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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14913#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1616 fasta sequence
[CTGAACCCTGAACCAATCCCGAACTCTGAACTCTGAAGGCTGCAGAGACAGGCAGAGAGATATGAGGGAGATAATAAGCATCCACATAGGGCAGGCGGGCATCCAGGTGGGGAATTCTTGCTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACACAACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAAGCACGTCCCAAGGGCGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGACCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCC-TACAAGGAAGACGCTGCTAACAACTTTGCTCGTGGGCACTACACAGTT-GGAAGAGAGGTGGTAGATCTTTGCCTTGATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATGCTGTTGGTGGAGGAACCGGCTCTGGACTTGGTTCATTACTTTTGGAGCGCCTATCAGTAGATTACGGTAGGAAGTCGAAGCTCGGGTTCACAATATATCCTTCACCACAGATCTCAACGGCCGTGGTGGAGCCTTACAACAGCGTGCTCTCGACCCACTCCCTGATCGAGCACACCGACGTCGTCGTCCTCCTGGACAACGAGGCCATCTACGACATCTGCAAGAGGTCGCTGGACATCGAGCGGCCGACGTACACCAACCTGAACAGGCTCATCTCCCAGGTGATCTCGTCGCTGACCACGTCGCTGCGGTTCGACGGCG-CCATCAACGTCGACATCACCGAGTTCCAGACCAACCTGGTGCCGTACCCGAGGATCCACTTCATGCTGTCCTCCTACGCCCCCATCATCTCCGTCGAGAAGGCGTTCCACGAGCAGCACTCCGTCCCGGAGATCACCAACTCCG-TCTTCGAGCCCGCCAGCGTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCGCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCGTCCACTCCATCAAGACCAGGAGGACTGTGCAG-TTCGTCGACTGGTGTCCGACAGGG-TTCAAGTGCGGGATAAACTACCA-GCCGCCGACGGCGGT-GCCGGGAGGGGACC-TGGCGAAGGTGAGGAGGGC-GGTGTGCATGATCAGCAACAACACGGCGGTGGCGGAGGTGTTCTC-GC-GGATCGA-CCGCAAG-TT-CGACCTCATGTACGCCA-AGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG-CCAGGGAGGAC-C-TC-GCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA-CGGTAGATAAACCGCA-AGTTTGTAAGGTC-GGTGGAAGGGGGTCTCTC-GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCATCA-CAAAAAATAAAAGAATTCGTCAGAAATCAAAATGTGAATCA-AAAGCAAAAAAAAAAAAGAAAAAAAAAA]
[+] EMBL AK071837 [CTGAACCCTGAACCAATCCCGAACTCTGAACTCTGAAGGCTGCAGAGACAGGCAGAGAGATATGAGGGAGATAATAAGCATCCACATAGGGCAGGCGGGCATCCAGGTGGGGAATTCTTGCTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACACAACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAAGCACGTCCCAAGGGCGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGACCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCC TACAAGGAAGACGCTGCTAACAACTTTGCTCGTGGGCACTACACAGTT GGAAGAGAGGTGGTAGATCTTTGCCTTGATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATGCTGTTGGTGGAGGAACCGGCTCTGGACTTGGTTCATTACTTTTGGAGCGCCTATCAGTAGATTACGGTAGGAAGTCGAAGCTCGGGTTCACAATATATCCTTCACCACAGATCTCAACGGCCGTGGTGGAGCCTTACAACAGCGTGCTCTCGACCCACTCCCTGATCGAGCACACCGACGTCGTCGTCCTCCTGGACAACGAGGCCATCTACGACATCTGCAAGAGGTCGCTGGACATCGAGCGGCCGACGTACACCAACCTGAACAGGCTCATCTCCCAGGTGATCTCGTCGCTGACCACGTCGCTGCGGTTCGACGGCG CCATCAACGTCGACATCACCGAGTTCCAGACCAACCTGGTGCCGTACCCGAGGATCCACTTCATGCTGTCCTCCTACGCCCCCATCATCTCCGTCGAGAAGGCGTTCCACGAGCAGCACTCCGTCCCGGAGATCACCAACTCCG TCTTCGAGCCCGCCAGCGTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCGCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCGTCCACTCCATCAAGACCAGGAGGACTGTGCAG TTCGTCGACTGGTGTCCGACAGGG TTCAAGTGCGGGATAAACTACCA GCCGCCGACGGCGGT GCCGGGAGGGGACC TGGCGAAGGTGAGGAGGGC GGTGTGCATGATCAGCAACAACACGGCGGTGGCGGAGGTGTTCTC GC GGATCGA CCGCAAG TT CGACCTCATGTACGCCA AGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG CCAGGGAGGAC C TC GCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA CGGTAGATAAACCGCA AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCATCA CAAAAAATAAAAGAATTC ]
