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Oryza sativa
cluster # 14638 cluster # 14638       Sequences # 17       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14638#0 length = 1018 sequences # 16  
consensus_14638#1 length = 536 sequences # 1  

consensusID : consensus_14638#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1018
fasta sequence
                              [GACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGATCACCTCCACCTCGCAAACAGAACCAGTACTTTAATTTCACCTTGCAAATTCAGTTGAATTCGGCTCGTTCAGGTTCAGTCGTTTGATCATCATGGCTAGTATGGCCAAGTCGCTCTTGTGCATCTCGCTCGTCGCCATCCTGCTCCTC-GTCGAGACT-ACT-GCTCCACATGGACAAGC-TTACGCCATC-GA-TTGCGGGGCGAAGTGCGGGTA-CCGGT-GC-A-GCAAG-T-CGGGGCGGCCGAAGATGTGCCTGAGGGCAT-C-GGCACCTG-CTGCCAGC-GCTGCGGCTGC-GTGCC-GCC-GGGC-ACCTCC-GGC-A-ACGAGAACGTC-T-GCCCCTGCTACGCC-AACAT-GACCACCCACA-ACGGCCGCCACAAGT-GCCCTTGATCATCTCGA-CCAAT-AT-ATCACCGCTCGATCACCGCGCCGCCGCTTT-GCTATCCAACCGACCGGTGATGATACA-T-GGCGGCAACCTT-GT-GAT-GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT-GCCTGCATGCATGT-AGCTT-GCATAT-GCATGCTAGCTTTGCTATATCGCGT-ATTTGCTAC-TTGGAATAT-GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA-CCGTGTA-CGAG-CAAATAAGTAATA-TAATGAAGTATTTGCTTTTATGATTAAAAAAAAAA]

