|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14941#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1826 fasta sequence
[CGAGGCGAGGATGTCGTGACGACGGAAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACCGCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCCTAGCCTCCGCCTCCGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC-GCCGT-CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG-CCGCCGCCGGCG-CCTCCGCTGGTGTGGTTGCG-GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT-TTACCAGCTTTGAGATGATTCACA-GGTTCCTTCTTGATGTATTCCCT-CCTTTACCTGAACAGCAACCCCAA-CCGCTGAAGCA-TTGA-TTGT-ACAAT-CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA-CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG-AAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGATTCGTTTTGTGATACTGAACTCAAATATGCCTTGGAGCAGACTGGCAGTTTTGTTATATAGGAGTACTATATATTTGCAATGGTCAAGTGTGAATATGCTGAACATG]
[+] EMBL AK072064 [CGAGGCGAGGATGTCGTGACGACGGAAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACCGCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCCTAGCCTCCGCCTCGGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGT CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGTACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGATTCGTTTTGTGATACTGAACTCAAATATGCCTTGGAGCAGACTGGCAGTTTTGTTATATAGGAGTA ]
[+] EMBL AK064069 [ GAGGCGAGGATGTCGTGACGACGGAAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACCGCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCCTAGCCTCCGCCTCCGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGT ATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGT CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGAT ]
[+] EMBL CB665968 [ AAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACCGCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCCTAGCCTCCGCCTCCGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGA CCGCGTCTTCTCATCAGAGCCGCCAGGCCACCTCCGCCCGCGGGCTGGTCTGCCACG CCGGCGCGGGCG CCTC ]
[+] EMBL CB650376 [ TCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGT CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCCACAAAT ]
[+] EMBL CB650302 [ TCCTGCTGCCGCGACGAGCGCGCCACGGACGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGGCTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGCGCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCC GCCGT CCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAA ]
[+] EMBL AU166579 [ TGTGTGTGTGGGGGAGTGATGCCGGGGGACGTGGCGACCTCGCCGGCGCCGGCGCCNGCCGTCCCGCGTCTTCGCAGCAGANCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCCCGCCGCCNGCGCCCTCCGCTNGTGTGGTTGCGNGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACNGCTGGCCCANGCT ]
[-] EMBL CB650377 [ CACCACGCCACCTCCGCCCGCGGCCTGNTTTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCAGGGGCAAAAGTTGCTGCGTCAACCTTGCCA ATTCTtaaaaga ]
[-] EMBL CB650303 [ ACCACGCCACCTCCGCCCGCGGCCTGNTTTGCCACG CCGCCGCCGGCG CCTCCGCTGGTGTGGTTGCG GCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAGCTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACAa ]
[-] EMBL CB665969 [ CTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGT ]
[-] EMBL CB670931 [ CTTAAAAGCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCAAATGTTATTGCTGCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACAAGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCTTTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGA ]
