cluster # 14882

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Oryza sativa
cluster # 14882 cluster # 14882 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_14882#0 length = 1100 sequences # 11
consensus_14882#1 length = 1090 sequences # 5

consensus_14882#2 length = 276 sequences # 1
consensus_14882#3 length = 239 sequences # 1

consensusID : consensus_14882#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1100
fasta sequence

                              [GGCATGCGCGAGCGCGACCCCTCCCCCTCGAACCGCCGCGACCTTCTCGATGCTTCCCAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAAT-CCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT-CCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAGACAAGACACAAATTGATATTATTCAAGGA-CATGATG-TCTTTTTAAAAAAAAAAAATTGCGCTGTTAAAAA]

[+] EMBL AK069405             [GGCATGCGCGAGCGCGACCCCTCCCCCTCGAACCGCCGCGACCTTCTCGATGCTTCCCAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAAT CCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAGACAAGACACAAATTGATATTATTCAAGGA CATGATG TCT                               ]
[+] EMBL AK104151             [            CGCGACCCCTCCCCCTCGAACCGCCGCGACCTTCTCGATGCTTCCCAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAAT CCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAGACAAGACACAAATTGATATTATTCAAGGA CATGATG TCT                               ]
[+] EMBL AK104209             [            CGCGACCCCTCCCCCTCGAACCGCCGCGACCTTCTCGATGCTTCCCAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAAT CCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCA                                                                         ]
[+] EMBL CF291134             [                                     GCGACCTTCTCGATGCTTCCCAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C99359               [                                                                                                                                                                            CATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAAT CCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCAGACAGACACGAA TCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGANGAGCAATCTCATCTCGGNTTCCTTGTGTA                                                                                                                                                                                     ]
[+] EMBL BP184480             [                                                                                                                                                                                                                                                                                                                    GTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAAT CCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGAC GGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGC                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF334893             [                                                                                                                                                                                                                                                                                                                                                                TGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAGGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAAaaaaa                                                                           ]
[+] EMBL C99360               [                                                                                                                                                                                                                                                                                                                                                                                                                              ATGAAGATGGAATGTANCCTGACCAGGTGGATTGGATTGCCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAAT CCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAGACAAGACACAAATTGATATTATTCAAGGA CATGATG TCTTTTTAAAAAAAAAAAA               ]
[-] EMBL CF334802             [                                                                                                                                                                                                                                                                                                                                                                                                                                        AATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAAT CCTAACCATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAGGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAAaaaaa                                                                           ]
[-] EMBL CF291133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCT CCCAACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAGACAAGACACAAATTGATATTATTCAAGGACCATGATG TCTTTTTAAAAAAA                    ]
[-] EMBL CF336730             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ATACTGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCTCCCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGTTCACCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAGACAAGACACAAACTGATATTATTCAAGGA CATGATGTTCTTTTTAAAATGAAATCCTTGCGCTGTTAAAAA]




>consensus_14882#0
GGCATGCGCGAGCGCGACCCCTCCCCCTCGAACCGCCGCGACCTTCTCGATGCTTCCCAA
ATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGA
GCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCT
ACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGG
AAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAG
ATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGC
CAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAG
ATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCA
AAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACC
ATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGT
ATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAG
ACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCTCCAGACAGACACGA
AGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGA
CAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAG
ACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATC
TCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTG
TGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAACTCCTATTGAAATCAGTG
AATTGTTCAGACAAGACACAAATTGATATTATTCAAGGACATGATGTCTTTTTAAAAAAA
AAAAATTGCGCTGTTAAAAA

consensusID : consensus_14882#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1090
fasta sequence

                              [TTCGCCCTTGGACACTGACATGACTGAAGGAGTAGAAAAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAA-GGTGGGA-GGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCA-GGTGGA-TTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACCATCCACTGAACAGCCTAGGCAATGGCAA-TATACT-GGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGCCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCTCCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGNTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGNGTATTGGATATTTTGGATGTATATCTTCGTGGTTAGTGAGTTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGNTTCCTGNAAACTNCTATTGNAATCAGNGNATTGGTCAGACAAGACACAAATTGATNTTATTCAAGGACATGATGNCCTTTTTAAAANGAAAAAAAAAAAAAAAAAAAAGCGGNCGG]

