These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14902#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1864 fasta sequence [ACAACCGAGAGCTCGCTAGTCGTCGTCCTCGAAACGCTCGCGGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAGGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGGAAGCTTCACTAGCTTGGGCTGTAGTGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTGGAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAAACAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATCGAATGGAGCTCCATGAGTTGACAGATTCCTCAGAGACGTCACAGTTGCTTTCTGCTAAGAAAACCAACCCTGCTGCTCATTCTAGC-AAACCGAGATTGGGGGCCGCAATGCGATTTTAAAGCTTCTGTCCCCAAATTTAATTAGATCTAGTCTTCTTCTTTGGACTGTCTTTCTTGGTCATGCCTTCTTATACTACGGTCTTGTTCTACTAACCTCGGAATTGAGTCATGGAAATAAGATTTGTGGATCAGAGGGGATAGTAACAATGCAAACAAACCACTCAAACGATGCTAATCTGTACAGAAACGTGTTCATCACTAGCTTTGGAGAGGTTCCTGGCATTATACTATCTGCGGCAATAGTGGACAAGATTGGGCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCATAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATCTTCCTGTTCGGTGCAC-GCATTTGCATCTCCGCA--AGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTG-CCCTCTTGTGGCCGTTGGTTTGGTGCA-CGCGT-GCCATCAGACTGCA-G-CCA-T-CCTGATATTCAT-CACGGTGATGC-TCGTCT-CAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGCGTAAGAGCTAAGTTGCGAGCAGAATCTGACAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAATTACAGGATTGAGCTCCTAGAGGCCATTCAGA--TTTTTTTTTTCTTTCAGTTCGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTGCCAAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGATGATCAATATGTTTTGAAGGAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK071542 [ACAACCGAGAGCTCGCTAGTCGTCGTCCTCGAAACGCTCGCGGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAGGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGGAAGCTTCACTAGCTTGGGCTGTAGTGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTGGAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAAACAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATCGAATGGAGCTCCATGAGTTGACAGATTCCTCAGAGACGTCACAGTTGCTTTCTGCTAAGAAAACCAACCCTGCTGCTCATTCTAGC AAACCGAGATTGGGGGCCGCAATGCGATTTTAAAGCTTCTGTCCCCAAATTTAATTAGATCTAGTCTTCTTCTTTGGACTGTCTTTCTTGGTCATGCCTTCTTATACTACGGTCTTGTTCTACTAACCTCGGAATTGAGTCATGGAAATAAGATTTGTGGATCAGAGGGGATAGTAACAATGCAAACAAACCACTCAAACGATGCTAATCTGTACAGAAACGTGTTCATCACTAGCTTTGGAGAGGTTCCTGGCCTTATACTATCTGCGGCAATAGTGGACAAGATTGGGCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCATAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATCTTCCTGTTCGGTGCAC GCATTTGCATCTCCGCA AGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTG CCCTCTTGTGGCCGTTGGTTTGGTGCA CGCGT GCCATCAGACTGCA G CCA T CCTGATATTCAT CACGGTGATGC TCGTCT CAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGCGTAAGAGCTAAGTTGCGAGCAGAATCTGACAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAGTTACAGGATTGAGCTCCTAGAGGCCATTCAGA TTTTTTTTTTCTTTCAGTTCGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTGCCAAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGATGATCAATAT ] [+] EMBL CF322967 [ AATAATGGAAGCTTCACTAGCTTGGGCTGTAATGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATTATTTGCTCTACTACTGTTCTATCCACTGACACTGGAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAAACAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATCGAATGGAGCTCCATGAGTTGACAGATTCCTCAGAGACATCACAGTTGCTTTCTGCTAAGAAAACCAACCCTGCTGCTCATTCTAGCAAAACCGAGATTGGGGGCCGCAATGCGATTTTAAAGCTTCTGTCCCCAAATTTAATTAGATCTAGTCTTCTTCTTTGGACTGTCTTTCTTGGTCATGCCTTCTTATACTACGGTCTTGTTCTACTAACCTCGGAATTGAGTCATGGAAATAAGATTTGTGGATCAGAGGGGATAGTAACAATGCAAACAAACCACTCAAACGATGCTAATCTGTACAGAAACGTGTTCATC ] [-] EMBL CB621628 [ ATGGAAATAAGATTTGTGGATCAGAGGGGATAGTAACAATGCAAACAAACCACTCAAACGATGCTAATCTGTACAGAAACGTGTTCATCACTAGCTTTGGAGAGGTTCCTGGCATTATACTATCTGCGGCAATAGTGGACAAGATTGGGCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCATAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATCTTCCTGTTCGGTGCAC GCATTTGCATCTCCGCA AGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTG CCCTCTTGTGGCCGTTGGTTTGGTGCA CGCGT