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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14667#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1845 fasta sequence
[AAGAGA-GACTTTGGGGGAGGAAGAGAGAGCTTCTGTAGGTGTGATATTCTCTTTTGATCTTATCTGATCGCCGGTATTGAGCAAGGATTGGGGTTTGGGGTAAGGATAGCGAACACAAATGGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGGAGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTCAGTTGCTCTTGCTGTGGTTTTTGTTGTCATCACTGCTGGAATTGCGATTGTCAGACTCATTGAAGGAACTGTGGAGATTCCCAAACTCTTTCCCGAGTTAGATGGAACTAATTCCATCTGGGAACTCTTTACAGCTGTGCCTGTTGTTGTCACTGCCTACATTTGCCACTACAATGTACATAGCATCGACAATGAGTTGGAAGATAGAACTCAAACCAAGCCAATTGTGCAAACTTCACTGGCTCTCTGCTCAAGTGTGTACATTGCGACAAGCTTCTTTGCATATCTCCTCTTTGGCGAGGGTACCCTGGCTGATGTACTCGCCAACTTTGACTCCAACCTTCATATTCCATTCAGCTCTGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCATAGTCTTCTTCGCCCTTAGGCTCAATTTGGATGGACTGCTCTTCCCTACTGCAAGGCACATTTCTCGTGACAACAGAAGGTTCGCCATTATCACGGGATCACTCCTTGCTGTAATTTATCTTGCTGCCATCTTCATACCGAGCATCTGGGACGCGTTCCAATTCACCGGTGCCACAGCTGCTGTTCTTATCGGTTTTATCTTTCCTGCCATGATCATACTCAGAGATCCTTATGGAATTGCAACCAAGCGCGACAAGATTTTGGCCTTAACCATGATTGTGCTTGCGGTGCTCTCAAATTCTGTGGCTCTATACAGCGATGCACTGAACATCATCTTTCACAGGAAAGTGGAGGCCTAAAACTCCATACTTCGAGCGACAAAGTGGAATGTACAGTTAGAATGATTTGGTGAGTTTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCATTGATTTTTATTCTGGACACCTGAAAGGATTTGATTTGCTGCATTTGTCTAGTTTCCTGAACATAAGCTGGTTCAACATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTGCGGTTGTTTGTATCTATTCCGCCA-AAAAGAATTTTTCTTTTTGTTCTATACATGTTTATTCAATCATCCTGAAAATTTTAAGTGGATGACTTGAAAA-GGTTGTTTATATATACAATAATGCACATTGAAAC]
[+] EMBL CB647288 [AAGAGAGGACTTTGGGGGAGGAAGAGAGAGCTTCTGTAGGTGTGATATTCTCTTTTGATCTTATCTGATCGCCGGTATTGAGCAAGGATTGGGGTTTGG GGATAGCGAACACAAATGGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGGAGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGATGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCTTTAAGCGTTT ]
[+] EMBL CB640913 [ GAGA GAGTTTGGGGGAGGAAGAGAGAGCTTCTGTAGGTGTGATATTCTCTTTTGATCTTATCTGATCGCCGGTATTGAGCAAGGATTGGGGTTTGGGGTAAGGATAGCGAACACAAATGGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGGAGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCAGTCAGTGGGGGAGGATC ]
[+] EMBL AK069748 [ TGTAGGTGTGATATTCTCTTTTGATCTTATCTGATCGCCGGTATTGAGCAAGGATTGGGGTTTGGGGTAAGGATAGCGAACACAAATGGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGGAGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTCAGTTGCTCTTGCTGTGGTTTTTGTTGTCATCACTGCTGGAATTGCGATTGTCAGACTCATTGAAGGAACTGTGGAGATTCCCAAACTCTTTCCCGAGTTAGATGGAACTAATTCCATCTGGGAACTCTTTACAGCTGTGCCTGTTGTTGTCACTGCCTACATTTGCCACTACAATGTACATAGCATCGACAATGAGTTGGAAGATAGAACTCAAACCAAGCCAATTGTGCAAACTTCACTGGCTCTCTGCTCAAGTGTGTACATTGCGACAAGCTTCTTTGCATATCTCCTCTTTGGCGAGGGTACCCTGGCTGATGTACTCGCCAACTTTGACTCCAACCTTCATATTCCATTCAGCTCTGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCATAGTCTTCTTCGCCCTTAGGCTCAATTTGGATGGACTGCTCTTCCCTACTGCAAGGCACATTTCTCGTGACAACAGAAGGTTCGCCATTATCACGGGATCACTCCTTGCTGTAATTTATCTTGCTGCCATCTTCATACCGAGCATCTGGGACGCGTTCCAATTCACCGGTGCCACAGCTGCTGTTCTTATCGGTTTTATCTTTCCTGCCATGATCATACTCAGAGATCCTTATGGAATTGCAACCAAGCGCGACAAGATTTTGGCCTTAACCATGATTGTGCTTGCGGTGCTCTCAAATTCTGTGGCTCTATACAGCGATGCACTGAACATCATCTTTCACAGGAAAGTGGAGGCCTAAAACTCCATACTTCGAGCGACAAAGTGGAATGTACAGTTAGAATGATTTGGTGAGTTTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCATTGATTTTTATTCTGGACACCTGAAAGGATTTGATTTGCTGCATTTGTCTAGTTTCCTGAACATAAGCTGGTTCAACATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTGCGGTTGTTTGTATCTATTCCGCCA AAAAGAATTTTT ]
[+] EMBL CB672506 [ TCTTTTGATCTTATCTGATCGCCGGTATTGAGCAAGGATTGGGGTTTGGGGTAAGGATAGCGAACACAAATGGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGGAGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTCAGTTGCTCTTGCTGTGGTTTTTGTTGTCATCACTGCTGGAATTGCGATTGTCACACTCATTGAAGGAACTGTGGAGATTCCCAAACTCT ]
[+] EMBL CB676833 [ TCTTCTCTTCTTATCTGATCGCCGGTATTGAGCAAGGATTGGGGTTTGG GGATAGCGAACACAAATGGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGGAGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTCAGTTGCTCTTGCTGTGGTTATTGTTGTCATCACTGCTGGAATTGCGATTGTCACACTCATTG ]
[+] EMBL CB677267 [ GATCCTATCTGATCGCCGGTATTGAGCAAGGATTGGGGTTTGGGGTAAGGATAGCGAACACAAATGGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGGAGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGAGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTCAGTTGCTCTTGCTGTGGTTTTTGTTGTCATCACTGCTGGAATTGCGATTGTCAGACTCATTGAACGAACTGTGGAGATTCCCAAACTCTTTCCCGAGTTAGATGGAACTAATTCCAT ]
[+] EMBL CB652262 [ GATCGCCGGTATTGAGCAAGGATTGGGGTTTGGGGTAAGGATAGCGAACACAAATGGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACTAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGGAGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGACGCATCCATTGACATGCTGGTCAGGTGCATCCACAAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGATGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCTAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCAGATGGTCTCCTTGCTACGACTCTTTATGAGTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGACATACGCATCTGCACTGTCAGTTGCTCTTGCTGTGGATTTTGATGa ]
