These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14790#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1538 fasta sequence [TTGCTCTCTCTGGTGAGGGAAATGAGCAGTGACACAAGCAGGCGGGATCATGCCGCCATGGCCGTGCGGGAGGTCCTCGCCGGCGACAGGAAGGTGGGCACCGTGTCCAGGTCGGCGAGGAGGAGGAGGCTTGAGCTCCGGAGGCTCGGGCGGACGGCGTCGGCGGTGGCGGAGGATGACGCCGCGAAGAGGGTGCGGCCGGCGTCGGACAGCTCCTCCGACTCGTCGGAGTCGGCTAAGGTAGCGCCCGAGCCCACCGCGGAGGTGGCGAGATGGCCGGCGTGCGTGTCGCACGGGGCGGTGTCGGTGATCGGGCGCCGGAGGGAGATGGAAGACGCCATCTTCGTCGCGGCGCCGTTCTTGGCCGCCTCGAAGGAGGCGGCGGTGGAGGGGAGCGGCGTCGCGGAAGAGGAAGGCAAGGAGGAGGATGAGGGGTTCTTCGCGGTGTACGACGGGCACGGCGGGTCCCGCGTGGCGGAGGCGTGCCGGGAGCGGATGCACGTGGTGCTCGCGGAGGAGGTGCGGGTGCGGAGGCTGCTGCAGGGCGGGGGCGGCGGCGCCGACGTCGAGGACGAGGACCGCGCCCGTTGGAAGGAGGCCATGGCGGCCTGCTTCACCCGCGTGGACGGCGAGGTCGGCGGCGCCGAGGAGGCCGACACGGGCGAGCAGACGGTGGGCTCCACCGCCGTCGTCGCCGTCGTGGGTCCCCGCCGCATCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTCCTCTCCCGCGGCGGCGTGGCCGTGCCGCTCTCCTCCGACCACAAGCCAGACAGACCTGACGAGATGGAGAGAGTAGAAGCAGCAGGTGGCAGGGTTATCAATTGGAATGGATACCGTATCCTCGGTGTCCTTGCTACTTCTAGGTCAATTGGAGACTATTACCTCAAGCCATATGTAATAGCTGAGCCTGAGGTCACAGTCAT-GGACAGGACGGACAAGGACGAGTTCCTCATATTGGCGAGCGACGGGCTGTGGGATGTGGTATCCAACGATG-TGGCCTGCAAGA-TTGCGAGAAATTGC-TTAAGC-GGGCGGGCAGCTTCCAAGTACCCAGAATCCGTCTCCGGGAGCACCGCAGCCGATGCTGCCGCCCTGCTGGTCGAGCTCGCCATCTCCCGTGGCAGCAAGGACAACATCAGCGTCGTCGTGGTCGAGTTGAGACGGCTGAGGAGTAGAACGACGGCGAGCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCATTGGTTATCTCTGTCTCTCGTGTCAAAAAAAAAAA] [+] EMBL AK068272 [TTGCTCTCTCTGGTGAGGGAAATGAGCAGTGACACAAGCAGGCGGGATCATGCCGCCATGGCCGTGCGGGAGGTCCTCGCCGGCGACAGGAAGGTGGGCACCGTGTCCAGGTCGGCGAGGAGGAGGAGGCTTGAGCTCCGGAGGCTCGGGCGGACGGCGTCGGCGGTGGCGGAGGATGACGCCGCGAAGAGGGTGCGGCCGGCGTCGGACAGCTCCTCCGACTCGTCGGAGTCGGCTAAGGTAGCGCCCGAGCCCACCGCGGAGGTGGCGAGATGGCCGGCGTGCGTGTCGCACGGGGCGGTGTCGGTGATCGGGCGCCGGAGGGAGATGGAAGACGCCATCTTCGTCGCGGCGCCGTTCTTGGCCGCCTCGAAGGAGGCGGCGGTGGAGGGGAGCGGCGTCGCGGAAGAGGAAGGCAAGGAGGAGGATGAGGGGTTCTTCGCGGTGTACGACGGGCACGGCGGGTCCCGCGTGGCGGAGGCGTGCCGGGAGCGGATGCACGTGGTGCTCGCGGAGGAGGTGCGGGTGCGGAGGCTGCTGCAGGGCGGGGGCGGCGGCGCCGACGTCGAGGACGAGGACCGCGCCCGTTGGAAGGAGGCCATGGCGGCCTGCTTCACCCGCGTGGACGGCGAGGTCGGCGGCGCCGAGGAGGCCGACACGGGCGAGCAGACGGTGGGCTCCACCGCCGTCGTCGCCGTCGTGGGTCCCCGCCGCATCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTCCTCTCCCGCGGCGGCGTGGCCGTGCCGCTCTCCTCCGACCACAAGCCAGACAGACCTGACGAGATGGAGAGAGTAGAAGCAGCAGGTGGCAGGGTTATCAATTGGAATGGATACCGTATCCTCGGTGTCCTTGCTACTTCTAGGTCAATTGGAGACTATTACCTCAAGCCATATGTAATAGCTGAGCCTGAGGTCACAGTCAT GGACAGGACGGACAAGGACGAGTTCCTCATATTGGCGAGCGACGGGCTGTGGGATGTGGTATCCAACGATG TGGCCTGCAAGA TTGCGAGAAATTGC TTAAGC