[+] EMBL CF334801             [TTCGCCCTTGGACACTGACATGACTGAAGGAGTAGAAAAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAA GGTGGGA GGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCA GGTGGA TTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACCATCCACTGAACAGCCTAGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF334892             [ TCGCCCTTGGACACTGACATGACTGAAGGAGTAGAAAAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAA GGTGGGA GGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGGTGGA TTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACCATCCACTGAACAGCCTAGGCAATGGCAA TATACT GGGTTTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF314927             [                   tgGACTGAA GAGTAGAAA     CTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCC TGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAA GGTGGGA GGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCA GGTGGA TTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACCATCCACTGAACAGCCTAGGCAATGGCAANTATACT  GGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGCCCTGGTGGTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF336729             [                                                   CGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCAGGTTTTGACCCTAGCAAAGGGTGGGAGGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCA GGTGGATTTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACCATCCACTGAACAGCCTAGGCAATGGCAA TATACTGGGGTTTGGAAGCGCAAGTCAGAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB097163             [                                                                                                                                                                                                                                                        TGATGTTTACATTGCTGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAA GGTGGGA GGCCTGAGTTTTACCATGAAGATGGAATGTATCCTGAGCA GGTGGA TTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACCATCCACTGAACAGCCTAGGCAATGGCAA TATACT  GGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGCCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCTCCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGNTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGNGTATTGGATATTTTGGATGTATATCTTCGTGGTTAGTGAGTTGTGAAGTTGTAGTTTGCTGTAATTCGTCATCGNTTCCTGNAAACTNCTATTGNAATCAGNGNATTGGTCAGACAAGACACAAATTGATNTTATTCAAGGACATGATGNCCTTTTTAAAANGAAAAAAAAAAAAAAAAAAAAGCGGNCGG]




>consensus_14882#1
TTCGCCCTTGGACACTGACATGACTGAAGGAGTAGAAAAAATCCTCCTCCTCGTGAACTC
GTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTC
CTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGG
TCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGT
GGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTT
CAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTT
GACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAG
GTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCAT
ATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACCATCCACTGAACAGCCTAGGC
AATGGCAATATACTGGGTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGT
CCCTTATACAATAATAAGCCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTT
GATTGTTGGCAATGACGATGAACTTCTCCAGACAGACACGAAGTCAATTCCAAGAGCTGA
TGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGACAAAGTTCAAGGCATTTGA
TTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGNTCTC
CCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGNG
TATTGGATATTTTGGATGTATATCTTCGTGGTTAGTGAGTTGTGAAGTTGTAGTTTGCTG
TAATTCGTCATCGNTTCCTGNAAACTNCTATTGNAATCAGNGNATTGGTCAGACAAGACA
CAAATTGATNTTATTCAAGGACATGATGNCCTTTTTAAAANGAAAAAAAAAAAAAAAAAA
AAGCGGNCGG

consensusID : consensus_14882#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 276
fasta sequence

                              [GAATGTATCCTATACTGGTTGGAGCGCAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCTCCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCACRGCCCTGCAGTATGWAAGAGACAAAGTTCAAGGCAHTTTKATTTTGGCTTCAAAGCCTGAAGGSACAGGCACACCCA]

[+] EMBL AA752624             [GAATGTATCCTATACTGGTTGGAGCGCAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCTCCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCACRGCCCTGCAGTATGWAAGAGACAAAGTTCAAGGCAHTTTKATTTTGGCTTCAAAGCCTGAAGGSACAGGCACACCCA]




>consensus_14882#2
GAATGTATCCTATACTGGTTGGAGCGCAGTCAGAACAGTATTTGGCAGACAGTGGAGTCC
CTTATACAATAATAAGGCCTGGTGGCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGAT
TGTTGGCAATGACGATGAACTTCTCCAGACAGACACGAAGTCAATTCCAAGAGCTGATGT
TGCTGAAGTTTGTGTTCACRGCCCTGCAGTATGWAAGAGACAAAGTTCAAGGCAHTTTKA
TTTTGGCTTCAAAGCCTGAAGGSACAGGCACACCCA

consensusID : consensus_14882#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 239
fasta sequence

