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Oryza sativa
cluster # 14796 cluster # 14796       Sequences # 18       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14796#0 length = 632 sequences # 15  
consensus_14796#1 length = 412 sequences # 1  
consensus_14796#2 length = 357 sequences # 1  
consensus_14796#3 length = 308 sequences # 1  

consensusID : consensus_14796#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 632
fasta sequence
                              [ACGACGCTTTGTGATTTGAGTCTCCTCTCGCTCGCGTCGGGC-TAC--GTG-CTACGTTTTT--CTTCTTC-TTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC-GGC-GCCGTC-GCC-GATGGCCGGGGCGGCGCCC-GGGAGC-GC-GTCCCC-GCTCGCCGTCGC-GTCCTCCGC-GCTC-GTC-ACCCTGCTC-GCGGCGGC-GCTCATGCAGTAGAC-GACGAC-GCGACGACTCCGGCTTCTCCCGCGCGC-GTGGCTCCGGAT-TTGGTTGC-GTCGATCGAGCTGCGAT-C-AAATC-ATGC-ATAGTTGGTTTCTTTCTTCTTT-ATTATAATT-CCTTC-TTCTTTGGGG---GAGAGAGAGAGAGATTATTGAGT-GA-GGGTAG-TTTGATGTTGAGTGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTA-C--CATTTCT-GTACCTCATTAATT-ACTA-CTA-CTACTATGTG-C-CTTCATTCGTA-TGAATAAATCC-GGATCATT--TCATC-TTCTG-AAATGA-TCCG-TTTGCACCA-GCAAAAAAATAAAATAGATTGTTGTTTGTGGTGG]