[+] EMBL CB643423 [ AACCCTCAACCAATCCCGAACTCTGAACTCTGAAGGCTGCAGAGACAGGCAGAGAGATATGAGGGAGATAATAAGCATCCACATAGGGCAGGCGGGCATCCAGGTGGGGAATTCTTGCTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACACAACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAAGCACGTCCCAAGGGCGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGACCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCC TACAAGGAAGACGCTGCTAACAACTTTGCTCGTGGGCACTACACAGTT GGAAGAGAGGTGGTAGATCTTTGCCTTGATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATGCTGTTGGTGGAGGAACCGGCTCTGGACTTGGTTCATTACTTTTGGAGCGCCTATCAGTAGATTACGGTAGGAAGTCGAAGCTCGGGTTCACAATATATCCTTCACCACAGATCTCAACGGCCGTGGTGGAGCCTTACAACAGCGTGCTCTCGACCCACTCCCTGATCGAGCACACCGACGTCGTCGTCCTCCTGGACAACGAGGCCATCTACGACATCTGCAAGAGGTCGCTGGACATCGAGCGGCCGACGTACACCAACCTGAACAGGCTCATCTCCCAGGTGATCTCGTCGCTGACCACGTCGCTGCGGNTCGACGGCG CCATCAACGTCGACATC ]
[+] EMBL CB645714 [ AACCCTCAACCAATCCCGAACTCTGAACTCTGAAGGCTGCAGAGACAGGCAGAGAGATATGAGGGAGATAATAAGCATCCACATAGGGCAGGCGGGCATCCAGGTGGGGAATTCTTGCTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACACAACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAAGCACGTCCCAAGGGCGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGACCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCC TACAAGGAAGACGCTGCTAACAACTTTGCTCGTGGGCACTACACAGTT GGAAGAGAGGTGGTAGATCTTTGCCTTGATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATGCTGTTGGTGGAGGAACCGGCTCTGGACTTGGTTCATTACTTTTGGAGCGCCTATCAGTAGATTACGGTAGGAAGTCGAAGCTCGGGTTCACAATATATCCTTCACCACAGATCTCAACGGCCGTGGTGGAGCCTTACAACAGCGTGCTCTCGACCCACTCCCTGATCGAGCACACCGACGTCGTCGTCCTCCTGGACAACGAGGCCATCTACGACATCTGCAAGAGGTCGCTGGACATCGAGCGGCCGACGTACACCAACCTGAACAGGCTCATCTCCCAGGTGATCTCGTCGCTGACCACGTCGCTGCGGTTCGACGGCGCCCATCAc ]
[+] EMBL AU056228 [ AACCCTGAACCAATCCCGAACTCTGAACTCTGAAGGCTGCAGAGACAGGCAGAGAGATATGAGGGAGATAATAAGCATCCACATAGGGCAGGCGGGCATCCAGGTGGGGAATTCTTGCTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACACAACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAAGCACGTCCCAAGGGCGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGACCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCCTTACAAGGAAGACGCTGCTAACAACTTTGCTCGTGGGCACTACACAGTTGGGAAGAGAGGTGGTAGATCTTTGCCTTGATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATGCTGTTGGTGGAGGAACCGGCTCTGGACTTGGTTCATTACTTTTGGAGCGCCTATCAGTAGATTACGGTAGGAAGTCGAAGCTCGGGTTCACAATATATCCTTCACCACAGATCTCAACGGCCGTGGTGGAGCCTTACAACAGCGTGCTCTCGACCCACTCCCTGATCGAGCACACCGACGTCGTCGTCCTCCTGGACAACGAGGCCATCTACGACATCTGCAAGAGGTCGCTGGACATCGAGCGGCCGACGTACACCAACCTGAACAGGCTCATCTCCAAGGTGAT ]
