These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14927#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 2161 fasta sequence [TTGCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACG---GGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC-ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTTACCATATGATGGAGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGCCTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGGGATGGCTGACAAAGAAACGGAGCACTCAAAGACGCCATTCATTGCACGGGTTTTCATGAGTATTTCAGGCTCTTCACAGAATACATTTCCTGATATTGATTTTGCAGAAGAGGGCACTTCTGGTGCTGGACCTAGCAGTCCAAAATCGCTAAGGTGTTTGGCGGAGCCAAAGGTTGTAAGGAGGATCAGGGTTGTAGCTGAGAAGACTCCAATTCAGCATGTTCTCCAGCCACCAACCATCGCCTCCTTGCTCGCCATTGTCATCGGCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTGATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCTCGGTGATGTTAATTCTAGGGGGCATGCTTGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC-TTGTCGAGGAAGACCACATGTACCGCTTTG-TGCTG-TCGC-TACAGTACTCCACCCCTA-GT-G-CCATCCTGC-TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT-ACCTGATCGTATATTTCAGGTTGCTTACCA-TTTGAAAGATGATGGCCGGCCGCCT-TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA-TTTTTTTTAGCGATTTATATTTCAGATACA-TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTTCACTTGTGAAAAAAAAAAAAAAAAAAA] [+] EMBL AK065037 [TTGCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACGCCCCCCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCGCAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTTACCATATGATGGAGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGCCTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGGGATGGCTGACAAAGAAACGGAGCACTCAAAGACGCCATTCATTGCACGGGTTTTCATGAGTATTTCAGGCTCTTCACAGAATACATTTCCTGATATTGATTTTGCAGAAGAGGGCACTTCTGGTGCTGGACCTAGCAGTCCAAAATCGCTAAGGTGTTTGGCGGAGCCAAAGGTTGTAAGGAGGATCAGGGTTGTAGCTGAGAAGACTCCAATTCAGCATGTTCTCCAGCCACCAACCATCGCCTCCTTGCTCGCCATTGTCATCGGCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTGATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCTCGGTGATGTTAATTCTAGGGGGCATGCTTGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGCTTTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTG GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTCTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGTCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGC ] [+] EMBL CB630417 [ GCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACG GGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTCGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCCNACCGC AGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACC TGGTTTACC ] [+] EMBL CB630419 [ GCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACG GGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTCGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTT ] [+] EMBL CB630462 [ GCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGGCGCGCGCGTGGACG GGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCGCCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTTGGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAGGGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTCGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTT ] [+] EMBL AU166671 [ AAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGGCGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGGACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTGTGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCG ] [+] EMBL CA997869 [ GAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGCTCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAATTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGGCATCGGGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCGCAGTTTTTCAGGTTCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGTCGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCC ACCGCAAGGGTGTCGCTTATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTTACCATATGATGGAGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGCCTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGG ] [+] EMBL CB681681 [ AGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGCCTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGGGATGGCTGACAAAGAAACGGAGCACTCAAAGACGCCATTCATTGCACGGGTTTTCATGAGTATTTCAGGCTCTTCACAGAATACATTTCCTGATATTGATTTTGCAGAAGAGGGCACTTCTGGTGCTGGACCTAGCAGTCCAAAATCGCTAAGGTGTTTGGCGGAGCCAAAGGTTGTAAGGAGGATCAGGGTTGTAGCTGAGAAGACTCCAATTCAGCATGTTCTCCAGCCACCAACCATCGCCTCCTTGCTCGCCATTGTCATCGGCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTGATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCTCGGTGATGTTAATTCTAGGGGGCATGCTTGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAAAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAG ] [-] EMBL CB681682 [ GCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTGATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCTCGGTGATGTTAATTCTAGGGGGCATGCTTGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTTTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTCTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTAAGGGTCGCTTGCACATTTCTTGAT ] [-] EMBL CB630420 [ TGCAGAAGGACCCAAGGATAATGCCTTGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTTCACTTGTG ] [-] EMBL CB630418 [ TGCAGAAGGACCCAAGGATAATGCC TGGGTATCCGGACTATCACTGGTATAATTGTTGCAAGGCTCNTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTT ] [-] EMBL CB630463 [ TGCAAGGCTCCTGATTCTCCCGTGCATTGGCATCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTT ] [+] EMBL CF292760 [ TCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGC TTGTCGAGGAAGACCACATGTACCGCTTTG TGCTG TCGC TACAGTACTCCACCCCTA GT G CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTCTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATG ] [+] EMBL BI807491 [ tccctgTTTGTTCCTGTTCGCTTACAGTACTCCA CCCTAGGT GCCCATCCTGCGTTGGA CGATTGCGAGCCTCAGAGGTTATCTTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGT CGGTGCTATCTC TTCCATCTGACCTGATCGTATATTTCAGGTTGCTTACCAGTTTGAAAGATGACGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACACTGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTC ATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTAC GTTGCTGCTC AAAGTTGTACAAGTACTGCTACATTAGAAGTC ATATATTGCTGTTTGATGCAGTGATGCTTAAAaaaaaaa ] [+] EMBL BQ908292 [ CAGTACTCCACCCCTA GTGG CCATCCTGC TTGGAGCGATTGCGAGCCTCAGAGGTTATGCTGTCAAGGAAGCANCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGACGGCCGGCCGCCTGTCC AAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGNATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTC ATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTAC GTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATCCAGTGATGCTTAAAaa ] [+] EMBL BI807848 [ gaCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGT CGGTGCTATCTCTTTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGACGGCCGGCCGCCT TCC AAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTC ATATATTGCTGTTTGAT CAGTGATGCTTAAATAaaaa ] [+] EMBL AU166670 [ TCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGTGCGGTGCTATCTCTCTCCATCT ACCTGATCGTATATTTCAGGTTGCTTACCA TTTGAAAGATGATGGCCGGCCGCCT TCCAAAATTGGTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAaaaaaaa ] [-] EMBL CF292761 [ GTTTGTAGCATTCATCCTCGGAAGTGATTTCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATATTTAATTTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTTTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACTGCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTTTTATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGAGAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BI808178 [ aTGAATGCTAGGGAGATGGGTACTTGAATGGATTTTCAACCACGTCTCCTTATGGTCAAGTGTATTTATAGTATAGTTAA TTTTTTTTAGCGATTTATATTTCAGATACA TGTAGAACTTGAGAACATGAGATATGTTCTTGTCGTTCATTAGTGTCAATATATTGCTGTTCGCTTGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTC AAAGTTGTACAAGTACTGCTACATTAGAAGTC ATATATTGCTGTTTGATc ] consensusID : consensus_14927#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 615 fasta sequence [CATTGGGANATTCTAGCTCAACCCGTTGTACCCCTCGTGATGTGAATTTTAGGGCCATGCCTTGCAGAAGGACCCAAGGATAATCCTTGGGTATCCGGACTATCACTGGGTATAATTTTTGCCAAGGCTTCTGATTCTCCCGNGCATTGGCATCGGTGTCGTCCTGCTGCCAGATCGTTGCATCTGCTTGGTCGAGGAAGACCACATGTACCGCTTTGTGCTGTCGCTGCAGTACTCCACCCCTAGTGCCATCCTGCTTGGAGCGATTGCGAGCCTGAGAGGCTATGCTGTCAAGGAAGCATCAGCACTCCTATTCTGGCAGCACATTTGTGCAGTGCTATCTCTGTGTCCATGCTGACCTGGATGCGTATATTTCAGGTTGCTTACCATTTGAAAGATGATGGCCTGCCGCCTTCCAAAATTGGGTTTATAGCATTCATGCCTCGGAAGTGATTTCTACGGGAGAGGGGTACTTGAATGGATTTTCAACCACATCTGCCTTATGGGTGCAAGTGTATTTATAGTATTTTAAATNTTTNTAGTATTTGTATTTCAGTTACATGTAGAACTGGAGAACAGGATATATATGCTCTTGTTGTTCAATTAAAAAAAAAA] [+] EMBL BI806374 [CATTGGGANATTCTAGCTCAACCCGTTGTACCCCTCGTGATGTGAATTTTAGGGCCATGCCTTGCAGAAGGACCCAAGGATAATCCTTGGGTATCCGGACTATCACTGGGTATAATTTTTGCCAAGGCTTCTGATTCTCCCGNGCATTGGCATCGGTGTCGTCCTGCTGCCAGATCGTTGCATCTGCTTGGTCGAGGAAGACCACATGTACCGCTTTGTGCTGTCGCTGCAGTACTCCACCCCTAGTGCCATCCTGCTTGGAGCGATTGCGAGCCTGAGAGGCTATGCTGTCAAGGAAGCATCAGCACTCCTATTCTGGCAGCACATTTGTGCAGTGCTATCTCTGTGTCCATGCTGACCTGGATGCGTATATTTCAGGTTGCTTACCATTTGAAAGATGATGGCCTGCCGCCTTCCAAAATTGGGTTTATAGCATTCATGCCTCGGAAGTGATTTCTACGGGAGAGGGGTACTTGAATGGATTTTCAACCACATCTGCCTTATGGGTGCAAGTGTATTTATAGTATTTTAAATNTTTNTAGTATTTGTATTTCAGTTACATGTAGAACTGGAGAACAGGATATATATGCTCTTGTTGTTCAATTAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14927#0 TTGCCTCTCTGCGTGATCCCGATCTGCAGAGCTCGCCGCCGGCGAGCTAAGCCCCGGAGG 60 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CGCGCGCGTGGACGGGCCCCCCCTTCTCCTCCGAGCAGCGGCCACCGGTGGCCGCCGCCG 120 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CCATCTCGGTCTCGAATCGAGGTGGACAGAAAAAAGTCATCAGCTTTCTGCATGCGATTT 180 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 GGTAGATACTGACACGTCTTGATTCTGCTCAAGGAAGGCAGCTGATTGATTGGTTGGGAG 240 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 GGCAAACTAAAAGGGGTGTAATCTTGGCCAATTCGATAGAAAAACACAGAGATTTAGTGG 300 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CGAGAATGGATTGGCTGTCCGCGAACCTGCAGGTGAACCCTCAGGTGACTGTCCATGGGG 360 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 ACTGGGTGTCAGCAGTCATGCCGCTGATGAAGCTGCTGTGCTTGACGGTCATCGGCCTTG 420 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 TGCTGTCCAACCCGAGGACGCAGATCATCCCCAAGGCCACCTTCAAGCTCCTGAGCAAGC 480 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 TCGTCTTTGCGCTGTTCCTGCCATGCCTGATCTTTGTCCACCTTGGCCAGTCGGTCACAA 540 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 TTCAGAACATCCTCGACTGGTGGTTCATCCCGGTCAACGTGCTCATCAGCACGGCCATCG 600 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 GGTGCATTCTTGGGTACATCGTCGCGCTGATCTGTCGCCCGCCGCCACAGTTTTTCAGGT 660 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 TCACGGTGATCATGACCGGATTTGGCAACACGGGTAACCTCCCAATCGCGATCATCGGGT 720 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CGGTTTGCCATACCACGGATCACCCCTTTGGTCCTGGATGCCACCGCAAGGGTGTCGCTT 780 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 ATGTTTCGTTTGCTCAATGGGTCGCTGTTATTCTTGTCTACACCTTGGTTTACCATATGA 840 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 TGGAGCCACCGATGCAATTCTACGAGATTGTAGGCGAAGGGAACGAGATTGTGGAAGAGC 900 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CTGCACAGATCAGCAACTACAGTAGATCTCTGCTTCATGAAGCGGAATGGCCAGGGATGG 960 