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Oryza sativa
cluster # 14971 cluster # 14971       Sequences # 19       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_14971#0 length = 1219 sequences # 18  
consensus_14971#1 length = 429 sequences # 1  

consensusID : consensus_14971#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 18
consensus length = 1219
fasta sequence
                              [CTTTGGACGTTTCCCCATCCAGAAAAAAAAATCTTCTCAGTTACAGGATCCATCCTTAGGTGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCC-TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA-CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT-CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC-AAGAC-GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG-TTGAAGGAGAAGAATAAGCAATT-AGGACATATTAC-TTGTAATTAGTGCATCAGTATTCATGAACAT-GGAGGTGTGATGAGTTGTAACGAGGCATCTT-CTCGGATAAAT-AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA--AAAAATCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGTGATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATTTGTTGGAACCAAAAAAAAAAAAA]

[+] EMBL AK067495             [CTTTGGACGTTTCCCCATCCAGAAAAAAAAATCTTCTCAGTTACAGGATCCATCCTTAGGTGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGT                                                                                                                                                          ]
[+] EMBL CF296144             [                           AAAATCTTCTCAGTTACAGGATCCATCCTTAGGTGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCCTTTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK062568             [                                                                      AAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA  TCAATTCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGTGATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATT                       ]
[+] EMBL CF297347             [                                                                                           CAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF292417             [                                                                                           CAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAG ATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGACATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTGTTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF297828             [                                                                                           CAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF197111             [                                                                                                                   CTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGNGNNNNTGC AAGACngnnngc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU070385             [                                                                                                                        TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF297073             [                                                                                                                         TTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL OS37924              [                                                                                                                                       ACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGACCACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB682430             [                                                                                                                                                                                                                                                                                 CTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA  AAAAAaagg                                                                                                                                ]
[+] EMBL AT003400             [                                                                                                                                                                                                                                                                                                                                                                                        aggttaaTGAAAGAACCCTTGNGTNTTAAGAA GAAAACATTTTTNC ATTCTTGATGTCAGCCCAGAAG GG CCTTAAAAAGGCTCAC CCCCCGGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGG CAGCATGGGATATTGC AAG C GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTAGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCATCAAAAAaaaaaaaa                                                                                                                            ]
[-] EMBL CF293683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCAGTAGCGGACTTTAAAGAGGCTCATCCCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA  AAAAA                                                                                                                                    ]
[+] EMBL C73811               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTGTTTGAAGGAGAAGATTAAGCCATTAAGGACATATTACTTTGTAATTAGTGCATCAGTATCCATGAACATGGGAGGTNTGATGAGTTGTAACGAGGCATCTTCCCCGGNTAAATAAGGGCCCTAG TTGAACCTTTC                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CF297829             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATAAAGGAATGGACAGCATGGGATA TGCAAAGACGGGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCGTGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCT ATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA  TCAAA                                                                                                                                    ]
[-] EMBL CA760219             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATCCAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGGGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGG TACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAATGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATTGATAAGTATGATAGAACAAGCA  TCAATTCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGTGATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATTTGTTGGAACCAAAAAAAAAAAAA]
[-] EMBL CF292418             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTGTTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTATTGGTCCTGAATGGATACAAGAATGTGTTCCATCTGAAAGAAGGACTCTACACA AAAAAAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGAAAATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGG                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CF296145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGACCAAGCA  AAAAA                                                                                                                                    ]


