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Oryza sativa
cluster # 147 cluster # 147       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_147#0 length = 671 sequences # 2  

consensusID : consensus_147#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 671
fasta sequence
                              [CGGCGCGAGGGCCGGAGAAGAGAAGCGAGCAGCGAAAGCACCGGCGACCTCGGCGAGGAGCCAGGCCATGGCGGCGACGAGCCACCTCCGCCGCGCCTTCGCGCCCGCGCTTTCCCACCGCCGGGCCCACCCTGCCCCCTTCCTCTCCCGCCTCGCGTTCTTGTCCACCTCCGCATCCCCGGATCAGGCGGCGGCGGCGGCGAAGAAGGGGGAGGCTGCTGCGGGCGGGGCCGGGAAGGGAGCGGCGGCGGGAGAGGAGGAGGAGGAGAAGAAGAAGGGAGGCGACGCTGGTGACGCGAGGAAGGAAGGGGAAGACGGCGGCGGCGGCGGCGGTGAGTACGTGAACAAGGACACCGGCGAGATCGGCGGCCCGCGCGGGCCCGAGCCGACGCGGTACGGCGACTGGGAGCGCGGCGGCCGCTGCTCCGACTTCTGACCAGCTCACGCCGCGACGATGGAAGCTCCCTTCACACCGGCATGGCGTGATCTGTCAAGACATGTAGAAGATATGGTGTAGTTTTATCTATCGCAATCTGTGCTCCCCTTTCTTCTTGAATTATGAATAAATTGAAGTTGTTATGCAGGCCATGATTCTGAATTTCTGAATGTTTCAGAGTTTCAGAGCACTAATGCTCATGAATCTTACCATGGTAATCTCAAATTTTCTTATG]

[+] EMBL AK121504             [CGGCGCGAGGGCCGGAGAAGAGAAGCGAGCAGCGAAAGCACCGGCGACCTCGGCGAGGAGCCAGGCCATGGCGGCGACGAGCCACCTCCGCCGCGCCTTCGCGCCCGCGCTTTCCCACCGCCGGGCCCACCCTGCCCCCTTCCTCTCCCGCCTCGCGTTCTTGTCCACCTCCGCATCCCCGGATCAGGCGGCGGCGGCGGCGAAGAAGGGGGAGGCTGCTGCGGGCGGGGCCGGGAAGGGAGCGGCGGCGGGAGAGGAGGAGGAGGAGAAGAAGAAGGGAGGCGACGCTGGTGACGCGAGGAAGGAAGGGGAAGACGGCGGCGGCGGCGGCGGTGAGTACGTGAACAAGGACACCGGCGAGATCGGCGGCCCGCGCGGGCCCGAGCCGACGCGGTACGGCGACTGGGAGCGCGGCGGCCGCTGCTCCGACTTCTGACCAGCTCACGCCGCGACGATGGAAGCTCCCTTCACACCGGCATGGCGTGATCTGTCAAGACATGTAGAAGATATGGTGTAGTTTTATCTATCGCAATCTGTGCTCCCCTTTCTTCTTGAATTATGAATAAATTGAAGTTGTTATGCAGGCCATGATTCTGAATTTCTGAATGTTTCAGAGTTTCAGAGCACTAATGCTCATGAATCTTACCATGGTAATCTCAAATTTTCTTATG]
[+] EMBL CA755203             [    GCGAGGGCCGGAGAAGAGAAGCGAGCAGCGAAAGCACCGGCGACCTCGGCGAGGAGCCAGGCCATGGCGGCGACGAGCCACCTCCGCCGCGCCTTCGCGCCCGCGCTTTCCCACCGCCGGGCCCACCCTGCCCCCTTCCTCTCCCGCCTCGCGTTCTTGTCCACCTCCGCATCCCCGGATCAGGCGGCGGCGGCGGCGAAGAAGGGGGAGGCTGCTGCGGGCGGGGCCGGGAAGGGAGCGGCGGCGGGAGAGGAGGAGGAGGAGAAGAAGAAGGGAGGCGACGCTGGTGACGCGAGGAAGGAAGGGGAAGACGGCGGCGGCGGCGGCGGTGAGTACGTGAACAAGGACACCGGCGAGATCGGCGGCCCGCGCGGGCCCGAGCCGACGCGGTACGGCGACTGGGAGCGCGGCGGCCGCTGCTCCGACTTCTGACCAGCTCACGCCGCGACGATGGAAGCTCCCTTCACACCGGCATGGCGTGATCTGTCAAGACATGTAGAAGATATGGTGTAGTTTTATCTATCGCAATCTGTGCTCCCCTTTCTTCTTGGATTATGAATAAATTGAAGTTGTTATGCAGGCCATGATTCTGAATTTCTGGATGTTTCAGAGT                                                      ]


>consensus_147#0 CGGCGCGAGGGCCGGAGAAGAGAAGCGAGCAGCGAAAGCACCGGCGACCTCGGCGAGGAG CCAGGCCATGGCGGCGACGAGCCACCTCCGCCGCGCCTTCGCGCCCGCGCTTTCCCACCG CCGGGCCCACCCTGCCCCCTTCCTCTCCCGCCTCGCGTTCTTGTCCACCTCCGCATCCCC GGATCAGGCGGCGGCGGCGGCGAAGAAGGGGGAGGCTGCTGCGGGCGGGGCCGGGAAGGG AGCGGCGGCGGGAGAGGAGGAGGAGGAGAAGAAGAAGGGAGGCGACGCTGGTGACGCGAG GAAGGAAGGGGAAGACGGCGGCGGCGGCGGCGGTGAGTACGTGAACAAGGACACCGGCGA GATCGGCGGCCCGCGCGGGCCCGAGCCGACGCGGTACGGCGACTGGGAGCGCGGCGGCCG CTGCTCCGACTTCTGACCAGCTCACGCCGCGACGATGGAAGCTCCCTTCACACCGGCATG GCGTGATCTGTCAAGACATGTAGAAGATATGGTGTAGTTTTATCTATCGCAATCTGTGCT CCCCTTTCTTCTTGAATTATGAATAAATTGAAGTTGTTATGCAGGCCATGATTCTGAATT TCTGAATGTTTCAGAGTTTCAGAGCACTAATGCTCATGAATCTTACCATGGTAATCTCAA ATTTTCTTATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)