[+] EMBL CB653433 [ TGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTCAGTTGCTCTTGCTGTGGTTTTTGTTGTCATCACTGCTGGAATTGCGATTGTCAGACTCATTGAAGGAACTGTGGAGATTCCCAAACTCTTTCCCGAGTTAGATGGAACTAATTCCATCTGGGAACTCTTTACAGCTGTGCCTGTTGTTGTCACTGCCTACATTTGCCACTACAATGTACATAGCATCGACAATGAGTTGGAAGATAGAACTCAAACCAAGCCAATTGTGCAAACTTCACTGGCTCTCTGCTCAAGTGTGTACATTGCGACAAGCTTCTTTGCATATCTCCTCTTTGGCGAGGGTACCCTGGCTGATGTACTCGCCAACTTTGACTCCAACCTTCATATTCCATTCAGCTCTGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCATAGTCTTCTTCGCCCTTANGCTCAATTTGG ]
[+] EMBL CB664576 [ GTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTCAGTTGCTCTTGCTGTGGTTTTTGTTGTCATCACTGCTGGAATTGCGATTGTCAGACTCATTGAAGGAACTGTGGAGATTCCCAAACTCTTTCCCGAGTTAGATGGAACTAATTCCATCTGGGAACTCTTTACAGCTGTGCCTGTTGTTGTCACTGCCTACATTTGCCACTACAATGTACATAGCATCGACAATGAGTTGGAAGATAGAACTCAAACCAAGCCAATTGTGCAAACTTCACTGGCTCTCTGCTCAAGTGTGTACATTGCGACAAGCTTCTTTGCATATCTCCTCTTTGGCGAGGGTACCCTGGCTGATGTACTCGCCAACTTTGACTCCAACCTTCATATTCCATTCAGCTCTGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCATAGTCTTCTTCGCCCTTANGCTCAATTTGGATGGACTGCTC ]
[+] EMBL CB664611 [ GTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTCAGTTGCTCTTGCTGTGGTTTTTGTTGTCATCACTGCTGGAATTGCGATTGTCAGACTCATTGAAGGAACTGTGGAGATTCCCAAACTCTTTCCCGAGTTAGATGGAACTAATTCCATCTGGGAACTCTTTACAGCTGTGCCTGTTGTTGTCACTGCCTACATTTGCCACTACAATGTACATAGCATCGACAATGAGTTGGAAGATAGAACTCAAACCAAGCCAATTGTGCAAACTTCACTGGCTCTCTGCTCAAGTGTGTACATTGCGACAAGCTTCTTTGCATATCTCCTCTTTGGCGAGGGTACCCTGGCTGATGTACTCGCCAACTTTGACTCCAACCTTCATATTCCATTCAGCTCTGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTT ]
[-] EMBL CB653434 [ GCATCGACAATGAGTGGGAAGATAGAACTCAAACCAAGCCAATTGTGCAAACTTCACTGGCTCTCTGCTCAAGTGTGTACATTGCGACAAGCTTCTTTGCATATCTCCTCTTTGGCGAGGGTACCCTGGCTGATGTACTCGCCAACTTTGACTCCAACCTTCATATTCCATTCAGCTCTGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCATAGTCTTCTTCGCCCTTAGGCTCAATTTGGATGGACTGCTCTTCCCTACTGCAAGGCACATTTCTCGTGACAACAGAAGGTTCGCCATTATCACGGGATCACTCCTTGCTGTAATTTATCTTGCTGCCATCTTCATACCGAGCATCTGGGACGCGTTCCAATTCACCGGTGCCACAGCTGCTGTTCTTATCGGTTTTATCTTTCCTGCCATGATCATACTCAGAGATCCTTATGGAATTGCAACCAAGCGCGACAAGATTTTGGCCTTAACCATGATTGTGCTTGCGGTGCTCTCAAATTCTGTGGCTCTATACAGCGATGCACTGAACATCATCTTTCACAGGAAAGTGGAGGCCTAAAACTCCATACTTCGAGCGACAAAGTGGAATGTACAGTTAGAATGATTTGGTGAGTTTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCATTGATTTTTATTCTGGACACCTGAAAGGATTTGATTTGCTGCATTTGTCTAGTTTCCTGAACATAAGCTGGTTCAACATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTGCGGTTGTTg ]
[-] EMBL CB647289 [ AGCTCTGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCATAGTCTTCTTCGCCCTTAGGCTCAATTTGGATGGACTGCTCTTCCCTACTGCAAGGCACATTTCTCGTGACAACAGAAGGTTCGCCATTATCACGGGATCACTCCTTGCTGTAATTTATCTTGCTGCCATCTTCATACCGAGCATCTGGGACGCGTTCCAATTCACCGGTGCCACAGCTGCTGTTCTTATCGGTTTTATCTTTCCTGCCATGATCATACTCAGAGATCCTTATGGAATTGCAACCAAGCGCGACAAGATTTTGGCCTTAACCATGATTGTGCTTGCGGTGCTCTCAAATTCTGTGGCTCTATACAGCGATGCACTGAACATCATCTTTCACAGGAAAGTGGAGGCCTAAAACTCCATACTTCGAGCGACAAAGTGGAATGTACAGTTAGAATGATTTGGTGAGTTTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCATTGATTTTTATTCTGGACACCTGAAAGGATTTGATTTGCTGCATTTGTCTAGTTTCCTGAACATAAGCTGGTTCAACATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTGCGGTTGTTTGTATCTATTCCGCCA