[+] EMBL AK062356             [ACGACGCTTTGTGATTTGAGTCTCCTCTCGCTCGCGTCGGGC TAC  GTG CTACGTTTTT  CTTCTTC TTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC GGC GCCGTC GCC GATGGCCGGGGCGGCGCCC GGGAGC GC GTCCCC GCTCGCCGTCGC GTCCTCCGC GCTC GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGC ATAGTTGGTTTCTTTCTTCTTT ATTATAATT CCTTC TTCTTTGGGG   GAGAGAGAGAGAGATTATTGAGT GA GGGTAG TTTGATGTTGAGTGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTA C  CATTTCT GTACCTCATTAATT ACTA CTA CTACTATGTG C CTTCATTCGTA TGAATAAATCC GGATCATT  TCATC TTCTG AAATG                                                   ]
[+] EMBL OSC23491             [         TGTGATTTGAGTCTCCTCTCGCTCGCGTCGGGC TAC  GTG CTACGTTTTT  CTTCTTC TTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC GGC GNCGTC GCC GATGGCCGGGGCGGCGCCC GGGAGC GC GTCCCC GCTCGCCGTCGC GTCCTCCGC GCTC GTC ACCCTGCTC GCGGCGGC GNTCATGCAGTAGAC GACGAC GCGACGACTCCGNCTTCTCCCGCGNGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGATNCAAAATCAATGA ANAGTGGGTTCTTTTCTTCTTTAATNANAATT CCTTC TTCTTTt                                                                                                                                                                                                                                                          ]
[+] EMBL AU181826             [         TGTGATTTGAGTCTCCTCTCGCTCGCGTCGGGC TAC  GTG CTACGTTTTT  CTTCTTC TTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC GGC GCCGTC GCC GATGGCCGGGGCGGCGCCC GGGAGC GC GTCCCC GCTCGCCGTCGC GTCCTCCGC GCTC GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGC ATAGTTGGTTTCTTTCTTCTTT ATTATAATT CCTTC TTCTTTGGGG   GAGAGAGAGAGNGATTATTG                                                                                                                                                                                                                                ]
[+] EMBL AU174760             [           TGATTTGAGTCTCCTCTCGCTCGCGTCGTGC TAC  GTG CTACGTTTTT  CTTCTTC TTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC GGC GCCGTC GCC GATGGCCGGGGCGGCGCCC GGGAGC GC GTCCCC GCTCGCCGTCGC GTCCTCCGC GCTC GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGC ATAGTTGGTTTCTTTCTTCTTT ATTATAATT CCTTCTTTCTTTTGGG   GGGAG                                                                                                                                                                                                                                               ]
[+] EMBL CA753187             [            GATTTGAGTCTCCTCTCGCTCGCGTCGTGC TAC  GTG CTACGTTTTT  CTTCTTC TTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC GGC GCCGTC GCC GATGGCCGGGGCGGCGCCC GGGAGC GC GTCCCC GCTCGCCGTCGC GTCCTCCGC GCTC GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGC ATAGTTGGTTTCTTTCTTCTTT ATTATAATT CCTTC TTCTTTGGGGGGAGAGAGAGAGAGAGATTATTGAGT GA GGGTAG TTTGATGTCGAGTGGTTCTTGTGCTCTTGATCTCCCTGATGGACTTTCTTTTCTGTGTACC  CTTTTCTGGTCCCTCATTAATTAACTACCTACCTACTATGTGCC CTTCATTCGTATTGAATAAATCCGGGATCCTTTCTCTTCTTTCTGAAAATGATTCCGTTTTGCCCCANGCCACAAAATAAAATAGATTGTTGTTTGTGGTGG]
[+] EMBL OS1652A              [                   GTCTCCTCTCGCTCGCGTCGGGC TAC  GTG CTACGTTTTT  CTTCTTC TTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGNC GGC GCCGTC GCC GATGGCCGNGGCGGCGCCC GGAAGC GC GTCCCC GCTCNCCGTCGC GTCCTCCGC GCTC GTA ACCCTNCTA GCGGCGGC GCTCATGCAGTANAC GACGAC GCGACGAC                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OS1380A              [                         TCTNGCTCGCGTCGGGC TAC  GTG CTACGTTTTT  NTTCTTC TTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC GGC GNCGTC GCC GATGGCCGGGGCGGCGCCC GGGAGC GC GTCCCC GNTCGCNGTCGC GTCCTNCGC GCTC GTN ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GTGACGACTt                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BI805599             [                                      GGGCTTACCGGTGCCTACGTTTTTTCCTTCTTCTTTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGTCGGTGCTGCTGAT GCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC GGC GCCGTC GCC GATGGCC GGGCGGCGCCC GGGAGC GC GTCCCC GCTCGCCGTCGC GTCCTCCGC GCTC GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C  AATC ATGC ATAGTTGGTTTCTTTCTTCTTT ATTATAATT CCTTC TTCTTTGGGG   GAGAGAGAGAGAGATTATTGAGT GA GGGTAG TTTGATGTTGAGTGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTA C  CATTTCT GTACCTCATTAATT ACTA CTA CTACTATGT  C CTTCATTCGTA TGAATAAATCC GGATCATT  TCATC TTCTG AAATGA TCCT TTTGCACCA  CAAAAA                           ]