[-] EMBL CB643686 [ TTCGTGGACTGTACAGTGGACTTGTCCCTGCCTTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTATCTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCTTCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCAAGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATCAGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATT ]
[-] EMBL BI305853 [ AGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATG ]
[+] EMBL BQ908915 [ GGATGTGCAACTAATCTGTTGCGGACAACTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACACCCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGAaaaa ]
[+] EMBL BQ908260 [ CTCCTGCCGCAGTAATAACATGNTACCAGCTTTGAGATGATTCACAGGGTTCCTTCTTGATGTATTCCCT CCTTTACCTGNACAGCAACCCCAAGCCGCTGAAGCACTTGA TTGT ACAATGCCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGC ACAGGTAGCTACCCCTGAAAGCAC AATCATAGTGTAGGAC GTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGC ATGAGGAGGTATATGGGTTTAGGCCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAA ]
[+] EMBL AU166578 [ CTCCTGCCGCAGTAATAACAT TTACCAGCTTTGAGATGATTCNCA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGCTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTAaaaaaaa ]
[-] EMBL CB636024 [ CAT TTACCAGCTTTGAGATGATTCACA GGTTCCTTCTTGATGTATTCCCT CCTTTACCTGAACAGCAACCCCAA CCGTTGAAGCA TTGA TTGT ACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAAGATACTATTATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGATTCGTTTTGTGATACTGAACTCAAATATGCCTTGGAGCAGACTGGCAGTTTTGTTATATAGGAGTACTATATATTTGCAATGGTCAAGTGTGAATATGCTGAACATG]
[+] EMBL BI809286 [ CCTTCTTGATGTATTCCCTGCCTGGACCTGAACAGC ACCCC A CCGCTGAAGCA TTGAGTTGTGACAAT CCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAA CCAGTAAAACCATCCATGGACA CCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACAGGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGTATTATTACTTTTGATAGCATGC ATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATG AAAAAAAAAAGATACTATTATGTGGATAC ATAATTGCTCCATTCATTTTATTCCTCTTTTAaaaa ]
consensusID : consensus_14941#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence
[GTCTATCATATAGAGGGTTTGACCGGTTTCTACCCTGGATGTGCCACTAATCTGTTGCGGACCACTCCTGCCCCAGTAATAACCGTTTACCCGCTTTGAGATGATTCACCGGTTCCTTCTTGATGTATTCCCTCCTTTACCTGAGACCGCCACCCCCACCGCTGAAGCCTTGATTGTACCATCCTTGTGCCCCTATCCCTGTTGTCCCTGTTGAGTAGAAACCCCGTAAAACCCTCCCTGGACCCCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCCACCGGTAGCTACCCCTGAAAGCCCCAATCACTAGTGTAGGCCCGTAATTAGCCTTTCTGTGTGTATTATTACTTTTGATAGCCTCCCATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACCTGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAGATACTATTATGTGGATCCCATAA]
[+] EMBL BI807392 [GTCTATCATATAGAGGGTTTGACCGGTTTCTACCCTGGATGTGCCACTAATCTGTTGCGGACCACTCCTGCCCCAGTAATAACCGTTTACCCGCTTTGAGATGATTCACCGGTTCCTTCTTGATGTATTCCCTCCTTTACCTGAGACCGCCACCCCCACCGCTGAAGCCTTGATTGTACCATCCTTGTGCCCCTATCCCTGTTGTCCCTGTTGAGTAGAAACCCCGTAAAACCCTCCCTGGACCCCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCCACCGGTAGCTACCCCTGAAAGCCCCAATCACTAGTGTAGGCCCGTAATTAGCCTTTCTGTGTGTATTATTACTTTTGATAGCCTCCCATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACCTGGTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAGATACTATTATGTGGATCCCATAA]
consensusID : consensus_14941#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 474 fasta sequence