[+] EMBL OSSS28419 [ GAGCAGCTCATCTCC TACAAGGAAGACGCTGCTAACAACTTTGCTCGTGGGCACTACACAGTT GGAAGAGAGGTGGTAGATCTTTGCCTTGATCGACTAAGAAAACTNGCAGATAACTGCACTGGTCTCCAAGGTTTTNTGGTTTTAAATGCTGTTGGTGGAGGAACCGGCTCTGGTCTTGGTTNATTACTTTTGGAGCGCCTATCAGTAGATTACGGTAGGAAGTCGAAGCTCGGGTTTACAATATATCCTTCACCACAGTTCTCAACGGTCGTG ]
[-] EMBL CB643424 [ CAACCTGGTGCCGTACCCGAGGATCCACTTCATGCTGTCCTCCTACGCCCCCATCATCTCCGTCGAGAAGGCGTTCCACGAGCAGCACTCCGTCCCGGAGATCACCAACTCCG TCTTCGAGCCCGCCAGCGTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCGCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCGTCCACTCCATCAAGACCAGGAGGACTGTGCAG TTCGTCGACTGGTGTCCGACAGGG TTCAAGTGCGGGATAAACTACCA GCCGCCGACGGCGGT GCCGGGAGGGGACC TGGCGAAGGTGAGGAGGGC GGTGTGCATGATCAGCAACAACACGGCGGTGGCGGAGGTGTTCTC GC GGATCGA CCGCAAG TT CGACCTCATGTACGCCA AGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG CCAGGGAGGAC C TC GCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA CGGTAGATAAACCGCA AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCATGG CAAAAAATAAAAGAATTCGTCAGAAATCAAccataaaa ]
[-] EMBL CB645715 [ CCACTTCATGCTGTCCTCCTACGCCCCCATCATCTCCGTCGAGAAGGCGTTCCACGAGCAGCACTCCGTCCCGGAGATCACCAACTCCG TCTTCGAGCCCGCCAGCGTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCGCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCGTCCACTCCATCAAGACCAGGAGGACTGTGCAG TTCGTCGACTGGTGTCCGACAGGG TTCAAGTGCGGGATAAACTACCA CCCGCCGACGGCGGT GCCGGGAGGGGACC TGGCGAAGGTGAGGAGGGC GGTGTGCATGATCAGCAACAACACGGCGGTGGCGGAGGTGTTCTC GC GGATCGA CCGCAAG TT CGACCTCATGTACGCCA AGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG CCAGGGAGGAC C TC GCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA CGGTAGATAAACCGCA AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTACGGTCA CAAAAAATAAAAGAATTCGTCAGAAATCAATATaaagg ]
[+] EMBL AU056229 [ CCNTCGAGAAGGC TTCCACGAGCAGCACTCCGTCCC GAGATCACCAACTCCG TCTTC AGCCCGCCAGCGTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCGCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCNTCCACTCCATCAAGACCAGGAGGACTGTNCAG TTCGTCGACTGGTGTCCGACAGGG TTCAAGTGCGGGATAAACTACCANGCC CCGACGGCGGT GCCGGGAGGGGACC TGGCGAAGGTGAGGAGGGC GGTGTGCATGATCAGCAACAACACGGCGGTGGCGGAGGTGTTCTC GC GGATCGA CCGCAAG TT CGACCTCATGTACGCCA AGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG CCAGGGAGGAC C TC GCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA CGGTAGATAAACCGCA AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCATCA CAAAAAATAAAAGAATTCGTCAGAAATCAAAA AA A AAA AAAAAAAAAA ]
[+] EMBL AU065092 [ AGAAGGCGTTCCACGAGCAGCACTCCGTCCCGGAGATCACCAACTCCG TCTTCGAGCCCGCNAGCGTCATGGCCAAGTGCGATCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCGCGGCGACGTCGTCCCCAAGGACGTNAACGCCGCCGTCCACTCCATCAAGACCAGGAGGACTGTGCAG TTCGTCGACTGGTGTNCGACAGGG TTCAAGTGCGGGATAAACTACCA GCCGCCGACGG GTT GCCGGGAGGGGACCTTGGCGAAGGTNAAGAGGGCNGTTGTGCATNATCAGCAA AACACGGCGGTTGCGGAAGTG TCTC GC GGATTGA CCGCAAG TT CGACCTTANTTTCGCa ]
