These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14729#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1833 fasta sequence [GGTCTGGGAAGTACTCCATCTACAGGGAGATTGATGATGACGATTTTGAGGAATCTGATGATGATTCTGAAGAGAGGAATACCTCATCTCTGCCTGAAGAAGGGGAAATAGGAGAATTTGAAGATGAAGAGGACAATGATGATTCAGTGCCTGATAATAAGGATCAATCAGAGGAAGAAGAGCCTATCAATGATGAAGGGTATGATTTTTCACATGGGATGGGACGCAGAAAAGCCCATAGATCTGAAGAAGCTGGTTCAACAGGATCTTCATCTGGTGGCCGTAGATTGCCACCACCTGCACCTTCCTCCTCTTCAAAAAAATTGCGGTCTTTGTCTGCATTAGATTCCCGCCCGGGTGCTTTGTCAAAGAGAACTGCAGATGACCTAGAGGAAGGAGAAATTGCATTATCAGGGGATTCACATCTGGATCTCCAGCAGTCAGGCAGCTGGAATCATGAACGAGATGATGGTGAGGATGAACAGGTAGTACAGCCAAAAATAAAGCGCAAGCGGAGTATCCGTATTCGTCCAAGACCTAATGCAGAAAAACTGGATGATAGATCCGGTGATGGGACCGTCCCTCAACGTGGTGTTCATCTTGCATTTCAAGGAGATGGTGATTATGATTCACAATTTAAGTCTGAGCAAGCCTTTGCTGATCCTGCTTCCAGGCAGCAAGACACAGTTCATCGGACAGTAAAACAAAAGCGTAACATGCCATCTAGAAAGGCTCCCCCTGCCACTAAGGCTGGGAAAATGACTCAGCTGTCTGGATCTGGTGAGGGATCTGCTGAACATTCTAAGGAAAATTGGAGTAACAAG-GTGATAGA-ATCT-GCTGGTCCAAATTCAAGTGGAACAAAGATGTCTGACAGTATGCAAAGAAAGTGCAAGAACGTGATAAACAAGCTTTGGAGGAGGATTGACAAAGA-GGGTCATCAAATCATACCAAATATATCTTCTTGGTGGCGTAGGAACGAGAATTCCTCATTCAAAGGTTTGGCTAGCAGCACC-CTTGATCTACAGAAAATTGAACAACGAGTTGATGGATTTGAGTATGGCGGTGTGAATGAATTCATAGCTGACATGCAGCAGATGCTGAAAAGTGTGGTTCAACATTTCAGCTATAGGCATGAGGTCCGAGTAGAAGCTGAGACCCTCCACAACTTATTTTTCAATATAATGAAGATTGCCTTTCCGGACTCAGACTTCAGAGAAGCTAAGGGTGCTATGTCATTTTCGAATCCTGGAGGAGGTGCAAGTGGCTCTGCTGCGCAATCAACAAAGCAATCTGCTTCAGGCCAGAAACGTCGTTCAAGCACCAGTGAAGCGGAGCAGCATGGTTCAAGCACTAGCAGACACAATCAGCATGCACCAGTTGGTGAGGTTTCAGGCCGGGCCCACACTTCAAAATCTGAGAAGGACTCCCGGCATTCTGGACCAGGTAGCAGGGAACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCT-CCCGACC-ACGCCGGGCGGATGGGACCGGCGCCACAACCTA-AAGTGCCAGGACGCCC-TCC-AAGAGAACC-CACCCTTCT-AGCA-TCT-TGCATTCA-CT-GATGGGG-GCTTATT-TTTGCA-CATTC-GACC---GGGGGA-TTC-TTACCC-GC-TTTGA-AC-TTCA--GGGCTAACCTCAAAATCAGCCTTTTTGGAAGCCGCCACCCTTTCAAAAAAGAGGTTGTTTTTTGGTGGGGGTAATCTTCCCTCAATTTTACCTCCCCCGTATTTGAC] [+] EMBL CB661341 [GGTCTGGGAAGTACTCCATCTACAGGGAGATTGATGATGACGATTTTGAGGAATCTGATGATGATTCTGAAGAGAGGAATACCTCATCTCTGCCTGAAGAAGGGGAAATAGGAGAATTTGAAGATGAAGAGGACAATGATGATTCAGTGCCTGATAATAAGGATCAATCAGAGGAAGAAGAGCCTATCAATGATGAAGGGTATGATTTTTCACATGGGATGGGACGCAGAAAAGCCCATAGATCTGAAGAAGCTGGTTCAACAGGATCTTCATCTGGTGGCCGTAGATTGCCACCACCTGCACCTTCCTCCTCTTCAAAAAAATTGCGGTCTTTGTCTGCATTAGATTCCCGCCCGGGTGCTTTGTCAAAGAGAACTGCAGATGACCTAGAGGAAGGAGAAATTGCATTATCAGGGGATTCACATCTGGATCTCCAGCAGTCAGGCAGCTGGAATCATGAACGAGATGATGGTGAGGATGAACAGGTAGTACAGCCAAAAATAAAGCGCAAGCGGAGTATCCGTATTCGTCCAAGACCTAATGCAGAAAAACTGGATGATAGATCCGGTGATGGGACCGTCCCTCAACGTGGTGTTCATCTTGCATTTCAAGGAGATGGTGATTATGATTCACAATTTAAGTCTGAGCAAGCCTTTGCTGATCCTGCTTCCAGGCAGCAAGACACAGTTCATCGGACAGTAAAACAAAAGCGTAACATGCCATCTAGAAAGGCTCCCCCTGCCACTAAGGCTGGGAAAATGACTCAGCTGTCTGGATCTGGTGAGGGATCTGCTGAACATTCT ] [+] EMBL CB677034 [ AGAGCCATTCCTCATCTCTGCCTGAAGAAGGGGAAATAGGAGAATTTGAAGATGAAGAGGACAATGATGATTCAGTGCCTGATAATAAGGATCAATCAGAGGAAGAAGAGCCTATCAATGATGAAGGGTATGATTTTTCACATGGGATGGGACGCAGAAAAGCCCATAGATCTGAAGAAGCTGGTTCAACAGGATCTTCATCTGGTGGCCGTAGATTGCCACCACCTGCACCTTCCTCCTCTTCAAAAAAATTGCGGTCTTTGTCTGCATTAGATTCCCGCCCGGGTGCTTTGTCAAAGAGAACTGCAGATGACCTACAGGAAGGAGAAATTGCATTATCAGGGGATTCACATCTGGATCTCCAGCAGTCAGGCAGCTGGAATCATGAACGAGATGATGGTGAGGATGAACAGTTAGTACAGCCAAAAATAAAGCGCAAGCGGAGTATCCGTATTCGTCCAAGACCTAATGCAGAAAAACTGGATGATAGATCCGGTGATGGGACCGTCCCTCAACGTGGTGTTCATCTTGCATTTCAAGGAGATGGTGATTATGATTCACAATTTAAGTCTGAGCAAGCCTTTGCTGATCCTGCTTCCAGGCAGCAAGACACAGTTCATCGGACAGTAAAACAAAAGCGTAACATGCCATCTAGAAAGGCTCCCCCTGCCACTAAGGCTGGGAAAATGACTCAGCTGTCTGGATCTGGTGAGGGATCTGCTGAACATTCTAAAGAAAATTGGAGTAACAAG GTGA ] [+] EMBL CB673979 [ ATCTCTGCCTGAAGAAGGGGAAATAGGAGAATTTGAAGATGAAGAGGACAATGATGATTCAGTGCCTGATAATAAGGATCAATCAGAGGAAGAAGAGCCTATCAATGATGAAGGGTATGATTTTTCACATGGGATGGGACGCAGAAAAGCCCATAGATCTGAAGAAGCTGGTTCAACAGGATCTTCATCTGGTGGCCGTAGATTGCCACCACCTGCACCTTCCTCCTCTTCAAAAAAATTGCGGTCTTTGTCTGCATTAGATTCCCGCCCGGGTGCTTTGTCAAAGAGAACTGCAGATGACCTAGAGGAAGGAGAAATTGCATTATCAGGGGATTCACATCTGGATCTCCAGCAGTCAGGCAGCTGGAATCATGAACGAGATGATGGTGAGGATGAACAGGTAGTACAGCCAAAAATAAAGCGCAAGCGGAGTATCCGTATTCGTCCAAGACCTAATGCAGAAAAACTGGATGATAGATCCGGTGATGGGACCGTCCCTCAACGTGGTGTTCATCTTGCATTTCAAGGAGATGGTGATTATGATTCACAATTTAAGTCTGAGCAAGCCTTTGCTGATCCTGCTTCCAGGCAGCAAGACACAGTTCATCGGACAGTAAAACAAAAGCGTAACATGCCATCTAGAAAGGCTCCCCCTGCCACTAAGGCTGGGAAAATGACTCAGCTGTCTGGATCTGGTGAGGGATCTGCTGAACATTCTAAGGAAAATTGGAGTAACAAG GTGATAGA ATCT GCTGGTCCAAATTCAAGTGGAACAAAGATGT ] [+] EMBL CB675709 [ GATGATAGATCCGGTGATGGGACCGTCCCTCAACGTGGTGTTCATCTTGCATTTCAAGGAGATGGTGATTATGATTCACAATTTAAGTCTGAGCAAGCCTTTGCTGATCCTGCTTCCAGGCAGCAAGACACAGTTCATCGGACAGTAAAACAAAAGCGTAACATGCCATCTAGAAAGGCTCCCCCTGCCACTAAGGCTGGGAAAATGACTCAGCTGTCTGGATCTGGTGAGGGATCTGCTGAACATTCTAAGGAAAATTGGAGTAACAAG GTGATAGA ATCT GCTGGTCCAAATTCAAGTGGAACAAAGATGTCTGACAGTATGCAAAGAAAGTGCAAGAACGTGATAAACAAGCTTTGGAGGAGGATTGACAAAGA GGGTCATCAAATCATACCAAATATATCTTCTTGGTGGCGTAGGAACGAGAATTCCTCATTCAAAGGTTTGGCTAGCAGCACC CTTGATCTACAGAAAATTGAACAACGAGTTGATGGATTTGAGTATGGCGGTGTGAATGAATTCATAGCTGACATGCAGCAGATGCTGAAAAGTGTGGTTCAACATTTCAGCTATAGGCATGAGGTCCGAGTAGAAGCTGAGACCCTCCACAACTTATTTTTCAATATAATGAAGATTGCCTTTCCGGACTCAGACTTCAGAGAAGCTAAGGGTGCTATGTCATTTTCGAATCCTGGAGGAGGTGCAAGTGGCTCTGCTGCGCAATCAACAAAGCAATCTGCTTCANGCCAGAAACGTC ] [+] EMBL CB682510 [ AAGGCTGGGAAAATGACTCAACTGTCTGGATCTGGTGAGGGATCTGCTGAACATTCTAAGGAAAATTGGAGTAACAAGCGTGATAGACATCTCGCTGGACCAAATTCAAGTGGAACAAAGATGTCTGACAGAATGCAAAGAAAGTGCAAAAACGTGATAAACAAGCTTTGGAGGAGGATTGACAAAGACGGGTCATCAAATCATACCAAATATATCTTCTTGGTGGCGTAGGAACGAGAATTCCTCATTCAAAGGTTTGGCTAGCAGCACC