GGGCGGGCAGCTTCCAAGTACCCAGAATCCGTCTCCGGGAGCACCGCAGCCGATGCTGCCGCCCTGCTGGTCGAGCTCGCCATCTCCCGTGGCAGCAAGGACAACATCAGCGTCGTCGTGGTCGAGTTGAGACGGCTGAGGAGTAGAACGACGGCGAGCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCAT ] [+] EMBL C91732 [ tngnanGCAGTGACACAAGCAGGCGGGATCATGCCGCCATGGCCGTGCGGGAGGTCCTCGCCGGCGACAGGAAGGTGGGCACCGTGTCCAGGTCGGCGAGGAGGAGGAGGCTTGAGCTCCGGAGGCTCGGGCGGACGGCGTCGGCGGTGGCGGAGGATGACGCCGCGAAGAGGGTGCGGCCGGCGTCGGACAGCTCCTCCGACTCGTCGGAGTCGGCTAAGGTAGCGCCCGAGCCCACCGCGGAGGTGGCGAGATGGCCAGCGTGCGTGTCGAAGNGNGCGGTGTCGGTGATCGGGCGCC GAAGGAGATt ] [+] EMBL C73034 [ GGGCGAGCAGACGGTGGGCTCCACCGCCGTCGTCGCCGTCGTGGGTCCCCGCCGCATCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTCCTCTCCCGCGGCGGCGTGGCCGTGCCGCTCTCCTCCGACCACAAGCCAGACAGACCTGACGAGATGGAGAGAGTAGAAGCAGCAGGTGGCAGGGTTATCAATTGGAATGGATACCGTATCCTCGGTGTCCTTGCTACTTCTAGGTCAATTGGAGACTATTACCTCAAGCCATATGTAATAGCTGAGCCTGAGGTCACAGTCATGGGACAGGACGGACAAGGACGAGTTCCTCATATTGGCGAGCGACGGGCTGTGGGATGTGGTATCCAACGATGTTGGCCTGCAAGATTTTCGAGAAATTGCNTTAAGCGGGGCGGGCAACTTTCAAGTAACCAGAATCCGTCTNCGGG ] [+] EMBL AU172623 [ CAGCCGATGCTGCCGCCCTGCTGGTCGAGCTCGCCATCTCCCGTGGCAGCAAGGACAACATCAGCGTCGTCGTGGTCGAGTTGAGACGGCTGAGGAGTAGAACGACGGCGAGCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCATTGGTTATCTCTGTCTCTCGTGTCAAAAAAAAAAA] consensusID : consensus_14790#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1426 fasta sequence [CTCGTTGCTCCTGAGATCGTCTCGTCTCGTGGTGGTGGTGGTGGCCATTGCCGGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGTCGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGAGG-GGCGG-CGGGCGGGAGTTGAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTGGCGGCGGAGGAGGCCGCGACGAGGAAGCGGAGGGCGAGTGGTGGTGAGGCCGGGTTGGTGGTGGTGGCGAA-CGGCACGGGGCGGCGTCGGTCGCCGGGAGGAGGAGGGAGATGGAGGACGCCGTGTCGCTGCGCGAGGCGTTCGCCGCGCCGGCGAAC-GGGGAGGTTGCGGCGGCG-AGGTGTGAC-TTCTACGGGGTGTTCGACGGGCACGGCTGCTCGCACGTGGCGGACGCGTGCAGGGAGCGGATGCACGAGCTCGTCGCGGAGGAGATGGGCGCCGGGTCACCGGCGGCGGCGGCGCGCGAGCCGGCGTCTTGGACGGAGACGATGGAGCGGAGCTTCGCGAGGATGGACGCCGAGGTGATCGCCGGCTGCCGAGCCGAGAGCGGCAGCTGCCGGTGCGAGGGGCAGAAGTGCGACCACGTGGGGTCCACCGCGGTGGTGGCCGTCGTGGAGGAGAGCCGCGTCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTGCTCTGCCGCGGCGGCGCGCCCGTGCAGCTATCCTCCGACCACAAGCCCGACCGCCCCGACGAGCTGGAGCGGATCGAGGCGGCCGGCGGCCGCGTCATCTTCTGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG-TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT-GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC-AAGATTATTTGAAAAAAAAAAAAAAAAAAA] [+] EMBL AK063334 [CTCGTTGCTCCTGAGATCGTCTCGTCTCGTGGTGGTGGTGGTGGCCATTGCCGGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGTCGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGAGGCGGCGG CGGGCGGGAGTTGAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTGGCGGCGGAGGAGGCCGCGACGAGGAAGCGGAGGGCGAGTGGTGGTGAGGCCGGGTTGGTGGTGGTGGCGAAGCGGCACGGGGCGGCGTCGGTCGCCGGGAGGAGGAGGGAGATGGAGGACGCCGTGTCGCTGCGCGAGGCGTTCGCCGCGCCGGCGAAC