[+] EMBL AU064917 [ AGAAGGCGTTCCACGAGCAGCACTCCGTCCCGGAGATCACCAACTCCG TCTTCGAGCCCGCCAGCGTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCGCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCGTCCACTCCATCAAGACCAGGAGGACTGTGCAG TTCGTCGACTGGTGTCCGACAGGG TTCAAGTGCGGGATAAACTACCA GCCGCCGAC GCGGT GCCGGGAGGGGACC TGGCGAAGGTGAGGAGGGC GGTGTGCATGATCAGCAACAACACGGCGGTTGCGGAGGTGTTCTN GCGGGATCGA CCGAAAG TTNGGACCTCAT ]
[+] EMBL AU064148 [ AGAAGGCGTTCCACGAGCAGCACTCCGTCCCGGAGATCACCAACTCCG TCTTCGAGCCCGCCAGCNTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCGCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCGTCCACTCCATCAAGACCAGGAGGACTGTGCAG TTCGTCGACTGGTGTCCGACAGGG TTCAAGTGCGGGATAAACTACCA GCCGCCGACGG GGTNGCCGGGAGGGGACC TGGCGAAGGTGAGGAGGGC GGTGTGCATGATCAGCAACAACACGGCGGTTGCGGAGGTGTTCTCNGC GGATCGACCCGAAAGTTT CGACC ]
[+] EMBL AU165674 [ ATCACCAACTCCGTTTTTCGAGCCCGCCAGCGTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACCNCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCGTCCACTCCATCAAGACCAGGAGGACTGTGCAG TTCGTCGACTGGTGTCCGACAGGG TTCAAGTGCGGGATAAACTACCA GCCGCCGACGGCGGT GCCGGGAGGGGACC TGGCGAAGGTGAGGAGGNC GGTGTGCATGATCAGCAACAACACGGCGGTGGCGGAGGTGTTCTC GC GGATCGA CCGCAAG TT CGACCTCATGTACGCCA AGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG CCAGGGAGGAC C TC GCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA CGGTAGATAAACCGCA AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCATCA CAAAAAATAAAAGAATTCGTCAGAAATCAAAATGTGAATCA AAAGCAAAAAAA ]
[+] EMBL BI810681 [ GCACGGCAAGTACAT GCCTGCTG CTGATGTACC C GCGACGTCGTCCCCAAGGACGTCAAC CCACCGTCCACTCCATCAAGACCAGGAGGACTGTGCAGTTTCGTCGACTGGTGTCCGACAGGGTTTCAAGTGCGGGATAAACTACCA GCCGCCGAC GCGGT GCCGGGAGGGGACC TGGCGAAGGTGAGGA GGC GGTGTGCATGATCACAAACAACAC GCGGT GCGGAGGTGTTCTC GC GGATCGA CCGCAAG TT CGACCTCATGTACGCCA AGCGCGCGTTCGTGCACTGGTACGT GGCGAAGGGATGGAGGAAGGGGAGTTCTCCGA G CCAGGGAGGAC C TC CCGCGCTGGAGAAGGACTACGAGGAGGTCGGC CCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA CGGTAAATAAACCGCA AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCACCA CAAAAAATAAAAGAATTCGTCAGAAATC AAATGTGAATC AAAGCAAAAAA ]
[+] EMBL AU094946 [ anGTCAACGCCGCCGTCNACTCCATCAAGACCNGGAGGACTGTGCAG TTCGTCGACTGGTGTCCNACAGGG TTCAAGTGCGGGATAAACTACCA GNC CCGACGGCGGT GCCNGGAGGGGACC TGGCGAAGGTGAGGAGGGC GGTGTGCATGATCAGCAACAACACGGCGGTGGCGGAGGTGTTCTC GC GGATCGA CCGCAAG TT CGACCTCATGTACGCCA AGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG CCAGGGAGGAC C TC GCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA CGGTAGATAAACCGCA AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCATCA CAAAAAATAAAAGAATTCGTCAGAAATCAAAATGTGAATCA AAAGCAAAAAAA ]
[+] EMBL BI810225 [ GGA GGGACC T GCGAAGTTGAGGA GGC CGTGTGCATGATCAGCAACAACACGGCGGTGCCGGAGGTGTTCTC C GGATCGA CCGCAAG TT CGACCTCATGTACGCCACAGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG CCAGGGAGGAC C TC CCGCGCTGGAGAAGGACTACGAGGA GTCGGC CCGAAGTCGAGGACGACGACGAGGAACCGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCC CGGTAAATAAACCGCC AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACCTGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCACCA CCAAAAATAAAAGAATTCGTCAGAAATCCAAATGTGAATCC AAAGCCAAAAAAAAAAAGAAAAAAAAAA]