AAAAGAATTTTTCTTTTTGTTCTATACATGTTTATTCAATCATCCTGAAAATTTTAAGTGGATGACTTGAAAA GGTTGTTTATATATACAATAATGCACATTGAAAC]
[-] EMBL CB664577 [ AGCTCTGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCATAGTCTTCTTCGCCCTTAGGCTCAATTTGGATGGACTGCTCTTCCCTACTGCAAGGCACATTTCTCGTGACAACAGAAGGTTCGCCATTATCACGGGATCACTCCTTGCTGTAATTTATCTTGCTGCCATCTTCATACCGAGCATCTGGGACGCGTTCCAATTCACCGGTGCCACAGCTGCTGTTCTTATCGGTTTTATCTTTCCTGCCATGATCATACTCAGAGATCCTTATGGAATTGCAACCAAGCGCGACAAGATTTTGGCCTTAACCATGATTGTGCTTGCGGTGCTCTCAAATTCTGTGGCTCTATACAGCGATGCACTGAACATCATCTTTCACAGGAAAGTGGAGGCCTAAAACTCCATACTTCGAGCGACAAAGTGGAATGTACAGTTAGAATGATTTGGTGAGTTTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCATTGATTTTTATTCTGGACACCTGAAAGGATTTGATTTGCTGCATTTGTCTAGTTTCCTGAACATAAGCTGGTTCAACATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTGCGGTTGTTTGTATCTATTCCGCCA AAAAGAATTTTTCTTTTTGTTCTATACATGTTTATTCAATCATCCTGAAAATTTTAAGTGGATGACTTGAAAATGGTGGGTTATATATACAATAATGCAC ]
[-] EMBL CB664612 [ GTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCATAGTCTTCTTCGCCCTTAGGCTCAATTTGGATGGACTGCTCTTCCCTACTGCAAGGCACATTTCTCGTGACAACAGAAGGTTCGCCATTATCACGGGATCACTCCTTGCTGTAATTTATCTTGCTGCCATCTTCATACCGAGCATTTGGGACGCGTTCCAATTCACCGGTGCCACAGCTGCTGTTCTTATCGGTTTTATCTTTCCTGCCATGATCATACTCAGAGATCCTTATGGAATTGCAACCAAGCGCGACAAGATTTTGGCCTTAACCATGATTGTGCTTGCGGTGCTCTCAAATTCTGTGGCTCTATACAGCGATGCACTGAACATCATCTTTCCCAGGAAAGTGGAGGCCTAAAACTCCATACTTCGAGCGACAAAGTGGAATGTACAGTTAGAATGATTTGGTGAGTTTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCATTGATTTTTATTCTGGACACCTGAAAGGATTTGATTTGCTGCATTTGTCTAGTTTCCTGAACATAAGGTGGTTCACCATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTGCGGTTGTTTGTATCTATTCCGCCA AAAAGAATTTTTCTTTTTGTTGTATACATGTTTATTCAATCATCCTGAAAATTTTAAGTGGATGACTTGAAAACGGTTGTTTATATATACAATAATGCcc ]
[-] EMBL CB663917 [ GGACTGCTCTTCCCTACTGCAAGGCACATTTCTCGTGACAACAGAAGGTTCGCCATTATCACGGGATCACTCCTTGCTGTAATTTATGTTGCTGCCATCTTCATACCGAGCATCTGGGACGCGTTCCAATTCACCGGTGCCACAGCTGCTGTTCTTATCGGTTTTATCTTTCCTGCCATGATCATACTCAGAGATCCTTATGGAATTGCAACCAAGCGCGACAAGATTTTGGCCTTAACCATGATTGTGCTTGCGGTGCTCTCAAATTCTGTGGCTCTATACAGCGATGCACTGAACATCATCTTTCACAGGAAAGTGGAGGCCTAAAACTCCATACTTCGAGCGACAAAGTGGAATGTACAGTTAGAATGATTTGGTGAGTTTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCATTGATTTTTATTATGGACACCTGAAAGGATTTGATTTGCTGCATTTGTCTAGTTTCCTGAACATAAGCTGGTTCAACATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTGCGGTTGTTTGTATTTATTCCGCCATGAAAGAATTTTTCT ]
