These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14714#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1667 fasta sequence [NCGGCTCTCTAACACGAGCCCAATCACGAGGAGGGCGGGCAAGTGCGGCAACCGCATCGCATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCGGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATTCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCAT-GGAGAAAGTCAAGCCTATGATTGATGCAGCTGGTGATGCT-GGTGTTAATATTTTGTGTTTACA-GGAAGCTTGGACAATGCCTTTTGCCTTCTGCACACGTGAGAAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGGAGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATATAACATGGTAATTGTGAGCCCAATCCTCGAAAGAGATGTAAACCACGGAGAGATTGTATGGAATACAGCTGTTGTCATAGGTAATCATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATAT-GGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATT-GAGGCCAG-AAATGCT-GCAATTGCAAATAGCTACTTT-GTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTT-CCCAAA-CCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG-TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCACAGTTCATTAACAAGTTAAAAAAACTC] [+] EMBL AU093486 [NCGGCTCTCTAACACGAGCCCAATCACGAGGAGGGCGGGCAAGTGCGGCAACCGCATCGCATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGC GCGGCGGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTA ] [+] EMBL AK060443 [ AACCGCATCGCATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCGGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATTCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCAT GGAGAAAGTCAAGCCTATGATTGATGCAGCTGGTGATGCT GGTGTTAATATTTTGTGTTTACA GGAAGCTTGGACAATGCCTTTTGCCTTCTGCACACGTGAGAAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGGAGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATATAACATGGTAATTGTGAGCCCAATCCTCGAAAGAGATGTAAACCACGGAGAGATTGTATGGAATACAGCTGTTGTCATAGGTAATCATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATAT GGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATT GAGGCCAG AAATGCT GCAATTGCAAATAGCTACTTT GTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTT CCCAAA CCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAA ] [+] EMBL CF297216 [ tAACCGCATCGCATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCGGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATTCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCAT GGAGAAAGTCAAGCCTATGATTGATGCAGCTGGTGATGCT GGTGTTAATATTTTGTGTTTACA GGAAGCTTGGACAATGCCTTTTGCCTTCTGCACACGTGA AAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGGAGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATA ] [+] EMBL CB658898 [ CAGCCCTCAGACGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCCGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATTCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCAT GGAAAAAGTCAAGCCTATGATTGATGCAGCTGGTGATGCT GGTGTTAATATTTTGTGTTTACA GGAAGCTTGGACAATGCCTTTTGCCTTCTGCACACGTGAGAAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGGAGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATATAACATGGTAATTGTGAGCCCAATCCTCGAAAGAGATGTAAACCACGGAGAGATTGTATGGAATACAGCTGTTGTCATAGGTAATCATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATATGGGGAAAATCGGAGT AACATTTGTTA ] [+] EMBL C73573 [ GTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACANCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGANAAAGAGTATCTNAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATNCCTACCACCAGTNATTTTGCAGATCAGAAGAAGGCTATTATGGGAGAAAGTTAAGCCTATGATTNATGCAGCNGGTGATGCTGGGTGTNAATATTTTGTGTTTACAGGGAAGCTTGGACAATGCC