[+] EMBL AU181827             [                                                                                                                                      GCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCC GGC GCCGTC GCC GATGGCCGGGGCGGCGCCC GGGAGC GC GTCCCC GCTCGCCGTCGC GTCCTCCGC GCTC GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGCAATAGTTGGTTTCTTTCTTCTTT ATTATAATTCCCTTC TTCTTTGGGG   GAGAGAGAGAGAGATTATTGAGT GAGGGGTAG TTTGATGTTGAGTGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTA C  CATTTCT GTACCTCATTAATT ACTA CTA CTACTATGTG C CTTCATTCGTA T AATAAAaaa                                                                               ]
[+] EMBL AU174759             [                                                                                                                                                                  TTCAACGCGCCGGCCTCCTCGCC GGC GCCGTC GCC GATGGCCGGGGCGGCGCCC GGGAGC GC GTCCCC GCTCGCCGTCGC GTCCTCCGC GCTC GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGC ATAGTTGGTTTCTTTCTTCTTT ATTATAATT CCTTC TTCTTTGGGGGA GAGAGAGAGAGAGATTATTGAGT GA GGGTAG TTTGATGTTGAGTGGTTCTTGTGCTCTTGATCTTGCTGATGGACATTCTTTTCTGTGTA C  CATTTCT GTACCTCATTAATT ACTA CTA CTACTATGTG C CTTCATTCGTA TGAATAAATCC GGATCATT  TCATC TTCTG AAATGA TCCG TTTGCACCA GCAAAAAAAaa                       ]
[+] EMBL BI801834             [                                                                                                                                                                               CCTCCTCGCCAGGCACCCGTCAGCCAGATGCCCGGGCAGGCGCCCAGGGAGCAGCAGTCCCCAGCTCGCCGTCGCAGTCCTCCGCAGCTC GTCAACCCTGCTCAGCGGCGGCAGCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGCAGTGGCTCCGGATGTTGGTTGCAGTCGATCGAGCTGCGAT CAAAATC ATGC ATAGTTGGTTTCTTTCTTCTTT GTTATAATT CCTTC TTCTTTGGGGGA GAGAGAGAGAGAGATTATTGAGT GA GGGTAGCTTTGATGTTGA TGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTA C  CATTTCT GTACCTCATTAGTT ACTA CTA CTACTATGT  C CTTCATTCGTA TGAATAAATCC GGATCATT  TCATC TTCTG AAATGA TCCG TTTGCA                                      ]
[+] EMBL BI802861             [                                                                                                                                                                                                                     GGCGCCC  GGAGC GCTGTCCCCAGCTCGCCGTCGC GTCCTCCGC GCTCAGTC ACCCTGCTC GCGCAGGC GCTCATGCAGTAGACAGACGACTGCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGC ATAGTTGGTTTCTTTCTTCTTT ATTATAATT CCTTC TTCTTTGGGGGA GAGAGAGAGAGAGATTATTGAGTCGACGGGTAG TTTGATGTTGAGTGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTA CCACATTTCT GTACCTCATTAATT ACTA CTA CTACTATGTG CACTTCATTCGTA TGAATAAATCCAGGATCATT  TCATC TTCTG AAATGA TCCG TTTGCACCA AAAAAAAAA                         ]
[+] EMBL CB000116             [                                                                                                                                                                                                                                                                       TC GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTCGTT GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGC ATAGTTGGTTTCTTTCTTCTTT ATTATAATT CCTTC TTCTTTGGGG   GAGAGAGAGAGAGATTATTGAGT GA GGGTAG TTTGATGTTGAGTGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTA C  CATTTCT GTGCCTCATTAATT ACTA CTA CTACTATGTG C CTTCATTCGTA TG                                                                                        ]
[+] EMBL CB000741             [                                                                                                                                                                                                                                                                        C GTC ACCCTGCTC GCGGCGGC GCTCATGCAGTAGAC GACGAC GCGACGACTCCGGCTTCTCCCGCGCGC GTGGCTCCGGAT TTGGTTGC GTCGATCGAGCTGCGAT C AAATC ATGC ATAGCTGGTTTCTTTCTTCTTT ATTATAATT CCTTC TTC                                                                                                                                                                                                                                                              ]
[-] EMBL BU673657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   T GA GGGTAG TTTGATGTTGGGTGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTA C  CATTTCT GTACCTCATTAATT ACTA CTA CTACTATGTG C CTTCATTCGTA TGAATAAATCC GGATCATT  TCATC TTCTG AAATGA TCC                                              ]


