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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14714#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1667 fasta sequence
[NCGGCTCTCTAACACGAGCCCAATCACGAGGAGGGCGGGCAAGTGCGGCAACCGCATCGCATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCGGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATTCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCAT-GGAGAAAGTCAAGCCTATGATTGATGCAGCTGGTGATGCT-GGTGTTAATATTTTGTGTTTACA-GGAAGCTTGGACAATGCCTTTTGCCTTCTGCACACGTGAGAAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGGAGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATATAACATGGTAATTGTGAGCCCAATCCTCGAAAGAGATGTAAACCACGGAGAGATTGTATGGAATACAGCTGTTGTCATAGGTAATCATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATAT-GGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATT-GAGGCCAG-AAATGCT-GCAATTGCAAATAGCTACTTT-GTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTT-CCCAAA-CCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG-TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCACAGTTCATTAACAAGTTAAAAAAACTC]
[+] EMBL AU093486 [NCGGCTCTCTAACACGAGCCCAATCACGAGGAGGGCGGGCAAGTGCGGCAACCGCATCGCATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGC GCGGCGGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTA ]
[+] EMBL AK060443 [ AACCGCATCGCATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCGGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATTCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCAT GGAGAAAGTCAAGCCTATGATTGATGCAGCTGGTGATGCT GGTGTTAATATTTTGTGTTTACA GGAAGCTTGGACAATGCCTTTTGCCTTCTGCACACGTGAGAAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGGAGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATATAACATGGTAATTGTGAGCCCAATCCTCGAAAGAGATGTAAACCACGGAGAGATTGTATGGAATACAGCTGTTGTCATAGGTAATCATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATAT GGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATT GAGGCCAG AAATGCT GCAATTGCAAATAGCTACTTT GTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTT CCCAAA CCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAA ]
[+] EMBL CF297216 [ tAACCGCATCGCATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCGGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATTCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCAT GGAGAAAGTCAAGCCTATGATTGATGCAGCTGGTGATGCT GGTGTTAATATTTTGTGTTTACA GGAAGCTTGGACAATGCCTTTTGCCTTCTGCACACGTGA AAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGGAGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATA ]
[+] EMBL CB658898 [ CAGCCCTCAGACGAGAGGATGGACAGCAGCAACGGCGAGCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCCGGGTCGATCGGAGGGTACGAGTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCGGCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAAAGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATTCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCAT GGAAAAAGTCAAGCCTATGATTGATGCAGCTGGTGATGCT GGTGTTAATATTTTGTGTTTACA GGAAGCTTGGACAATGCCTTTTGCCTTCTGCACACGTGAGAAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGGAGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATATAACATGGTAATTGTGAGCCCAATCCTCGAAAGAGATGTAAACCACGGAGAGATTGTATGGAATACAGCTGTTGTCATAGGTAATCATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATATGGGGAAAATCGGAGT AACATTTGTTA ]