consensusID : consensus_14667#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 675 fasta sequence
[ATGGATCACCAAGTGCCAGCAGGCATGTGTCACCCAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATTCATGAGTTCAATGGAGCTTCTTTNTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCATTAAGCGTTTGGGTAGGTGAATTCCACATTGTAATATGAGGTTCACTGTGCTAACTACTGTTTACGGTTAACTCATACTAATAAAACATCTTTGGTTTATAGATTCATTGAGATACATAAAAAAAA]
[-] EMBL CA763668 [ATGGATCACCAAGTGCCAGCAGGCATGTGTCACCCAAGGAAATACGAGATGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATTCATGAGTTCAATGGAGCTTCTTTNTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTATGGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCTGCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCCATTGGTGAGCATTAAGCGTTTGGGTAGGTGAATTCCACATTGTAATATGAGGTTCACTGTGCTAACTACTGTTTACGGTTAACTCATACTAATAAAACATCTTTGGTTTATAGATTCATTGAGATACATAAAAAAAA]
consensusID : consensus_14667#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 408 fasta sequence
[GGGAGTCAATATCTTCAGAGAGCCTTATTGGAAATGCATACCAAGCGCGACAAGAGTGTTGTGGCCTTTAACCATGATGTGGTGCTTTGCGGTGCTTCTCAAATTTCTGTGGCTCTATACAGCGATGCAACTGAACATCAGTCTTTCACAGGAAAGTGGAGGCCTAAAACTCCCATACTTCGAGCGACAAAGTGGAATGTACACGTTAGAAGTGATTTGGGTGAGTTGTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCACTTGATTTGTTATTCTGGACACCTGAAAGGATTTGATTGCTGCATTTGTCTAGTTTCCTGAACATAAGCTGGTTCAACATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTCCGGTTGTTTGTATCTATTC]
[+] EMBL BI810157 [GGGAGTCAATATCTTCAGAGAGCCTTATTGGAAATGCATACCAAGCGCGACAAGAGTGTTGTGGCCTTTAACCATGATGTGGTGCTTTGCGGTGCTTCTCAAATTTCTGTGGCTCTATACAGCGATGCAACTGAACATCAGTCTTTCACAGGAAAGTGGAGGCCTAAAACTCCCATACTTCGAGCGACAAAGTGGAATGTACACGTTAGAAGTGATTTGGGTGAGTTGTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCGGTGGTAGCCACTTGATTTGTTATTCTGGACACCTGAAAGGATTTGATTGCTGCATTTGTCTAGTTTCCTGAACATAAGCTGGTTCAACATTTAGAAGAGCCACTTGTGAATTGTGATATGGTTCCGGTTGTTTGTATCTATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14667#0 AAGAGAGACTTTGGGGGAGGAAGAGAGAGCTTCTGTAGGTGTGATATTCTCTTTTGATCT 60
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 TATCTGATCGCCGGTATTGAGCAAGGATTGGGGTTTGGGGTAAGGATAGCGAACACAAAT 120
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GGGAATTGGGAATGGATCACCAAGTGACAGCAGGCATGTGTCACACAAGGAAATACGAGA 180
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 TGAGACCACACCGCTTCTCCCAATTAAGGAAGAGGAGGAGGGGATCCATGAGTTCAATGG 240
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 AGCTTCTTTCTCCGGTGCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGAATTAT 300
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GGCACTGCCAGCGAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCT 360