>consensus_14796#0 ACGACGCTTTGTGATTTGAGTCTCCTCTCGCTCGCGTCGGGCTACGTGCTACGTTTTTCT TCTTCTTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGG CCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGCCGGCCTCCTCGCCGG CGCCGTCGCCGATGGCCGGGGCGGCGCCCGGGAGCGCGTCCCCGCTCGCCGTCGCGTCCT CCGCGCTCGTCACCCTGCTCGCGGCGGCGCTCATGCAGTAGACGACGACGCGACGACTCC GGCTTCTCCCGCGCGCGTGGCTCCGGATTTGGTTGCGTCGATCGAGCTGCGATCAAATCA TGCATAGTTGGTTTCTTTCTTCTTTATTATAATTCCTTCTTCTTTGGGGGAGAGAGAGAG AGATTATTGAGTGAGGGTAGTTTGATGTTGAGTGGTTCTTGTGCTCTTGATCTCGCTGAT GGACATTCTTTTCTGTGTACCATTTCTGTACCTCATTAATTACTACTACTACTATGTGCC TTCATTCGTATGAATAAATCCGGATCATTTCATCTTCTGAAATGATCCGTTTGCACCAGC AAAAAAATAAAATAGATTGTTGTTTGTGGTGG



consensusID : consensus_14796#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 412
fasta sequence
                              [CGGGCGCGGCCCCGGGAGCGCGTCCCCAGCTCCCCTGTCGCGTCACTCCGCAGCTCGTCACCCTGCTCAGCCAGGCAGGCAGCTCATCGCAGTAGACGACGACGCGACAGACTCCGGCTTTCTCCCGCGCGCGTGGCTCCGGATTTGGTTGCGTCGATCGAGCTGCGATCAAAATCAATGCATAGTTGGTTTCTTTCTTCTTTATTATAATTCCTTCTTCTTTGGGGGAGAGAGAGAGAGAGATTATTGAGTGAGGTTATTTTGATGTTGAGTGGTTCTTGTGCTCTGATCTCCTGATGGACATTCTTTTCGGGGTACCATTTCGGTACCTCATTAATTACTACTACTACTATGTCCCTTCATTCGTATGAATAAATCCGGATCATTTCATCTTCTGAAAGGACCGTTGCAC]

[+] EMBL BI802436             [CGGGCGCGGCCCCGGGAGCGCGTCCCCAGCTCCCCTGTCGCGTCACTCCGCAGCTCGTCACCCTGCTCAGCCAGGCAGGCAGCTCATCGCAGTAGACGACGACGCGACAGACTCCGGCTTTCTCCCGCGCGCGTGGCTCCGGATTTGGTTGCGTCGATCGAGCTGCGATCAAAATCAATGCATAGTTGGTTTCTTTCTTCTTTATTATAATTCCTTCTTCTTTGGGGGAGAGAGAGAGAGAGATTATTGAGTGAGGTTATTTTGATGTTGAGTGGTTCTTGTGCTCTGATCTCCTGATGGACATTCTTTTCGGGGTACCATTTCGGTACCTCATTAATTACTACTACTACTATGTCCCTTCATTCGTATGAATAAATCCGGATCATTTCATCTTCTGAAAGGACCGTTGCAC]


>consensus_14796#1 CGGGCGCGGCCCCGGGAGCGCGTCCCCAGCTCCCCTGTCGCGTCACTCCGCAGCTCGTCA CCCTGCTCAGCCAGGCAGGCAGCTCATCGCAGTAGACGACGACGCGACAGACTCCGGCTT TCTCCCGCGCGCGTGGCTCCGGATTTGGTTGCGTCGATCGAGCTGCGATCAAAATCAATG CATAGTTGGTTTCTTTCTTCTTTATTATAATTCCTTCTTCTTTGGGGGAGAGAGAGAGAG AGATTATTGAGTGAGGTTATTTTGATGTTGAGTGGTTCTTGTGCTCTGATCTCCTGATGG ACATTCTTTTCGGGGTACCATTTCGGTACCTCATTAATTACTACTACTACTATGTCCCTT CATTCGTATGAATAAATCCGGATCATTTCATCTTCTGAAAGGACCGTTGCAC



consensusID : consensus_14796#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 357
fasta sequence
                              [GTGATTTGAGTCTCCTCTCGCTCGCGTCGGGCTACGTGCTACGTTTTTCTTCTTCTTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGNGCCGGCCTCCTCGCCGGCGACGTCGCCGATGGCCGGGGCGGCGACCGGTGAGCGCGTNCCCGCTNGNCGTCGNGTCCTCCGCGNTCGTCAACCCTGCTCGAGGGNGGTGGNTCATGNAGTAAGACGACGACGTGACGACTACGGNTTTTTCCCGNGNGNGGTGGATCCGNAATTTNGTTTGCNGTNGATCGAGGTTGTGATCAA]

[+] EMBL OSC20951             [GTGATTTGAGTCTCCTCTCGCTCGCGTCGGGCTACGTGCTACGTTTTTCTTCTTCTTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGNGCCGGCCTCCTCGCCGGCGACGTCGCCGATGGCCGGGGCGGCGACCGGTGAGCGCGTNCCCGCTNGNCGTCGNGTCCTCCGCGNTCGTCAACCCTGCTCGAGGGNGGTGGNTCATGNAGTAAGACGACGACGTGACGACTACGGNTTTTTCCCGNGNGNGGTGGATCCGNAATTTNGTTTGCNGTNGATCGAGGTTGTGATCAA]