[+] EMBL AU055934 [ ACC TGGCGAAGGTGAGGAGGGC GGTGTGCATGATCAGCAACAACACGGCGGTGGCGGAGGTGTTCTC GC GGATCGA CCGCAAG TT CGACCTCATGTACGCCA AGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCGAGG CCAGGGAGGAC C TC GCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCA CGGTAGATAAACCGCA AGTTTGTAAGGTC GGTGGAAGGGGGTCTCTC GGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCATCA CAAAAAATAAAAGAATTCGTCAGAAATCAAAAaaaa ]
[+] EMBL BI810403 [ CGAAGGGATGGAGGAAGGGGAGTTTGCCGAGGCCCTGGGAGGACACTTCATCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCGAGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGCACCGGTAAATAAACCGCACAGTTTGTAAGGTCAGGTGGAAGGGGGTCTCTCAGGTTTACATGGACTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCACCACCAAAAAATAAAAGAATTCGTCAGAAATCAAAATGTGAATCACAAAGCCAAAAAAAAAAAGAAAAAAAAAA]
consensusID : consensus_14913#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 416 fasta sequence
[ACGAGACAAGGGGGAGGTGGGGAATTCTTGCTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACACAACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAAGCACGTCCCAAGGNGCGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGACCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCCTACAAGGAAGACGCTGCTAACAACTTTGCTCGTGGGCACTACACAGTTGGAAGAGAGGTGGTAGATCTTTGCCTTGATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATGCTGTTGGTGGAGGAACCGGCTCTGGA]
[+] EMBL CA763794 [ACGAGACAAGGGGGAGGTGGGGAATTCTTGCTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACACAACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAAGCACGTCCCAAGGNGCGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGACCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCCTACAAGGAAGACGCTGCTAACAACTTTGCTCGTGGGCACTACACAGTTGGAAGAGAGGTGGTAGATCTTTGCCTTGATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATGCTGTTGGTGGAGGAACCGGCTCTGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14913#0 CTGAACCCTGAACCAATCCCGAACTCTGAACTCTGAAGGCTGCAGAGACAGGCAGAGAGA 60
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 TATGAGGGAGATAATAAGCATCCACATAGGGCAGGCGGGCATCCAGGTGGGGAATTCTTG 120
consensus_14913#1 -------------------------ACGAGACAAGGGGG-----AGGTGGGGAATTCTTG 30
* * ** * *** ****************
consensus_14913#0 CTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACAC 180
consensus_14913#1 CTGGGAACTATACTGCCTCGAGCATGGCATCCAGCCGGACGGCCTCATGCCCAGCGACAC 90
************************************************************
consensus_14913#0 AACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAA 240
consensus_14913#1 AACTCCTGGAATTGCAAGGGATGCATTCAACACGTTCTTCAGCGAGACGAGTTCAGGCAA 150
************************************************************
consensus_14913#0 GCACGTCCCAAGGG-CGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGA 299
consensus_14913#1 GCACGTCCCAAGGNGCGTTGTTCGTCGACCTGGAGCCCACGGTGATTGATGAGGTGAAGA 210
************* *********************************************
consensus_14913#0 CCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCCTACAAGGAAGACGCTG 359
consensus_14913#1 CCGGGCCATACCGCCAGCTCTTCCACCCAGAGCAGCTCATCTCCTACAAGGAAGACGCTG 270