[+] EMBL C73573 [ GTGCTCTAGAGGCCATCTCATTGCCCGAAGCCACANCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGANAAAGAGTATCTNAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTATNCCTACCACCAGTNATTTTGCAGATCAGAAGAAGGCTATTATGGGAGAAAGTTAAGCCTATGATTNATGCAGCNGGTGATGCTGGGTGTNAATATTTTGTGTTTACAGGGAAGCTTGGACAATGCC TTTGCCTTCTGCACACGTTANAAAA ]
[-] EMBL CB658899 [ GGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATT GAGGCCAG AAATGCT GCAATTGCAAATAGCTACTTT GTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTT CCCAAA CCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCACAGTTCATTAACAAGTT ]
[+] EMBL AU094470 [ ggcCCCATTGGAGGCCAGAAAATGCTGGCAATNGCAAATAGCTACTTTGGTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTTCCCCAAACCCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCAaaaa ]
[-] EMBL CF297215 [ ACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCACAaaaaa ]
[-] EMBL CF325867 [ AAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATAATCATTTTGCTTTCTGCTGTAAATTTGCAAGG TATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATATTAATGATTTAGCCCAAAAATTTATATCACAGTTCAAAAAAAAAAAAAAAAAACTC]
[+] EMBL CA764657 [ AAACATTAATACTCATTTTGCTTTCTGCTGTAAATTTGCAAGGTTGTGTATGATCTGTAAAGATAATGCACACCAAACCATATGCCATAGTAATGGTTT ]
consensusID : consensus_14714#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1147 fasta sequence
[GAAGATAGCGCTGTTTTTGGACTACGACGGTACACTGTCGCCAATTGTCGATGAACCTGACAATGCTATCATGTCTGACCAGATGCGCGAGGTGGTGAGGAATGCTGCCTTGCATCTACCCACTGCGATTATCAGTGGAAGGTCTCGTGATAAGGTGTTTGATTTTGTTAAACTAACAGAATTGTACTATGCTGGTAGCCATGGAATGGACATCATGGGTCCAGTTGGGGAACATGATTCAGTTACTAACCATAGGAGCTCCATTAACTCAAATAGAAAGCAGGGCAAGGGAGTGAAGATCTTCCAGGCTGGTACTGAATTCTTACCAATGATCAATGAGGTTTTTAGATTGCTCATCGATAAGACAAAGGCAATCGACGGTGTGAAAATTGAGAACAACAAGTTCTGTGTATCGGTGCACTACCGCAATGTTGAGGAGAAGAATTGGCAACTTGTTTCTCAATGCACAAATGATGTCCTAAAAGTCTACCCTCGCCTCCGATTGACTCATGGACGAAAAGTTTTGGAAATTCGTCCAGTGATAGACTGGAACAAGGGGAAGGCTGTGGAGTTCTTGCTGGACTCCCTAGATCTAGCTAGCTGTAAAAATGTTCTCCCTATTTACATCGGGGATGATTGTACCGACGAGGATGCTTTTAAGGTTCTTCGTGACGATAAAAGGGGTTTCGGGATTCTGGTGTCATCTGTACCAAAGGATTCTCATGCCCTATATTCTCTGATTGATCCATCTGAGGTTATGGAATTCTTGAAAAGACTAGTGATGTGGAAGAACGAAGAAGCATCACATAATAAGTAGATTATAAATATATCTGATGTTTACTCTAGGGTAGATTTCTGAATTCTGACAAAGAGAATAAGCAGAAGGGCAACAGAATTAACTTGGACATAGTGGACAGTTGTACATCATATAGTTAATCCATTTTCTTAGCCTAGCAAGTGGCAAAATAAAAGTAATTGCCATGTTGTACAAGAATGCGAAGCATTCTGCACAAGTCCAGTTCTTTGAATAATGGTCTCAGTTGTAGAATGGTGTAACTTGTTAATGAACTGTGATATAAATTTTTGGGCTAAACCATTACTATGGCATATGGTTTGGTGTGCATTATCTTTAAAAAAAAAAAAAAAA]
