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGCCCCCTC 244 consensus_14621#3 NCGCACGCCTTCCGCCGCGGCGTCACCTTCTTCGACACCTCCGACGTCTACGGNCCCCTC 151 consensus_14621#2 CATACCAGGA-CCACCCAGATTAAAA-CCTAGATGCCAACACTTGACTCCTTATAAGGTG 322 consensus_14621#4 -------GAA-CAACCAAGATAAAAAACCTAGATGCCAACA-TTGACTCCTTA-AAGGTG 50 consensus_14621#0 AATACCAGGAACAACCAAGATAAAAAACCTAGATGCCAACA-TTGACTCCTTA-AAGGTG 1004 consensus_14621#1 GCCAACGAGATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCAGGTGCAGGTG 304 consensus_14621#3 GCCAACGANATCCTCCTCGGCAAGGCGCTGAAGCAGCTGCCGCGGGAGCANGTGCANGTG 211 * * ** * * * * * * * * * *** consensus_14621#2 AACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCNGGTACGCGAAGAAGATGTCGCT 382 consensus_14621#4 AACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCT 110 consensus_14621#0 AACCTCACGGATGATGACCTGAAAGAGATCTCTAGCCAGGTACGCGAAGAAGATGTCGCT 1064 consensus_14621#1 GCCACCAAGTACGG-GATTCGGCGGGG--CGCCAACGGTGTGCGCGCCGA--GTGCGGTC 359 consensus_14621#3 GCCACCAAGTTCGG-GATTCGGCGGGG--CGCCGACGGCGTGCGCGCCGT--GTGCGGCC 266 * ** * * ** * * * * * * ** **** * ** * consensus_14621#2 GGTGGAAGACAGTATACCTCATTTGCACCTTACACCCTGGAAGTATGCTGACACGCCCCA 442 consensus_14621#4 GGTGGAAGACAGTATACCTCATTTGCACATTACACC-TGGAAGTATGCTGACACGCCA-A 168 consensus_14621#0 GGTGGAAGACAGTATACCTCATTTGCACATTACACC-TGGAAGTATGCTGACACGCCA-A 1122 consensus_14621#1 GGACGGAG-ACGAGCGCTCCTGCTGCGAGGCCAGCCTCTGTCGTCTTAGTCTTTACTACA 418 consensus_14621#3 GGCCGGAGTACGTGCGCGCCTGCTGCGAAGCCA-CCTCGGCCGCCTCGGCGTCGACTACA 325 ** * ** * * * *** ** * * * * * consensus_14621#2 AGAAGNAAAGCTAAAAAAATATTAGTATATCCAAGATATTGCCTGATTGCTATTCTCCCT 502 consensus_14621#4 AGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCT 228 consensus_14621#0 AGAAGTAAAGCTAAAAAAATATTAGTATATCAAAGATATTGCCTGATTGCTATTCTCCCT 1182 consensus_14621#1 TTATCCA-TACTCCCGATTACATAG---ATTCATGATATATTCTG-TTATTGTCCTCTTT 473 consensus_14621#3 TCNNCNTCTACTNCCAGCACCGCG-----TCGACACCACCATCC--CCATCGAGGACACG 378 ** * * * * * consensus_14621#2 GCGTATGTGCTGGATGGTGTTAAATGTATGCCCTTGGGAAGTGCGTCGTCTGCGGGTGTC 562 consensus_14621#4 GCGTATGTGCTGGATGGTGTTAAATGTATGCC-TTGTGAA---TGCTCTCTGCGGTT--C 282 consensus_14621#0 GCGTATGTGCTGGATGGTGTTAAATGTATGCC-TTGTGAA---TGCTCTCTGCGGTT--C 1236 consensus_14621#1 CTTTTTGTGTTTTGTTCGTATTCGTTGATCTGACCAACCATATATTGTATTTTTGTCATC 533 consensus_14621#3 ATTGGTGAGCTCAAGA-AAATTGGTGGAGGAGGGGAAG-GTGAAGTACATTGGGGCTATC 436 ** * * * * * * * * consensus_14621#2 TAATAAGTGGTACGNGCCCATAACCAANTACTGCCAAAA--------------------- 601 consensus_14621#4 TAATAAT--GTAC-TGCCAATAACAAAAAAAAAAAAAAAAAACTCGAGTTTTTT------ 333 consensus_14621#0 TAATAAT--GTAC-TGCCAATAACAAATTACTGC-ACTTCCACTCGCCTTTGAGAGCTTC 1292 consensus_14621#1 GCGCACGA-CCCGCATTTCGTTGGCATATCACGCCGACGTTTTGCAGCTCTTCACAGTCT 592 consensus_14621#3 GGANGNGAGCCCTGANNCCATCAGGNNAACTCANGCGTGCACC----------------- 479 * consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 ACGAAACATATAAAACTTGCTTAAGCACAAAAAAAAAAAAAAAAAA-------------- 1338 consensus_14621#1 TCACGTTCTTTCACAATCTAATGTATTTATTACCTCTCATTTATTGAAATCTACACTTTA 652 consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 ------------------------------------------------------------ consensus_14621#1 ACTTTATTTCTTACTATTGCTTGCTCTTTTTTTTATCCTGTATCCATTCATTTACACTTT 712 consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 ------------------------------------------------------------ consensus_14621#1 TCCCTTCTTATATTCATCCCTTCTTTACCGTTCGCTTTTCTTAGTGTGTGCTTTATATTC 772 consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 ------------------------------------------------------------ consensus_14621#1 ACCGTGTTTTCTAATTTAATATCATTTATCATTTATATTTATACTCTCCTTTAATTCCCT 832 consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ------------------------------------------------------------ consensus_14621#4 ------------------------------------------------------------ consensus_14621#0 ------------------------------------------------------------ consensus_14621#1 CATTGTTGCGGCTTAGCTTATATTATATTTTCTCATTTTTTTATTTATTTTGGCTTTATA 892 consensus_14621#3 ------------------------------------------------------------ consensus_14621#2 ----------------------------------- consensus_14621#4 ----------------------------------- consensus_14621#0 ----------------------------------- consensus_14621#1 TTTGTTTGTATTTTAATCTGATATGTTATTTATTA 927 consensus_14621#3 ----------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||