************************************************************
consensus_14913#0 CTAACAACTTTGCTCGTGGGCACTACACAGTTGGAAGAGAGGTGGTAGATCTTTGCCTTG 419
consensus_14913#1 CTAACAACTTTGCTCGTGGGCACTACACAGTTGGAAGAGAGGTGGTAGATCTTTGCCTTG 330
************************************************************
consensus_14913#0 ATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATG 479
consensus_14913#1 ATCGACTAAGAAAACTGGCAGATAACTGCACTGGTCTCCAAGGTTTTCTGGTTTTCAATG 390
************************************************************
consensus_14913#0 CTGTTGGTGGAGGAACCGGCTCTGGACTTGGTTCATTACTTTTGGAGCGCCTATCAGTAG 539
consensus_14913#1 CTGTTGGTGGAGGAACCGGCTCTGGA---------------------------------- 416
**************************
consensus_14913#0 ATTACGGTAGGAAGTCGAAGCTCGGGTTCACAATATATCCTTCACCACAGATCTCAACGG 599
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 CCGTGGTGGAGCCTTACAACAGCGTGCTCTCGACCCACTCCCTGATCGAGCACACCGACG 659
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 TCGTCGTCCTCCTGGACAACGAGGCCATCTACGACATCTGCAAGAGGTCGCTGGACATCG 719
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 AGCGGCCGACGTACACCAACCTGAACAGGCTCATCTCCCAGGTGATCTCGTCGCTGACCA 779
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 CGTCGCTGCGGTTCGACGGCGCCATCAACGTCGACATCACCGAGTTCCAGACCAACCTGG 839
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 TGCCGTACCCGAGGATCCACTTCATGCTGTCCTCCTACGCCCCCATCATCTCCGTCGAGA 899
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 AGGCGTTCCACGAGCAGCACTCCGTCCCGGAGATCACCAACTCCGTCTTCGAGCCCGCCA 959
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 GCGTCATGGCCAAGTGCGACCCCAGGCACGGCAAGTACATGGCCTGCTGCCTGATGTACC 1019
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 GCGGCGACGTCGTCCCCAAGGACGTCAACGCCGCCGTCCACTCCATCAAGACCAGGAGGA 1079
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 CTGTGCAGTTCGTCGACTGGTGTCCGACAGGGTTCAAGTGCGGGATAAACTACCAGCCGC 1139
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 CGACGGCGGTGCCGGGAGGGGACCTGGCGAAGGTGAGGAGGGCGGTGTGCATGATCAGCA 1199
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 ACAACACGGCGGTGGCGGAGGTGTTCTCGCGGATCGACCGCAAGTTCGACCTCATGTACG 1259
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 CCAAGCGCGCGTTCGTGCACTGGTACGTGGGCGAAGGGATGGAGGAAGGGGAGTTCTCCG 1319
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 AGGCCAGGGAGGACCTCGCCGCGCTGGAGAAGGACTACGAGGAGGTCGGCGCCGAAGTCG 1379
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 AGGACGACGACGAGGAACAGGGCGAGTACTGATCGGGCTAGCCTGCTAGGTGAATCTAGC 1439
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 ACGGTAGATAAACCGCAAGTTTGTAAGGTCGGTGGAAGGGGGTCTCTCGGTTTACATGGA 1499
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 CTCTTGTGACTTTGTGGTGTGAGAGTGGGTTTTGTTGTACTTGCATCACAAAAAATAAAA 1559
consensus_14913#1 ------------------------------------------------------------
consensus_14913#0 GAATTCGTCAGAAATCAAAATGTGAATCAAAAGCAAAAAAAAAAAAGAAAAAAAAAA 1616
consensus_14913#1 ---------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||