[+] EMBL AK070085 [GAAGATAGCGCTGTTTTTGGACTACGACGGTACACTGTCGCCAATTGTCGATGAACCTGACAATGCTATCATGTCTGACCAGATGCGCGAGGTGGTGAGGAATGCTGCCTTGCATCTACCCACTGCGATTATCAGTGGAAGGTCTCGTGATAAGGTGTTTGATTTTGTTAAACTAACAGAATTGTACTATGCTGGTAGCCATGGAATGGACATCATGGGTCCAGTTGGGGAACATGATTCAGTTACTAACCATAGGAGCTCCATTAACTCAAATAGAAAGCAGGGCAAGGGAGTGAAGATCTTCCAGGCTGGTACTGAATTCTTACCAATGATCAATGAGGTTTTTAGATTGCTCATCGATAAGACAAAGGCAATCGACGGTGTGAAAATTGAGAACAACAAGTTCTGTGTATCGGTGCACTACCGCAATGTTGAGGAGAAGAATTGGCAACTTGTTTCTCAATGCACAAATGATGTCCTAAAAGTCTACCCTCGCCTCCGATTGACTCATGGACGAAAAGTTTTGGAAATTCGTCCAGTGATAGACTGGAACAAGGGGAAGGCTGTGGAGTTCTTGCTGGACTCCCTAGATCTAGCTAGCTGTAAAAATGTTCTCCCTATTTACATCGGGGATGATTGTACCGACGAGGATGCTTTTAAGGTTCTTCGTGACGATAAAAGGGGTTTCGGGATTCTGGTGTCATCTGTACCAAAGGATTCTCATGCCCTATATTCTCTGATTGATCCATCTGAGGTTATGGAATTCTTGAAAAGACTAGTGATGTGGAAGAACGAAGAAGCATCACATAATAAGTAGATTATAAATATATCTGATGTTTACTCTAGGGTAGATTTCTGAATTCTGACAAAGAGAATAAGCAGAAGGGCAACAGAATTAACTTGGACATAGTGGACAGTTGTACATCATATAGTTAATCCATTTTCTTAGCCTAGCAAGTGGCAAAATAAAAGTAATTGCCATGTTGTACAAGAATGCGAAGCATTCTGCACAAGTCCAGTTCTTTGAATAATGGTCTCAGTTGTAGAATGGTGTAACTTGTTAATGAACTGTGATATAAA ]
[-] EMBL CA763265 [ ggccgagACAAGGGGAAGGCTGTGGAGTTCTTGCTGGACTCCCTAGATCTAGCTAACTGTAAAAATGTTCTCCCTATTTACATCGGGGACGATCGTACCGACGAGGACGCTTTTAAGGTTCTTCGTGACGATAAAAGGGGTTTCGGGATTCTGGTGTCATCTGTACCAAAAGATTCTCATGCCCTGTATTCTCTGATTGATCCATCTGAGGTTATGGAATTCTTGAAAAGACTAGTTATGTGGAAGAAGGAAGAAGCCTCCCATAATAAGTAGATTATAAATATCTCTGATGTTTACTCTAGGGTAGATTTTTGAGTTCTGACAAAGAGAATAAGCAGAAGGGCAACAGAATTAACTTGGACATAGTGGACAGTTGTACATCATATAGTTAATCCATTTTCTTAGCCTGGCAAGTGGCAAAATAAAAGTAATTGCCATGTTGTACAAGAATGCGAAGCATTCTGCAAAAGTCCAGTTCTTTGAATAATGGTCCCAGTTGTAGAATGGTGTAACTTGTTAATGAACTGTGATATAAATTTTTGGGCTAAACCATTACTATGGCATATGGTTTGGTGTGCATTATCTTTAAAAAAAAAAAAAAAA]
consensusID : consensus_14714#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 854 fasta sequence
[CATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATATGGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATTGAGGCCAGAAATGCTGCAATTGCAAATAGCTACTTTGTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTTCCCAAACCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAA--CTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTTCTTAGGGTTGGAAACATTGATACTCATTTTGCTTTCAAC-CTAAAAGGAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB672759 [CATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTTCAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATATGGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTTTGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGAACCAATGTGGCCCATTGAGGCCAGAAATGCTGCAATTGCAAATAGCTACTTTGTCGGGTCAATTAACCGGGTTGGCACAGAGGTCTTCCCAAACCCATTCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAA CTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTTCTTAGGGTTGGAAACATTGATACTCATTTTGCTTTCAAC CTAAAAGG ]
[+] EMBL CB000874 [ TCACTTCTGGTGACGGGAAACCTCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACT ]