GCCATCAGACTGCA G CCA T CCTGATATTCAT CACGGTGATGC TCGTCT CAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGCGTAAGAGCTAAGTTGCGAGCAGAATCTGACAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAATTACAGGATTGAGCTCCTAGAGGCCATTCAGA TTTTTTTTCTTTCAGTACGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTGCCAAATCGAGATGCTTCCTTTTCTCACGTGAAATGGGACGATCAATAT ] [-] EMBL CB621490 [ ATAAGATTTGTGGATCAGAGGGGATAGTAACAATGCAAACAAACCACTCAAACGATGCTAATCTGTACAGAAACGTGTTCATCACTAGCTTTGGAGAGGTTCCTGGCATTATACTATCTGCGGCAATAGTGGACAAGATTGGGCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCATAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATCTTCCTGTTCGGTGCAC GCATTTGCATCTCCGCA AGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTG CCCTCTTGTGGCCGTTGGTTTGGTGCA CGCGT GCCATCAGACTGCA G CCA T CCTGATATTCAT CACGGTGATGC TCGTCT CAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGCGTAAGAGCTAAGTTGCGAGCAGAATCTGACAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAATTACAGGATTGAGCTCCTAGAGGCCATTCAGA TTTTTTTTCTTTCAGTACGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTGCCAAATCGAGATGCTTGCTTTTCTTACGGGAAATGGGACGATCAATATTTTTGGAAGGccctaa ] [-] EMBL CB618686 [ ACGTGTTCATCACTAGCTTTGGAGAGGTTCCTGGCATTATACTATCTGCGGCAATAGTGGACAAGATTGGGCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCATAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATTTTCCTGTTCGGTGCAC GCATTTGCATCTCCGCA AGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTG CCCTCTTGTGGCCGTTGGTTTGGTGCA CGCGT GCCATCAGACTGCA G CCA T CCTGATATTCAT CACGGTGATGC TCGTTT CAGGTGTTGCAGTTTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGCGTAAGAGCTAAGTTGCGAGCAGAATTTGACAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAATTACAGGATTGAGCTCCTAGAGGCCATTCAGA TTTTTTTTCTTTCAGTACGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAAGGGCATTACATTGTTTTAACCAGACATATGTAAACTGCCAAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGACGATCAATATGT ] [+] EMBL AU071259 [ GCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCATAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATCTTCCTGTTCGGTGCAC GCATTTGCATCTCCGCA AGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTG CCCTCTTGTGGCCGTTGGTTTGGTGCA CGCGT GCCATCAGACTGCA G CCA T CCTGATATTCAT CACGGTGATGC TCGTCT CAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGTGTAAGAGCTAAGTTGCGAGCAGAATCTGACAGTGTTGCAAGTGCTAGTTTCTTTA ] [+] EMBL CF331574 [ AGTCCCTGACAACTATCTTCCTGTTCGGTGCAC GCATTTGCATCTCCGCA AGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAACCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTG CCCTCTTGTGGCCGTTGGTTTGGTGCA CGCGT GCCATCAGACTGCA G CCA T CCTGATATTCAT CACGGTGATGC TCGTCT CAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGCGTAAGAGCTAAGTTGCGAGCAGAATCTGACAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAATTACAGGATTGAGCTCCTAGAGGCCATTCAGA TTTTTTTTTTCTTTCAGTTCGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTGCCAAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGATGATC ] [+] EMBL BI806333 [ ccgTGTTCGGTGCACAGCATTTGCATCTCCGCACGAGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCC CCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCTTGTC CCCTCTTGT GCCCTTGGTTTGGTGCACCGCGT CCATCAGACT CA CCACT CCTGATATTCAT C CGGTGATGC TCGTCT CAGGTGTT CAGTCTCATACTTTCCCCTGGAAACCAGCGGCCGGAAATTGAGTGACCCCCTCGCGGCGTAAGAGCTAAGTTGCGA CNGAATCTGACCGTGTTGCCAGTGCTAGTTTCTTTAGCTATAC AAATTACCGGATTGAGCTCCTAGA GCCCTTCAGA TTTTTTTTTTCTTTC GTTCGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTC TTAC TTGTTTTAACC GACATATGTAAACT CC ATCGAGAT ] [+] EMBL AU101711 [ TTGCACATCTATGCCCNTGAGATATACCCANCCGCATTCAGGGCTACCGGAGTCGGGTTTTCGAGCTCAATCGCTCGTTTCGGTGGGACCTTGTGCCCCTCTTNTGGCCGTTGGTTTGGTGCA CGCGT GCCATCAGACTGCA GCCCA TCCCTGATATTCATCCACGGTGATGC TCGTCTCCAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAAGCGGCCGGAAATTGAGTGACCACATCGCGGTGTAAGAGCTAAGTTGCGAGCAGAATCTGACAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAATTACAGGATTGAGCTCCTAGAGGCCATTCAGATTTTTTTTTTTTCTTTCAGTTCGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTNCCAAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGATGATCAATATGTTTTGAAGGAAAAAAAAAAAAAAna ] [+] EMBL BM421333 [ TTGTTTTGGTGCA CGCGTGGCCATCAGACTGCATG CCA T CCTGATATTCAT CACGGTGATGCGTCGTCT CAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAATCGGCCGGAAATTGAGTGACCACATCGCGGCTTAAGAGCTAAGTTGCGAGCAGAATCTGACTGTGTTGCAAGTGCTAGTTTTTTTAGCTATACCAAATTACAGGATTGAGCTCCTAGAGGCCATTCAGA TTTTTTTTTCTTTCAGTACGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACCTTGTTTTAACCAGACATATGT AACTGCCCAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGATGATCCATATGTTTTGAAGGAAAAAAAAAA ] [+] EMBL AK121836 [ GCGGCGTAAGAGCTAAGTTGCGAGCAGAATCTGACAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAATTACAGGATTGAGCTCCTAGAGGCCATTCAGA TTTTTTTTTTCTTTCAGTTCGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTGCCAAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGATGATCAATAT ] [+] EMBL CF327077 [ AGCTATAC AAATTACAGGATTGAGCTCCTAGAGGCCATTCAGA TTTTTTTTTTCTTTCAGTTCGTTTAAAGATCATATATATAGAATAGAAATGAAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTGCCAAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGATGATCAATATGTTTTGAAGGAAAAAAAAAAAAAAAAAAAAAA ] [-] EMBL CF327076 [ GCTATACAAAATTACAGGATTGAGGTCCTAAAGGCCATTCAGA TTTTTTTTTTTTTTCAGGTCGTTTAAAGGTCATATATATAGAATAGAAATGAAAGATGGGGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAACTGCCCAATCGAGAAGCTTGCTTTGCTTTTTTGAAATGGGATGATCAATATGTTTTGAAGGAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_14902#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 809 fasta sequence [CCTAGAATTTCTGTATACGGAATTACGCGAAATTCGGCACGAGGGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCATACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCATGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGGAAGCTTCACTAGCTTGGGCTGTAATGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTGGAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAAACAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATC] [+] EMBL CB621489 [CCTAGAATTTCTGTATACGGAATTACGCGAAATTCGGCACGAGGGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCATACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCATGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGGAAGCTTCACTAGCTTGGGCTGTAATGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTGGAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAAACAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATC] [+] EMBL CB621627 [CCTAGAATTTCTGTATACGGAATTACGCGAAATTCGGCACGAGGGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCATACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCATGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGGAAGCTTCACTAGCTTGGGCTGTAATGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTGGAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAAA ] [+] EMBL CB621491 [CCTAGAATTTCTGTATACGGAATTACGCGAAATTCGGCACGAGGGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCATACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCATGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGG ] consensusID : consensus_14902#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 671 fasta sequence [TCGTCGTCCTCGAAACGCTCGCGGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGGAAGCTTCACTAGCTTGGGTAAATTTCTACATTTTGCCAAAGCTGTAATGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCA] [+] EMBL CB655236 [TCGTCGTCCTCGAAACGCTCGCGGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTTGGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGGAAGCTTCACTAGCTTGGGTAAATTTCTACATTTTGCCAAAGCTGTAATGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCA] consensusID : consensus_14902#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 554 fasta sequence [GTGTAGAAAATGGTCAACAACCGAGAGCTCGCTAGTCGTCGTCCTCGAAACGCTCGCGGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGG] [+] EMBL CF316755 [GTGTAGAAAATGGTCAACAACCGAGAGCTCGCTAGTCGTCGTCCTCGAAACGCTCGCGGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTTCGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTGGGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGGAAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGCAGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGGTTGGGTTCAATTTCACAGCCCTTGTAACTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGAGGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAATTCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTGGCACAATAATGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14902#0 ----------------ACAACCGAGAGCTCGCTAGTCGTCGTCCTCGAAA---CGCTCGC 41 consensus_14902#3 GTGTAGAAAATGGTCAACAACCGAGAGCTCGCTAGTCGTCGTCCTCGAAA---CGCTCGC 57 consensus_14902#2 -----------------------------------TCGTCGTCCTCGAAA---CGCTCGC 22 consensus_14902#1 ----------------------------CCTAGAATTTCTGTATACGGAATTACGCGAAA 32 * ** ** ** *** consensus_14902#0 GGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTT 101 consensus_14902#3 GGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTT 117 consensus_14902#2 GGCGACTCCGGTGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTT 82 consensus_14902#1 TTCGGCACGAGGGGCTGCCGCGCCGCCGCCTCCGGCCGCCGTACCAGCCTCACCTCGCTT 92 ** * * * ************************************************ consensus_14902#0 CGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTG 161 consensus_14902#3 CGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTG 177 consensus_14902#2 CGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTG 142 consensus_14902#1 CGATGGAGGATGGAGTGTCTACTTATACTGTTGATGAGGCTCTTATTTCCATGGGGTTTG 152 ************************************************************ consensus_14902#0 GGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGG 221 consensus_14902#3 GGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGG 237 consensus_14902#2 GGAAATTTCAAGCATTTGTGCTTGCGTACTCCGGAATGGCCAAGATATCTGAGGCAATGG 202 consensus_14902#1 GGAAATTTCAAGCATTTGTGCTTGCATACTCCGGAATGGCCAAGATATCTGAGGCAATGG 212 ************************* ********************************** consensus_14902#0 AAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAGGCTGAATGGGAGCTTTCTGCGC 281 consensus_14902#3 AAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGC 297 consensus_14902#2 AAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGC 262 consensus_14902#1 AAATGATGCTTTTGTCATTTGTTGGACAGTCGGTTCAAGCTGAATGGGAGCTTTCTGCGC 272 ************************************* ********************** consensus_14902#0 AGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTT 341 consensus_14902#3 AGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGG----------------------- 334 consensus_14902#2 AGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTT 322 consensus_14902#1 AGGCAGAATCTCTCATCACAAGTGTTGTTTTTGTAGGTATGCTTGTAGGAGCATATTCTT 332 ************************************* consensus_14902#0 GGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAA 401 consensus_14902#3 --------------------------------GTTGGGTTCAATTTCACAGCCCTTGTAA 362 consensus_14902#2 GGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAA 382 consensus_14902#1 GGGGCATAGTCTCAGACAACTATGGGAGAAGGGTTGGGTTCAATTTCACAGCCCTTGTAA 392 **************************** consensus_14902#0 CTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGA 461 consensus_14902#3 CTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGA 422 consensus_14902#2 CTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCGTGCTGA 442 consensus_14902#1 CTGGTGGGGCTGGTCTTCTTAGTGCATTTGCACCAAATTACCTTTCTTTGATCATGCTGA 452 ***************************************************** ****** consensus_14902#0 GGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAAT 521 consensus_14902#3 GGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAAT 482 consensus_14902#2 GGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAAT 502 consensus_14902#1 GGTTTATGGTTGGTGTTGGACTGGGTGGTGGACCAGTTTTATCTTCCTGGTTTTTGGAAT 512 ************************************************************ consensus_14902#0 TCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTG 581 consensus_14902#3 TCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTG 542 consensus_14902#2 TCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTG 562 consensus_14902#1 TCATTCCTGCTCCTAACCGAGGAACTTGGATGGTTATTTTCTCAGCATTTTGGACCATTG 572 ************************************************************ consensus_14902#0 GCACAATAATGGAAGCTTCACTAGCTTGGG-CTGTAGTGCCAAGTTTGGGCTGGAGGTGG 640 consensus_14902#3 GCACAATAATGG------------------------------------------------ 554 consensus_14902#2 GCACAATAATGGAAGCTTCACTAGCTTGGG-TAAATTTCTACATTTTGCCAAAGCTGTAA 621 consensus_14902#1 GCACAATAATGGAAGCTTCACTAGCTTGGGCTGTAATGCCAAGTTTGGGCTGGAGGTGGC 632 ************ consensus_14902#0 CTGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTG 700 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 TGCCAAGTTTGGGCTGGAGGTGGCTGCTAGCGTTCTCATCGTTGCCATCA---------- 671 consensus_14902#1 TGCTAGCGTTCTCATCGTTGCCATCATTTGCTCTACTACTGTTCTATCCACTGACACTGG 692 consensus_14902#0 GAATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAA 760 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 AATCACCAAGATACTTATGCATGAAGGGCAGAACTGCTGATGCGGTGCAGGTTTTGGAAA 752 consensus_14902#0 ACAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATCGA 820 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 CAATGGCACGATTAAACCGTGTAGCTCTCCCTTCTGGCCATCTTATGTCTGGCCATC--- 809 consensus_14902#0 ATGGAGCTCCATGAGTTGACAGATTCCTCAGAGACGTCACAGTTGCTTTCTGCTAAGAAA 880 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 ACCAACCCTGCTGCTCATTCTAGCAAACCGAGATTGGGGGCCGCAATGCGATTTTAAAGC 940 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 TTCTGTCCCCAAATTTAATTAGATCTAGTCTTCTTCTTTGGACTGTCTTTCTTGGTCATG 1000 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 CCTTCTTATACTACGGTCTTGTTCTACTAACCTCGGAATTGAGTCATGGAAATAAGATTT 1060 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 GTGGATCAGAGGGGATAGTAACAATGCAAACAAACCACTCAAACGATGCTAATCTGTACA 1120 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 GAAACGTGTTCATCACTAGCTTTGGAGAGGTTCCTGGCATTATACTATCTGCGGCAATAG 1180 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 TGGACAAGATTGGGCGCAAACTCTCAATGTCCTCTATGCTTTATATCAGTTGCCTGTGCA 1240 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 TAGCTCCCCTTATGGTCCCTCAAACAGAGTCCCTGACAACTATCTTCCTGTTCGGTGCAC 1300 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 GCATTTGCATCTCCGCAAGCTTCATTGTCTTGCACATCTATGCTCCTGAGATATACCCAA 1360 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 CCGCAGTCAGGGCTACCGGAGTCGGGTTTGCGAGCTCAATCGCTCGTTTCGGTGGGATCT 1420 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 TGTGCCCTCTTGTGGCCGTTGGTTTGGTGCACGCGTGCCATCAGACTGCAGCCATCCTGA 1480 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 TATTCATCACGGTGATGCTCGTCTCAGGTGTTGCAGTCTCATACTTTCCCCTGGAAACAA 1540 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 GCGGCCGGAAATTGAGTGACCACATCGCGGCGTAAGAGCTAAGTTGCGAGCAGAATCTGA 1600 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 CAGTGTTGCAAGTGCTAGTTTCTTTAGCTATACAAAATTACAGGATTGAGCTCCTAGAGG 1660 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 CCATTCAGATTTTTTTTTTCTTTCAGTTCGTTTAAAGATCATATATATAGAATAGAAATG 1720 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 AAAGATGGTGGATTTCAGATTTTAAATGTCATTACATTGTTTTAACCAGACATATGTAAA 1780 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 CTGCCAAATCGAGATGCTTGCTTTGCTCTCTTGAAATGGGATGATCAATATGTTTTGAAG 1840 consensus_14902#3 ------------------------------------------------------------ consensus_14902#2 ------------------------------------------------------------ consensus_14902#1 ------------------------------------------------------------ consensus_14902#0 GAAAAAAAAAAAAAAAAAAAAAAA 1864 consensus_14902#3 ------------------------ consensus_14902#2 ------------------------ consensus_14902#1 ------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||