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CTGACAAAGAAACGGAGCACTCAAAGACGCCATTCATTGCACGGGTTTTCATGAGTATTT 1020 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CAGGCTCTTCACAGAATACATTTCCTGATATTGATTTTGCAGAAGAGGGCACTTCTGGTG 1080 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CTGGACCTAGCAGTCCAAAATCGCTAAGGTGTTTGGCGGAGCCAAAGGTTGTAAGGAGGA 1140 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 TCAGGGTTGTAGCTGAGAAGACTCCAATTCAGCATGTTCTCCAGCCACCAACCATCGCCT 1200 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 CCTTGCTCGCCATTGTCATCGGCATGGTTCCTTTGTTCAAAGATTTTGTGTTTGTGCCTG 1260 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 ATGCACCACTGTCGTTCTTTACAGACAGTTTGGAGATTCTAGCTCAAGCCGTTGTACCCT 1320 consensus_14927#1 --------------------------CATTGGGANATTCTAGCTCAACCCGTTGTACCCC 34 ** *** ************ *********** consensus_14927#0 CGGTGATGTTAATTCTAGGGGGCATGC-TTGCAGAAGGACCCAAGGATAATGCCTTGGGT 1379 consensus_14927#1 TCGTGATGTGAATTTTAGGGC-CATGCCTTGCAGAAGGACCCAAGGATAAT-CCTTGGGT 92 ******* **** ***** ***** *********************** ******** consensus_14927#0 ATCCGGACTATCACTGG-TATAATTGTTGC-AAGGCTCCTGATTCTCCCGTGCATTGGCA 1437 consensus_14927#1 ATCCGGACTATCACTGGGTATAATTTTTGCCAAGGCTTCTGATTCTCCCGNGCATTGGCA 152 ***************** ******* **** ****** ************ ********* consensus_14927#0 TCGGTGTCGTCCTGCTGGCAGATCGGTTGCATCTGCTTG-TCGAGGAAGACCACATGTAC 1496 consensus_14927#1 TCGGTGTCGTCCTGCTGCCAGATCG-TTGCATCTGCTTGGTCGAGGAAGACCACATGTAC 211 ***************** ******* ************* ******************** consensus_14927#0 CGCTTTGTGCTGTCGCTACAGTACTCCACCCCTAGTGCCATCCTGCTTGGAGCGATTGCG 1556 consensus_14927#1 CGCTTTGTGCTGTCGCTGCAGTACTCCACCCCTAGTGCCATCCTGCTTGGAGCGATTGCG 271 ***************** ****************************************** consensus_14927#0 AGCCTCAGAGGTTATGCTGTCAAGGAAGCATCGGCACTTCTATTCTGGCAGCACATTTGT 1616 consensus_14927#1 AGCCTGAGAGGCTATGCTGTCAAGGAAGCATCAGCACTCCTATTCTGGCAGCACATTTGT 331 ***** ***** ******************** ***** ********************* consensus_14927#0 GCGGTGCTATCTCTTT--CCATCT--ACCTGAT--CGTATATTTCAGGTTGCTTACCATT 1670 consensus_14927#1 GCAGTGCTATCTCTGTGTCCATGCTGACCTGGATGCGTATATTTCAGGTTGCTTACCATT 391 ** *********** * **** ***** ************************* consensus_14927#0 TGAAAGATGATGGCCGGCCGCCTTCCAAAATTGG-TTTGTAGCATTCAT-CCTCGGAAGT 1728 consensus_14927#1 TGAAAGATGATGGCCTGCCGCCTTCCAAAATTGGGTTTATAGCATTCATGCCTCGGAAGT 451 *************** ****************** *** ********** ********** consensus_14927#0 GATTTCTA-GGGAGATGGGTACTTGAATGGATTTTCAACCACGTCT-CCTTATGGT--CA 1784 consensus_14927#1 GATTTCTACGGGAGAGGGGTACTTGAATGGATTTTCAACCACATCTGCCTTATGGGTGCA 511 ******** ****** ************************** *** ******** ** consensus_14927#0 AGTGTATTTATAGTATATTTAATTTTTTTTAGCGATTTATATTTCAGATACATGTAGAAC 1844 consensus_14927#1 AGTGTATTTATAGTAT-TTTAAATNTTTNTAGT-ATTTGTATTTCAGTTACATGTAGAAC 569 **************** ***** * *** *** **** ******** ************ consensus_14927#0 TTGAGAACATGAGATATGT--TCTTGTCGTTCA-TTAGTGTCAATATATTGCTGTTCGCT 1901 consensus_14927#1 TGGAGAACAGGATATATATGCTCTTGTTGTTCAATTAAAAAAAAAA-------------- 615 * ******* ** **** * ****** ***** *** ** * consensus_14927#0 TGCACATTTCTTGATCCGATTACAGCATTACAGTTGCTGCTCAAAAGTTGTACAAGTACT 1961 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 GCTACATTAGAAGTCAATATATTGCTGTTTGATGCAGTGATGCTTAAATATACATGCTCT 2021 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 TATGGATTAAATGTATGTAATTTGTTAGTGATTTGTATTTCAGTTACATGTAGAACTTGA 2081 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 GAACAGGATATATATGCTCTTGTTGTTCATTAGTGTCAATATATATTGCTGTTCACTTGT 2141 consensus_14927#1 ------------------------------------------------------------ consensus_14927#0 GAAAAAAAAAAAAAAAAAAA 2161 consensus_14927#1 -------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||