[+] EMBL AU093485 [ CAGCCATTTCTCAGCACCTGATGCTTCTTGCACCCCATCACTATCTCGNTACCGAGATGGCTTGATGATATCTGATATGGACCTCAACTTATGTCGCCAGATCAAAGNCAAGTGGGGCTTCCGCATGACTGCCCGTTATGACNCGTATGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGNCCCCTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTACACATTTAGAGCATTCAGTTTGAGGGAA CTCTTCAAAATCTGCCATTGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAATTTGTATACATGTTTACCTCAAATTGCCTTTTACTTGGAGTTGGAAACATTGATACTCATTTTGCTTTCTGCTGTAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL BU572375 [ CAGATTTTAAACCTCAAGTCATTGTTGACCCCTTGATCAATAAGAGCGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCACTCAATTCTGGAACTTCCACATTTAGAGTATTCAGTTTGAGGGAAGTCTTTTCAAAATCTGCCATT ]
consensusID : consensus_14714#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 200 fasta sequence
[GTGCCAAAGGAGAGCACCTCAATTCTGGGAACTGTTCCACAATTTAGAGTATTCAGTTTGAGGGAAGTCTTTTCAAATCTCCATTGGGGAATCGATTCTTTCAGTTTTCGTATGCAAAGAAAAAATTTGTGTACATGTTTACCTCCAATTGCCTTTACTTGGAGTTGGAAACATTAATACTCATTTGCTTTCTGCTGTAA]
[+] EMBL BI797791 [GTGCCAAAGGAGAGCACCTCAATTCTGGGAACTGTTCCACAATTTAGAGTATTCAGTTTGAGGGAAGTCTTTTCAAATCTCCATTGGGGAATCGATTCTTTCAGTTTTCGTATGCAAAGAAAAAATTTGTGTACATGTTTACCTCCAATTGCCTTTACTTGGAGTTGGAAACATTAATACTCATTTGCTTTCTGCTGTAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14714#0 NCGGCTCTCTAACACGAGCCCAATCACGAGGAGGGCGGGCAAGTGCGGCAACCGCATCGC 60
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ------------------------------------------------------------
consensus_14714#0 ATCACACTAACCGCACCACCGGCAGCCGGCAGTCGAGAGGATGGACAGCAGCAACGGCGA 120
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ------------------------------------------------------------
consensus_14714#0 GCGGCCGCCGCAGGGAGAGGATGCGCCGGCGGCGGCGGCGGGGTCGATCGGAGGGTACGA 180
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ------------------------------------------------------------
consensus_14714#0 GTCCCTGCACAGGCTCCTCCAGTCCAACCTCTCCCCGGAGCTCTTCAAGGAAGCAAGCCG 240
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ------------------------------------------------------------
consensus_14714#0 GCTGCTATTGGGACTGAATTGTGGGCGTGCTCTAGAGGCCATCTCATTGCCCGAAGCCAC 300
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ------------------------------------------------------------
consensus_14714#0 ATCTGCTCTTGCAAAAGCTCATAACTTTGATGTGCAGGCCTTCCGTTTTGATGCAGATAA 360
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ------------------------------------------------------------
consensus_14714#0 AGAGTATCTCAGGCAACCACGGGTTATTCGAGTTGGCCTGATTCAGAACTCAATTGCTAT 420
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ------------------------------------------------------------
consensus_14714#0 TCCTACCACCAGTCATTTTGCAGATCAGAAGAAGGCTATCATGGAGAAAGTCAAGCCTAT 480
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ------------------------------------------------------GAAGAT 6
consensus_14714#0 GATTGATGCAGCTGGTGATGCTGGTGTTAATATTTTGTGTTTACAGGAAGCTTGGACAAT 540
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 AGCGCTGTTTTTGGACTACGACGGTACACTGTCGCCAATTGTCGATGAACCTGACAATGC 66