GGGGAGGTTGCGGCGGCG AGGTGTGAC TTCTACGGGGTGTTCGACGGGCACGGCTGCTCGCACGTGGCGGACGCGTGCAGGGAGCGGATGCACGAGCTCGTCGCGGAGGAGATGGGCGCCGGGTCACCGGCGGCGGCGGCGCGCGAGCCGGCGTCTTGGACGGAGACGATGGAGCGGAGCTTCGCGAGGATGGACGCCGAGGTGATCGCCGGCTGCCGAGCCGAGAGCGGCAGCTGCCGGTGCGAGGGGCAGAAGTGCGACCACGTGGGGTCCACCGCGGTGGTGGCCGTCGTGGAGGAGAGCCGCGTCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTGCTCTGCCGCGGCGGCGCGCCCGTGCAGCTATCCTCCGACCACAAGCCCGACCGCCCCGACGAGCTGGAGCGGATCGAGGCGGCCGGCGGCCGCGTCATCTTCTGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCT GTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATG ] [+] EMBL AU163499 [ TGAGATCGTCTCGTCTCGTGGTGGTGGTGGTGGCCATTGCCGGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGTCGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGAGG NGCGGACGGGCGGGAGTTGAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTGGCGGCGGAGGAGGCCGCGACGAGGAAGCGGAGGGCGAGTGGTGGTGAGGCCGGGTTGGTGGTGGTGGCGAA CGGCACGGGGCGGCGTCGGTCGCCGGGAGGAGGAGGGAGATGGAGGACGCCGTGTCGCTGCGCGANGCGTTCGCCGCGCCGGCGAACGGGGGAAGTTNCGGCGGCGAAGTTTTGACTTTCTACG ] [+] EMBL AU164301 [ GCCGGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGTCGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGA G GGCGG CGGGCGGGAGTNGAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTTGCGGCGGAGGAGGCCGCGACGAGGAAGCGGAGGGCGAGTTGTGGTGANGCCGGGTTGGTGGTGGTGGCGAA CGGCACGGGGCGGCGTCGGTC NCGGGAAGAGGAATGAAANGGAGGACG ] [+] EMBL AU163500 [ CGGATGCACGAGCTCNTCGCGGAGGAGATGGGCGCCGGGTCACCGGCGGCGGCGGCGCGCGAGCCGGCGTCTTGGACGGAGACGATGGAGCGGA NTTCGCGAGGATGGACGCCGAGGTGATCGCCGGCTGCCGAGCCGAGAGCGGCAGCTGCCGGTGCGAGGGGCAGAAGTGCGACCACGTGGGGTCCACCGCGGTGGTGGCCGTCGTGGAGGAGAGCCGCGTCGTCGTCGCCAACTGCGGCGACTCCCGCGCCGTGCTCTGCCGCGGCGGCGCGCCCGTGCAGCTATCCTCCGACCACAAGCCCGACCGCCCCGACGAG ] [+] EMBL AU165833 [ cgcggtGCGGCCG GTCATCTTCTGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTANGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTTGGGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC A ] [+] EMBL AU161440 [ TGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGCAAAGATTATTTGAA ] [+] EMBL AU161468 [ TGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC AAGATTATTTGA ] [+] EMBL AU093334 [ TGGGAGGGCGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCCCTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTT ] [+] EMBL OSC1760A [ GCAGGTGGAACTTCGACGAGTGCCTCATNCTCGCCAGCNACGGCCTCTGGGNCGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTNCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACG CTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTC ] [+] EMBL CF303839 [ GCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC AAGATT ] [+] EMBL CF303424 [ GCAGGTCGGACTTCGACGAGTGCCTCATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGCGCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGACCAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCGGCGAGGCAACGCCTTG TAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGTTAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAA ] [+] EMBL C97715 [ GCCTTGTTAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGTATTGCAGATANTAGCTAAGCTAATGGTTCTACTAANCTTTTTTTTTCANTTCCCTTGTGTTNAAAANCATTTTTTTTCTCTTCTAANTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCACATAGANCAGGTGATGGGGTTGTGCAACTGCTAGTT GGTGTAACCAGAATTTCATCTGGATACCAACTGAAATGAAATGAATATTAAGC AAGATTATTTGAAAAAAAAAAAAAAAAAAA] consensusID : consensus_14790#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 321 fasta sequence [GCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCATTGGTTAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF309964 [GCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTGATCATTGGTTAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF312508 [GCAAAGAGAACGGTAGGTAGCGTGTAGAAGTTGGAGCGGCTGTCACAGCATTTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTGCTGGGATGTTTGTAAAGAGAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGATGTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGAGATGCTGTATTGCGTTGAGTTGGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCATGAAGCATGTGCTGATTTCGTCTGTTCTAA A AAAAAAAAAAAAAAAAAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14790#0 TTGCTCTCTCTGGTGAGGGAAATGAGCAGTGACACAAGCAGGCGGGATCATGCCGCCATG 60 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GCCGTGCGGGAGGTCCTCGCCGGCGACAGGAAGGTGGGCACCGTGTCCAGGTCGGCGAGG 120 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 AGGAGGAGGCTTGAGCTCCGGAGGCTCGGGCGGACGGCGTCGGCGGTGGCGGAGGATGAC 180 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GCCGCGAAGAGGGTGCGGCCGGCGTCGGACAGCTCCTCCGACTCGTCGGAGTCGGCTAAG 240 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GTAGCGCCCGAGCCCACCGCGGAGGTGGCGAGATGGCCGGCGTGCGTGTCGCACGGGGCG 300 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GTGTCGGTGATCGGGCGCCGGAGGGAGATGGAAGACGCCATCTTCGTCGCGGCGCCGTTC 360 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 TTGGCCGCCTCGAAGGAGGCGGCGGTGGAGGGGAGCGGCGTCGCGGAAGAGGAAGGCAAG 420 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GAGGAGGATGAGGGGTTCTTCGCGGTGTACGACGGGCACGGCGGGTCCCGCGTGGCGGAG 480 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GCGTGCCGGGAGCGGATGCACGTGGTGCTCGCGGAGGAGGTGCGGGTGCGGAGGCTGCTG 540 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 CAGGGCGGGGGCGGCGGCGCCGACGTCGAGGACGAGGACCGCGCCCGTTGGAAGGAGGCC 600 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 