CTTGATCTACAGAAAATTGAACAACGAGTTGATGGATTTGAGTATGGAGGTGTGAATGAATTCATATCTGACATGCAGCACATGCTGAAAAGTGCGGCTCAACATTTCAGCTATAGGCATGAGGTCCGAGTACAAGCTGAGACCCTCCACAACTTATTTTTCAATATAATGAAGATTGCCTTTCCGGACTCAGACTTCATACAACCTAAAGGTGCTATGTCATTTTCAAATCCTGCACGACGTGCAAGTGGCTCTGCTGCGCAATCAACAAAGCA ] [+] EMBL BE039765 [ AGTGGAACAAAGATGTCTGACAGTATGCAAAGAAAGTGCAAGAACGTGATAAACAAGCTTTGGAGGAGGATTGACAAAGA GGGTCATCAAATCATACCAAATATATCTTCTTGGTGGCGTAGGAACGAGAATTCCTCATTCAAAGGTTTGGCTAGCAGCACC CTTGATCTACAGAAAATTGAACAACGAGTTGATGGATTTGAGTATGGCGGTGTGAATGAATTCATAGCTGACATGCAGCAGATGCTGAAAAGTGTGGTTCAACATTTCAGCTATAGGCATGAGGTCCGAGTAGAAGCTGAGACCCTCCACAACTTATTTTTCAATATAATGAAGATTGCCTTTCCGGACTCAGACTTCAGAGAAGCTAAGGGTGCTATGTCATTTTCGAATCCTGGAGGAGGTGCAAGTGGCTCTGCTGCGCAATCAACAAAGCAATCTGCTTCAGGCCAGAAACGTCGTTCAAGCACCAGTGAAGCGGAGCAGCATGGTTCAAGCACTAGCAGACACAATCAGCATGCACCAGTTGGTGAGGTTTCAGGCCGGGCCCACACTTCAAAATCTGAGAAGGACTTCCGGCATTCTGGACCAGGTAGCAAGGAACAGTTCACGGATAGCGCAAGGTTGTTCAGGCACCCTACAGATATGTTCATAGTTTAGAAGAAGAGAGATCGAAGGCCCACCCTGGGGTC CCATCCAGTTCAGGCCGAACTGGACCGCTCT CCCGACC ACGCCGGGCGGATGGGACCGGCGCCACAACCTA AAGTGCCAGGACGCCC TCC AAGAGAACC CACCCTTCT AGCA TCT TGCATTCA CT GATGGGG GCTTATT TTTGCA CATTC GACC GGGGGA TTC TTACCC GC TTTGA AC TTCA GGGCTAACCTCAAAATCAGCCTTTTTGGAAGCCGCCACCCTTTCAAAAAAGAGGTTGTTTTTTGGTGGGGGTAATCTTCCCTCAATTTTACCTCCCCCGTATTTGAC] [+] EMBL CB678443 [ CAAAGA CCTTCATAAAATCATACCAAATATATCTTCTTGGTGGCGTAGGAACGAGAATTCCTCATTCAAAGGTTTGGCTAGCAGCACC CTTGATCTACAGAAAATTGAACAACGAGTTGATGGATTTGAGTATGGCGGTGTGAATGAATTCATAGCTGACATGCAGCAGATGCTGAAAAGTGTGGTTCAACATTTCAGCTATAGGCATGAGGTCCGAGTAGAAGCTGAGACCCTCCACAACTTATTTTTCAATATAATGAAGATTGCCTTTCCGGACTCAGACTTCAGAGAAGCTAAGGGTGCTATGTCATTTTCGAATCCTGGAGGAGGTGCAAGTGGCTCTGCTGCGCAATCAACAAAGCAATCTGCTTCAGGCCAGAAACGTCGTTCAAGCACCAGTGAAGCGGAGCAGCATGGTTCAAGCACTAGCAGACACAATCAGCATGCACCAGTTGGTGAGGTTTCAGGCCGGGCCCACACTTCAAAATCTGAGAAGGACTCCCGGCATTCTGGACCAGGTAGCAGGGAACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCT CCCcg ] [+] EMBL CB652757 [ CTCATTCCAAGGTTTGGCTAGCAGCACCTCTTGATCTACAGAAAATTGAACAACGAGTTGATGGATTTGAGTATGGCGGTGTGAATGAATTCATAGCTGACATGCAGCAGATGCTGAAAAGTGTGGTTCAACATTTCAGCTATAGGCATGAGGTCCGAGTAGAAGCTGAGACCCTCCACAACTTATTTTTCAATATAATGAAGATTGCCTTTCCGGACTCAGACTTCAGAGAAGCTAAGGGTGCTATGTCATTTTCGAATCCTGGAGGAGGTGCAAGTGGCTCTGCTGCGCAATCAACAAAGCAATCTGCTTCAGGCCAGAAACGTCGTTCAAGCACCAGTGAAGCGGAGCAGCATGGTTCAAGCACTAGCAGACACAATCAGCATGCACCAGTTGGTGAGGTTTCAGGCCGGGCCCACACTTCAAAATCTGAGAAGGACTCCCGGCATTCTGGACCAGGTAGCAGGGAACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTCTGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCT ] consensusID : consensus_14729#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 925 fasta sequence [TCAAGCACTAGCAGACACAATCAGCATGCACCAGTTGGTGAGGTTTCAGGCCGGGCCCACACTTCAAAATCTGAGAAGGACTCCCGGCATTCTGGACCAGGTAGCAGGGAACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTC-TGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTCTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACA-TTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAATGAAGCTGAGCCGGTTATAATAG-TGTAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CB661342 [TCAAGCACTAGCAGACACAATCAGCATGCACCAGTTGGTGAGGTTTCAGGCCGGGCCCACACTTCAAAATCTGAGAAGGACTCCCGGCATTCTGGACCAGGTAGCAGGGAACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTC TGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTCTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACA TTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAATGAAGCTGAGCC ] [-] EMBL CB675710 [ CAAGCACTAGCAGACACAATCAGCATGCCCCAGTTGGTGAGGTTTCAGGCCGGGCCCACACTCAAAAATCTGAGAAGGACTCCCGGCATTCTGGACCAGGTAGCAGGGAACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTC TGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTCTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACA TTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAATGAAGCTGAGCCGGTTATAA ] [-] EMBL CB673980 [ AGGGAACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCNTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTC TGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTCTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACA TTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAGGGAAATGAAGCTGAGCCGGTTATAATAG TGT ] [-] EMBL CB682511 [ GGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTC TGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTCTTTGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACA TTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAAGGAAATGAAGCTGACCCGGTTATAATAG TGTAAAAAAAAgg ] [-] EMBL CB677035 [ ATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTC TGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTCTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACA TTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAAGGAAGCTGAGCCGGTTATAATAGTTGTTAAAAAAAAAAAAGAA ] [+] EMBL BI808013 [ GCTCATTCTTGTTCA CAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTCTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACACTTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCC ACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAATGAAGCTGAGCCGGTTATAATA AAAAAAA ] [+] EMBL AU057929 [ ACACCCATTTCTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACA TTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAATGAAGCTGAGCCGGTTATAATAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AT003728 [ TGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAATGAAGCTGAGCCGGTTATAATA AAAAAAAA ] consensusID : consensus_14729#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 779 fasta sequence [AACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTCTGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTTTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACATTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAATGAAGCTGAGCCGGTTATAATAGTTGTATATCTCCATCTCTTT] [-] EMBL CB652758 [AACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATATGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCTCCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGTGCCAGGACGCCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCTCATTCTGTGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACATCCAGTGGGCTAAACCTACCAAGAGATCGAGGACTGATAGTGGCAAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACACCCATTTTTTCGTCGCCATTCCTGCCATCCTTCAAAGAAGTTATCACGACCGTCTGGGACTGACTTGTGTTGTCATGGACATTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTGGTATTTTCTGTAAAGGGCAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCGCTCCATCCAACTGGAGATGTGATGGCGATCTCATGTCATGATGATGTAGTTTAGTAGCCATGGAATGAAATGAAATGAAGCTGAGCCGGTTATAATAGTTGTATATCTCCATCTCTTT] [+] EMBL AA750181 [ AAAAGACGGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTGCGGTGTACATTCCTTAGCACCCTTGAATCTTGATTGACCTCTCTACCCGCTGCTGATTCTGGAGCCCATTGGCCTGGTTTTGACA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14729#1 -----------------------------------------------------TCAAGCA 7 consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 GGTCTGGGAAGTACTCCATCTACAGGGAGATTGATGATGACGATTTTGAGGAATCTGATG 60 consensus_14729#1 CTAGCAGACACAATCAGCATGCACCAGTTGGTGAGGTTTCAGGCCGGGCCCACACTTCAA 67 consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 ATGATTCTGAAGAGAGGAATACCTCATCTCTGCCTGAAGAAGGGGAAATAGGAGAATTTG 120 consensus_14729#1 AATCTGAGAAGGACTCCCGGCATTCTGGACCAGGTAGCAGGGAACAGTTCACGGAT---- 123 consensus_14729#2 ------------------------------------------AACAGTTCACGGAT---- 14 consensus_14729#0 AAGATGAAGAGGACAATGATGATTCAGTGCCTGATAATAAGGATCAATCAGAGGAAGAAG 180 * ** * *** consensus_14729#1 AGCGCAGGGCTGTTCAGGC-----ACCCTACAGATATGTTCATA-GTTAAGAAGAAGAGA 177 consensus_14729#2 AGCGCAGGGCTGTTCAGGC-----ACCCTACAGATATGTTCATA-GTTAAGAAGAAGAGA 68 consensus_14729#0 AGCCTATCAATGATGAAGGGTATGATTTTTCACATGGGATGGGACGCAGAAAAGCCCATA 240 *** * ** * * * * * ** ** * * * * * *** * * consensus_14729#1 GATC---GAAGGCCGAGCC--TGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCT 232 consensus_14729#2 GATC---GAAGGCCGAGCC--TGGGGTCTCCATCCAGTTCAGGCCGAACTGGACCGCTCT 123 consensus_14729#0 GATCTGAAGAAGCTGGTTCAACAGGATCTTCATCTGGTGGCCGTAGATTGCCACCACCTG 300 **** * ** * * ** *** **** ** * ** *** * consensus_14729#1 CCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGT----GCCAGGACG 288 consensus_14729#2 