TTTGCCTTCTGCACACGTTANAAAA ] [-] EMBL CB658899 [ GGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATT GAGGCCAG AAATGCT GCAATTGCAAATAGCTACTTT GTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTT CCCAAA CCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCACAGTTCATTAACAAGTT ] [+] EMBL AU094470 [ ggcCCCATTGGAGGCCAGAAAATGCTGGCAATNGCAAATAGCTACTTTGGTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTTCCCCAAACCCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCAaaaa ] [-] EMBL CF297215 [ ACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCACAaaaaa ] [-] EMBL CF325867 [ AAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATAATCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCACAGTTCAAAAAAAAAAAAAAAAAACTC] [+] EMBL CA764657 [ AAACATTAATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGGTTGTGTATGATCTGTAAAGATAATGCACACCAAACCATATGCCATAGTAATGGTTT ] consensusID : consensus_14714#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1147 fasta sequence [GAAGATAGCGCTGTTTTTGGACTACGACGGTACACTGTCGCCAATTGTCGATGAACCTGACAATGCTATCATGTCTGACCAGATGCGCGAGGTGGTGAGGAATGCTGCCTTGCATCTACCCACTGCGATTATCAGTGGAAGGTCTCGTGATAAGGTGTTTGATTTTGTTAAACTAACAGAATTGTACTATGCTGGTAGCCATGGAATGGACATCATGGGTCCAGTTGGGGAACATGATTCAGTTACTAACCATAGGAGCTCCATTAACTCAAATAGAAAGCAGGGCAAGGGAGTGAAGATCTTCCAGGCTGGTACTGAATTCTTACCAATGATCAATGAGGTTTTTAGATTGCTCATCGATAAGACAAAGGCAATCGACGGTGTGAAAATTGAGAACAACAAGTTCTGTGTATCGGTGCACTACCGCAATGTTGAGGAGAAGAATTGGCAACTTGTTTCTCAATGCACAAATGATGTCCTAAAAGTCTACCCTCGCCTCCGATTGACTCATGGACGAAAAGTTTTGGAAATTCGTCCAGTGATAGACTGGAACAAGGGGAAGGCTGTGGAGTTCTTGCTGGACTCCCTAGATCTAGCTAGCTGTAAAAATGTTCTCCCTATTTACATCGGGGATGATTGTACCGACGAGGATGCTTTTAAGGTTCTTCGTGACGATAAAAGGGGTTTCGGGATTCTGGTGTCATCTGTACCAAAGGATTCTCATGCCCTATATTCTCTGATTGATCCATCTGAGGTTATGGAATTCTTGAAAAGACTAGTGATGTGGAAGAACGAAGAAGCATCACATAATAAGTAGATTATAAATATATCTGATGTTTACTCTAGGGTAGATTTCTGAATTCTGACAAAGAGAATAAGCAGAAGGGCAACAGAATTAACTTGGACATAGTGGACAGTTGTACATCATATAGTTAATCCATTTTCTTAGCCTAGCAAGTGGCAAAATAAAAGTAATTGCCATGTTGTACAAGAATGCGAAGCATTCTGCACAAGTCCAGTTCTTTGAATAATGGTCTCAGTTGTAGAATGGTGTAACTTGTTAATGAACTGTGATATAAATTTTTGGGCTAAACCATTACTATGGCATATGGTTTGGTGTGCATTATCTTTAAAAAAAAAAAAAAAA] [+] EMBL AK070085 [GAAGATAGCGCTGTTTTTGGACTACGACGGTACACTGTCGCCAATTGTCGATGAACCTGACAATGCTATCATGTCTGACCAGATGCGCGAGGTGGTGAGGAATGCTGCCTTGCATCTACCCACTGCGATTATCAGTGGAAGGTCTCGTGATAAGGTGTTTGATTTTGTTAAACTAACAGAATTGTACTATGCTGGTAGCCATGGAATGGACATCATGGGTCCAGTTGGGGAACATGATTCAGTTACTAACCATAGGAGCTCCATTAACTCAAATAGAAAGCAGGGCAAGGGAGTGAAGATCTTCCAGGCTGGTACTGAATTCTTACCAATGATCAATGAGGTTTTTAGATTGCTCATCGATAAGACAAAGGCAATCGACGGTGTGAAAATTGAGAACAACAAGTTCTGTGTATCGGTGCACTACCGCAATGTTGAGGAGAAGAATTGGCAACTTGTTTCTCAATGCACAAATGATGTCCTAAAAGTCTACCCTCGCCTCCGATTGACTCATGGACGAAAAGTTTTGGAAATTCGTCCAGTGATAGACTGGAACAAGGGGAAGGCTGTGGAGTTCTTGCTGGACTCCCTAGATCTAGCTAGCTGTAAAAATGTTCTCCCTATTTACATCGGGGATGATTGTACCGACGAGGATGCTTTTAAGGTTCTTCGTGACGATAAAAGGGGTTTCGGGATTCTGGTGTCATCTGTACCAAAGGATTCTCATGCCCTATATTCTCTGATTGATCCATCTGAGGTTATGGAATTCTTGAAAAGACTAGTGATGTGGAAGAACGAAGAAGCATCACATAATAAGTAGATTATAAATATATCTGATGTTTACTCTAGGGTAGATTTCTGAATTCTGACAAAGAGAATAAGCAGAAGGGCAACAGAATTAACTTGGACATAGTGGACAGTTGTACATCATATAGTTAATCCATTTTCTTAGCCTAGCAAGTGGCAAAATAAAAGTAATTGCCATGTTGTACAAGAATGCGAAGCATTCTGCACAAGTCCAGTTCTTTGAATAATGGTCTCAGTTGTAGAATGGTGTAACTTGTTAATGAACTGTGATATAAA ] [-] EMBL CA763265 [ ggccgagACAAGGGGAAGGCTGTGGAGTTCTTGCTGGACTCCCTAGATCTAGCTAACTGTAAAAATGTTCTCCCTATTTACATCGGGGACGATCGTACCGACGAGGACGCTTTTAAGGTTCTTCGTGACGATAAAAGGGGTTTCGGGATTCTGGTGTCATCTGTACCAAAAGATTCTCATGCCCTGTATTCTCTGATTGATCCATCTGAGGTTATGGAATTCTTGAAAAGACTAGTTATGTGGAAGAAGGAAGAAGCCTCCCATAATAAGTAGATTATAAATATCTCTGATGTTTACTCTAGGGTAGATTTTTGAGTTCTGACAAAGAGAATAAGCAGAAGGGCAACAGAATTAACTTGGACATAGTGGACAGTTGTACATCATATAGTTAATCCATTTTCTTAGCCTGGCAAGTGGCAAAATAAAAGTAATTGCCATGTTGTACAAGAATGCGAAGCATTCTGCAAAAGTCCAGTTCTTTGAATAATGGTCCCAGTTGTAGAATGGTGTAACTTGTTAATGAACTGTGATATAAATTTTTGGGCTAAACCATTACTATGGCATATGGTTTGGTGTGCATTATCTTTAAAAAAAAAAAAAAAA] consensusID : consensus_14714#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 854 fasta sequence [CATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATATGGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATTGAGGCCAGAAATGCTGCAATTGCAAATAGCTACTTTGTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTTCCCAAACCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAA--CTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTTCTTAGGGTTGGAAACATTGATACTCATTTTGCTTTCAAC-CTAAAAGGAAAAAAAAAAAAAAAAAAA] [-] EMBL CB672759 [CATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATATGGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATTGAGGCCAGAAATGCTGCAATTGCAAATAGCTACTTTGTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTTCCCAAACCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAA CTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTTCTTAGGGTTGGAAACATTGATACTCATTTTGCTTTCAAC CTAAAAGG ] [+] EMBL CB000874 [ TCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACT ] [+] EMBL AU093485 [ CAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGNTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGNCAAGTGGGGCTTCCGCATGACTGCCCGTTATGACNCGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGNCCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAA CTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL BU572375 [ CAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGCGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTCCACATTTAGAGTATTCAGTTTGAGGGAAGTCTTTTCAAAATCTGCCATT ] consensusID : consensus_14714#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 200 fasta sequence [GTGCCAAAGGAGAGCACCTCAATTCTGGGAACTGTTCCACAATTTAGAGTATTCAGTTTGAGGGAAGTCTTTTCAAATCTCCATTGGGGAATCGATTCTTTCAGTTTTCGTATGCAAAGAAAAAATTTGTGTACATGTTTACCTCCAATTGCCTTTACTTGGAGTTGGAAACATTAATACTCATTTGCTTTCTGCTGTAA] [+] EMBL BI797791 [GTGCCAAAGGAGAGCACCTCAATTCTGGGAACTGTTCCACAATTTAGAGTATTCAGTTTGAGGGAAGTCTTTTCAAATCTCCATTGGGGAATCGATTCTTTCAGTTTTCGTATGCAAAGAAAAAATTTGTGTACATGTTTACCTCCAATTGCCTTTACTTGGAGTTGGAAACATTAATACTCATTTGCTTTCTGCTGTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14714#0 NCGGCTCTCTAACACGAGCCCAATCACGAGGAGGGCGGGCAAGTGCGGCAACCGCATCGC 60 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ------------------------------------------------------------ consensus_14714#0 ATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGA 120 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ------------------------------------------------------------ consensus_14714#0 GCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCGGGGTCGATCGGAGGGTACGA 180 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ------------------------------------------------------------ consensus_14714#0 GTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCG 240 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ------------------------------------------------------------ consensus_14714#0 GCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCAC 300 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ------------------------------------------------------------ consensus_14714#0 ATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAA 360 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ------------------------------------------------------------ consensus_14714#0 AGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTAT 420 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ------------------------------------------------------------ consensus_14714#0 TCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCATGGAGAAAGTCAAGCCTAT 480 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ------------------------------------------------------GAAGAT 6 consensus_14714#0 GATTGATGCAGCTGGTGATGCTGGTGTTAATATTTTGTGTTTACAGGAAGCTTGGACAAT 540 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 AGCGCTGTTTTTGGACTACGACGGTACACTGTCGCCAATTGTCGATGAACCTGACAATGC 66 consensus_14714#0 GCCTTTTGCCTTCTGCACACGTGAGAAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGG 600 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 TATCATGTCTGACCAGATGCGCGAGGTGGTGAGGAATGCTGCCTTGCATCTACCCACTGC 126 consensus_14714#0 AGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATATAACATGGTAATTGTGAGCCC 660 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 GATTATCAGTGGAAGGTCTCGTGATAAGGTGTTTGATTTTGTTAAACTAACAGAATTGTA 186 consensus_14714#0 AATCCTCGAAAGAGATGTAAACCACGGAGAGATTGTATGGAATACAGCTGTTGTCATAGG 720 consensus_14714#2 ------------------------------------------------------------ consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 CTATGCTGGTAGCCATGGAATGGACATCATGGGTCCAGTTGGGGAACATGATTCAGTTAC 246 consensus_14714#0 TAATCATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTT 780 consensus_14714#2 ----CATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTT 56 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 TAACCATAGGAGCTCCATTAACTCAAATAGAAAGCAGGGCAAGG-GAGTGAAGATCTTCC 305 consensus_14714#0 CAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATA 840 consensus_14714#2 CAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATA 116 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 AGGCTGGTACTGAATTCTTACCAATGATCAATGAGGTTTTTAGATTGCTCATCGATAAGA 365 consensus_14714#0 TGGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTT 900 consensus_14714#2 TGGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTT 176 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 CAAAGGCAATCGACGGTGTGAAAATTGAGAACAACAAGTTCTGTGTATCGGTGCACTACC 425 consensus_14714#0 TGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGA 960 consensus_14714#2 TGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGA 236 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 GCAATGTTGAGGAGAAGAATTGGCAACTTGTTTCTCAATGCACAAATGATGTCCTAAAAG 485 consensus_14714#0 ACCAATGTGGCCCATTGAGGCCAGAAATGCTGCAATTGCAAATAGCTACTTTGTCGGGTC 1020 consensus_14714#2 ACCAATGTGGCCCATTGAGGCCAGAAATGCTGCAATTGCAAATAGCTACTTTGTCGGGTC 296 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 TCTACCCTCGCCTCCGATTGACTCATGGACGAAAAGTTTTGGAAATTCGTCCAGTGATAG 545 consensus_14714#0 AATTAACCGGGTTGGCACAGAGGTCTTCCCAAACCCATTCACTTCTGGTGACGGGAAACC 1080 consensus_14714#2 AATTAACCGGGTTGGCACAGAGGTCTTCCCAAACCCATTCACTTCTGGTGACGGGAAACC 356 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 ACTGGAACAAGGGGAAGGCTGTGGAGTTCTTGCTGGACTCCCTAGATCTAGCTAGCTGTA 605 