cluster # 14755

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 14755 cluster # 14755 Sequences # 18 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14755#0 length = 1399 sequences # 17

consensus_14755#1 length = 317 sequences # 1

consensusID : consensus_14755#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1399
fasta sequence

                              [TGGCCGTGCAGTGCAGTGAAGCCCGCGCCGCGCCGTTTCACGGGTCCACGACGCCGCCTGGTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCGCGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGACGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGAGGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGAAGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA-CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC-TTTGGAATGTG-AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT-CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC-TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCAAAAAAAAATGAGCTTTGGAGCCAACTGAATTTGATGCAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCCAATGATGAAATGTTAACGCG]

[+] EMBL AK073131             [TGGCCGTGCAGTGCAGTGAAGCCCGCGCCGCGCCGTTTCACGGGTCCACGACGCCGCCTGGTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCGCGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGACGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGAGGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGAAGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGAC                                                                                                                                                                                                                                    ]
[+] EMBL CB620469             [                                   TTTCACTGGTCCACGACGCCGCCTGGTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCGCGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGACGAGGATCCGGGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGAGGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGAAGGTTGTGAAGCCAGCCAGGAGAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCTGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCGTGGTGCAAAGATTCAATTGGCATAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCATGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCTTTAATGAAGCTATTTATAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATCTTTTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB655683             [                                               ACGACGCCGCCTGGTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCGCGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGACGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGAGGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGAAGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTGAAACCGGTTC ACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB964497             [                                                                                                                                                                                                                                                                                                                                           ggaatagctGCGGTCGCAGGTAGATCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAACAAAAA AAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB966018             [                                                                                                                                                                                                                                                                                                                                                                   TCAGGCGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCGCGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAAAAA AAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB655684             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCT                                                                                                                                           ]
[+] EMBL AI978538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACTGAGAAGGAATCGCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGNNNCAAGACNNNGNCNNNAAGCCTTCGTAC TCTAATTTGGATTGANGCACTGACATGnnnt                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB620470             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCAGATTGAATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTTTTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACGGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTT                                                                                                                                                                               ]
[+] EMBL CB675791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCACTGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCTCTGTGGTTTGAGCTTTGGAGCCAACTGAATTTGATGCAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCCA                   ]
[-] EMBL CB675792             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAGATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCTCTGTGGTTTGAGCTTTGGAGCCAACTGAATTTGATGCAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCCAATGATGAAATGTTAACGCG]
[+] EMBL AU095630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTG                                                                                                                                                                                                                                                                ]
[+] EMBL AU056030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGG                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU056032             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAACCAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCTCCTC CTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCAAAAAAAAA                                                                                                           ]
[+] EMBL AU030116             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAA CAGAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATC TTTGGAATGTG AACCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGTCTGCATACGCTACAGCT CTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTACNCCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU056031             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTCTGCATNCGCTACAGCTGCTC CTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGGCAGTAACCGAGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATNCGGGTGTCATAATNCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGACCTAAAGATTGACGTTCAAAAAAAAA                                                                                                           ]
[-] EMBL AI978539             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             acnnTCCTACTGACGAGTTCTTGAAGGCAGNNNNNNNGGCAAGACTAAGACTCCAAGCCTTCGTAC TCTAATTTGGATTGAAGCACTGACATGCCCTGTACTACCTGAAGGAGTAGCTCTTTTTTGATGGGCCATCATGTGTTATGCGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAGATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCNACTGAGCTTGTTATTGTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGG                                                                                                                                                           ]
[+] EMBL AU166197             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTATGACCGAACATNTGAACATCTTAGTAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCTGAACGANCTAAAGATTGATGTTCAAAAAAAAA                                                                                                           ]




>consensus_14755#0
TGGCCGTGCAGTGCAGTGAAGCCCGCGCCGCGCCGTTTCACGGGTCCACGACGCCGCCTG
GTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCG
CGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGA
CGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGA
GGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGA
AGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGG
CGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGA
AGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCG
CGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTG
AATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCAC
TGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTACAAAAGTCGAAGAGCTCCAAGTAG
ATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAACAG
AAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATCTTTGGAATGTGAAC
CGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATGT
CTGCATACGCTACAGCTCTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAGG
CAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTACTCTAATTTGGATTGAAGCACT
GACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATGC
GGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAAG
ATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATTG
TTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAGT
AGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACCT
GAACGACCTAAAGATTGACGTTCAAAAAAAAATGAGCTTTGGAGCCAACTGAATTTGATG
CAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCCA
ATGATGAAATGTTAACGCG

consensusID : consensus_14755#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 317
fasta sequence

                              [GATCAGGCGCAGAAGCAGAGAAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCGTTGCAGCACACAGCATGCAGGCCCTGCAGGTCTGGCTGCAGCCACTTGCATTCAGCCGCAATCCAGCGCGGCGCACATGCCAGCTGGTCGCATGCAACTTGCAGCAGGGCCATGCTTCACTGCAGCAAGGCACATCTGCCAGCATTTGCAATCCCACCTGGCATCCAGCACATTGCCATTGGTTGCCACCAGCATTCCACATTTGGCCAGCAGCACACACCACAGCTTGCCACTTGGCAGCACA]

[+] EMBL CB965718             [GATCAGGCGCAGAAGCAGAGAAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGAAGTTGCGTTGCAGCACACAGCATGCAGGCCCTGCAGGTCTGGCTGCAGCCACTTGCATTCAGCCGCAATCCAGCGCGGCGCACATGCCAGCTGGTCGCATGCAACTTGCAGCAGGGCCATGCTTCACTGCAGCAAGGCACATCTGCCAGCATTTGCAATCCCACCTGGCATCCAGCACATTGCCATTGGTTGCCACCAGCATTCCACATTTGGCCAGCAGCACACACCACAGCTTGCCACTTGGCAGCACA]




