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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14706#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1744 fasta sequence
[TTTTTNAACTCTATTTTTCGACTNCAAATCTTTTTTTCAAAGAAGTTCGCCGTTGGACTTTAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA-TGGAACATGGACCACAGGAACAAGTA-AAA-GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC-CGTCATGT-CTAGATCCGCAG-TATCCAT-C-CCATCTGGCAATTGCCAGT-TGAAAT-GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC-GATGCC-AG-GGCACATTCTTCGTCCT-GCCCCGAATGGT-GT-GTACTCAAAGTTTGTCCCCTT-GAAAT-CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTCAGTGGACAGAGGGAACTGCAGGTCACCTTCCCTCTGGATCCTCAGGAGCACGTCGAGCAAGTCCTCCTTGTCGTCGCCGTCGCCGTCGCCGGCGCCGGCGGCTCGGTTCTCTTGGTGTTCCCGGATGATGGCGTCCGTGAACGCGTACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGGCATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCTGGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCTTGAACCGGCTCCCGATGATGGCGTGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAGGTTCACGGCGGCCTGCGCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAGACGA-CGCCGCCGCCGCCATGGCTATGGCGTTTGCTCCTTTGGACTATCGAATGGGTGGATTGAACTGAAGGAGC]
[-] EMBL AU032983 [TTTTTNAACTCTATTTTTCGACTNCAAATCTTTTTTTCAAAGAAGTTCGCCGNTGGACTNNAAACTTTNAATTAAATCGAGCCATACAAGTACAGGAGCTATNTNAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTNNTC CGTCATGT CTAGATCCGCAG TATCCAT C NCATCTGGCAATTGCCAGT TGAAATGGGTATAGGAGGNTTGCNAGCATAAGCTCTACATTTNCCAGA ]
[-] EMBL BQ906171 [ ttTTTTTTTCAAAGAAGTTCGCCGTTGGANTGNAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAACTGGAACATGGACCACAGGAACAAGTACAAACGGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTCNNGTCATGTNCTAGATCCGCAGATATCCATACACTATCTGGCAATTGCCAGTCCGAAAT GGTACAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGCNGATGCCGAGTGGCACATTCTTCGTCCTGGCCCCGAATGGTGGTGGTACTCAAAGTNNGTCCCCTTGGAAATCCNATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGT ]
[+] EMBL CB660020 [ AAGAAGTTCGCCGTTGGACTTTAAACTTTTACTTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTCAGTGGACAGAGGGAACTGCAGGTCACCTTCCCTC ]
[+] EMBL CB620999 [ TTCGCCGTTGGACCCTTAA TTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAATATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT CAAAAT GGTACAGGAGGCTTGCGAGCATAAGTTCTACATTTGCCAAACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCAAATGGT GT GTACTCAAAGTTTGTCCCCTT AAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACGTCAAATCCTAAAACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCACCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACA ]
[+] EMBL CB655578 [ TCGCCGTTGGACTTTAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAAACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTCAGTGGACAGAGGGAACTGCAGGTCACCT ]
[+] EMBL CB672722 [ CGNTGGACTTTAAACTTTCTTTTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTCAGTGGACAGAGGGAACTGCANGTCACCTT ]
[-] EMBL AU096455 [ ttttttTTGGACTTTAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGnac ]
[+] EMBL CF325898 [ AAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACTACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGT GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATC ]
[+] EMBL CB672642 [ ATTAAATCGAGCCCTTCAAATACAGGAGCTATCCCAACTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGCTCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAGTACAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAAGTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATCTTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGCCGTCCCCGCAGTCTC ]
[-] EMBL AU096456 [ nTAGTAGTTGTATACACCACTATGATGAGGCTACTGGCAA TGGAACATGGACCACAGGAACAAGTA AAA GGTCATGGAGCCGTCGGGCACTAACCACCATCTCCTC CGTCATGT CTAGATCCGCAG TATCCAT C CCATCTGGCAATTGCCAGT TGAAAT GGTATAGGAGGCTTGCGAGCATAAGCTCTACATTTGCCAGACCAAATGC GATGCC AG GGCACATTCTTCGTCCT GCCCCGAATGGT GT GTACTCAAAGTTTGTCCCCTT GAAAT CAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTCGGGTTCATCCCAATACTGAGGGTCCCTGCTAATCG ]
[-] EMBL CB655577 [ TCCAACCGTTGTCGTGATTCTTTCAGTGGACAGAGGGAACTGCAGGTCACCTTCCCTCTGGATCCTCAGGAGCACGTCGAGCAAGTCCTCCTTGTCGTCGCCGTCGCCGTCGCCGGCGCCGGCGGCTCGGTTCTCTTGGTGTTCCCGGATGATGGCGTCCGTGAACGCGTACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGGCATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCTGGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCTTGAACCGGCTCCCGATGATGGCGTGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAGGTTCACGGCGGCCTGCGCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCGCGCGCG ]
[-] EMBL CB643956 [ GTCGCCGGCGCCGGCGGCTCGGTTCTCTTGGTGTTCCCGGATGATGGCGTCCGTGAACGCGTACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGGCATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCTGGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCTTGAACCGGCTCCCGATGATGGCGTGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAGGTTCACGGCGGCCTGCGCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAG ]
[-] EMBL CB620998 [ TCCGTGAACGCGAACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGGCATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCTGGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCCTGAACCGGCTCCCGATGATGGCGCGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAGGTTCACGGCGGCCTGCGCCGGCGGCGACGCCGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGCCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAG ]
[-] EMBL CB672641 [ CTCAGGTTCCCGGCGGCTTGCTCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAGACGATCGAAGGGGCCG ]
[-] EMBL CB672721 [ gtTCAGGTTCACGGCGGCATGCGCCGGTGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAGGCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAGCTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGATCCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAACTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGACGGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAGACGA CGCCGCCGCCGCCATGGCTATGGCGTTTGCT ]
[-] EMBL AU174144 [ GCATTAGCGGCCCGTGGNNCCGCGCCATGTCGCGCATGGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCACGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGACGAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAGACGA CGCCGCCGCCGCCATGGCTATGGCTTTTGCTCCTTTGGACTATCGAATGGGTGGATTGAACTGAAGGAGC]
consensusID : consensus_14706#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 262 fasta sequence
[ATCGCGGGCGGCGTCCGGGGAGGAGGCGACCACGGCCTGGACCTCGCCGAGGCGGAGCAGCATGAGCGCGCCGTGGCGCCGCGCCAGGGCGCTCAGGGCGCGGTGCGGGAGGTCGCCGGCGAGGTGGTGCAGGTGGCCGATGACAGGCAGCGCCCNCGGCCCCGGCGGGAGCCTCCCCTCGCCGCCGCCGCCGCCGCCACGACGCTGCGCCGAGCGCTTGATGGTGAAGAACAGGAGCGGGATGGTGGCAAGGAGCAGCACG]
[-] EMBL CB650144 [ATCGCGGGCGGCGTCCGGGGAGGAGGCGACCACGGCCTGGACCTCGCCGAGGCGGAGCAGCATGAGCGCGCCGTGGCGCCGCGCCAGGGCGCTCAGGGCGCGGTGCGGGAGGTCGCCGGCGAGGTGGTGCAGGTGGCCGATGACAGGCAGCGCCCNCGGCCCCGGCGGGAGCCTCCCCTCGCCGCCGCCGCCGCCGCCACGACGCTGCGCCGAGCGCTTGATGGTGAAGAACAGGAGCGGGATGGTGGCAAGGAGCAGCACG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14706#0 TTTTTNAACTCTATTTTTCGACTNCAAATCTTTTTTTCAAAGAAGTTCGCCGTTGGACTT 60
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 TAAACTTTTAATTAAATCGAGCCATACAAGTACAGGAGCTATCCCAACTAGTAGTTGTAT 120
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 ACACCACTATGATGAGGCTACTGGCAATGGAACATGGACCACAGGAACAAGTAAAAGGTC 180
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 ATGGAGCCGTCGGGCACTAACCACCATCTCCTCCGTCATGTCTAGATCCGCAGTATCCAT 240