[+] EMBL AK110640             [GACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGATCACCTCCACCTCGCAAACAGAACCAGTACTTTAATTTCACCTTGCAAATTCAGTTGAATTCGGCTCGTTCAGGTTCAGTCGTTTGATCATCATGGCTAGTATGGCCAAGTCGCTCTTGTGCATCTCGCTCGTCGCCATCCTGCTCCTC GTCGAGACT ACT GCTCCACATGGACAAGC TTACGCCATC GA TTGCGGGGCGAAGTGCGGGTA CCGGT GC A GCAAG T CGGGGCGGCCGAAGATGTGCCTGAGAGCATGC GGCACCTG CTGCCAGT GCTGCGGCTGC GTGCC GCC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCC AACAT GACCACCCACA ACGGCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGTTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG CAAATAAGTAATA TAATGAAGT                          ]
[+] EMBL OSC368               [                                                                                                                                                                                                                                                                                                                                                                          AGAACCAGTACTTTAATTTCACCTTGCAAATTCAGTTGAATTCGGCTCGTTCAGGTTCAGTCGTTTGATCATCATGGCCAGTATGG CAAGTCGCTCTTGTGCATNTNGCTCGTCGCCATCCTGCTCCTC GTCGAGACT ACT GCTCCACATGGACAAGC TTACGCCATC GA TTGCGGGGCGAAGTGCGGGTA CCGGT GC A GCAAG T CGGGGCGGCCGAAGATGTGCCTGANAGCATGC GGCACCTG CTGCCAGC GCTGCGGCTGC NTGCC GCC GGGCAANCTCC GGC A AC                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BI801824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TCGTCCCCATCCTGCTCCTCGGTCGAGACTGACTGGCTCCACATGGACAAGCTTTACGCCATC GA TTTTCGGGCGAAGT CGGGTA CCGGT CC A CCAAG T C GGGC GCCGAAGATGTGCCTGAGGGCAT C GGCACCTG CTGCCAGC GCTTCGGCTGC GTGCC GCC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCC  ACAG GACCACCCACATACGGCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG CAAATAAGTAATA TAATGAAGTATTTGCTTTTATGATTAAAAA     ]
[+] EMBL BI804246             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCCTC GTCGAGACT ACT GCTCCACATGGACAAGC TTACGCCATC GA TTGCGGGGCGAAGTGCGGGTA CCGGT GCGA GCAAG T CGGGGCGGCCGAAGATGTGCCTGAGGGCATGC GGCACCTG CTGCCAGC GCTGCGGCTGC GTGCC GCC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCC AACAT GACCACCCACA ACGGCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG C AATAAGTAATA TAATGAAGTATTTGCTTTTATGATTAAAAAA    ]
[+] EMBL BI800758             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGACT GCT GCTCCACATGGACAAGC TTACCCCATC GA TT C GGGCGAAGTGC GGTA CCGGT GC A  CAA  T C GGGCGGCCGAAGATGTGCCTGAGGGCAT C GGCACCTG CTGCCAGC GCTGCGGCTGCTGTGCC GCC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCC  ACAT GACCACCCACA ACGGCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG C AATAAGTAATA TAATGAAGTATTTGCTTTTATGATTTAAAAAAAA ]
[+] EMBL BI801014             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CACATGGACAAGC TTACCCCATC GA TTGC GGGCGAAGTGC GGTA CCGGT GC A GCAA  T C GGGC GCCGAAGATGTGCCTGAGGGCAT C GGCACCTG CTGCCAGCAGCTGC GCTGC GT CC CCA GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCCAAACAT GACCACCCACA AC GCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG C AATAAGTAATA TAATGAAGTATTTGCTTTTATGATTTAAAAAAAAA]
[+] EMBL BI801949             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACATGGACTAGC TTACGCCATC GATTTCCGGGGCGAAGTGCGGGTA CCCGTGGC A GCAA  T C GGGC GCCGAAGATGTGCCTGA GGCAT C GGCACCT  CTGCCAGC TCTGC GCTGC GT CC  CC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCC AACAT GACCACCCACA ACGGCCGCCACAAGT GCCCTTGATCATCTCGA CCAATGATGATCACCGCTCGATCACCGCGCCGCCGCTTTGGCTATCCAACCGACCGGTGATGATACA TGGGCGGCAACCTTGGT GATGGATCCTAGCTAGCTAGATGTGCTACCTACTTCGTGGCCTGCATGCATGTGAGCTTGGCATATGGCATGCTAGCTTTGCTATATCGCGTGATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTACCGA  C AATAAGTCATACTAATGAAGTATTTGCTTTTATGATTAAAAAAAA  ]
[+] EMBL BI796355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAAGC TTAC CCATCTGA TTTC GGGCGAAGTGCGGGTACCCGGT GC A  CAAT TGCGGGGCGCCCGAAGATGTGCCTGAGGGCAT C GGCACCTG CTGCCAGC GCT CGGCTGC GTGCC GCC GGGC ACCTCC GGC A ACGAGAACGTCTT GCCCCTG TACGCC AACAT GACCACCCACA ACGGCCGCCACAAGT GCCCTTGATCATTTCGACCCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCCACCGACCGGTGATGATACACT GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGACCCGTGTA CGAG CCAATAAGTAATA TAAT                               ]
[+] EMBL BI800381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GC TTAC CCATC GA TTGC GGGCGAAGT C GGTA CCGGT GC A GCAA  T C GGGCGCCCGAAGATGTGCCTGAGGGCAT C GGCACCTGTCTGCCAGC GCTGCGGCTGC GTGCC GCC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCC  ACAT GACCACCCACATAC GCCGCCACAAGT GCCCTTGATCATCTCGA CC AT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG CCAATAAGTAATA TAATGAAGTATTTGCTTTTATGA  AAAAAAAAA ]
[+] EMBL BI803020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           C TTACCCCATC GA TTCCGGGCCGAAGTCCGGGTA CCGTT CC A  CAAGTT CGGGCCGCCCGAAGATGT CCTGAGGCCATCC GCCACCTG CT CCAGC GCTGCGGCTGC GT CC GCC  GGC ACCTCC GGCAA ACGAGAACGTC T GCCCCTGCTACGCC AACAT GACCACCCACA ACGGCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCC CCGCTTT GCTATCCAACCGACCGGTGATGATACA T  GCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT CCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGT TCGTGATCGATCGATCGATCGA CCGTGTA CGAC CAAATAAGTCATA TAATGAAGTA TTGCTTTTATGATTAAAAAA    ]
[+] EMBL BI803987             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTAC CCTTC GA TT CGGGCCGAA TTCCGGTA CCGGT CC ACCCAAT T CGGGCCGCCCGAAGATGTGCCTGAGGGCAT C GGCACCTG CTGCCAGC GCTGCGGCTGC GTGCC CCC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTG TACGCC AACAT GACCACCCACA ACGGCCGCCACAAGT GCCCTTGATCATCTCGACCCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCCACCGACCGGTGATGATACC T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCAAATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG CCAATAAGTAATA TAATGAAGTATTTGCTTTTATGATTAAAAAAAAAA]
[+] EMBL BI804408             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGTCCGGTTA CCGGT CC A CCAAG T CGGGCCGCCCGAAGATGTCCCTGAGGCCAT C GGCACCTG CTGCCAGC GCTGCGGCTGC GTCCC CCC GGGC ACCTCC GGCAA ACGAGAACGTC TGGCCCCTGCTACGCC AACATGGACCACCCACA AC GCCGCCACAAGTGGCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCC CCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGC GCAACCTT GTGGAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTCCATATATATGTGGCGTTTCGTGATCGATCGATCGATCGA CCGTGTA CGAC CAAATAAGTAATA TAATGAAGTATTTGCTTTTATGATTAAAAAAA   ]
[+] EMBL BI801294             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TA CCGGT GC A GCAAG T C GGGCGGCCGAAGATGTGCCTGAGGGCATGC GGCACCTG CTGCCAGC GCTGCGGCTGC GTGCC  CC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCC  ACAT GACCACCCACA ACGGCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG CAAATAAGTAATA TAATGAAGTATTTGCTTTTATGATTTAAAAA    ]
[+] EMBL BI802038             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGGT GC A GCAAG T C GGGCGGCCGAAGATGTGCCTGAGGGCATGCAGGCACCTG CTGCCAGC GCTGCGGCTGC GTTCCAGCCAGGGC ACCTCCAGGC AGACGAGAACGTC T GCCCCTGCTACGCC AACAT GACCACCCACAGACGGCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGA  C AATAAGTAATA TAATGAAGTATTTGCTTTTATGATTAAAA      ]
[+] EMBL BI802433             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CGCCCGAAGATGTGCCTGAGGGCATGC GGCACCTG CTGCCAGC GCTGCGGCTGC GTGCC GCC GGGC ACCTCC GGC A ACGAGAACGTC T GCCCCTGCTACGCC AACAT GACCACCCACA AC GCCGCCACAAGT GCCCTTGATCATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTACTTTGGAATATGGTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAG C AATAAGTAATA TAATGAAGTATTTGCTTTTATGATTAAAAA     ]
[+] EMBL BI801771             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CATCTCGA CCAAT AT ATCACCGCTCGATCACCGCGCCGCCGCTTT GCTATCCAACCGACCGGTGATGATACA T GGCGGCAACCTT GT GAT GATCCTAGCTAGCTAGATGTGCTACCTACTTCGT GCCTGCATGCATGT AGCTT GCATAT GCATGCTAGCTTTGCTATATCGCGT ATTTGCTAC TTGGAATAT GTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTA CGAGCCAAATAAGTAATA TAATGAAGTATTTGCTTTTATGATTAAAAAAAAAA]


