cluster # 1476

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Oryza sativa
cluster # 1476 cluster # 1476 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1476#0 length = 676 sequences # 2

consensusID : consensus_1476#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 676
fasta sequence

                              [TTTTTTTTTATACAATACGGTATTTATATTTCACACAGTAAGGTTTTGTATTCAAATACAAGGCATATCGGACATACACCACACAATAATAATACACAAGAAAATAAAGTTCTATGATGGACCCTCTGACCCTGCACACCACACACAGACTTTTTTGAATAGTTATATGGGACATACACAACATAACTACTAGTATAATACCACAGTACAGCTACAGAGCCTACAGGTACAGACATTGCGGGGATAACTGACAACTCACAAACAGTTTGACACATGTTTTTTTTTGGTGGGACATACTACTATACAAGATGTTTAGCTAGCTTCTTTCTTTTTTTTTTTTGATGTGGGCCATGAAAATGTTGCAAGGACATCT-TGAACTTGGACGGTGCGAGCATAGCAA-GGTAAACAAACCGGCA-CCCAAGAAGCAGGAGCAAGAATGCCAGGAAGGAGATTTCTGGTCCAC-TGATGAAGCCAGCCCATACGGCCAACACTGGTGCGGCCATCAGGATGTAGCCGGACCAGGCCACCTCCGCACGGTTCACCAGTTCAACACATGCTGGGCTTGTTGGTGTTGCTGCTCCCATGCTGTGGTTGTCTCCATGATATGCTGGAAACATTATATGGAGAAGACCGAAGAGCTTGAAGCAGCCGATGAGCCAGATCCCCAACAGAAGTA]

[+] EMBL CA761913             [TTTTTTTTTATACAATACGGTATTTATATTTCACACAGTAAGGTTTTGTATTCAAATACAAGGCATATCGGACATACACCACACAATAATAATACACAAGAAAATAAAGTTCTATGATGGACCCTCTGACCCTGCACACCACACACAGACTTTTTTGAATAGTTATATGGGACATACACAACATAACTACTAGTATAATACCACAGTACAGCTACAGAGCCTACAGGTACAGACATTGCGGGGATAACTGACAACTCACAAACAGTTTGACACATGTTTTTTTTTGGTGGGACATACTACTATACAAGATGTTTAGCTAGCTTCTTTCTTTTTTTTTTTTGATGTGGGCCATGAAAATGTTGCAAGGACATCT TGAACTTGGACGGTGCGAGCATAGCAA GGTAAACAAACCGGCA CCCAAGAAGCAGGAGCAAGAATGCCAGGAAGGAGATTTCTGGTCCAC TGATGAAGCCAGCCCATACGGCCAACACTGGTGCGGCCATCAGGATGTAGCCGGACCAGGCCACCTCCGCACGGTTCACCAGTTCAACACATGCTGGGCTTGTTGGTGTTGCTGCTCCCATGCTGTGGTTGTCTCCATGATATGCTGGAAACATTATATGGAGAAGACCGAAGAGCTTGAAGCAGCCGATGAGCCAGATCCCCAACAGAAGTA]
[-] EMBL BI804345             [                                                                                                                                                                                                                                                                                                                                                TTTTGATGTGGGCCATGAAAATGTTGCAAGGACATCTGTGAACTTGGACGGTGCGAGCATAGCAAGGGTAAACAAACCGGCAGCCCAAGAAGCAGGAGCAAGAATGCCAGGAAGGAGATTTCTGGTCCACGTGATGAAGCCAGCCCATACGGCCAACACTGGTGCGGCCATCAGGATGTAGCCGGACCAGGCCACCTCCGCACGGTTCACCAGTTCAACACATGCTGGGCTTGTTGGTGTTGCTGCTC                                                                                                ]




>consensus_1476#0
TTTTTTTTTATACAATACGGTATTTATATTTCACACAGTAAGGTTTTGTATTCAAATACA
AGGCATATCGGACATACACCACACAATAATAATACACAAGAAAATAAAGTTCTATGATGG
ACCCTCTGACCCTGCACACCACACACAGACTTTTTTGAATAGTTATATGGGACATACACA
ACATAACTACTAGTATAATACCACAGTACAGCTACAGAGCCTACAGGTACAGACATTGCG
GGGATAACTGACAACTCACAAACAGTTTGACACATGTTTTTTTTTGGTGGGACATACTAC
TATACAAGATGTTTAGCTAGCTTCTTTCTTTTTTTTTTTTGATGTGGGCCATGAAAATGT
TGCAAGGACATCTTGAACTTGGACGGTGCGAGCATAGCAAGGTAAACAAACCGGCACCCA
AGAAGCAGGAGCAAGAATGCCAGGAAGGAGATTTCTGGTCCACTGATGAAGCCAGCCCAT
ACGGCCAACACTGGTGCGGCCATCAGGATGTAGCCGGACCAGGCCACCTCCGCACGGTTC
ACCAGTTCAACACATGCTGGGCTTGTTGGTGTTGCTGCTCCCATGCTGTGGTTGTCTCCA
TGATATGCTGGAAACATTATATGGAGAAGACCGAAGAGCTTGAAGCAGCCGATGAGCCAG
ATCCCCAACAGAAGTA

clustalw multiple alignements is not computed in this case