                              [AGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTGGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTAATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAAACAAGACACGAATTGATATTATTCAAGGACATGATGTCTTTTTAAAAGAAAAAAAAAAAAAACACTGTCA]

[-] EMBL CF291268             [AGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTGGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAATTCGTAATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAAACAAGACACGAATTGATATTATTCAAGGACATGATGTCTTTTTAAAAGAAAAAAAAAAAAAACACTGTCA]




>consensus_14882#3
AGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGTGTA
TTGGATATTTGGATGTATATCTTGGTGGTTAGTGAGGTGTGAAGTTGTAGTTTGCTGTAA
TTCGTAATCGTTTCCTGAAAACTCCTATTGAAATCAGTGAATTGTTCAAACAAGACACGA
ATTGATATTATTCAAGGACATGATGTCTTTTTAAAAGAAAAAAAAAAAAAACACTGTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14882#0      GGCATGCGCGAGCGCGACCCCTCCCCCTCGAACCGCCGCGACCTTCTCGATGCTTCCCAA 60
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      ------------------------------------------------------------
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGTCTCGATCTCCATGGCGGACTCGA 120
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      ------------------------------------------------------------
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      GCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGGCGGCCGCACAGGAAACATTGTCT 180
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      ------------------------------------------------------------
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGTGAGAGGTTTAGTGAGAACAGAGG 240
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      ------------------------------------------------------------
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      AAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTACATTGCCGACATAAGGGACAGAG 300
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      -------------------------------------------TTCGCCCTTGGACACTG 17
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCTCATAATCCTCACGAGTGCTGTGC 360
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      ACATGACTGAAGGAGTAGAAAAAATCCTCCTCCTCGTGAACTCGTCGCCTTCGTCTTCGT 77
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      CAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGGGAGGCCTGAGTTTTACTATGAAG 420
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      CTCGATCTCCATGGCGGACTCGAGCGCGGCCCGCCCCACCGTCCTCGTCACCGGCGCCGG 137
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCAAAAGAATCAGATTGACACTGCCA 480
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      CGGCCGCACAGGAAACATTGTCTACAACAAGCTCAAGGAAAGGTCTGACCAGTTTGTTGT 197
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      AAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATCCATGGGAGGAACAAATCCTAACC 540
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      GAGAGGTTTAGTGAGAACAGAGGAAAGCAAACAAAAGATTGGTGGAGGCAATGATGTTTA 257
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ATCCACTGAACAGCCTAGGCAATGGCAATATACTGGTTTGGAAGCGCAAGTCAGAACAGT 600
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      CATTGCCGACATAAGGGACAGAGATCATCTTGTGCCTGCTGTTCAAGGTGTCGATGCGCT 317
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ATTTGGCAGACAGTGGAGTCCCTTATACAATAATAAGGCCTGGTGGTCTGCAAGACAAAG 660
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      CATAATCCTCACGAGTGCTGTGCCAAAGATGAAACCTGGTTTTGACCCTAGCAAAGGTGG 377
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ACGGGGGAGTGAGGGAGTTGATTGTTGGCAATGACGATGAACTTCTCCAGACAGACACGA 720
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      GAGGCCTGAGTTTTACTATGAAGATGGAATGTATCCTGAGCAGGTGGATTGGATTGGCCA 437
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      AGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTGTGTTCAGGCCCTGCAGTATGAAGAGA 780
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      AAAGAATCAGATTGACACTGCCAAAGCTGCTGGAGTGAAGCATATCGTGCTTGTGGGATC 497
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      CAAAGTTCAAGGCATTTGATTTGGCTTCAAAGCCTGAAGGCACAGGCACACCAACAAAAG 840
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      CATGGGAGGAACAAATCCTAACCATCCACTGAACAGCCTAGGCAATG-GCAATATACTGG 556
consensus_14882#2      ------------------------------------------GAATGTATCCTATACTGG 18
                                                                                   