ATGGCGGCCTGCTTCACCCGCGTGGACGGCGAGGTCGGCGGCGCCGAGGAGGCCGACACG 660 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GGCGAGCAGACGGTGGGCTCCACCGCCGTCGTCGCCGTCGTGGGTCCCCGCCGCATCGTC 720 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GTCGCCAACTGCGGCGACTCCCGCGCCGTCCTCTCCCGCGGCGGCGTGGCCGTGCCGCTC 780 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 TCCTCCGACCACAAGCCAGACAGACCTGACGAGATGGAGAGAGTAGAAGCAGCAGGTGGC 840 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 AGGGTTATCAATTGGAATGGATACCGTATCCTCGGTGTCCTTGCTACTTCTAGGTCAATT 900 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 GGAGACTATTACCTCAAGCCATATGTAATAGCTGAGCCTGAGGTCACAGTCATGGACAGG 960 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ------------------------------------------------------------ consensus_14790#0 ACGGACAAGGACGAGTTCCTCATATTGGCGAGCGACGGGCTGTGGGATGTGGTATCCAAC 1020 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 --------CTCGTTGCTCCTGAGATCGTCTCGTCTCGTGGTGGTGGTGGTGGCCATTGCC 52 consensus_14790#0 GATGTGGCCTGCAAGATTGCGAGAAATTGCTTAAGCGGGCGGGCAGCTTCCAAGTACCCA 1080 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 GGAGCTTCCAAGGTGTTTGATGTCGATGGCGGAGGTGTGCTGTGATTCTGCGGTGGTGGT 112 consensus_14790#0 GAATCCGTCTCCGGGAGCACCGCAGCCGATGCTGCCGCCCTGCTGGTCGAGCTCGCCATC 1140 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CGGGGCGGAGGCGGAGGCGAGGGCGAGGGCGCGCGCCGGGAGGGGCGGCGGGCGGGAGTT 172 consensus_14790#0 TCCCGTGGCAGCAAGGACAACATCAGCGTCGTCGTGGTCGAGTTGAGACGGCTGAGGAGT 1200 consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 GAGGGGGCAGGGAGGTGGAACGCCACGGCGACGGCTGCGGGTGTGGCGGCGGAGGAGGCC 232 consensus_14790#0 AGAACGACGGCGAGCAAAGAGAACGGTAGGTAG--CGTGTAGAAGTTGG-AGCGGCTGTC 1257 consensus_14790#2 -------------GCAAAGAGAACGGTAGGTAG--CGTGTAGAAGTTGG-AGCGGCTGTC 44 consensus_14790#1 GCGACGAGGAAGCGGAGGGCGAGTGGTGGTGAGGCCGGGTTGGTGGTGGTGGCGAACGGC 292 * * * ** *** * ** ** ** * * *** *** * * consensus_14790#0 ACAGCAT----TTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTG 1313 consensus_14790#2 ACAGCAT----TTGAGCATGGCGAGAGAGGAAGAAGCTAGAGGATTTGCAGCTGAGTTTG 100 consensus_14790#1 ACGGGGCGGCGTCGGTCGCCGGGAG-GAGGAGGGAGATGGAGGAC--GCCGTGTCGCTGC 349 ** * * * * * *** ***** * ** * ***** ** * * * consensus_14790#0 CTGGGATGTTTGTAAAGA-GAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGAT 1372 consensus_14790#2 CTGGGATGTTTGTAAAGA-GAAGGCTCAGGATATTATTCCGTCCATAGAGCTGCTCCGAT 159 consensus_14790#1 GCGAGGCGTTCGCCGCGCCGGCGAACGGGGAGGTTGCGGCGGCGA-GGTGTGACTTCTAC 408 * * *** * * * * *** ** ** * * * * ** * * consensus_14790#0 GTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGA--GATGC-TGTATTGCGTTGAGTT- 1428 consensus_14790#2 GTCGTGACCGATGAGCGTGTGCTATTTGTAGCTGA--GATGC-TGTATTGCGTTGAGTT- 