>consensus_14971#0 CTTTGGACGTTTCCCCATCCAGAAAAAAAAATCTTCTCAGTTACAGGATCCATCCTTAGG TGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCCT TTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCT CATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGG CTGCAAAACTCTGCCGGACACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAA AGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAA AGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTG CAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCATCCACCTGGTGCCGTTA ATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGCAAGACGGGCAG CATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTG TTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACAT TGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACT TGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGT TCAAGGAAGGCCTACCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGT AATTAGTGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATCTTCT CGGATAAATAGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCC TTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTT GTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAG CAAAAAATCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGT GATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATTTGTT GGAACCAAAAAAAAAAAAA



consensusID : consensus_14971#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 429
fasta sequence
                              [GTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGACCATTGAAACCAACACAGAACTTTCTTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATTTGGATGGAGGACTTTACACATGGTTCAAGGAAGGCCTCCCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGTAATTAGGGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATTTTTTGGGATAAATAGGGCACTAGTTTGACCCTTTTTTTTTCCTTTCCCAAAAGGATATGCCTCCTTGGCCCTCCGGCCTATATGAAAATGTGTTAGATTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF297072             [GTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGACCATTGAAACCAACACAGAACTTTCTTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATTTGGATGGAGGACTTTACACATGGTTCAAGGAAGGCCTCCCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGTAATTAGGGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATTTTTTGGGATAAATAGGGCACTAGTTTGACCCTTTTTTTTTCCTTTCCCAAAAGGATATGCCTCCTTGGCCCTCCGGCCTATATGAAAATGTGTTAGATTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_14971#1 GTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAC CATTGAAACCAACACAGAACTTTCTTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTT ACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATTTGGATGGAGGACTTTACACAT GGTTCAAGGAAGGCCTCCCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACT TGTAATTAGGGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATTT TTTGGGATAAATAGGGCACTAGTTTGACCCTTTTTTTTTCCTTTCCCAAAAGGATATGCC TCCTTGGCCCTCCGGCCTATATGAAAATGTGTTAGATTTTTCAAAAAAAAAAAAAAAAAA AAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_14971#0      CTTTGGACGTTTCCCCATCCAGAAAAAAAAATCTTCTCAGTTACAGGATCCATCCTTAGG 60
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      TGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCCT 120
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      TTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCT 180
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      CATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGG 240
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      CTGCAAAACTCTGCCGGACACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAA 300
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      AGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAA 360
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      AGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTG 420
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      CAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCATCCACCTGGTGCCGTTA 480
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      ATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGCAAGACGGGCAG 540
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      CATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTG 600
consensus_14971#1      ---------------------------------------------------------GTG 3
                                                                                ***

consensus_14971#0      TTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACAT 660
consensus_14971#1      TTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGACCAT 63
                       ******************************************************** ***

consensus_14971#0      TGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACT 720
consensus_14971#1      TGAAACCAACACAGAACTTTCTTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACT 123
                       ********************* **************************************

consensus_14971#0      TGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGT 780
consensus_14971#1      TGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATTTGGATGGAGGACTTTACACATGGT 183
                       *********************************** ************* **********

consensus_14971#0      TCAAGGAAGGCCTACCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGT 840
consensus_14971#1      TCAAGGAAGGCCTCCCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGT 243
                       ************* **********************************************

consensus_14971#0      AATTAGTGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATCTTCT 900
consensus_14971#1      AATTAGGGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATTTTTT 303
                       ****** ************************************************ ** *

consensus_14971#0      CGGATAAATAGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCC 960
consensus_14971#1      GGGATAAATAGGGCACTAGTTTGACCCTTTTTTTTTCCTTTCCCAAAAGGATATGCCTCC 363
                        ********** ************ ***** ** **************************

consensus_14971#0      TTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTT 1020
consensus_14971#1      TTGGCCCTCCGGCCTATATGAAAATGTGTTAGATTTTTCAAAAAAAAAAAAAAAAAAAAA 423
                       **** ***** *********** ************* ***  *             *   

consensus_14971#0      GTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAG 1080
consensus_14971#1      AAAAAA------------------------------------------------------ 429
                                                                                   

consensus_14971#0      CAAAAAATCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGT 1140
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      GATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATTTGTT 1200
consensus_14971#1      ------------------------------------------------------------
                                                                                   

consensus_14971#0      GGAACCAAAAAAAAAAAAA 1219
consensus_14971#1      -------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)