>consensus_14638#0 GACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATG GTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCT ACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGT GACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAA ATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAG CTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGATCACCTCCACCTCGCAA ACAGAACCAGTACTTTAATTTCACCTTGCAAATTCAGTTGAATTCGGCTCGTTCAGGTTC AGTCGTTTGATCATCATGGCTAGTATGGCCAAGTCGCTCTTGTGCATCTCGCTCGTCGCC ATCCTGCTCCTCGTCGAGACTACTGCTCCACATGGACAAGCTTACGCCATCGATTGCGGG GCGAAGTGCGGGTACCGGTGCAGCAAGTCGGGGCGGCCGAAGATGTGCCTGAGGGCATCG GCACCTGCTGCCAGCGCTGCGGCTGCGTGCCGCCGGGCACCTCCGGCAACGAGAACGTCT GCCCCTGCTACGCCAACATGACCACCCACAACGGCCGCCACAAGTGCCCTTGATCATCTC GACCAATATATCACCGCTCGATCACCGCGCCGCCGCTTTGCTATCCAACCGACCGGTGAT GATACATGGCGGCAACCTTGTGATGATCCTAGCTAGCTAGATGTGCTACCTACTTCGTGC CTGCATGCATGTAGCTTGCATATGCATGCTAGCTTTGCTATATCGCGTATTTGCTACTTG GAATATGTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGAC CGTGTACGAGCAAATAAGTAATATAATGAAGTATTTGCTTTTATGATTAAAAAAAAAA



