These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14678#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1483 fasta sequence [AGGAAGGCGGAGAGAGAAGAAGTTTTCCGCATCGCGACCGCGCGGACGAGGCAGGCTGGCCGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGCGGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAAAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGT-ATTTCTTGGC-AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG-CT-GCTATTCTCATGCATGCTAGCTTTTCTGCTA-AACTACACTATCTTCTGGAATACAATCC-TGAATT-CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA-TTG-GCTGGGTTCTG-T-TTGGTGGGCTTCCT-TTTGATCTGC-TTAATG-TTATCGGGCAAGGTCTTGGCTTTCT-TGGCTCTGGCTTGTA-TGCCTACTGCAAGATCAAAGGGAAGTAG-ATACGGATGTCCA-GTGGGGGTCTGAAGGAGAGTAGATATTGAAG-TTTATTTTGGAGGGGCCAATGTGCCATA-CTGAA-GTAGA-GTTCGTGCTGTTTGCTCCTGCATAT-GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA-TTTCGAGTGAACA-GCCAT-TGTTTTACA-TTTTTA-CAAGGAAATAGAA-TATAACAAGATTTCAGTATTAAAAAAAAAAAA] [+] EMBL AK066917 [AGGAAGGCGGAGAGAGAAGAAGTTTTCCGCATCGCGACCGCGCGGACGAGGCAGGCTGGCCGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGCGGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAAAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGT ATTTCTTGGC AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA G ] [+] EMBL CF196274 [ GAGAGAAGAAGTTTTCCGCATCGCGACCGCGCGGACGAGGCAGGCTGGCCGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGnnn ] [+] EMBL CB668769 [ GCATCGCGACCGCGCGGACGAGGCAGGCTGGCCGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGCGGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACAATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGGGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGGGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTACAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGATAGCTTCAATGGAATCTGTGCGTGGAGTCAGTGTTCCGATGTATACAACACTGAGGCGCACAAGAGTAGTCTTTACAATGACAATGGAGT ATTTCTTGGC ACAACAGAAGCATACGCCACCTATAATCTGCAGCGTGGCTATGATTGTATTTGG ] [+] EMBL CB667431 [ GGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTGAGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGAGATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGCGGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAGAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGTGATTTCTTGGCGAAAACATAAGCATACGC ] [+] EMBL CB668420 [ AGGCCGTGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTCCGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCTAGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTACGCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAAAGATAATTTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAGAATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGT ATTTCTTGGC AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGNGTTTCAGGCGGTG CT GCTATTCTCATGCATGCT ] [+] EMBL CB666410 [ GTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAATGGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGTCTTTACAATGACAATGGAGT ATTTCTTGGC AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAa ] [-] EMBL CB667432 [ GAGT ATTTCTTGGC AAAACAGAAGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA GCCAT TGTTTTACA TTTTTA CGAGGAAATAGAA TATAACAAGATTTCAGTATTAAAAAAAAga ] [-] EMBL CB668770 [ AGCATACGCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA GCCAT TGTTTTACA TTTTGA CAAGGAAATAGAA TATAACAAGATTTCAGTA AAAAAAAAga ] [-] EMBL CB666411 [ GCCACCTATAATCGGCAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGATGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTATTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGCCTTCAA ] [+] EMBL CA767465 [ TTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGGTGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTACTATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TAAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTAAAGGAGAGTAGATATTGAAG NTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGNTTGCTCCTGCATATGGGGAGAGAAATTTTGTAGGGTTTCCTGNATGGATTTAACACTTCAGTCCTCCTGAATACAATTTTCGAGTGAACA GNCATCGGTTTTACATTTTTTA CAAGGGAATAGAA TA ] [-] EMBL CA762331 [ AACAGCTGTTTACCTTGCTACTATAAACNGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTTACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTAAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACACGCCAT TGTTTTACA TTTTTA CAAGGAAATAGAA TATAACAAGATTTCAGTATTAAAAAAAAAAAA] [+] EMBL C26271 [ AACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGGACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTG CT GCTATTCTCATGCATGCTAGCTTTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TNCCTACTGNAAGATCAAAGGGAAGTAG ATACGGA ] [+] EMBL BM421613 [ ATATATTCAGGGTGACCTGAAGAAGGCTATAGAATTTCCCTACCTCTATT CCCTGGGTTTCAGGCGGTGTCTGGCTTTTCTCATGCATGCTAGCTGTTCTGCTA AACTACACTATCTTCTGGAATACAATCC TGAATTGCTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAA TTG GCTGGGTTCTG T TTGGTGGGCTTCCT TTTGATCTGC TTAATG TTATCGGGCAAGGTCTTGGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCACGTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATACCTGAA GTAGA GTTCGT CTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATAC A TTTCGAGTGAACA GCC T TGTTTTACA TTTTTACCAAGGAAATAGAACTATNACAAGATTTCAGTATTAAAAAAAAAA ] [+] EMBL BM421118 [ CTCTATTCCCCTGGNTTTCAGGCGGTG CT GCTTTTCTCATGCATGCTAGCTTTTCTGCTATAACTACACTATCTTCTGGAATACAATCCGTGAATT CTGCACTCACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAACTTGCGCTGGGTTCTGCTATTGGTGGGCTTCCTCTTTGATCTGCGTTAATGCTTATCGGGCAAGGTCTTGGCTTTCTGTGGCTCTGGCTTGTACTGCCTACTGCAAGATCAAAGGGAAGTAGAATACGGATGTCCACGTGGGGGTCTGAAGGAGAGTAGATATTGAAGCTTTATTTTGGAGGGGCCAATGTGCCATA CTGAACGTAGACGTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA GCCAT TGTTTTACA TTTTTA CAAGGAAATAGAA TATAACAAGATTTCAGTATTCAAAAAAAAA ] [+] EMBL AU075788 [ GGCTTTCT TGGCTCTGGCTTGTA TGCCTACTGCAAGATCAAAGGGAAGTAG ATACGGATGTCCA GTGGGGGTCTGAAGGAGAGTAGATATTGAAG TTTATTTTGGAGGGGCCAATGTGCCATA CTGAA GTAGA GTTCGTGCTGTTTGCTCCTGCATAT GGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAA TTTCGAGTGAACA GCCAT TGTTTTACA TTTTTA CAAGGAAATAGAA TATAACAAGATTTCAaaan ] consensusID : consensus_14678#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 484 fasta sequence [TGGANAGGGTATGAACAGCCTGGCATGCCAGTGTGCCTTGCCACTGCCTATCCTCATACTGTGCAAGTGTGGTGTGTGTTGTAGTGTCCTTTCATATTTACCTTTTTCTGCAGGATTTCTTCACCGTCGGAATTGGCTGGGTTCTGTTTGGTGGGCTTCCTTTTGATCTGCTTAATGTTATCGGGCAGGTCTTGGCTTTCTTGGCTCTGGCTTGTATGCCTACTGCAAGATCAAAGGGAAGTAGATACGGATGTCCAGTGGGGGTCTGAAGGAGAGTAGATATTGAAGTTTATTTTGGAGGGGCCCATGTGCCATACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAGCCCTTGTTTTACATTTTTACAAGGACNATAGAATATAACAGATTTCCAGTAAAAAAAA] [+] EMBL BQ906285 [TGGANAGGGTATGAACAGCCTGGCATGCCAGTGTGCCTTGCCACTGCCTATCCTCATACTGTGCAAGTGTGGTGTGTGTTGTAGTGTCCTTTCATATTTACCTTTTTCTGCAGGATTTCTTCACCGTCGGAATTGGCTGGGTTCTGTTTGGTGGGCTTCCTTTTGATCTGCTTAATGTTATCGGGCAGGTCTTGGCTTTCTTGGCTCTGGCTTGTATGCCTACTGCAAGATCAAAGGGAAGTAGATACGGATGTCCAGTGGGGGTCTGAAGGAGAGTAGATATTGAAGTTTATTTTGGAGGGGCCCATGTGCCATACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTCCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAGCCCTTGTTTTACATTTTTACAAGGACNATAGAATATAACAGATTTCCAGTAAAAAAAA] consensusID : consensus_14678#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 287 fasta sequence [GCTTCCTTTTGATCTGCTTAATGTTATCGGGCAAGGNTCCTGGCCTTCCTTGCTCCTGGCTTGTAANCCNACTGCCAGATCCAANGGAAGTTAGATTACGGATGTCCCANTGGGGGTCTGAAAGGAGAAGTAGATATTGAAAGTTTTAATTTTGGAGGGCCCAATGTGCCATACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTCNCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAAAAA] [+] EMBL AU108239 [GCTTCCTTTTGATCTGCTTAATGTTATCGGGCAAGGNTCCTGGCCTTCCTTGCTCCTGGCTTGTAANCCNACTGCCAGATCCAANGGAAGTTAGATTACGGATGTCCCANTGGGGGTCTGAAAGGAGAAGTAGATATTGAAAGTTTTAATTTTGGAGGGCCCAATGTGCCATACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTCNCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14678#0 AGGAAGGCGGAGAGAGAAGAAGTTTTCCGCATCGCGACCGCGCGGACGAGGCAGGCTGGC 60 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 CGTCGGATCGGGCTGACCGCGTCTCGTTTAGAAATATCCTCGTGACTTCTCCTCCTCCTG 120 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 AGTCGTCGTCGTCGTGGTGGTGCTCGTCCTCCTCGGCGGCGGAGGCTTCGGGGGGCGGGA 180 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 GATCCGGGCGGCGGAGATGGCGAAGGGAGGGGGGGCGCTGCTGCCGATGTCCGCGGAGGC 