consensus_14714#0 TCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTC 1140 consensus_14714#2 TCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTC 416 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 AAAATGTTCTCCCTATTTACATCGGGGATGATTGTACCGACGAGGATGCTTTTAAGGTTC 665 consensus_14714#0 TTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAA 1200 consensus_14714#2 TTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAA 476 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 TTCGTGACGATAAAAGGGGTTTCGGGATTCTGGTGTCATC-TGTACCAAAGGATTCTCAT 724 consensus_14714#0 CTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTA 1260 consensus_14714#2 CTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTA 536 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 GCCCTATATTCTCTGATTGATCCATCTGAGGTTATGGAATTCTTGAAAAGACTAGTGATG 784 consensus_14714#0 TGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCC 1320 consensus_14714#2 TGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCC 596 consensus_14714#3 ------------------------------------------------------------ consensus_14714#1 TGGAAGAACGAAGAAGCATCACATAATAAGTAGATTATAAATATATCTGATGTTTACTCT 844 consensus_14714#0 CTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCAC-TCAATT 1379 consensus_14714#2 CTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCAC-TCAATT 655 consensus_14714#3 ------------------------------------GTGCCAAAGGAGAGCACCTCAATT 24 consensus_14714#1 AGGGTAGATTTCTGAATTCTGACAAAGAGAAT----AAGCAGAAGGGCAACAGAATTAAC 900 ** **** * ** * consensus_14714#0 CTGGAACTTACAC----ATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCAT 1435 consensus_14714#2 CTGGAACTTACAC----ATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCAT 711 consensus_14714#3 CTGGGAACTGTTCCACAATTTAGAGTATTCAGTTTGAGGGAAGTCTTTTCAAATCTCCAT 84 consensus_14714#1 TTGGACATAGTGGACAGTTGTACATCATATAGTT--AATCCATTTTCTTAGCCTAGCAAG 958 *** * ** * ** **** * * * * * * consensus_14714#0 TGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAA-TTTGTATACATGTTT 1494 consensus_14714#2 TGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAA-TTTGTATACATGTTT 770 consensus_14714#3 TGGGGAATCGAT----TCTTTCAGTTTTCGTATGCAAAGAAAAAATTTGTGTACATGTTT 140 consensus_14714#1 TGGCAAAATAAAAGTAATTGCCATGTTGTACAAG-AATGCGAAGCATTCTGCACAAGTCC 1017 *** ** * * ** ** * * ** * ** ** * *** ** consensus_14714#0 ACCTCAAATTGCCTTTTACTTGGAGTTGGA-AACATTGATACTCATTTT-GCTTTCTGCT 1552 consensus_14714#2 ACCTCAAATTGCCTTTTTCTTAGGGTTGGA-AACATTGATACTCATTTT-GCTTTC---- 824 consensus_14714#3 ACCTCCAATTGCCTTT-ACTTGGAGTTGGA-AACATTAATACTCATTT--GCTTTCTGCT 196 consensus_14714#1 AGTTCT--TTGAATAATGGTCTCAGTTGTAGAATGGTGTAACTTGTTAATGAACTGTGAT 1075 * ** *** * * **** * ** * *** ** * * consensus_14714#0 GTAAATTTGCAAGGTATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATAT 1612 consensus_14714#2 ---AACCTAAAAGGAAAAAAAAAAAAAAAAAAA--------------------------- 854 consensus_14714#3 GTAA-------------------------------------------------------- 200 consensus_14714#1 ATAAATTTTTGGGCTAAACCATTACTATGGCATATGGTTTGGTGTGCATTATCTTTAAAA 1135 * consensus_14714#0 TAATGATTTAGCCCAAAAATTTATATCACAGTTCATTAACAAGTTAAAAAAACTC 1667 consensus_14714#2 ------------------------------------------------------- consensus_14714#3 ------------------------------------------------------- consensus_14714#1 AAAAAAAAAAAA------------------------------------------- 1147 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||