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 CCCATCTGGCAATTGCCAGTTGAAATGGTATAGGAGGCTTGCGAGCATAAGCTCTACATT 300
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 TGCCAGACCAAATGCGATGCCAGGGCACATTCTTCGTCCTGCCCCGAATGGTGTGTACTC 360
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 AAAGTTTGTCCCCTTGAAATCAATGTTGCTATCCTCAAACCTCTCAGGGATAAATTCCTC 420
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 GGGTTCATCCCAATACTGAGGGTCCCTGCTAATCGCCCACGCGTTCACAAGCACCATTGC 480
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 TCCTTTGGGCACATCGAATCCTAAGACTTGGCAGGTGTTTCTACACTCCCGTGGCAGTAG 540
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 TAGAGGCACAGGAGGATGCAGCCGCAACGCCTCCTTGATGACAAGGTGCATGTAGTTCAA 600
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 GTTGCTTATTGCATCTTCAGTTACTCTGTCACGACCGGCAAGTGTTTGTCGTACCTCATC 660
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 TTGTACCTTGTGCATCACTCTTGGGTTTCTTATGAGCTCGGCCATGATCCATTGCAACGC 720
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 CGTCCCCGCAGTCTCGCTGCCTCCCGCAAACATGTCTCCAACCGTTGTCTTGATTCTTTC 780
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 AGTGGACAGAGGGAACTGCAGGTCACCTTCCCTCTGGATCCTCAGGAGCACGTCGAGCAA 840
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 GTCCTCCTTGTCGTCGCCGTCGCCGTCGCCGGCGCCGGCGGCTCGGTTCTCTTGGTGTTC 900
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 CCGGATGATGGCGTCCGTGAACGCGTACGCCTCCCGCCGGTGCTGCATCATCCGCCGCGG 960
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 CATGCGGCTGAGCCACATGGCGAGGCGCGACGACGGGTAGAGGTCCGGCAAGGTGTGCCT 1020
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 GGCGAACAGCTTGAGCCCTCGCTCCAGGAGCATCAGGTACTTGTCCCTGTCCTTGAACCG 1080
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 GCTCCCGATGATGGCGTGCACCGCCGAGTCGGCGGCGTACGCCGACAGCAGCGCGCTCAG 1140
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 GTTCACGGCGGCCTGCGCCGGCGACGGCGACGACGACGTCGCCGCCACGGCGCGGAGCAG 1200
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 GCGGCCGACCTCCTCCTCGCGGACGGCGCGGAAGGACTGGACGCGTCGCGCGCTGAGCAG 1260
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 CTCGACGGTGCAGACCTTGCGGAGCTCCCGCCACTCGTCGCCGTAGGGCGCGAAGATGAT 1320
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 CCCCTCGGTGCCCGCGGGGAAGACGAGCCGCGTCATCCGGCTCATGGGTCGCGTGGCGAA 1380
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 CTCGATGTCGCGCGTCCTCATCACCTCGCGCGCCGCCTCCGCGGAGGACGCCACCACGAC 1440
consensus_14706#1 ------------------------ATCGCGGGCGGCGTCCGGGGAGGAGGCGACCACGGC 36
***** ** ** **** ****** ** ****** *
consensus_14706#0 GGGGAGCTCGCCGAGGCGGAGCAGCATGAGCGGGCCGTGGCGCCGCGCCAGGTCGCGCAT 1500
consensus_14706#1 CTGGACCTCGCCGAGGCGGAGCAGCATGAGCGCGCCGTGGCGCCGCGCCAGGGCGCTCAG 96
*** ************************** ******************* *** **
consensus_14706#0 GGCGTGGTGCGGGAGCGCGCCCGCCAGGTGGTGCAGGTGCCCGATCACCGGCAGCCCCCA 1560
consensus_14706#1 GGCGCGGTGCGGGAGGTCGCCGGCGAGGTGGTGCAGGTGGCCGATGACAGGCAGCGCCCN 156
**** ********** **** ** ************** ***** ** ****** ***
consensus_14706#0 CGGCGACGGCGGCAGCCGCCCGCCCTCGCCGCGCCGGCGCGCCACCCAGCCGAAGTAGAC 1620
consensus_14706#1 CGGCCCCGGCGGGAGCCTCCCCTCGCCGCCGCCGCCGC-CGCCACGACGCTGCGCCGAGC 215
**** ****** **** *** * ****** * ** ****** ** * *
consensus_14706#0 GAGAGGCACGATGGCAAGGAGAGCAACGACGAGCAGGTAGGCCAGAACAG-ACGACGCCG 1679
consensus_14706#1 G-----CTTGATGGT--GAAGAACAGGAGCGGGATGGTGGCAAGGAGCAGCACG------ 262
* * ***** * *** ** ** * *** * ** *** ***
consensus_14706#0 CCGCCGCCATGGCTATGGCGTTTGCTCCTTTGGACTATCGAATGGGTGGATTGAACTGAA 1739
consensus_14706#1 ------------------------------------------------------------
consensus_14706#0 GGAGC 1744
consensus_14706#1 -----
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||