These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14706#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1744 fasta sequence [TTTTTNAACTCTATTTTTCGACTNCAAATCTTTTTTTCAAAGAAGTTCGCCGTTGGACTTTAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA-TGGAACATGGACCACAGGAACAAGTA-AAA-GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC-CGTCATGT-CTAGATCCGCAG-TATCCAT-C-CCATCTGGCAATTGCCAGT-TGAAAT-GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC-GATGCC-AG-GGCACATTCTTCGTCCT-GCCCCGAATGGT-GT-GTACTCAAAGTTTGTCCCCTT-GAAAT-CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTCAGTGGACAGAGGGAACTGCAGGTCACCTTCCCTCTGGATCCTCAGGAGCACGTCGAGCAAGTCCTCCTTGTCGTCGCCGTCGCCGTCGCCGGCGCCGGCGGCTCGGTTCTCTTGGTGTTCCCGGATGATGGCGTCCGTGAACGCGTACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGGCATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCTGGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCTTGAACCGGCTCCCGATGATGGCGTGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAGGTTCACGGCGGCCTGCGCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAGACGA-CGCCGCCGCCGCCATGGCTATGGCGTTTGCTCCTTTGGACTATCGAATGGGTGGATTGAACTGAAGGAGC] [-] EMBL AU032983 [TTTTTNAACTCTATTTTTCGACTNCAAATCTTTTTTTCAAAGAAGTTCGCCGNTGGACTNNAAACTTTNAATTAAATCGAGCCATACAAGTACAGGAGCTATNTNAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTNNTC CGTCATGT CTAGATCCGCAG TATCCAT C NCATCTGGCAATTGCCAGT TGAAATGGGTATAGGAGGNTTGCNAGCATAAGCTCTACATTTNCCAGA ] [-] EMBL BQ906171 [ ttTTTTTTTCAAAGAAGTTCGCCGTTGGANTGNAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAACTGGAACATGGACCACAGGAACAAGTACAAACGGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTCNNGTCATGTNCTAGATCCGCAGATATCCATACACTATCTGGCAATTGCCAGTCCGAAAT GGTACAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGCNGATGCCGAGTGGCACATTCTTCGTCCTGGCCCCGAATGGTGGTGGTACTCAAAGTNNGTCCCCTTGGAAATCCNATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGT ] [+] EMBL CB660020 [ AAGAAGTTCGCCGTTGGACTTTAAACTTTTACTTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTCAGTGGACAGAGGGAACTGCAGGTCACCTTCCCTC ] [+] EMBL CB620999 [ TTCGCCGTTGGACCCTTAA TTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAATATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT CAAAAT GGTACAGGAGGCTTGCGAGCATAAGTTCTACATTTGCCAAACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCAAATGGT GT GTACTCAAAGTTTGTCCCCTT AAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACGTCAAATCCTAAAACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCACCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACA ] [+] EMBL CB655578 [ TCGCCGTTGGACTTTAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAAACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTCAGTGGACAGAGGGAACTGCAGGTCACCT ] [+] EMBL CB672722 [ CGNTGGACTTTAAACTTTCTTTTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTCAGTGGACAGAGGGAACTGCANGTCACCTT ] [-] EMBL AU096455 [ ttttttTTGGACTTTAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGnac ] [+] EMBL CF325898 [ AAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACTACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGT GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATC ] [+] EMBL CB672642 [ ATTAAATCGAGCCCTTCAAATACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTACAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTC ] [-] EMBL AU096456 [ nTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCG ] [-] EMBL CB655577 [ TCCAACCGTTGTCGTGATTCTTTCAGTGGACAGAGGGAACTGCAGGTCACCTTCCCTCTGGATCCTCAGGAGCACGTCGAGCAAGTCCTCCTTGTCGTCGCCGTCGCCGTCGCCGGCGCCGGCGGCTCGGTTCTCTTGGTGTTCCCGGATGATGGCGTCCGTGAACGCGTACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGGCATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCTGGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCTTGAACCGGCTCCCGATGATGGCGTGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAGGTTCACGGCGGCCTGCGCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCGCGCGCG ] [-] EMBL CB643956 [ GTCGCCGGCGCCGGCGGCTCGGTTCTCTTGGTGTTCCCGGATGATGGCGTCCGTGAACGCGTACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGGCATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCTGGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCTTGAACCGGCTCCCGATGATGGCGTGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAGGTTCACGGCGGCCTGCGCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAG ] [-] EMBL CB620998 [ TCCGTGAACGCGAACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGGCATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCTGGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCCTGAACCGGCTCCCGATGATGGCGCGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAGGTTCACGGCGGCCTGCGCCGGCGGCGACGCCGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGCCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAG ] [-] EMBL CB672641 [ CTCAGGTTCCCGGCGGCTTGCTCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAGACGATCGAAGGGGCCG ] [-] EMBL CB672721 [ gtTCAGGTTCACGGCGGCATGCGCCGGTGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAGACGA CGCCGCCGCCGCCATGGCTATGGCGTTTGCT ] [-] EMBL AU174144 [ GCATTAGCGGCCCGTGGNNCCGCGCCATGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAGACGA CGCCGCCGCCGCCATGGCTATGGCTTTTGCTCCTTTGGACTATCGAATGGGTGGATTGAACTGAAGGAGC] consensusID : consensus_14706#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 262 fasta sequence [ATCGCGGGCGGCGTCCGGGGAGGAGGCGACCACGGCCTGGACCTCGCCGAGGCGGAGCAGCATGAGCGCGCCGTGGCGCCGCGCCAGGGCGCTCAGGGCGCGGTGCGGGAGGTCGCCGGCGAGGTGGTGCAGGTGGCCGATGACAGGCAGCGCCCNCGGCCCCGGCGGGAGCCTCCCCTCGCCGCCGCCGCCGCCGCCACGACGCTGCGCCGAGCGCTTGATGGTGAAGAACAGGAGCGGGATGGTGGCAAGGAGCAGCACG] [-] EMBL CB650144 [ATCGCGGGCGGCGTCCGGGGAGGAGGCGACCACGGCCTGGACCTCGCCGAGGCGGAGCAGCATGAGCGCGCCGTGGCGCCGCGCCAGGGCGCTCAGGGCGCGGTGCGGGAGGTCGCCGGCGAGGTGGTGCAGGTGGCCGATGACAGGCAGCGCCCNCGGCCCCGGCGGGAGCCTCCCCTCGCCGCCGCCGCCGCCGCCACGACGCTGCGCCGAGCGCTTGATGGTGAAGAACAGGAGCGGGATGGTGGCAAGGAGCAGCACG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14706#0 TTTTTNAACTCTATTTTTCGACTNCAAATCTTTTTTTCAAAGAAGTTCGCCGTTGGACTT 60 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 TAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTAT 120 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 ACACCACTATGATGAGGCTACTGGCAATGGAACATGGACCACAGGAACAAGTAAAAGGTC 180 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 ATGGAGCCGTCGGGCACTAACCACCATCTCCTCCGTCATGTCTAGATCCGCAGTATCCAT 240 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 CCCATCTGGCAATTGCCAGTTGAAATGGTATAGGAGGCTTGCGAGCATAAGCTCTACATT 300 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 TGCCAGACCAAATGCGATGCCAGGGCACATTCTTCGTCCTGCCCCGAATGGTGTGTACTC 360 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 AAAGTTTGTCCCCTTGAAATCAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTC 420 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 GGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGC 480 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 TCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAG 540 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 TAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAA 600 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 GTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATC 660 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 TTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGC 720 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 CGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTC 780 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 AGTGGACAGAGGGAACTGCAGGTCACCTTCCCTCTGGATCCTCAGGAGCACGTCGAGCAA 840 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 GTCCTCCTTGTCGTCGCCGTCGCCGTCGCCGGCGCCGGCGGCTCGGTTCTCTTGGTGTTC 900 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 CCGGATGATGGCGTCCGTGAACGCGTACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGG 960 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 CATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCT 1020 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 GGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCTTGAACCG 1080 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 GCTCCCGATGATGGCGTGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAG 1140 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 GTTCACGGCGGCCTGCGCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAG 1200 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 GCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAG 1260 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 CTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGAT 1320 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 CCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAA 1380 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 CTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGAC 1440 consensus_14706#1 ------------------------ATCGCGGGCGGCGTCCGGGGAGGAGGCGACCACGGC 36 ***** ** ** **** ****** ** ****** * consensus_14706#0 GGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCAT 1500 consensus_14706#1 CTGGACCTCGCCGAGGCGGAGCAGCATGAGCGCGCCGTGGCGCCGCGCCAGGGCGCTCAG 96 *** ************************** ******************* *** ** consensus_14706#0 GGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCA 1560 consensus_14706#1 GGCGCGGTGCGGGAGGTCGCCGGCGAGGTGGTGCAGGTGGCCGATGACAGGCAGCGCCCN 156 **** ********** **** ** ************** ***** ** ****** *** consensus_14706#0 CGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGAC 1620 consensus_14706#1 CGGCCCCGGCGGGAGCCTCCCCTCGCCGCCGCCGCCGC-CGCCACGACGCTGCGCCGAGC 215 **** ****** **** *** * ****** * ** ****** ** * * consensus_14706#0 GAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAG-ACGACGCCG 1679 consensus_14706#1 G-----CTTGATGGT--GAAGAACAGGAGCGGGATGGTGGCAAGGAGCAGCACG------ 262 * * ***** * *** ** ** * *** * ** *** *** consensus_14706#0 CCGCCGCCATGGCTATGGCGTTTGCTCCTTTGGACTATCGAATGGGTGGATTGAACTGAA 1739 consensus_14706#1 ------------------------------------------------------------ consensus_14706#0 GGAGC 1744 consensus_14706#1 ----- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||