consensus_14714#0 GCCTTTTGCCTTCTGCACACGTGAGAAAAGGTGGTGTGAGTTTGCTGAGCCTGTTGATGG 600
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 TATCATGTCTGACCAGATGCGCGAGGTGGTGAGGAATGCTGCCTTGCATCTACCCACTGC 126
consensus_14714#0 AGAATCTACTCAATTTCTTCAACAACTTGCTAAGAAATATAACATGGTAATTGTGAGCCC 660
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 GATTATCAGTGGAAGGTCTCGTGATAAGGTGTTTGATTTTGTTAAACTAACAGAATTGTA 186
consensus_14714#0 AATCCTCGAAAGAGATGTAAACCACGGAGAGATTGTATGGAATACAGCTGTTGTCATAGG 720
consensus_14714#2 ------------------------------------------------------------
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 CTATGCTGGTAGCCATGGAATGGACATCATGGGTCCAGTTGGGGAACATGATTCAGTTAC 246
consensus_14714#0 TAATCATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTT 780
consensus_14714#2 ----CATGGGAACATAATTGGTATACATCGAAAGAATCACATCCCAAGAGTCGGTGATTT 56
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 TAACCATAGGAGCTCCATTAACTCAAATAGAAAGCAGGGCAAGG-GAGTGAAGATCTTCC 305
consensus_14714#0 CAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATA 840
consensus_14714#2 CAATGAGAGCACATACTATATGGAGGGTAACACTGGGCATCCAGTGTTTGAAACAGCATA 116
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 AGGCTGGTACTGAATTCTTACCAATGATCAATGAGGTTTTTAGATTGCTCATCGATAAGA 365
consensus_14714#0 TGGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTT 900
consensus_14714#2 TGGGAAAATCGGAGTAAACATTTGTTATGGAAGGCATCATCCCCTTAATTGGCTTGCTTT 176
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 CAAAGGCAATCGACGGTGTGAAAATTGAGAACAACAAGTTCTGTGTATCGGTGCACTACC 425
consensus_14714#0 TGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGA 960
consensus_14714#2 TGGCCTCAATGGAGCTGAAATAGTATTCAACCCATCCGCAACTGTTGGTGAACTCAGTGA 236
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 GCAATGTTGAGGAGAAGAATTGGCAACTTGTTTCTCAATGCACAAATGATGTCCTAAAAG 485
consensus_14714#0 ACCAATGTGGCCCATTGAGGCCAGAAATGCTGCAATTGCAAATAGCTACTTTGTCGGGTC 1020
consensus_14714#2 ACCAATGTGGCCCATTGAGGCCAGAAATGCTGCAATTGCAAATAGCTACTTTGTCGGGTC 296
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 TCTACCCTCGCCTCCGATTGACTCATGGACGAAAAGTTTTGGAAATTCGTCCAGTGATAG 545
consensus_14714#0 AATTAACCGGGTTGGCACAGAGGTCTTCCCAAACCCATTCACTTCTGGTGACGGGAAACC 1080
consensus_14714#2 AATTAACCGGGTTGGCACAGAGGTCTTCCCAAACCCATTCACTTCTGGTGACGGGAAACC 356
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 ACTGGAACAAGGGGAAGGCTGTGGAGTTCTTGCTGGACTCCCTAGATCTAGCTAGCTGTA 605
consensus_14714#0 TCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTC 1140
consensus_14714#2 TCAGCATGCCGACTTTGGTCATTTCTATGGATCCAGCCATTTCTCAGCACCTGATGCTTC 416
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 AAAATGTTCTCCCTATTTACATCGGGGATGATTGTACCGACGAGGATGCTTTTAAGGTTC 665
consensus_14714#0 TTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAA 1200
consensus_14714#2 TTGCACCCCATCACTATCTCGCTACCGAGATGGCTTGATGATATCTGATATGGACCTCAA 476