240 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 GGGGAAGGGCAACGGGGGCGGGGGCGGCGGCGGCGACGATGCCGCGCTGTTCAAGGGGTC 300 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 CGCCATGACGCGGCGCGGCGCGGTCGCCGCGCTCTCCTACATGGCCTGCTCCGTGTTGCT 360 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 AGTGATGTTTAACAAAGCAGCACTGTCTTCATATAATTTCCCCTGTGCAAATGTCATTAC 420 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 GCTCCTTCAGATGGTGTGCTCAACAGGCCTTCTTTATGTTCTGAGGCGGCTAAAGATAAT 480 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 TTCATTTACAAATAGCGAGCCATCCGTGCCTTCTGATGCGTTATTCTTCGTTCCGTTCAG 540 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 AATACTGTTGCGTACTACACCTCTTTCTTTGGCTTATTTACTCTATATGTTAGCTTCAAT 600 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 GGAATCTGTGCGTGGAGTCAATGTTCCGATGTATACAACACTGAGGCGCACAACAGTAGT 660 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 CTTTACAATGACAATGGAGTATTTCTTGGCAAAACAGAAGCATACGCCACCTATAATCGG 720 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 CAGCGTGGCTTTGATTGTATTTGGAGCATTTATCGCTGGAGCTCGAGACCTGTCGTTTGA 780 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 TGCTCGTGGGTATGCTATTGTCTTTGTGGCCAACATTACAACAGCTGTTTACCTTGCTAC 840 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 TATAAACCGTATAGGAAAATCTAGTGGTCTAAATAGCTTCGGCCTGATGTGGTGCAACGG 900 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 ACTTGTCTGTGGGCCTTCAGTACTTTTTCTGACATATATTCAGGGTGACCTGAAGAAGGC 960 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 ------------------------------------------------------------ consensus_14678#0 TATAGAATTTCCCTACCTCTATTCCCCTGGGTTTCAGGCGGTGCTGCTATTCT--CATGC 1018 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 --------------------------------TGGANAGGGTATGAACAGCCTGGCATGC 28 consensus_14678#0 ATGCTAGCTTTTCTGCTAAACTACACTATCTTCTGGAATACAATCCTGAATTCTGCACTC 1078 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 CAGTGTGCCTTGCCACTGCCTATCCTCATACTGTGCAAGT--GTGGTGTGTGTTGTAGTG 86 consensus_14678#0 ACACAATCGATGTGTGGTAATTTGAAGGATTTCTTCACCGTCGGAATTGGCTGGGTTCTG 1138 consensus_14678#2 ------------------------------------------------------------ consensus_14678#1 TCCTTTCATATTTACCTTTTTCTGCAGGATTTCTTCACCGTCGGAATTGGCTGGGTTCTG 146 consensus_14678#0 TTTGGTGGGCTTCCTTTTGATCTGCTTAATGTTATCGGGCAAGGT-CTTGGCTTTCTTGG 1197 consensus_14678#2 --------GCTTCCTTTTGATCTGCTTAATGTTATCGGGCAAGGNTCCTGGCCTTCCTTG 52 consensus_14678#1 TTTGGTGGGCTTCCTTTTGATCTGCTTAATGTTATCGGGCA-GGT-CTTGGCTTTCTTGG 204 ********************************* ** * **** *** * * consensus_14678#0 CTC-TGGCTTGTATGCCTACTGCAAGATCAAAGGGAAGT-AGAT-ACGGATGTCC-AGTG 1253 consensus_14678#2 CTCCTGGCTTGTAANCCNACTGCCAGATCCAANGGAAGTTAGATTACGGATGTCCCANTG 112 consensus_14678#1 CTC-TGGCTTGTATGCCTACTGCAAGATCAAAGGGAAGT-AGAT-ACGGATGTCC-AGTG 260 *** ********* ** ***** ***** ** ****** **** ********** * ** consensus_14678#0 GGGGTCTGAAGGAG--AGTAGATATTGAAGTTT---ATTTTGGAGGGGCCAATGTGCCAT 1308 consensus_14678#2 GGGGTCTGAAAGGAGAAGTAGATATTGAAAGTTTTAATTTTGGAGGGCCCAATGTGCCAT 172 consensus_14678#1 GGGGTCTGAAGGAG--AGTAGATATTGAAGTTT---ATTTTGGAGGGGCCCATGTGCCAT 315 ********** * ************* ** *********** ** ********* consensus_14678#0 ACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTC 1368 consensus_14678#2 ACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTC 232 consensus_14678#1 ACTGAAGTAGAGTTCGTGCTGTTTGCTCCTGCATATGGGAGAGAAATTTTGTAGGTTTTC 375 ************************************************************ consensus_14678#0 C-TGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAGCCATTGTT 1427 consensus_14678#2 NCTGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAAAAA----- 287 consensus_14678#1 C-TGTATGTATTTAACACTTCAGTCCTCCTGAATACAATTTCGAGTGAACAGCCCTTGTT 434 ************************************************* consensus_14678#0 TTACATTTTTACAAGGA-AATAGAATATAACAAGATTTCAGTATTAAAAAAAAAAAA 1483 consensus_14678#2 --------------------------------------------------------- consensus_14678#1 TTACATTTTTACAAGGACNATAGAATATAACAGATTTCCAGTAAAAAAAA------- 484 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||