These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_14971#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1219 fasta sequence [CTTTGGACGTTTCCCCATCCAGAAAAAAAAATCTTCTCAGTTACAGGATCCATCCTTAGGTGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCC-TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA-CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT-CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC-AAGAC-GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG-TTGAAGGAGAAGAATAAGCAATT-AGGACATATTAC-TTGTAATTAGTGCATCAGTATTCATGAACAT-GGAGGTGTGATGAGTTGTAACGAGGCATCTT-CTCGGATAAAT-AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA--AAAAATCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGTGATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATTTGTTGGAACCAAAAAAAAAAAAA] [+] EMBL AK067495 [CTTTGGACGTTTCCCCATCCAGAAAAAAAAATCTTCTCAGTTACAGGATCCATCCTTAGGTGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGT ] [+] EMBL CF296144 [ AAAATCTTCTCAGTTACAGGATCCATCCTTAGGTGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCCTTTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACC ] [+] EMBL AK062568 [ AAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA TCAATTCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGTGATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATT ] [+] EMBL CF297347 [ CAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAA ] [+] EMBL CF292417 [ CAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAG ATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGACATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTGTTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTATTG ] [+] EMBL CF297828 [ CAGAGTCCTCCATAGTTCTTTCTGCTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGC ] [+] EMBL CF197111 [ CTCC TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGNGNNNNTGC AAGACngnnngc ] [+] EMBL AU070385 [ TTTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTA ] [+] EMBL CF297073 [ TTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGA CACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATT ] [+] EMBL OS37924 [ ACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCTCATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGGCTGCAAAACTCTGCCGGACCACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTg ] [-] EMBL CB682430 [ CTCGCTGCAGATAACCTGTACTGCCACAAAGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAAAGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTGCAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCAT CCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA AAAAAaagg ] [+] EMBL AT003400 [ aggttaaTGAAAGAACCCTTGNGTNTTAAGAA GAAAACATTTTTNC ATTCTTGATGTCAGCCCAGAAG GG CCTTAAAAAGGCTCAC CCCCCGGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGG CAGCATGGGATATTGC AAG C GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTAGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCATCAAAAAaaaaaaaa ] [-] EMBL CF293683 [ CCAGTAGCGGACTTTAAAGAGGCTCATCCCACCTGGTGCCGTTAATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA AAAAA ] [+] EMBL C73811 [ AGATTGATAAAGGAATGGACAGCATGGGATATTGC AAGAC GGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTGTTTGAAGGAGAAGATTAAGCCATTAAGGACATATTACTTTGTAATTAGTGCATCAGTATCCATGAACATGGGAGGTNTGATGAGTTGTAACGAGGCATCTTCCCCGGNTAAATAAGGGCCCTAG TTGAACCTTTC ] [-] EMBL CF297829 [ GATAAAGGAATGGACAGCATGGGATA TGCAAAGACGGGGCAGCATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCGTGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCT ATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAGCA TCAAA ] [-] EMBL CA760219 [ TGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATCCAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGGGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGG TACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGTTCAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAATGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATTGATAAGTATGATAGAACAAGCA TCAATTCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGTGATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATTTGTTGGAACCAAAAAAAAAAAAA] [-] EMBL CF292418 [ CCTGAGTTCATACAAAGTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTGTTGTGGCATGTTCGACAGGAGGAACATTGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTATTGGTCCTGAATGGATACAAGAATGTGTTCCATCTGAAAGAAGGACTCTACACA AAAAAAAGGAAGGCCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGAAAATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGG ] [-] EMBL CF296145 [ CCTACCGGCTG TTGAAGGAGAAGAATAAGCAATT AGGACATATTAC TTGTAATTAGTGCATCAGTATTCATGAACAT GGAGGTGTGATGAGTTGTAACGAGGCATCTT CTCGGATAAAT AGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCCTTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTTGTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGACCAAGCA AAAAA ] consensusID : consensus_14971#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 429 fasta sequence [GTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGACCATTGAAACCAACACAGAACTTTCTTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATTTGGATGGAGGACTTTACACATGGTTCAAGGAAGGCCTCCCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGTAATTAGGGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATTTTTTGGGATAAATAGGGCACTAGTTTGACCCTTTTTTTTTCCTTTCCCAAAAGGATATGCCTCCTTGGCCCTCCGGCCTATATGAAAATGTGTTAGATTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA] [-] EMBL CF297072 [GTGTTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGACCATTGAAACCAACACAGAACTTTCTTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACTTGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATTTGGATGGAGGACTTTACACATGGTTCAAGGAAGGCCTCCCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGTAATTAGGGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATTTTTTGGGATAAATAGGGCACTAGTTTGACCCTTTTTTTTTCCTTTCCCAAAAGGATATGCCTCCTTGGCCCTCCGGCCTATATGAAAATGTGTTAGATTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_14971#0 CTTTGGACGTTTCCCCATCCAGAAAAAAAAATCTTCTCAGTTACAGGATCCATCCTTAGG 60 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 TGTTAGAGGCAAACCCCTCTTCTAATTCTCTCAGAGTCCTCCATAGTTCTTTCTGCTCCT 120 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 TTTTTCTCATGACCACAATGCTTGCAGCTAGCTCTGTAGTGAACAGCAACCTTCCTTGCT 180 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 CATCAAGGATATCCTCCTGCTCAGACTTCACATCTGGCTACTCCTGGCGTCCTATAGAGG 240 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 CTGCAAAACTCTGCCGGACACGAGCTGTGCGCTCGCTGCAGATAACCTGTACTGCCACAA 300 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 AGCCTGCAAAGTCACCAGCTGAAGAAGAATGGAAGATCAAGAGGCAAGTGCTAGTAGAAA 360 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 AGCGGGTCCGTAGTGTTGATGTGAAGGAAGCACTGCGTCTTCAGAAGGAAAACAATTTTG 420 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 CAATTCTTGATGTCAGGCCAGTAGCGGACTTTAAAGAGGCTCATCCACCTGGTGCCGTTA 480 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 ATGTGCAAATATATAGATTGATAAAGGAATGGACAGCATGGGATATTGCAAGACGGGCAG 540 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 CATTTGCATTCTTTGGCATATTTTCTGGAACAGAAGAGAATCCTGAGTTCATACAAAGTG 600 consensus_14971#1 ---------------------------------------------------------GTG 3 *** consensus_14971#0 TTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGAACAT 660 consensus_14971#1 TTGATGAGAAACTTGGTAAAGATGCAAAGATTATTGTGGCATGTTCGACAGGAGGACCAT 63 ******************************************************** *** consensus_14971#0 TGAAACCAACACAGAACTTTCCTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACT 720 consensus_14971#1 TGAAACCAACACAGAACTTTCTTGATGGGAAGCAATCGAGGTCCCTGATAGCAGCTTACT 123 ********************* ************************************** consensus_14971#0 TGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATCTGGATGGAGGACTCTACACATGGT 780 consensus_14971#1 TGTTGGTCCTGAATGGTTACAAGAATGTGTTCCATTTGGATGGAGGACTTTACACATGGT 183 *********************************** ************* ********** consensus_14971#0 TCAAGGAAGGCCTACCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGT 840 consensus_14971#1 TCAAGGAAGGCCTCCCGGCTGTTGAAGGAGAAGAATAAGCAATTAGGACATATTACTTGT 243 ************* ********************************************** consensus_14971#0 AATTAGTGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATCTTCT 900 consensus_14971#1 AATTAGGGCATCAGTATTCATGAACATGGAGGTGTGATGAGTTGTAACGAGGCATTTTTT 303 ****** ************************************************ ** * consensus_14971#0 CGGATAAATAGTGCACTAGTTTGATCCTTTCTTCTTCCTTTCCCAAAAGGATATGCCTCC 960 consensus_14971#1 GGGATAAATAGGGCACTAGTTTGACCCTTTTTTTTTCCTTTCCCAAAAGGATATGCCTCC 363 ********** ************ ***** ** ************************** consensus_14971#0 TTGGACCTCCTGCCTATATGAAGATGTGTTAGATTTCTCATGACCTGCTGCTGTCGACTT 1020 consensus_14971#1 TTGGCCCTCCGGCCTATATGAAAATGTGTTAGATTTTTCAAAAAAAAAAAAAAAAAAAAA 423 **** ***** *********** ************* *** * * consensus_14971#0 GTCGGTGTATGATACTTGAGCATGCCCATTTGACAAAATAGATAAGTATGTTAGAACAAG 1080 consensus_14971#1 AAAAAA------------------------------------------------------ 429 consensus_14971#0 CAAAAAATCTCTCGGATCTTGGACTTGGAATGCACTATGAACTTTACAACATGATGTTGT 1140 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 GATCCAGCCATCAGTGATGTCAAGCAGTAAAACTTAGTCAATGCCAGATACTTATTTGTT 1200 consensus_14971#1 ------------------------------------------------------------ consensus_14971#0 GGAACCAAAAAAAAAAAAA 1219 consensus_14971#1 ------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||