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 TGTGGCGTTGCTCACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAA 420
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GATTACGTCCTACGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGGAGGATCGCGCT 480
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GCAAGCATCTGTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGG 540
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 TGATGTGCTGTCCGGAACATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTG 600
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GTTTGGACCTCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGT 660
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GTTTGGTCCATTGGTGAGCTTTAAGCGTTTGGATTCATTGAGATACACATCTGCACTGTC 720
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 AGTTGCTCTTGCTGTGGTTTTTGTTGTCATCACTGCTGGAATTGCGATTGTCAGACTCAT 780
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 TGAAGGAACTGTGGAGATTCCCAAACTCTTTCCCGAGTTAGATGGAACTAATTCCATCTG 840
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GGAACTCTTTACAGCTGTGCCTGTTGTTGTCACTGCCTACATTTGCCACTACAATGTACA 900
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 TAGCATCGACAATGAGTTGGAAGATAGAACTCAAACCAAGCCAATTGTGCAAACTTCACT 960
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GGCTCTCTGCTCAAGTGTGTACATTGCGACAAGCTTCTTTGCATATCTCCTCTTTGGCGA 1020
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 GGGTACCCTGGCTGATGTACTCGCCAACTTTGACTCCAACCTTCATATTCCATTCAGCTC 1080
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 TGTCTTCAATGATGTTGTGAGAGTGAGCTATGTAGTCCACATCATGCTCGTCTTTCCCAT 1140
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 AGTCTTCTTCGCCCTTAGGCTCAATTTGGATGGACTGCTCTTCCCTACTGCAAGGCACAT 1200
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ------------------------------------------------------------
consensus_14667#0 TTCTCGTGACAACAGAAGGTTCGCCATTATCACGGGATCACTCCTTGCTGTAATTTATCT 1260
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 -------------------------------------------------------ATGGA 5
consensus_14667#0 TGCTGCCATCTTCATACCGAGCATCTGGGACGCGTTCCAATTCACCGGTGCCACAGCTGC 1320
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 TCACCAAGTGCCAGCAGGCATGTGTCACCCAAGGAAATACGAGATGAGACCACACCGCTT 65
consensus_14667#0 TGTTCTTATCGGTTTTATCTTTCCTGCCATGATCATACTCAGAGATCCTTAT-GGA-ATT 1378
consensus_14667#2 ------------------------GGGAGTCAATATCTTCAGAGAGCCTTATTGGA-AAT 35
consensus_14667#1 CTCCCAATTAAGGAAGAGGAGGAGGGGATTCATGAGTTCAATGGAGCTTCTTTNTCCGGT 125
* * * * * ** * * * *
consensus_14667#0 GCA--ACCAAGCGCGACAA-GA---TTTTGGCCTT-AACCATGATT--GTGCTT-GCGGT 1428