consensus_14882#0      ACTTCAAATCGTTGTTCTCCCAGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATC 900
consensus_14882#3      ---------------------AGGTTACAGCCCGATTTTGAGCCATCTTGAGGAGCAATC 39
consensus_14882#1      GTTTGGAAGCGCAAGTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATA 616
consensus_14882#2      TT---GGAGCGCA-GTCAGAACAGTATTTGGCAGACAGTGGAGTCCCTTATACAATAATA 74
                                              **    * * **   **      ***    *  *** 

consensus_14882#0      TCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTCGTGGTTAGTGAGGTG 960
consensus_14882#3      TCATCTCGGTTTCCTTGTGTATTGGATATTTGGATGTATATCTTGGTGGTTAGTGAGGTG 99
consensus_14882#1      AGCCCTGGTGGTCTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATG-A 675
consensus_14882#2      AGGCCTGGTGG-CTGCAAGACAAAGACGGGGGAGTGAGGGAGTTGATTGTTGGCAATG-A 132
                           ** *    *     *     **     *  **      **  * *** *  * *  

consensus_14882#0      TGAAGTTGTAGTTTGCTGTAATTCGTCATCGTTTCCTGAAAAC--TCCTATTGAAATCAG 1018
consensus_14882#3      TGAAGTTGTAGTTTGCTGTAATTCGTAATCGTTTCCTGAAAAC--TCCTATTGAAATCAG 157
consensus_14882#1      CGATGAACTTCTCCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTG 735
consensus_14882#2      CGATGAACTTCTCCAGACAGACACGAAGTCAATTCCAAGAGCTGATGTTGCTGAAGTTTG 192
                        ** *   *  *        *  **   **  ****   *     *  *  **** *  *

consensus_14882#0      TGAATT-GTTCAGACAAGACACAAATTGATATTATTCAAGGACATGATGTCTT--TTTAA 1075
consensus_14882#3      TGAATT-GTTCAAACAAGACACGAATTGATATTATTCAAGGACATGATGTCTT--TTTAA 214
consensus_14882#1      TGTTCA-GGCCCTGCAGTATGAA-GA-GACAAAGTTCAAGGCATTT--GATTTGGCTTCA 790
consensus_14882#2      TGTTCACRGCCCTGCAGTATGWAAGA-GACAAAGTTCAAGGCAHTTTKATTTTGGCTTCA 251
                       **        *   **  *        ** *   *******   *      **   ** *

consensus_14882#0      AA----AAAAAAAATTGCGCTGTTAAAAA------------------------------- 1100
consensus_14882#3      AAGAAAAAAAAAAAAAACACTGTCA----------------------------------- 239
consensus_14882#1      AAGCCTGAAGGCACAGGCACACCAACAAAAGACTTCAAATCGTTGNTCTCCCAGGTTACA 850
consensus_14882#2      AAGCCTGAAGGSACAGGCACACCCA----------------------------------- 276
                       **     **   *    * *    *                                   

consensus_14882#0      ------------------------------------------------------------
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      GCCCGATTTTGAGCCATCTTGAGGAGCAATCTCATCTCGGTTTCCTTGNGTATTGGATAT 910
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ------------------------------------------------------------
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      TTTGGATGTATATCTTCGTGGTTAGTGAGTTGTGAAGTTGTAGTTTGCTGTAATTCGTCA 970
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ------------------------------------------------------------
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      TCGNTTCCTGNAAACTNCTATTGNAATCAGNGNATTGGTCAGACAAGACACAAATTGATN 1030
consensus_14882#2      ------------------------------------------------------------
                                                                                   

consensus_14882#0      ------------------------------------------------------------
consensus_14882#3      ------------------------------------------------------------
consensus_14882#1      TTATTCAAGGACATGATGNCCTTTTTAAAANGAAAAAAAAAAAAAAAAAAAAGCGGNCGG 1090
consensus_14882#2      ------------------------------------------------------------