[CGCGTCGCGGACGCGTGGCGACCTCGCCGGCGCCGCCCGCCGTCCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCCCCGCCGGCGCCTCCGCTGGTGTGGTTGCGGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACCATTGGAGGTAGTGTAATAATTGGAAGCTTACACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCATGATAGAAGTCATCACCTGTCCTTAGGGGCAATGTTATTGCTGCATCATGTGCTGGAGGTGCACTACTATTGCAACAATCCCCTTTGGGTTGTGAAAAAATAAAAA]
[+] EMBL BI808516 [CGCGTCGCGGACGCGTGGCGACCTCGCCGGCGCCGCCCGCCGTCCGCGTCTTCGCAGCAGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCCCCGCCGGCGCCTCCGCTGGTGTGGTTGCGGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGGTGCACGGCTGGCCCAAGCTCGCCACCGGCACCATTGGAGGTAGTGTAATAATTGGAAGCTTACACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGTATCGTGGTTTATCTCCAACTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAAGCTTGCTTTCTTCCATGATAGAAGTCATCACCTGTCCTTAGGGGCAATGTTATTGCTGCATCATGTGCTGGAGGTGCACTACTATTGCAACAATCCCCTTTGGGTTGTGAAAAAATAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_14941#0 CGAGGCGAGGATGTCGTGACGACGGAAAAACGGAGCAGCCGAGGCGAGGAAGCCGCCACC 60
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 GCCACCGCCGCGACCCCAATGCGCGCGCCTCCCGCCGCCTCAGATCCCCACCCCTAACCC 120
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 TAGCCTCCGCCTCCGCCCCCGCCTCGCCGCCTCCTGCTGCCGCGACGAGCGCGCCACGGA 180
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 CGTCGCGGGCGACCCCCCGGAGGCGGATGCGATCGGGCGCCCTCGCGTAGCGCCCCCGGG 240
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 CTTCACCTTCTCCTAGGGGTAGGGGAGGGTAGCGGTGGCTGTAGCCCTAGACGCGGCGGC 300
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 GCGCGGTTCCGTGCCCTGAGGGAGGGGAGGAGCAGATCGGTGTGTGTGTGGGGGAGTGAT 360
consensus_14941#2 ------------------------------------------------------CGCGTC 6
consensus_14941#1 ------------------------------------------------GTCTATCATATA 12
consensus_14941#0 GCCGG---GGGACGTGGCGACCTCGCCGGCGCCGGCGCCGCCGTCCGCGTC-TTCGCAGC 416
consensus_14941#2 GC--G---GACGCGTGGCGACCTCGCCGGCGCCGCC--CGCCGTCCGCGTC-TTCGCAGC 58
consensus_14941#1 GAGGGTTTGACCGGTTTCTACCCTGGATGTGCCACTAATCTGTTGCGGACCACTCCTGCC 72
* * * ** * *** * * *** * ** * ** *
consensus_14941#0 AGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCCGCCGCCGGCGCCTCCG 476
consensus_14941#2 AGAGCCACCACGCCACCTCCGCCCGCGGCCTGCTCTGCCACGCC-CCGCCGGCGCCTCCG 117
consensus_14941#1 CCAGTAATAACCGTTTACCCGCTT-TGAGATGATTCACCGGTTCCTTCTTGATGTATTCC 131
** * ** **** * ** * ** * * * * *
consensus_14941#0 CTGGTGTGGTTGCGGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGG 536
consensus_14941#2 CTGGTGTGGTTGCGGCGACCTTCGTGTGCCCGCTCGATGTGATCAAGACGAGGTTTCAGG 177
consensus_14941#1 CTCCTTTACCTGAGACCGCCACCCCCACCGCTGAAGCCTTGATTGTACCATCCTTGTGCC 191
** * * ** * * ** * * * * **** * **
consensus_14941#0 TGCACGGCTG--GCCCAAGCTCGCCACCGGCACAATTGGAGGTAGTGTAATAATTGGAAG 594
consensus_14941#2 TGCACGGCTG--GCCCAAGCTCGCCACCGGCACCATTGGAGGTAGTGTAATAATTGGAAG 235
consensus_14941#1 CCTATCCCTGTTGTCCCTGTTGAGTAGAAACCCCGTAAAACCCTCCCTGGACCCCGTTTA 251
* *** * ** * * * * * * * * *
consensus_14941#0 CTTACAACAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGT-ATCGTGGTTTATCTCCAA 653
consensus_14941#2 CTTACA-CAGATTGCTCAGAGGGAAGGTTTTCGGGGAATGT-ATCGTGGTTTATCTCCAA 293
consensus_14941#1 CCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCCACCGGTAGCTACCCCTGA 311
* * *** **** *** ** * **** * ** ** * * *
consensus_14941#0 CTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAA 713
consensus_14941#2 CTATTCTGGCACTCTTGCCTAACTGGGCGGTCTATTTTACTGTGTATGAGCAGCTTAAAA 353
consensus_14941#1 AAGCCCCAAT-CACTAGTGTAGGCCCGTAATTAGCCTTTCTGTGTGT-ATTATTACTTTT 369
* * ** * ** * * ** ****** * * *
consensus_14941#0 GCTTGCTTTCTTCCAATGATAGAAGTCATCACCTGTCCTTAGGGGCA-AATGTTATTGCT 772
consensus_14941#2 GCTTGCTTTCTTCCA-TGATAGAAGTCATCACCTGTCCTTAGGGGCA-A-TGTTATTGCT 410
consensus_14941#1 GATAGCCTCCCATGA-GGAGGTATATGGGTTTAGGGCTGTGGGGACCTGGTGATTTTGGT 428
* * ** * * * ** * * * * * *** * ** * *** *
consensus_14941#0 GCATCATGTGCTGGAGGTGCAACTACTATTGCAACAAATCCACTTTGGGTTGTGAAGACA 832
consensus_14941#2 GCATCATGTGCTGGAGGTGCA-CTACTATTGCAACAA-TCCCCTTTGGGTTGTGAAAAAA 468
consensus_14941#1 GGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAGATACTA--TTATGTGGATC 486
* **** * * ** ** ** * ** ** *
consensus_14941#0 AGATTTCAGACCCAAGGGATACGAGCTGGGGTGATCCCGTACAAAGGTACACTTGCTGCT 892
consensus_14941#2 TAAAAA------------------------------------------------------ 474
consensus_14941#1 CCATAA------------------------------------------------------ 492
*
consensus_14941#0 TTGAAGAGAATAGCACATGAAGAAGGCATTCGTGGACTGTACAGTGGACTTGTCCCTGCC 952
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 TTGGCTGGTATCAGTCATGTTGCTATTCAGTTTCCTGCATATGAGAAGATCAAAGCTTAT 1012
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 CTGGCTGAGCGAGATAATACTACAGTGGAGGCATTAAGTTTTGGTGATGTTGCTGTTGCT 1072
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 TCATCCCTGGCAAAAGTTGCTGCGTCAACCTTGACATATCCTCATGAGGTTGTTCGCTCA 1132
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 AGGTTACAGGAGCAGGGAGCACACTCCAAGGCGAGATATACAGGTGTAATGGACTGCATC 1192
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 AGAAAGGTCTATCATATAGAGGGTTTGACCGGTTTCTACCGTGGATGTGCAACTAATCTG 1252
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 TTGCGGACAACTCCTGCCGCAGTAATAACATTTACCAGCTTTGAGATGATTCACAGGTTC 1312
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 CTTCTTGATGTATTCCCTCCTTTACCTGAACAGCAACCCCAACCGCTGAAGCATTGATTG 1372
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 TACAATCCTTGTGCCCCTATCCATGTTGTCACTGTTGAGTAGAAACCCAGTAAAACCATC 1432
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 CATGGACACCGTTTACCTTTGTTAGAAGGCTCTCCTAAAAGAGATTTTGATAATGCAACA 1492
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 GGTAGCTACCACTGAAAGCACAAATCATAGTGTAGGACAGTAATTAGCATTTCTGTGTGT 1552
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 ATTATTACTTTTGATAGCATGCAATGAGGAGGTATATGGGTTTAGGGCTGTGGGGACATG 1612
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 GTGATTTTGGTGGGGTATGTTGTCCGATGATGATGATGATGAAAAAAAAAAAGATACTAT 1672
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 TATGTGGATACAATAATTGCTCCATTCATTTTATTCCTCTTTTATGATTCGTTTTGTGAT 1732
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 ACTGAACTCAAATATGCCTTGGAGCAGACTGGCAGTTTTGTTATATAGGAGTACTATATA 1792
consensus_14941#2 ------------------------------------------------------------
consensus_14941#1 ------------------------------------------------------------
consensus_14941#0 TTTGCAATGGTCAAGTGTGAATATGCTGAACATG 1826
consensus_14941#2 ----------------------------------
consensus_14941#1 ----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||