>consensus_14796#2 GTGATTTGAGTCTCCTCTCGCTCGCGTCGGGCTACGTGCTACGTTTTTCTTCTTCTTCTT CGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCT CCTCGTGATGGCGTCGGCGCAGGAATTCAACGNGCCGGCCTCCTCGCCGGCGACGTCGCC GATGGCCGGGGCGGCGACCGGTGAGCGCGTNCCCGCTNGNCGTCGNGTCCTCCGCGNTCG TCAACCCTGCTCGAGGGNGGTGGNTCATGNAGTAAGACGACGACGTGACGACTACGGNTT TTTCCCGNGNGNGGTGGATCCGNAATTTNGTTTGCNGTNGATCGAGGTTGTGATCAA



consensusID : consensus_14796#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 308
fasta sequence
                              [TGTGATTTGAGTCTCCTCTCGCTCGCGTCGGGCTACGTGCTACGTTTTTCTTCTTCTTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGGCCGGSCTTCTCRVMGGVVCGTCGCCGAWTGGCCGGGGCSGCGCCCGGGAAGCNCGTWCCCDGCWANVCGTCGCGTWCTCCGAGCHNCGTDAACCCTGCKCHGCAGGGSGGCGCKCAYTGCMSGTATGACCACCGACNCCGACGACTCCCGGS]

[+] EMBL AA752705             [TGTGATTTGAGTCTCCTCTCGCTCGCGTCGGGCTACGTGCTACGTTTTTCTTCTTCTTCTTCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGGCCGGSCTTCTCRVMGGVVCGTCGCCGAWTGGCCGGGGCSGCGCCCGGGAAGCNCGTWCCCDGCWANVCGTCGCGTWCTCCGAGCHNCGTDAACCCTGCKCHGCAGGGSGGCGCKCAYTGCMSGTATGACCACCGACNCCGACGACTCCCGGS]


>consensus_14796#3 TGTGATTTGAGTCTCCTCTCGCTCGCGTCGGGCTACGTGCTACGTTTTTCTTCTTCTTCT TCGTCGGGTTTACGATGGCTCCCCGCGTGGCGGTGCTGCTGATGGCCGTGGCCTCATCGC TCCTCGTGATGGCGTCGGCGCAGGAATTCAACGCGGCCGGSCTTCTCRVMGGVVCGTCGC CGAWTGGCCGGGGCSGCGCCCGGGAAGCNCGTWCCCDGCWANVCGTCGCGTWCTCCGAGC HNCGTDAACCCTGCKCHGCAGGGSGGCGCKCAYTGCMSGTATGACCACCGACNCCGACGA CTCCCGGS



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14796#2      -------------------GTGATTTGAG-TCTCCTCTCGC-TCGCGTCGGGCTACGT-G 38
consensus_14796#3      ------------------TGTGATTTGAG-TCTCCTCTCGC-TCGCGTCGGGCTACGT-G 39
consensus_14796#0      ---------ACGACGCTTTGTGATTTGAG-TCTCCTCTCGC-TCGCGTCGGGCTACGT-G 48
consensus_14796#1      CGGGCGCGGCCCCGGGAGCGCGTCCCCAGCTCCCCTGTCGCGTCACTCCGCAGCTCGTCA 60
                                          * *     ** ** *** **** ** *  **     ***  

consensus_14796#2      CTACGTTTTTCTTCTTCTTC--TTCGTCG-GGTTTACGATGGCTCCCCGCGTGGCGGTGC 95
consensus_14796#3      CTACGTTTTTCTTCTTCTTC--TTCGTCG-GGTTTACGATGGCTCCCCGCGTGGCGGTGC 96
consensus_14796#0      CTACGTTTTTCTTCTTCTTC--TTCGTCG-GGTTTACGATGGCTCCCCGCGTGGCGGTGC 105
consensus_14796#1      CCCTGCTCAGCCAGGCAGGCAGCTCATCGCAGTAGACGACGACGCGACAGACTCCGGCTT 120
                       *   * *   *        *   ** ***  **  **** * * *  *      ***   

consensus_14796#2      TG-CTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAG--GAATTCAACG 152
consensus_14796#3      TG-CTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAG--GAATTCAACG 153
consensus_14796#0      TG-CTGATGGCCGTGGCCTCATCGCTCCTCGTGATGGCGTCGGCGCAG--GAATTCAACG 162
consensus_14796#1      TCTCCCGCGCGCGTGGCTCCGGATTTGGTTGCGTCGATCGAGCTGCGATCAAAATCAATG 180
                       *  *    *  ******  *     *  * * *  *     *  **     ** **** *