CCCCGACCAACGCCGGGCGGATGGGACCGGCGCCATCACCTAGAGGT----GCCAGGACG 179 consensus_14729#0 CACCTTCCTCCTCTTCAAAAAAATTGCGGTCTTTGTCTGCATTAGATTCCCGCCCGGGTG 360 * ** ** * * * * * * ** * ** * *** ** * consensus_14729#1 CCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCT 348 consensus_14729#2 CCCTTCCAAAGAGATCCACACCCTTCTCAGCAGTCTATGCATTCAGCTGGATGGGGTGCT 239 consensus_14729#0 CTTTGTCAAAGAGAACTGCAGATGACCTAGAGGAAGGAGAAATTGCATTATCAGGGGATT 420 * * ******** * ** * ** * * * * * *** * consensus_14729#1 CAT-TCTG----TGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACA 403 consensus_14729#2 CAT-TCTG----TGCAGCAATCTGATCGTGGGGGGAGTTCATCACCCGGCATTGGAGACA 294 consensus_14729#0 CACATCTGGATCTCCAGCAGTCAGGCAGCTGGAATCATGAACGAGATGATGGTGAGGATG 480 ** **** * ***** ** * * ** * * * * ** ** consensus_14729#1 TCCAGTGGGCTAAACCTA---CCAAG---AGATCGAGGACTGATAGTGGCAAAAGAC--- 454 consensus_14729#2 TCCAGTGGGCTAAACCTA---CCAAG---AGATCGAGGACTGATAGTGGCAAAAGAC--- 345 consensus_14729#0 AACAGGTAGTACAGCCAAAAATAAAGCGCAAGCGGAGTATCCGTATTCGTCCAAGACCTA 540 *** * * ** * *** * *** * ** * * ***** consensus_14729#1 ----GGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTG--CGGT 508 consensus_14729#2 ----GGCCAAGCCATATGTGAAAAAGAAAAGAGGGATTGTTATTCTTGGCATTG--CGGT 399 consensus_14729#0 ATGCAGAAAAACTGGATGATAGATCCGGTGATGGGACCGTCCCTCAACGTGGTGTTCATC 600 * ** * *** * * **** ** ** * ** * consensus_14729#1 GTACATTCCT------TAGCACCCTTGAATCTTGATTGACCTCT---CTACCCGCTGCTG 559 consensus_14729#2 GTACATTCCT------TAGCACCCTTGAATCTTGATTGACCTCT---CTACCCGCTGCTG 450 consensus_14729#0 TTGCATTTCAAGGAGATGGTGATTATGATTCACAATTTAAGTCTGAGCAAGCCTTTGCTG 660 * **** * * * *** ** *** * *** * * ** ***** consensus_14729#1 ATTCTGG------------------AGCCCATTGGCCTG---------GTTTTGACACCC 592 consensus_14729#2 ATTCTGG------------------AGCCCATTGGCCTG---------GTTTTGACACCC 483 consensus_14729#0 ATCCTGCTTCCAGGCAGCAAGACACAGTTCATCGGACAGTAAAACAAAAGCGTAACATGC 720 ** *** ** *** ** * * * *** * consensus_14729#1 ATTTCTTCGTCGCCATTCCTGCCATCCTT-CAAAGAAGTTATCACGACCGTCTGGGACTG 651 consensus_14729#2 ATTTTTTCGTCGCCATTCCTGCCATCCTT-CAAAGAAGTTATCACGACCGTCTGGGACTG 542 consensus_14729#0 CATCTAGAAAGGCTCCCCCTGCCACTAAGGCTGGGAAAATGACTCAGCTGTCTGGATCTG 780 * ** ******* * *** * * * * ****** *** consensus_14729#1 ACTTGTGTTGTCATGGACATTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTG 711 consensus_14729#2 ACTTGTGTTGTCATGGACATTGTGGGAAATGTGGGTAGGAGTAATCGTTCTTGTATGTTG 602 consensus_14729#0 GTGAGGGATCTGCTGAACATTCTAAGGAAAATTGGAGTAACAAGGTGATAGAATCTGCTG 840 * * * * ** ***** * * ** * ** * * * * * ** ** consensus_14729#1 GTATTTTCTGTAAAGGG-CAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCG 770 consensus_14729#2 GTATTTTCTGTAAAGGG-CAAACACATTTAATCTTGTTCTCTGTTGACTGTTAAGTAGCG 661 consensus_14729#0 