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 TTCGTGACGATAAAAGGGGTTTCGGGATTCTGGTGTCATC-TGTACCAAAGGATTCTCAT 724
consensus_14714#0 CTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTA 1260
consensus_14714#2 CTTATGTCGCCAGATCAAAGACAAGTGGGGCTTCCGCATGACTGCCCGTTATGACACGTA 536
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 GCCCTATATTCTCTGATTGATCCATCTGAGGTTATGGAATTCTTGAAAAGACTAGTGATG 784
consensus_14714#0 TGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCC 1320
consensus_14714#2 TGCTTCCTTGCTTTCAGAGTACTTGAAGCCAGATTTTAAACCTCAAGTCATTGTTGACCC 596
consensus_14714#3 ------------------------------------------------------------
consensus_14714#1 TGGAAGAACGAAGAAGCATCACATAATAAGTAGATTATAAATATATCTGATGTTTACTCT 844
consensus_14714#0 CTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCAC-TCAATT 1379
consensus_14714#2 CTTGATCAATAAGAGTGCGTAATGGTGAGAAACTTGGTGCCAAAGGAGAGCAC-TCAATT 655
consensus_14714#3 ------------------------------------GTGCCAAAGGAGAGCACCTCAATT 24
consensus_14714#1 AGGGTAGATTTCTGAATTCTGACAAAGAGAAT----AAGCAGAAGGGCAACAGAATTAAC 900
** **** * ** *
consensus_14714#0 CTGGAACTTACAC----ATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCAT 1435
consensus_14714#2 CTGGAACTTACAC----ATTTAGAGCATTCAGTTTGAGGGAACTCTTCAAAATCTGCCAT 711
consensus_14714#3 CTGGGAACTGTTCCACAATTTAGAGTATTCAGTTTGAGGGAAGTCTTTTCAAATCTCCAT 84
consensus_14714#1 TTGGACATAGTGGACAGTTGTACATCATATAGTT--AATCCATTTTCTTAGCCTAGCAAG 958
*** * ** * ** **** * * * * * *
consensus_14714#0 TGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAA-TTTGTATACATGTTT 1494
consensus_14714#2 TGGGGAATCGATTTCTTTTTTCAATTTTCGTATGTAAAGAAAAA-TTTGTATACATGTTT 770
consensus_14714#3 TGGGGAATCGAT----TCTTTCAGTTTTCGTATGCAAAGAAAAAATTTGTGTACATGTTT 140
consensus_14714#1 TGGCAAAATAAAAGTAATTGCCATGTTGTACAAG-AATGCGAAGCATTCTGCACAAGTCC 1017
*** ** * * ** ** * * ** * ** ** * *** **
consensus_14714#0 ACCTCAAATTGCCTTTTACTTGGAGTTGGA-AACATTGATACTCATTTT-GCTTTCTGCT 1552
consensus_14714#2 ACCTCAAATTGCCTTTTTCTTAGGGTTGGA-AACATTGATACTCATTTT-GCTTTC---- 824
consensus_14714#3 ACCTCCAATTGCCTTT-ACTTGGAGTTGGA-AACATTAATACTCATTT--GCTTTCTGCT 196
consensus_14714#1 AGTTCT--TTGAATAATGGTCTCAGTTGTAGAATGGTGTAACTTGTTAATGAACTGTGAT 1075
* ** *** * * **** * ** * *** ** * *
consensus_14714#0 GTAAATTTGCAAGGTATGTATGATCTGTAAAGATAATGCACACCAAACAATATGCCATAT 1612
consensus_14714#2 ---AACCTAAAAGGAAAAAAAAAAAAAAAAAAA--------------------------- 854
consensus_14714#3 GTAA-------------------------------------------------------- 200
consensus_14714#1 ATAAATTTTTGGGCTAAACCATTACTATGGCATATGGTTTGGTGTGCATTATCTTTAAAA 1135
*
consensus_14714#0 TAATGATTTAGCCCAAAAATTTATATCACAGTTCATTAACAAGTTAAAAAAACTC 1667
consensus_14714#2 -------------------------------------------------------
consensus_14714#3 -------------------------------------------------------
consensus_14714#1 AAAAAAAAAAAA------------------------------------------- 1147
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||