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Oryza sativa
cluster # 1496 cluster # 1496       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1496#0 length = 1868 sequences # 2  

consensusID : consensus_1496#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1868
fasta sequence
                              [ATCCGTGGAACATCCTAATCCACATTTTTGCTATCTTCTCGCTGCGATCGCCACAAATTGACATGTATATGGTGACACGAATCGAATTCCTCTATAACGGCCATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAAGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGTGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCTGACGAACTCAACCTCGGACTTGTACGTCGGCGTATGGTACAACCAGATCCCCGTGCACACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAATGGTGGCGGCGGCGGCGGCGCCGTCTGGACGACGGCGAATTCGAACAACGTCGCCGCCGCCGGTGGTGGTGCTGGAGCGACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGGTCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCTCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGACCAACACCAGCTTCAAGCTGTATCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGACTACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCTCCCGGTTCCCCACCGGCTGTGACAAGTACGCCTCGTGCGGGCCCTTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGCTTCGTCCCCGTCGACAGCAGCCACGACGTCTCGAGAGGTTGCCGGAGGAAGGAGGAGGAGGTGGGATGCGTCGGCGGCGGCGGCGGCGATGGCTTCTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGATCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGCTAATAACAAGACGAAAAGTACTGTTCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGA]

[+] EMBL AK119282             [ATCCGTGGAACATCCTAATCCACATTTTTGCTATCTTCTCGCTGCGATCGCCACAAATTGACATGTATATGGTGACACGAATCGAATTCCTCTATAACGGCCATGGCGGCTTACCTTGCAGTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAAGCTTACACCTGCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGTGGCGGCGTCTTCGCTCTCGGCTTCTTCTCCCTGACGAACTCAACCTCGGACTTGTACGTCGGCGTATGGTACAACCAGATCCCCGTGCACACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCCGTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAATGGTGGCGGCGGCGGCGGCGCCGTCTGGACGACGGCGAATTCGAACAACGTCGCCGCCGCCGGTGGTGGTGCTGGAGCGACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGGTCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTCTCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGACCCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTCTGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGCGTGATCCAGACCAACACCAGCTTCAAGCTGTATCAGACGATCGACGGCGACATGGCCGACGGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGACTACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTCTCCCGGTTCCCCACCGGCTGTGACAAGTACGCCTCGTGCGGGCCCTTCGGCTACTGCGACGGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGCTTCGTCCCCGTCGACAGCAGCCACGACGTCTCGAGAGGTTGCCGGAGGAAGGAGGAGGAGGTGGGATGCGTCGGCGGCGGCGGCGGCGATGGCTTCTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTGTACGTGAGGAACAGAAGCTTCGATCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGCTAATAACAAGACGAAAAGTACTGTTCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGA]
[+] EMBL CB649794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTGACGAACAGAAGCTTCGATCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGCACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGCTTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAGAACCTCTACCTCCGGATTCCTGGCTCACGAGCTAATAACAAGACGAAAAGTACTGTTCTGAAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTACGCAAATCAAGAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACACATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGATTCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGCAAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTACAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTCATCTACGA]


>consensus_1496#0 ATCCGTGGAACATCCTAATCCACATTTTTGCTATCTTCTCGCTGCGATCGCCACAAATTG ACATGTATATGGTGACACGAATCGAATTCCTCTATAACGGCCATGGCGGCTTACCTTGCA GTGTTTGTGTTCCTGCTTCTTGTTTGTTCGTCATGCAGAGCTGATGACAAGCTTACACCT GCAAGGCCGCTCTCCCCCGGCGACGAGCTCATCTCCAGTGGCGGCGTCTTCGCTCTCGGC TTCTTCTCCCTGACGAACTCAACCTCGGACTTGTACGTCGGCGTATGGTACAACCAGATC CCCGTGCACACCTACGTGTGGGTCGCCAACCGCAACACCCCGATCAAGAAGAGCTCCTCC GTGAAGCTGGTCTTGACCAACGATTCCGACCTCGTGCTGTCCGACTCCAATGGTGGCGGC GGCGGCGGCGCCGTCTGGACGACGGCGAATTCGAACAACGTCGCCGCCGCCGGTGGTGGT GCTGGAGCGACGGCTGTGCTGCTCGACTCCGGCAACTTCGTCGTGCGGCTGCCGAACGGG TCTGAGGTATGGCGGAGCTTCGATCACCCGACGGACACCATCGTGCCCAACGTGAGTTTC TCGCTGAGCTACATGGCCAACAGCTTAGACCGCATCGTCGCGTGGAGGGGGCCCAACGAC CCGTCCGCCGGCGACTTCACCATGGGCGGCGACTCCAGCTCGGACCTCCAGATCGTCGTC TGGAACGGGACGAGGCCGTACTGGCGACGAGCGGCGTGGACCGGCGCGTCCATCTTCGGC GTGATCCAGACCAACACCAGCTTCAAGCTGTATCAGACGATCGACGGCGACATGGCCGAC GGCTACTCCTTCAAGCTGACCGTCGCCGACGGCTCGCCGCCGATGCGCATGACGCTGGAC TACACCGGCGAGCTCACCTTCCAGAGCTGGGACGGCAACACGTCGTCGTGGACCGTCTTC TCCCGGTTCCCCACCGGCTGTGACAAGTACGCCTCGTGCGGGCCCTTCGGCTACTGCGAC GGCATCGGCGCCACGGCGACTCCGACGTGCAAGTGCCTCGACGGCTTCGTCCCCGTCGAC AGCAGCCACGACGTCTCGAGAGGTTGCCGGAGGAAGGAGGAGGAGGTGGGATGCGTCGGC GGCGGCGGCGGCGATGGCTTCTTGACCATGCCGAGCATGAGGACACCGGACAAGTTCTTG TACGTGAGGAACAGAAGCTTCGATCAGTGCACCGCAGAGTGCAGCCGCAACTGCTCCTGC ACGGCTTATGCTTATGCAATCCTGAATAATGCCGATGCGACGGAGGACCGGTCCAGGTGC TTGGTTTGGATGGGGGAGCTCGTCGACACGGGCAAGTTCAGCGATGGTGCCGGCGGCGAG AACCTCTACCTCCGGATTCCTGGCTCACGAGCTAATAACAAGACGAAAAGTACTGTTCTG AAGATTGTACTGCCGGTTGCGGCTGGTCTTCTGCTGATACTTGGAGGCATATGTCTTGTA CGCAAATCAAGAGGCAATCAACCAAGCAAGAAAGTTCAGAGCAAATATCCATTTCAACAC ATGAATGATTCAAACGAAGTTGGGAGCGAAAATGTAGAACTTTCTTCTGTTGACTTGGAT TCTGTCCTCACTGCAACAAACAATTTCTCCGATTACAACTTGCTTGGAAAAGGAGGTTTT GGAAAAGTTTACAAGGGAGTTTTGGAGGGTGGCATAGAAGTTGCTGTCAAGAGGCTTAGC AAGGGTTCAGGGCAAGGTGTTGAGGAGTTCAGAAATGAAGTGGTTCTGATTGCTAAATTA CAACACAGAAACTTGGTTAGGCTTCTTGGTTGCTGCATTCATGAAGACGAAAAGTTACTC ATCTACGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)