These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14941#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1826 fasta sequence [CGAGGCGAGGATGTCGTGACGACGGAAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACCGCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCCTAGCCTCCGCCTCCGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC-GCCGT-CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG-CCGCCGCCGGCG-CCTCCGCTGGTGTGGTTGCG-GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT-TTACCAGCTTTGAGATGATTCACA-GGTTCCTTCTTGATGTATTCCCT-CCTTTACCTGAACAGCAACCCCAA-CCGCTGAAGCA-TTGA-TTGT-ACAAT-CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA-CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG-AAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGATTCGTTTTGTGATACTGAACTCAAATATGCCTTGGAGCAGACTGGCAGTTTTGTTATATAGGAGTACTATATATTTGCAATGGTCAAGTGTGAATATGCTGAACATG] [+] EMBL AK072064 [CGAGGCGAGGATGTCGTGACGACGGAAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACCGCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCCTAGCCTCCGCCTCGGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGT CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGTACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGATTCGTTTTGTGATACTGAACTCAAATATGCCTTGGAGCAGACTGGCAGTTTTGTTATATAGGAGTA ] [+] EMBL AK064069 [ GAGGCGAGGATGTCGTGACGACGGAAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACCGCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCCTAGCCTCCGCCTCCGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGT ATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGT CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGAT ] [+] EMBL CB665968 [ AAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACCGCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCCTAGCCTCCGCCTCCGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGA CCGCGTCTTCTCATCAGAGCCGCCAGGCCACCTCCGCCCGCGGGCTGGTCTGCCACG CCGGCGCGGGCG CCTC ] [+] EMBL CB650376 [ TCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGT CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCCACAAAT ] [+] EMBL CB650302 [ TCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGT CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAA ] [+] EMBL AU166579 [ TGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCCNGCCGTCCCGCGTCTTCGCAGCAGANCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCCCGCCGCCNGCGCCCTCCGCTNGTGTGGTTGCGNGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACNGCTGGCCCANGCT ] [-] EMBL CB650377 [ CACCACGCCACCTCCGCCCGCGGCCTGNTTTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCAGGGGCAAAAGTTGCTGCGTCAACCTTGCCA ATTCTtaaaaga ] [-] EMBL CB650303 [ ACCACGCCACCTCCGCCCGCGGCCTGNTTTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACAa ] [-] EMBL CB665969 [ CTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGT ] [-] EMBL CB670931 [ CTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGA ] [-] EMBL CB643686 [ TTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATT ] [-] EMBL BI305853 [ AGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATG ] [+] EMBL BQ908915 [ GGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACACCCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGAaaaa ] [+] EMBL BQ908260 [ CTCCTGCCGCAGTAATAACATGNTACCAGCTTTGAGATGATTCACAGGGTTCCTTCTTGATGTATTCCCT CCTTTACCTGNACAGCAACCCCAAGCCGCTGAAGCACTTGA TTGT ACAATGCCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGC ACAGGTAGCTACCCCTGAAAGCAC AATCATAGTGTAGGAC GTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGC ATGAGGAGGTATATGGGTTTAGGCCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAA ] [+] EMBL AU166578 [ CTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCNCA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTAaaaaaaa ] [-] EMBL CB636024 [ CAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGTTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGATTCGTTTTGTGATACTGAACTCAAATATGCCTTGGAGCAGACTGGCAGTTTTGTTATATAGGAGTACTATATATTTGCAATGGTCAAGTGTGAATATGCTGAACATG] [+] EMBL BI809286 [ CCTTCTTGATGTATTCCCTGCCTGGACCTGAACAGC ACCCC A CCGCTGAAGCA TTGAGTTGTGACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAA CCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGC ATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAGATACTATTATGTGGATAC ATAATTGCTCCATTCATTTTATTCCTCTTTTAaaaa ] consensusID : consensus_14941#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence [GTCTATCATATAGAGGGTTTGACCGGTTTCTACCCTGGATGTGCCACTAATCTGTTGCGGACCACTCCTGCCCCAGTAATAACCGTTTACCCGCTTTGAGATGATTCACCGGTTCCTTCTTGATGTATTCCCTCCTTTACCTGAGACCGCCACCCCCACCGCTGAAGCCTTGATTGTACCATCCTTGTGCCCCTATCCCTGTTGTCCCTGTTGAGTAGAAACCCCGTAAAACCCTCCCTGGACCCCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCCACCGGTAGCTACCCCTGAAAGCCCCAATCACTAGTGTAGGCCCGTAATTAGCCTTTCTGTGTGTATTATTACTTTTGATAGCCTCCCATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACCTGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAGATACTATTATGTGGATCCCATAA] [+] EMBL BI807392 [GTCTATCATATAGAGGGTTTGACCGGTTTCTACCCTGGATGTGCCACTAATCTGTTGCGGACCACTCCTGCCCCAGTAATAACCGTTTACCCGCTTTGAGATGATTCACCGGTTCCTTCTTGATGTATTCCCTCCTTTACCTGAGACCGCCACCCCCACCGCTGAAGCCTTGATTGTACCATCCTTGTGCCCCTATCCCTGTTGTCCCTGTTGAGTAGAAACCCCGTAAAACCCTCCCTGGACCCCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCCACCGGTAGCTACCCCTGAAAGCCCCAATCACTAGTGTAGGCCCGTAATTAGCCTTTCTGTGTGTATTATTACTTTTGATAGCCTCCCATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACCTGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAGATACTATTATGTGGATCCCATAA] consensusID : consensus_14941#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 474 fasta sequence [CGCGTCGCGGACGCGTGGCGACCTCGCCGGCGCCGCCCGCCGTCCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCCCCGCCGGCGCCTCCGCTGGTGTGGTTGCGGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACCATTGGAGGTAGTGTAATAATTGGAAGCTTACACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCATGATAGAAGTCATCACCTGTCCTTAGGGGCAATGTTATTGCTGCATCATGTGCTGGAGGTGCACTACTATTGCAACAATCCCCTTTGGGTTGTGAAAAAATAAAAA] [+] EMBL BI808516 [CGCGTCGCGGACGCGTGGCGACCTCGCCGGCGCCGCCCGCCGTCCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCCCCGCCGGCGCCTCCGCTGGTGTGGTTGCGGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACCATTGGAGGTAGTGTAATAATTGGAAGCTTACACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCATGATAGAAGTCATCACCTGTCCTTAGGGGCAATGTTATTGCTGCATCATGTGCTGGAGGTGCACTACTATTGCAACAATCCCCTTTGGGTTGTGAAAAAATAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14941#0 CGAGGCGAGGATGTCGTGACGACGGAAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACC 60 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 GCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCC 120 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 TAGCCTCCGCCTCCGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGA 180 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 CGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGG 240 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 CTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGC 300 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 GCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGAT 360 consensus_14941#2 ------------------------------------------------------CGCGTC 6 consensus_14941#1 ------------------------------------------------GTCTATCATATA 12 consensus_14941#0 GCCGG---GGGACGTGGCGACCTCGCCGGCGCCGGCGCCGCCGTCCGCGTC-TTCGCAGC 416 consensus_14941#2 GC--G---GACGCGTGGCGACCTCGCCGGCGCCGCC--CGCCGTCCGCGTC-TTCGCAGC 58 consensus_14941#1 GAGGGTTTGACCGGTTTCTACCCTGGATGTGCCACTAATCTGTTGCGGACCACTCCTGCC 72 * * * ** * *** * * *** * ** * ** * consensus_14941#0 AGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCCGCCGCCGGCGCCTCCG 476 consensus_14941#2 AGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCC-CCGCCGGCGCCTCCG 117 consensus_14941#1 CCAGTAATAACCGTTTACCCGCTT-TGAGATGATTCACCGGTTCCTTCTTGATGTATTCC 131 ** * ** **** * ** * ** * * * * * consensus_14941#0 CTGGTGTGGTTGCGGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGG 536 consensus_14941#2 CTGGTGTGGTTGCGGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGG 177 consensus_14941#1 CTCCTTTACCTGAGACCGCCACCCCCACCGCTGAAGCCTTGATTGTACCATCCTTGTGCC 191 ** * * ** * * ** * * * * **** * ** consensus_14941#0 TGCACGGCTG--GCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAG 594 consensus_14941#2 TGCACGGCTG--GCCCAAGCTCGCCACCGGCACCATTGGAGGTAGTGTAATAATTGGAAG 235 consensus_14941#1 CCTATCCCTGTTGTCCCTGTTGAGTAGAAACCCCGTAAAACCCTCCCTGGACCCCGTTTA 251 * *** * ** * * * * * * * * * consensus_14941#0 CTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGT-ATCGTGGTTTATCTCCAA 653 consensus_14941#2 CTTACA-CAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGT-ATCGTGGTTTATCTCCAA 293 consensus_14941#1 CCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCCACCGGTAGCTACCCCTGA 311 * * *** **** *** ** * **** * ** ** * * * consensus_14941#0 CTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAA 713 consensus_14941#2 CTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAA 353 consensus_14941#1 AAGCCCCAAT-CACTAGTGTAGGCCCGTAATTAGCCTTTCTGTGTGT-ATTATTACTTTT 369 * * ** * ** * * ** ****** * * * consensus_14941#0 GCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCA-AATGTTATTGCT 772 consensus_14941#2 GCTTGCTTTCTTCCA-TGATAGAAGTCATCACCTGTCCTTAGGGGCA-A-TGTTATTGCT 410 consensus_14941#1 GATAGCCTCCCATGA-GGAGGTATATGGGTTTAGGGCTGTGGGGACCTGGTGATTTTGGT 428 * * ** * * * ** * * * * * *** * ** * *** * consensus_14941#0 GCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACA 832 consensus_14941#2 GCATCATGTGCTGGAGGTGCA-CTACTATTGCAACAA-TCCCCTTTGGGTTGTGAAAAAA 468 consensus_14941#1 GGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAGATACTA--TTATGTGGATC 486 * **** * * ** ** ** * ** ** * consensus_14941#0 AGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCT 892 consensus_14941#2 TAAAAA------------------------------------------------------ 474 consensus_14941#1 CCATAA------------------------------------------------------ 492 * consensus_14941#0 TTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCC 952 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 TTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTAT 1012 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 CTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCT 1072 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 TCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCA 1132 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 AGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATC 1192 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 AGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTG 1252 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 TTGCGGACAACTCCTGCCGCAGTAATAACATTTACCAGCTTTGAGATGATTCACAGGTTC 1312 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 CTTCTTGATGTATTCCCTCCTTTACCTGAACAGCAACCCCAACCGCTGAAGCATTGATTG 1372 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 TACAATCCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATC 1432 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 CATGGACACCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACA 1492 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 GGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGT 1552 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 ATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATG 1612 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 GTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAAGATACTAT 1672 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 TATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGATTCGTTTTGTGAT 1732 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 ACTGAACTCAAATATGCCTTGGAGCAGACTGGCAGTTTTGTTATATAGGAGTACTATATA 1792 consensus_14941#2 ------------------------------------------------------------ consensus_14941#1 ------------------------------------------------------------ consensus_14941#0 TTTGCAATGGTCAAGTGTGAATATGCTGAACATG 1826 consensus_14941#2 ---------------------------------- consensus_14941#1 ---------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||