GTCCAAATTCAAGTGGAACAAAGATGTCTGACAGTATGC---AAAGAAAGTGCAAGAACG 897 ** * * ** **** * * * * * * * ** ** * * ** consensus_14729#1 CTCCATCCAA---CTGGAGATGTGATGGCGA-------TCTCATGTCATGATGA-TGTAG 819 consensus_14729#2 CTCCATCCAA---CTGGAGATGTGATGGCGA-------TCTCATGTCATGATGA-TGTAG 710 consensus_14729#0 TGATAAACAAGCTTTGGAGGAGGATTGACAAAGAGGGTCATCAAATCATACCAAATATAT 957 * *** ***** * ** * * *** **** * * ** consensus_14729#1 TTT---AGTAGCCATGGAATGAAATGAAATGAAGCTGAG--CCGGTTATAATAGT-GTAA 873 consensus_14729#2 TTT---AGTAGCCATGGAATGAAATGAAATGAAGCTGAG--CCGGTTATAATAGTTGTAT 765 consensus_14729#0 CTTCTTGGTGGCGTAGGAACGAGAATTCCTCATTCAAAGGTTTGGCTAGCAGCACCCTTG 1017 ** ** ** **** ** * * * * ** ** ** * * consensus_14729#1 AAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------- 925 consensus_14729#2 ATCTCCATCTCTTT---------------------------------------------- 779 consensus_14729#0 ATCTACAGAAAATTGAACAACGAGTTGATGGATTTGAGTATGGCGGTGTGAATGAATTCA 1077 * * consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 TAGCTGACATGCAGCAGATGCTGAAAAGTGTGGTTCAACATTTCAGCTATAGGCATGAGG 1137 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 TCCGAGTAGAAGCTGAGACCCTCCACAACTTATTTTTCAATATAATGAAGATTGCCTTTC 1197 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 CGGACTCAGACTTCAGAGAAGCTAAGGGTGCTATGTCATTTTCGAATCCTGGAGGAGGTG 1257 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 CAAGTGGCTCTGCTGCGCAATCAACAAAGCAATCTGCTTCAGGCCAGAAACGTCGTTCAA 1317 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 GCACCAGTGAAGCGGAGCAGCATGGTTCAAGCACTAGCAGACACAATCAGCATGCACCAG 1377 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 TTGGTGAGGTTTCAGGCCGGGCCCACACTTCAAAATCTGAGAAGGACTCCCGGCATTCTG 1437 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 GACCAGGTAGCAGGGAACAGTTCACGGATAGCGCAGGGCTGTTCAGGCACCCTACAGATA 1497 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 TGTTCATAGTTAAGAAGAAGAGAGATCGAAGGCCGAGCCTGGGGTCTCCATCCAGTTCAG 1557 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 GCCGAACTGGACCGCTCTCCCGACCACGCCGGGCGGATGGGACCGGCGCCACAACCTAAA 1617 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 GTGCCAGGACGCCCTCCAAGAGAACCCACCCTTCTAGCATCTTGCATTCACTGATGGGGG 1677 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 CTTATTTTTGCACATTCGACCGGGGGATTCTTACCCGCTTTGAACTTCAGGGCTAACCTC 1737 consensus_14729#1 ------------------------------------------------------------ consensus_14729#2 ------------------------------------------------------------ consensus_14729#0 AAAATCAGCCTTTTTGGAAGCCGCCACCCTTTCAAAAAAGAGGTTGTTTTTTGGTGGGGG 1797 consensus_14729#1 ------------------------------------ consensus_14729#2 ------------------------------------ consensus_14729#0 TAATCTTCCCTCAATTTTACCTCCCCCGTATTTGAC 1833 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||