consensusID : consensus_14638#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 536
fasta sequence
                              [AATCTTACATTCTGTCCCATCTGCTCCTTGGGAGATTGCTCCACATGGACAAGCTTACGCCATCGATTCGGGCGAAGTGCGGGTACCGTCCACCAATTCGGGCCGCCGAAGATGTGCCTGAGGCATCGGCACCTCTGCCAGCGCTGCGCTGCGTCCGCCGGCCACCTCCGCCAACGAGAACGTCTGCCCCTGCTACGCCAACATGACCACCCACAACGCCGCCACAAGTGCCCTTGATCATCTCGACCAATATATCACCGCTCGATCACCGCGCCGCCGCTTTGCTATCCAACCGACCGGTGATGATACATGCGCAACCTTGTGATGATCCTAGCTAGCTAGATGTGCTACCTACTTCGTCCTGCATGCATGTAGCTTGCATATGCATGCTAGCTTTGCTATATCGCGTATTTGCTACTTGGAATATGTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGACCGTGTACCGACCAATAAGTCATATAATTGAAGTATTTTGCTTTTTAAAAAAAAAA]

[+] EMBL BI803153             [AATCTTACATTCTGTCCCATCTGCTCCTTGGGAGATTGCTCCACATGGACAAGCTTACGCCATCGATTCGGGCGAAGTGCGGGTACCGTCCACCAATTCGGGCCGCCGAAGATGTGCCTGAGGCATCGGCACCTCTGCCAGCGCTGCGCTGCGTCCGCCGGCCACCTCCGCCAACGAGAACGTCTGCCCCTGCTACGCCAACATGACCACCCACAACGCCGCCACAAGTGCCCTTGATCATCTCGACCAATATATCACCGCTCGATCACCGCGCCGCCGCTTTGCTATCCAACCGACCGGTGATGATACATGCGCAACCTTGTGATGATCCTAGCTAGCTAGATGTGCTACCTACTTCGTCCTGCATGCATGTAGCTTGCATATGCATGCTAGCTTTGCTATATCGCGTATTTGCTACTTGGAATATGTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGACCGTGTACCGACCAATAAGTCATATAATTGAAGTATTTTGCTTTTTAAAAAAAAAA]


>consensus_14638#1 AATCTTACATTCTGTCCCATCTGCTCCTTGGGAGATTGCTCCACATGGACAAGCTTACGC CATCGATTCGGGCGAAGTGCGGGTACCGTCCACCAATTCGGGCCGCCGAAGATGTGCCTG AGGCATCGGCACCTCTGCCAGCGCTGCGCTGCGTCCGCCGGCCACCTCCGCCAACGAGAA CGTCTGCCCCTGCTACGCCAACATGACCACCCACAACGCCGCCACAAGTGCCCTTGATCA TCTCGACCAATATATCACCGCTCGATCACCGCGCCGCCGCTTTGCTATCCAACCGACCGG TGATGATACATGCGCAACCTTGTGATGATCCTAGCTAGCTAGATGTGCTACCTACTTCGT CCTGCATGCATGTAGCTTGCATATGCATGCTAGCTTTGCTATATCGCGTATTTGCTACTT GGAATATGTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGA CCGTGTACCGACCAATAAGTCATATAATTGAAGTATTTTGCTTTTTAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14638#0      GACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGGGGCCTACCATG 60
consensus_14638#1      ------------------------------------------------------------
                                                                                   

consensus_14638#0      GTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCT 120
consensus_14638#1      ------------------------------------------------------------
                                                                                   