consensus_14667#2 GCA-TACCAAGCGCGACAA-GAGTGTTGTGGCCTTTAACCATGATGTGGTGCTTTGCGGT 93
consensus_14667#1 GCAGTGTTCAATCTGTCAACGACCATCGTGGGGGCTGGA-ATTATG--GCACTG-CCAGC 181
*** * * *** ** * *** ** ** * ** * *
consensus_14667#0 GCT-CTCAAATT-CTGTGGCTCTATACAGCGATGCA-CTGAACATCA-TCTTTCACAGGA 1484
consensus_14667#2 GCTTCTCAAATTTCTGTGGCTCTATACAGCGATGCAACTGAACATCAGTCTTTCACAGGA 153
consensus_14667#1 GAGCATCAAGATGCTGGGAATTATCCCTGGTATCCTGATGATCATCCTTGTGGCGTTGCT 241
* **** * *** * * * * ** * *** **** * * * *
consensus_14667#0 AAGTGGAGGCC----TAAAACTCC-AT-ACTTCGAGCGACAAAGTGGAATGTACA-GTTA 1537
consensus_14667#2 AAGTGGAGGCC----TAAAACTCCCAT-ACTTCGAGCGACAAAGTGGAATGTACACGTTA 208
consensus_14667#1 CACTGAGGCATCCATTGACATGCTGGTCAGGTGCAGCCACGAGGGCAAGATTACGTCCTA 301
* ** * * * * * * * * *** ** * * * *** **
consensus_14667#0 GAA-TGATT--TGG-TGAG-TT-TAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCG 1591
consensus_14667#2 GAAGTGATT--TGGGTGAG-TTGTAAATTAGTAATACCCAGCAAAGCAATGTGATTTTCG 265
consensus_14667#1 CGGGTGGCTGATGGGTGAAACTTTCGGTCAGTGGGGG--AGGATCGCGCTGCAAGCATCT 359
** * *** *** * * * *** ** * ** ** * **
consensus_14667#0 GTGGTAGCCA-TTGATTT-TTATTCTGGACACCTGAAAGGATTTGATTTGCTGCAT-TTG 1648
consensus_14667#2 GTGGTAGCCACTTGATTTGTTATTCTGGACACCTGAAAGGATTTGATT-GCTGCAT-TTG 323
consensus_14667#1 GTTGTAATAAACAACATTGGCATGATGATCGTTTACATGATTATCGTTGGTGATGTGCTG 419
** *** * ** ** ** * * * * * * ** * * **
consensus_14667#0 TCTAGTTTCCTGAACATAAGCTGGT--TCAACAT------TTAGAAGAGCCACTTG---- 1696
consensus_14667#2 TCTAGTTTCCTGAACATAAGCTGGT--TCAACAT------TTAGAAGAGCCACTTG---- 371
consensus_14667#1 TCCGGAA-CATCAACAAGTGGTGTTCATCACCGTGGCATCTTCGAGGGGTGGTTTGGACC 478
** * * * **** * ** * *** * * ** ** * * ***
consensus_14667#0 TGAATTGTGATATGGT--TGCGGTTGTTTGTATCTATTCCGCCAAAAAGAATTTTTCTTT 1754
consensus_14667#2 TGAATTGTGATATGGT--TCCGGTTGTTTGTATCTATTC--------------------- 408
consensus_14667#1 TCATTTGTGGAATTCTCGTCCGGTTGTTCTCCTTGCTACGACTCTTTTTGTGTTTGGTCC 538
* * ***** ** * * ******** * * *
consensus_14667#0 TTGTTCTATACATGTTTATTCAATCATCCTGAAAATTTTAAGTGGATGACTTGAAAAGGT 1814
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 ATTGGTGAGCATTAAGCGTTTGGGTAGGTGAATTCCACATTGTAATATGAGGTTCACTGT 598
consensus_14667#0 TGTTTATATATACAATAATGCACATTGAAAC----------------------------- 1845
consensus_14667#2 ------------------------------------------------------------
consensus_14667#1 GCTAACTACTGTTTACGGTTAACTCATACTAATAAAACATCTTTGGTTTATAGATTCATT 658
consensus_14667#0 -----------------
consensus_14667#2 -----------------
consensus_14667#1 GAGATACATAAAAAAAA 675
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||