215 consensus_14790#1 GGGGTGTTCGACGGGCACG-GCTGCTCGCACGTGGCGGACGCGTGCAGGGAGCGGATGCA 467 * *** *** * ** * *** * * * ** ** ** ** * * * ** consensus_14790#0 -GGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCA-TGAAGCATGTGCTGAT 1486 consensus_14790#2 -GGGTTCTTTAGTTCTTAAGCTGACATTTCGGCCGAGGCAGCA-TGAAGCATGTGCTGAT 273 consensus_14790#1 CGAGCTCGTCGCGGAGGAGATGGGCGCCGGGTCACCGGCGGCGGCGGCGCGCGAGCCGGC 527 * * ** * * * * * * *** ** * ** * ** * consensus_14790#0 TTCGTCTGTTCTGATCATTGGTTATCTCTGTCTCTCGTGTCAAAAAAAAAAA-------- 1538 consensus_14790#2 TTCGTCTGTTCTGATCATTGGTTAAAAAAAAA----AAAAAAAAAAAAAAAA-------- 321 consensus_14790#1 GTCTTGGACGGAGACGATGGAGCGGAGCTTCGCGAGGATGGACGCCGAGGTGATCGCCGG 587 ** * ** ** * * * consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CTGCCGAGCCGAGAGCGGCAGCTGCCGGTGCGAGGGGCAGAAGTGCGACCACGTGGGGTC 647 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CACCGCGGTGGTGGCCGTCGTGGAGGAGAGCCGCGTCGTCGTCGCCAACTGCGGCGACTC 707 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CCGCGCCGTGCTCTGCCGCGGCGGCGCGCCCGTGCAGCTATCCTCCGACCACAAGCCCGA 767 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CCGCCCCGACGAGCTGGAGCGGATCGAGGCGGCCGGCGGCCGCGTCATCTTCTGGGAGGG 827 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CGCCCGTGTCCTCGGCGTCCTCGCCATGTCGCGCTCCATCGGCGACGCCTACCTGAAGCC 887 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CTACGTCACCGCCGTGCCGGAGGTGACGGTGACCGGCAGGTCGGACTTCGACGAGTGCCT 947 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CATCCTCGCCAGCGACGGCCTCTGGGACGTCGTCAGCAACGAGGCCGCGTGCGAGGTGGC 1007 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 GCAGTCGTGCCTCCGCCGCGGCAGGCAGCGGTGGTGCGCCGAGGCGGCGGCGGTGCTGAC 1067 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CAAGCTGGCCCTCGCTCGCCGCAGCTCCGACAACATCTCTGTCGTCGTCGTCGATCTCCG 1127 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 GCGAGGCAACGCCTTGTAGAGAGAGTGTCACCCAGCTGATGCTGTAGCATCAGTACTAGT 1187 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 ATTGCAGATATTAGCTAAGCTAATGGTTCTACTAATCTTTTTTTTTCATTTCCCTTGTGT 1247 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 TAAAAATCATTTTTTTTCTCTTCTAATTTTCTCCCTGAATTAACCAAGTTCAGTGGAGCA 1307 consensus_14790#0 ------------------------------------------------------------ consensus_14790#2 ------------------------------------------------------------ consensus_14790#1 CATAGATCAGGTGATGGGGTTGTGCAACTGCTAGTTGGTGTAACCAGAATTTCATCTGGA 1367 consensus_14790#0 ----------------------------------------------------------- consensus_14790#2 ----------------------------------------------------------- consensus_14790#1 TACCAACTGAAATGAAATGAATATTAAGCAAGATTATTTGAAAAAAAAAAAAAAAAAAA 1426 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||