consensus_14638#0      ACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGT 180
consensus_14638#1      ------------------------------------------------------------
                                                                                   

consensus_14638#0      GACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAATTGGAATGAGTACAATCTAA 240
consensus_14638#1      ------------------------------------------------------------
                                                                                   

consensus_14638#0      ATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAG 300
consensus_14638#1      ------------------------------------------------------------
                                                                                   

consensus_14638#0      CTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGATCACCTCCACCTCGCAA 360
consensus_14638#1      ------------------------------------------------------------
                                                                                   

consensus_14638#0      ACAGAACCAGTACTTTAATTTCACCTTGCAAATTCAGTTGAATTCGGCTCGTTCAGGTTC 420
consensus_14638#1      ------------------------------------------------------------
                                                                                   

consensus_14638#0      AGTCGTTTGATCATCATGGCTAGTATGGCCAAGTCGCTCTTGTGCATCTCGCTCGTCGCC 480
consensus_14638#1      --------------------------------------------AATCTTACATTCTGTC 16
                                                                    ****  *     * *

consensus_14638#0      ATCCTGCTCCTCGTCGAGACTACTGCTCCACATGGACAAGCTTACGCCATCGATTGCGGG 540
consensus_14638#1      --CCATCTGCTCCTTGGGAG-ATTGCTCCACATGGACAAGCTTACGCCATCGATTC--GG 71
                         **  ** *** * * **  * ********************************   **

consensus_14638#0      GCGAAGTGCGGGTACCGGTGCAGCAAGTCGGGGCGGCCGAAGATGTGCCTGAGGGCATCG 600
consensus_14638#1      GCGAAGTGCGGGTACCG-TCCACCAATTCGGGCCG-CCGAAGATGTGCCTGAGG-CATCG 128
                       ***************** * ** *** ***** ** ****************** *****

consensus_14638#0      GCACCTGCTGCCAGCGCTGCGGCTGCGTGCCGCCGGGCACCTCCGGCAACGAGAACGTCT 660
consensus_14638#1      GCACCT-CTGCCAGCGCTGCG-CTGCGT-CCGCCGGCCACCTCCGCCAACGAGAACGTCT 185
                       ****** ************** ****** ******* ******** **************

consensus_14638#0      GCCCCTGCTACGCCAACATGACCACCCACAACGGCCGCCACAAGTGCCCTTGATCATCTC 720
consensus_14638#1      GCCCCTGCTACGCCAACATGACCACCCACAACG-CCGCCACAAGTGCCCTTGATCATCTC 244
                       ********************************* **************************

consensus_14638#0      GACCAATATATCACCGCTCGATCACCGCGCCGCCGCTTTGCTATCCAACCGACCGGTGAT 780
consensus_14638#1      GACCAATATATCACCGCTCGATCACCGCGCCGCCGCTTTGCTATCCAACCGACCGGTGAT 304
                       ************************************************************

consensus_14638#0      GATACATGGCGGCAACCTTGTGATGATCCTAGCTAGCTAGATGTGCTACCTACTTCGTGC 840
consensus_14638#1      GATACATG--CGCAACCTTGTGATGATCCTAGCTAGCTAGATGTGCTACCTACTTCGT-C 361
                       ********   *********************************************** *

consensus_14638#0      CTGCATGCATGTAGCTTGCATATGCATGCTAGCTTTGCTATATCGCGTATTTGCTACTTG 900
consensus_14638#1      CTGCATGCATGTAGCTTGCATATGCATGCTAGCTTTGCTATATCGCGTATTTGCTACTTG 421
                       ************************************************************

consensus_14638#0      GAATATGTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGAC 960
consensus_14638#1      GAATATGTATGATGTGTGTGCATATATATGTGGCGTGTCGTGATCGATCGATCGATCGAC 481
                       ************************************************************

consensus_14638#0      CGTGTACGAGCAAATAAGTAATATAAT-GAAGTATTTGCTTTTATGATTAAAAAAAAAA 1018
consensus_14638#1      CGTGTACCGACCAATAAGTCATATAATTGAAGTATTTTGCTTT----TTAAAAAAAAAA 536
                       *******   * ******* ******* *********   ***    ************




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)