consensus_14796#2      NG---CCGGCCTCCT----CGCCGGCGACGTCGCCGAT-GGCCGGGGCGGCGACCGGTGA 204
consensus_14796#3      CGG--CCGGSCTTCT----CRVMGGVV-CGTCGCCGAWTGGCCGGGGCSGCGCCCGGGAA 206
consensus_14796#0      CG---CCGGCCTCCT----CGCCGGCGCCGTCGCCGAT-GGCCGGGGCGGCGCCCGG-GA 213
consensus_14796#1      CATAGTTGGTTTCTTTCTTCTTTATTATAATTCCTTCTTCTTTGGGGGAGAGAGAGAGAG 240
                              **  *  *    *          *  *         ****  * *   *    

consensus_14796#2      GCGCGTNCCCG-CTNGNCGTCGNG-TCCTCCGCGNTC-GTCAACCCTGCTCGAGGGNGGT 261
consensus_14796#3      GCNCGTWCCCDGCWANVCGTCGCG-TWCTCCGAGCHNCGTDAACCCTGCKC-HGCAGGGS 264
consensus_14796#0      GCGCGTCCCCG-CTCGCCGTCGCG-TCCTCCGCGCTC--GTCACCCTGCTC--GCGGCGG 267
consensus_14796#1      AGATTATTGAGTGAGGTTATTTTGATGTTGAGTGGTTCTTGTGCTCTGATCTCCTGATGG 300
                                          *   * *  *  * *         * ***  *       * 

consensus_14796#2      GGNTCATGNAGTAAG-ACGACGACGTGACGACTACGGNTTTTTCCCGNGNGNGGTGGATC 320
consensus_14796#3      GGCGCKCAYTGCMSGTATGACCAC-CGACNCCGACGACT----CCCGGS----------- 308
consensus_14796#0      CGCTCATGCAGTAG--ACGACGACGCGACGACTCCGGCTTCT-CCCGCGCGCGTGGCTCC 324
consensus_14796#1      ACATTCTTTTCGGGGTACCATTTCGGTACCTCATTAATTACTACTACTACTATGTCCCTT 360
                                       *  *   *   **  *      *    *                

consensus_14796#2      CGNAATTTNGTTTGCNGTNGATCGAGGTTGTGATCAA----------------------- 357
consensus_14796#3      ------------------------------------------------------------
consensus_14796#0      GGATTTGGTTGCGTCGATCGAGCTGCGATCAAATCATGCATAGTTGGTTTCTTTCTTCTT 384
consensus_14796#1      CATTCGTATGAATAAATCCGGATCATTTCATCTTCTGAAAGGACCGTTGCAC-------- 412
                                                                                   

consensus_14796#2      ------------------------------------------------------------
consensus_14796#3      ------------------------------------------------------------
consensus_14796#0      TATTATAATTCCTTCTTCTTTGGGGGAGAGAGAGAGAGATTATTGAGTGAGGGTAGTTTG 444
consensus_14796#1      ------------------------------------------------------------
                                                                                   

consensus_14796#2      ------------------------------------------------------------
consensus_14796#3      ------------------------------------------------------------
consensus_14796#0      ATGTTGAGTGGTTCTTGTGCTCTTGATCTCGCTGATGGACATTCTTTTCTGTGTACCATT 504
consensus_14796#1      ------------------------------------------------------------
                                                                                   

consensus_14796#2      ------------------------------------------------------------
consensus_14796#3      ------------------------------------------------------------
consensus_14796#0      TCTGTACCTCATTAATTACTACTACTACTATGTGCCTTCATTCGTATGAATAAATCCGGA 564
consensus_14796#1      ------------------------------------------------------------
                                                                                   

consensus_14796#2      ------------------------------------------------------------
consensus_14796#3      ------------------------------------------------------------
consensus_14796#0      TCATTTCATCTTCTGAAATGATCCGTTTGCACCAGCAAAAAAATAAAATAGATTGTTGTT 624
consensus_14796#1      ------------------------------------------------------------
                                                                                   

consensus_14796#2      --------
consensus_14796#3      --------
consensus_14796#0      TGTGGTGG 632
consensus_14796#1      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)