>consensus_14755#1
GATCAGGCGCAGAAGCAGAGAAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGC
AAAAGAAGTTGCGTTGCAGCACACAGCATGCAGGCCCTGCAGGTCTGGCTGCAGCCACTT
GCATTCAGCCGCAATCCAGCGCGGCGCACATGCCAGCTGGTCGCATGCAACTTGCAGCAG
GGCCATGCTTCACTGCAGCAAGGCACATCTGCCAGCATTTGCAATCCCACCTGGCATCCA
GCACATTGCCATTGGTTGCCACCAGCATTCCACATTTGGCCAGCAGCACACACCACAGCT
TGCCACTTGGCAGCACA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14755#0      TGGCCGTGCAGTGCAGTGAAGCCCGCGCCGCGCCGTTTCACGGGTCCACGACGCCGCCTG 60
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      GTGGAACCGGTCCACCGTTCACGGCCACCGCCACCGCGGGCGCAGACGCCGAGGCGCGCG 120
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      CGGCCTCGCCGGAGAAGAGGAGGAGGATGGCGGAGAAGGCGGTGGGGCACGGGCCCAGGA 180
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      CGAGGATCCGCGGCGGCGGCCTCGCCGCCGCCCCCACCGCGCCCTCCGCCGCCGCGAGGA 240
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      GGCTGTCTGCGGTGTCGTACACGGCGGCGCCGAATCTGACCAAGAAGGTTCCTGACCCGA 300
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      AGGTTGTGAAGCCAGCCAGGAAAACGACGCCGGTCAAGAAGCGGCCGCAGGTAGATCAGG 360
consensus_14755#1      -----------------------------------------------------GATCAGG 7
                                                                            *******

consensus_14755#0      CGCAGAAGCAGAGAGAAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGA 420
consensus_14755#1      CGCAGAAGCAGAGA-AAGAGCTTGCCGCTTTGCAGGAGCAGCTGAGTGGCCTGCAAAAGA 66
                       ************** *********************************************

consensus_14755#0      AGTTGCTTGAGAAAGATGAGGCCCTGAGGTCGGCTGAGCACTTGATTAGCCGAATCAGCG 480
consensus_14755#1      AGTTGCGTT-GCAGCACACAGCATGCAGGCC--CTGCAGGTCTGGCTG-------CAGCC 116
                       ****** *  * *  *    **    *** *  ***      **  *        **** 

consensus_14755#0      CGGCGAATGCAGCGGTCGATGAACTGAGAGGGCAGCTTACTGAGAAGGAATCGCAGATTG 540
consensus_14755#1      ACTTGCATTCAGCCGC-----AATCCAGCGCGGCGCACA-TGCCAGCTGGTCGCATGCAA 170
                           * ** **** *      **   ** * *  **  * **  *     *****     

consensus_14755#0      AATCCACCGGATCAGAATTGCATGGTGCAAAGATTCAATTGGCAGAGAAACAAGCTGCAC 600
consensus_14755#1      CTTGCAGCAGGGCCATGCTTCACTGCAGCAAGGCACATCTGCCAGCATTTGCAATCCCAC 230
                         * ** * *  *     * **  *    ***   **  ** ***       *    ***

consensus_14755#0      TGGAGAAGTTAGAGTGGGAGGCAAAGGTTTCAAGTA-CAAAAGTCGAAGAGCTCCAAGTA 659
consensus_14755#1      CTG-GCATCCAGCACATT-GCCATTGGTTGCCACCAGCATTCCACATTTGGCCAGCAGCA 288
                         * * *   **       * **  **** * *  * **     *     **    ** *

consensus_14755#0      GATGTGGCGTCTATGGATGTTGAAATCTCTGCGTTAATGAAGCTATTTAGAAAAATAACA 719
consensus_14755#1      CACACCACAGCT-TGCCACTTGGCAGCACA------------------------------ 317
                        *     *  ** **    ***  * * *                               

consensus_14755#0      GAAAACGACCGAGCCCCTTACTCGAGGGAGAGAGCCGATGATTCATCTTTGGAATGTGAA 779
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      CCGGTTCAACTTGACGATATGGTTGGTGACATCGACATGGAGAAGATGGAGCAGGAAATG 839
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      TCTGCATACGCTACAGCTCTCGCTGCCGCGAAAGACAATCCTACTGACGAGTTCTTGAAG 899
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      GCAGTAACAGAGGCAAGACTAAGACTCCAAGCCTTCGTACTCTAATTTGGATTGAAGCAC 959
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      TGACATGCCCTGTACTACCTGAAGGAGTAGCTCTATTTTGATGGGCCATCATGTGTTATG 1019
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      CGGGTGTCATAATGCATCTAAACTGACAGCTCTTGCTTCCTGGATCTCACATTTCAAAAA 1079
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      GATCCATGTTTGCGTTCTGTCGGTCTGGGTCTGTCTGATGATGCCACTGAGCTTGTTATT 1139
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      GTTGTAACTTTGTAAGCTAAGAACCGTATGACACTATGACCGAACATCTGAACATCTTAG 1199
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      TAGATGTCACACCGTGTACCATTTTAGTGAAGGGTGAACAGAAGGTGAGTTCAGTTTACC 1259
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      TGAACGACCTAAAGATTGACGTTCAAAAAAAAATGAGCTTTGGAGCCAACTGAATTTGAT 1319
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      GCAGCATTTTACCCAGAAAACGAAGTCACGAGCTAACGTATGATATGTACACATTTGCCC 1379
consensus_14755#1      ------------------------------------------------------------
                                                                                   

consensus_14755#0      AATGATGAAATGTTAACGCG 1399
consensus_14755#1      --------------------